Psyllid ID: psy10463
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 605 | 2.2.26 [Sep-21-2011] | |||||||
| Q9Y117 | 667 | Polypeptide N-acetylgalac | no | N/A | 0.667 | 0.605 | 0.460 | 1e-119 | |
| Q6WV17 | 630 | Polypeptide N-acetylgalac | yes | N/A | 0.656 | 0.630 | 0.506 | 1e-119 | |
| Q29121 | 559 | Polypeptide N-acetylgalac | yes | N/A | 0.677 | 0.733 | 0.455 | 1e-113 | |
| Q07537 | 559 | Polypeptide N-acetylgalac | yes | N/A | 0.677 | 0.733 | 0.455 | 1e-112 | |
| O08912 | 559 | Polypeptide N-acetylgalac | yes | N/A | 0.677 | 0.733 | 0.450 | 1e-112 | |
| Q10473 | 559 | Polypeptide N-acetylgalac | yes | N/A | 0.674 | 0.729 | 0.450 | 1e-112 | |
| Q6UE39 | 556 | Polypeptide N-acetylgalac | no | N/A | 0.671 | 0.730 | 0.460 | 1e-112 | |
| Q10472 | 559 | Polypeptide N-acetylgalac | yes | N/A | 0.677 | 0.733 | 0.448 | 1e-112 | |
| Q8CF93 | 556 | Polypeptide N-acetylgalac | no | N/A | 0.671 | 0.730 | 0.460 | 1e-111 | |
| Q8IUC8 | 556 | Polypeptide N-acetylgalac | no | N/A | 0.671 | 0.730 | 0.456 | 1e-111 |
| >sp|Q9Y117|GALT3_DROME Polypeptide N-acetylgalactosaminyltransferase 3 OS=Drosophila melanogaster GN=pgant3 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/471 (46%), Positives = 286/471 (60%), Gaps = 67/471 (14%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
LP +S++IVFHNEAWS LLRT+ SVI+RSPR +LKEI+LVDDAS R +LK L+ YV L
Sbjct: 149 LPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVL 208
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
+VPTR+ R R GL+ ARLLGA A G++L FLDAHCEC+ GWLE L++R+ E R V+
Sbjct: 209 AVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVI 268
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD-----AIIKRKDFTEPFKTP 371
CPVIDIISD F+Y ++FE HWGAFNW+L FRW+ SSD A KD T+P TP
Sbjct: 269 CPVIDIISDDNFSYTKTFENHWGAFNWQLSFRWF---SSDRKRQTAGNSSKDSTDPIATP 325
Query: 372 AMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431
MAGGLFAIDR YF+ +G+YD M+VWGGEN+EMSFR+WQCGG +EI+PCSHV H+FR +
Sbjct: 326 GMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSS 385
Query: 432 SPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAE-KQRDKQAVRSRLELRKQLK 490
+PY+FPGG+SEVL NLAR A VWMD+W F + +DK V R+ LR++L+
Sbjct: 386 TPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRERLQ 445
Query: 491 CHSFKWYLTHVWPHHFLPMDDKFFGRI--------------RHVQT-------------- 522
C F WYL ++WP HF P D+FFG+I +H++
Sbjct: 446 CKPFSWYLENIWPEHFFPAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSREWKRAF 505
Query: 523 ------------------HKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTD 564
KC+ +PL + + ++ CT MFV+ P
Sbjct: 506 EEIDSKAEELMALIDLERDKCL-RPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVIT-PKG 563
Query: 565 LIATDESVCLDVPEYE----------NDISPRVRILACSGFNRQRWTYDKE 605
I T+++VCL + + N + V + C+ + Q WTYD +
Sbjct: 564 QIMTNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCASDSSQLWTYDMD 614
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Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers EA2 as substrate. Has weak activity toward Muc5AC-3, -13 and -3/13 substrates. Drosophila melanogaster (taxid: 7227) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|Q6WV17|GALT5_DROME Polypeptide N-acetylgalactosaminyltransferase 5 OS=Drosophila melanogaster GN=pgant5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 272/409 (66%), Gaps = 12/409 (2%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
LP +SIVIVFHNEAW+ LLRTV SVI+RSPR++LKEI+LVDDAS R+FL L+EYVAKL
Sbjct: 186 LPTTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLEEYVAKL 245
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
V T V+R+ R GLI+ARLLGA GE++ FLDAHCECT GWLE L+AR+ ++R VV
Sbjct: 246 PVKTFVLRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVV 305
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGG 376
CP+ID+ISD TF Y+ + + WG FNW+L+FRWY S + + D T P +TP MAGG
Sbjct: 306 CPIIDVISDETFEYITASDSTWGGFNWKLNFRWYRVPSREMARRNNDRTAPLRTPTMAGG 365
Query: 377 LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSF 436
LF+ID+ YF+ IG+YDE M +WGGENLEMSFR+WQCGG +EI PCSHV H+FR SPY+F
Sbjct: 366 LFSIDKDYFYEIGSYDEGMDIWGGENLEMSFRIWQCGGILEIIPCSHVGHVFRDKSPYTF 425
Query: 437 PGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKW 496
PGGV++++ N ARVA VW+DEW +FY+ + A K V R LR +LKC SF+W
Sbjct: 426 PGGVAKIVLHNAARVAEVWLDEWRDFYYSMSTGARKA-SAGDVSDRKALRDRLKCKSFRW 484
Query: 497 YLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQM 556
YL +V+P +P+D + G IR+ +T C++ +M + + H Q+
Sbjct: 485 YLENVYPESLMPLDYYYLGEIRNAETETCLD------TMGRKYNEKVGISYCHGLGGNQV 538
Query: 557 FVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQRWTYDKE 605
F +++ D +CLD ++ VR G Q W YD E
Sbjct: 539 FAYTKRQQIMSDD--LCLDASSSNGPVN-MVRCHNMGG--NQEWVYDAE 582
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Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers EA2 as substrate. Drosophila melanogaster (taxid: 7227) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q29121|GALT1_PIG Polypeptide N-acetylgalactosaminyltransferase 1 OS=Sus scrofa GN=GALNT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/446 (45%), Positives = 275/446 (61%), Gaps = 36/446 (8%)
Query: 188 CTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKS 247
C + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR ML+EI+LVDDAS R+FLK
Sbjct: 106 CKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKR 165
Query: 248 SLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307
L+ YV KL VP VIR R GLI+ARL GA ++G+++ FLDAHCECT+GWLE L+AR
Sbjct: 166 PLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLAR 225
Query: 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEP 367
+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 IKHDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLP 285
Query: 368 FKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427
+TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV H+
Sbjct: 286 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 345
Query: 428 FRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRK 487
FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SRL LR
Sbjct: 346 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKTFFYIISPGVTKV-DYGDISSRLGLRH 404
Query: 488 QLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS------------- 534
+L+C F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 KLQCRPFSWYLENIYPDSQIPRHYSSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGG 464
Query: 535 --------------------MNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCL 574
+++ +GP ++L C HL + L + + CL
Sbjct: 465 NQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCL 524
Query: 575 DVPEYENDISPRVRILACSGFNRQRW 600
D E+ P +R CSG Q+W
Sbjct: 525 DKATEEDSQVPSIR--DCSGSRSQQW 548
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Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7. Sus scrofa (taxid: 9823) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q07537|GALT1_BOVIN Polypeptide N-acetylgalactosaminyltransferase 1 OS=Bos taurus GN=GALNT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/446 (45%), Positives = 275/446 (61%), Gaps = 36/446 (8%)
Query: 188 CTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKS 247
C + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR ML+EI+LVDDAS R+FLK
Sbjct: 106 CKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKR 165
Query: 248 SLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307
L+ YV KL VP VIR R GLI+ARL GA ++G+++ FLDAHCECT+GWLE L+AR
Sbjct: 166 PLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLAR 225
Query: 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEP 367
+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 IKHDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLP 285
Query: 368 FKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427
+TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV H+
Sbjct: 286 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 345
Query: 428 FRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRK 487
FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SRL LR
Sbjct: 346 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKV-DYGDISSRLGLRH 404
Query: 488 QLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS------------- 534
+L+C F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 KLQCRPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGG 464
Query: 535 --------------------MNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCL 574
+++ +GP ++L C HL + L + + CL
Sbjct: 465 NQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCL 524
Query: 575 DVPEYENDISPRVRILACSGFNRQRW 600
D E+ P +R CSG Q+W
Sbjct: 525 DKATDEDSQVPSIR--DCSGSRSQQW 548
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Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7. Bos taurus (taxid: 9913) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|O08912|GALT1_MOUSE Polypeptide N-acetylgalactosaminyltransferase 1 OS=Mus musculus GN=Galnt1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/446 (45%), Positives = 274/446 (61%), Gaps = 36/446 (8%)
Query: 188 CTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKS 247
C + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR M++EI+LVDDAS R+FLK
Sbjct: 106 CKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR 165
Query: 248 SLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307
L+ YV KL VP VIR R GLI+ARL GA + G+++ FLDAHCECT GWLE L+AR
Sbjct: 166 PLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLAR 225
Query: 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEP 367
+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 IKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLP 285
Query: 368 FKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427
+TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV H+
Sbjct: 286 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 345
Query: 428 FRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRK 487
FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SRL LR+
Sbjct: 346 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKV-DYGDISSRLGLRR 404
Query: 488 QLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS------------- 534
+L+C F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 KLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGG 464
Query: 535 --------------------MNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCL 574
+++ +GP ++L C HL + L + + CL
Sbjct: 465 NQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCL 524
Query: 575 DVPEYENDISPRVRILACSGFNRQRW 600
D E+ P +R C+G Q+W
Sbjct: 525 DKATEEDSQVPSIR--DCTGSRSQQW 548
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Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q10473|GALT1_RAT Polypeptide N-acetylgalactosaminyltransferase 1 OS=Rattus norvegicus GN=Galnt1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/448 (45%), Positives = 280/448 (62%), Gaps = 40/448 (8%)
Query: 188 CTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKS 247
C + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR M++EI+LVDDAS R+FLK
Sbjct: 106 CKTKVYPDSLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR 165
Query: 248 SLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307
L+ YV KL VP VIR R GLI+ARL GA ++G+++ FLDAHCECT+GWLE L+AR
Sbjct: 166 PLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLAR 225
Query: 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEP 367
+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 IKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLP 285
Query: 368 FKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427
+TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV H+
Sbjct: 286 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 345
Query: 428 FRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRK 487
FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SR+ LR
Sbjct: 346 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKV-DYGDISSRVGLRH 404
Query: 488 QLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS------------- 534
+L+C F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 KLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGG 464
Query: 535 --------------------MNQASGPASLLPCTHLP--VLTQMFVMKLPTDLIATDESV 572
+++ +GP ++L C HL L + +KL + +++
Sbjct: 465 NQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQ-- 522
Query: 573 CLDVPEYENDISPRVRILACSGFNRQRW 600
CLD E+ P +R C+G Q+W
Sbjct: 523 CLDKATEEDSQVPSIR--DCTGSRSQQW 548
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q6UE39|GLT13_RAT Polypeptide N-acetylgalactosaminyltransferase 13 OS=Rattus norvegicus GN=Galnt13 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/447 (46%), Positives = 280/447 (62%), Gaps = 41/447 (9%)
Query: 189 TLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS 248
T V+ +E LP +S+VIVFHNEAWS LLRTV+SVI+RSP +L E++LVDDAS R+FLK +
Sbjct: 107 TKVYPDE-LPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLT 165
Query: 249 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308
L+ YV L VP ++IR R GLI+ARL GA ++G+++ FLDAHCECTLGWLE L+AR+
Sbjct: 166 LENYVKTLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARI 225
Query: 309 AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPF 368
EDR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 KEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPV 285
Query: 369 KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428
+TP MAGGLF+IDR YF IG YD M +WGGENLEMSFR+WQCGGS+EI CSHV H+F
Sbjct: 286 RTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVF 345
Query: 429 RKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQ 488
RKA+PY+FPGG V+ N R+A VWMDE+ +F++ +P K D V R LR+
Sbjct: 346 RKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKV-DYGDVSVRKTLREN 404
Query: 489 LKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS-------------- 534
LKC F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 LKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGN 464
Query: 535 -------------------MNQASGPASLLPCTHL--PVLTQMFVMKLPTDLIATDESVC 573
+++ SGP +L C H+ L + +L L + + C
Sbjct: 465 QVFSYTADKEIRTDDLCLDVSRLSGPVIMLKCHHMRGNQLWEYDAERLT--LRHANSNQC 522
Query: 574 LDVPEYENDISPRVRILACSGFNRQRW 600
LD P E+ + P ++ CSG Q+W
Sbjct: 523 LDEPSEEDKMVPTMQ--DCSGSRSQQW 547
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. May be responsible for the synthesis of Tn antigen in neuronal cells. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q10472|GALT1_HUMAN Polypeptide N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=GALNT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/446 (44%), Positives = 275/446 (61%), Gaps = 36/446 (8%)
Query: 188 CTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKS 247
C + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR M++EI+LVDDAS R+FLK
Sbjct: 106 CKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR 165
Query: 248 SLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307
L+ YV KL VP VIR R GLI+ARL GA ++G+++ FLDAHCECT+GWLE L+AR
Sbjct: 166 PLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLAR 225
Query: 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEP 367
+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 IKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLP 285
Query: 368 FKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427
+TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV H+
Sbjct: 286 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 345
Query: 428 FRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRK 487
FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SR+ LR
Sbjct: 346 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKV-DYGDISSRVGLRH 404
Query: 488 QLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS------------- 534
+L+C F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 KLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGG 464
Query: 535 --------------------MNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCL 574
+++ +GP ++L C HL + L + + CL
Sbjct: 465 NQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCL 524
Query: 575 DVPEYENDISPRVRILACSGFNRQRW 600
D E+ P +R C+G Q+W
Sbjct: 525 DKATEEDSQVPSIR--DCNGSRSQQW 548
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q8CF93|GLT13_MOUSE Polypeptide N-acetylgalactosaminyltransferase 13 OS=Mus musculus GN=Galnt13 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/447 (46%), Positives = 280/447 (62%), Gaps = 41/447 (9%)
Query: 189 TLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS 248
T V+ +E LP +S+VIVFHNEAWS LLRTV+SVI+RSP +L E++LVDDAS R+FLK +
Sbjct: 107 TKVYPDE-LPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLT 165
Query: 249 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308
L+ YV L VP ++IR R GLI+ARL GA ++G+++ FLDAHCECTLGWLE L+AR+
Sbjct: 166 LENYVKTLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARI 225
Query: 309 AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPF 368
EDR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 KEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPV 285
Query: 369 KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428
+TP MAGGLF+IDR YF IG YD M +WGGENLEMSFR+WQCGGS+EI CSHV H+F
Sbjct: 286 RTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVF 345
Query: 429 RKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQ 488
RKA+PY+FPGG V+ N R+A VWMDE+ +F++ +P K D V R LR+
Sbjct: 346 RKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKV-DYGDVSVRKTLREN 404
Query: 489 LKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS-------------- 534
LKC F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 LKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGN 464
Query: 535 -------------------MNQASGPASLLPCTHL--PVLTQMFVMKLPTDLIATDESVC 573
+++ SGP +L C H+ L + +L L + + C
Sbjct: 465 QVFSYTADKEIRTDDLCLDVSRLSGPVIMLKCHHMRGNQLWEYDAERLT--LRHANSNQC 522
Query: 574 LDVPEYENDISPRVRILACSGFNRQRW 600
LD P E+ + P ++ CSG Q+W
Sbjct: 523 LDEPSEEDKMVPTMQ--DCSGSRSQQW 547
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. Probably responsible for the synthesis of Tn antigen in neuronal cells. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q8IUC8|GLT13_HUMAN Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens GN=GALNT13 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 281/447 (62%), Gaps = 41/447 (9%)
Query: 189 TLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS 248
T V+ +E LP +S+VIVFHNEAWS LLRTV+SVI+RSP +L E++LVDDAS R+FLK +
Sbjct: 107 TKVYPDE-LPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLT 165
Query: 249 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308
L+ YV L VP ++IR R GLI+ARL GA ++G+++ FLDAHCECTLGWLE L+AR+
Sbjct: 166 LENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARI 225
Query: 309 AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPF 368
EDR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T P
Sbjct: 226 KEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPV 285
Query: 369 KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428
+TP MAGGLF+IDR YF IG YD M +WGGENLEMSFR+WQCGGS+EI CSHV H+F
Sbjct: 286 RTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVF 345
Query: 429 RKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQ 488
RKA+PY+FPGG V+ N R+A VWMDE+ +F++ +P K D V R LR+
Sbjct: 346 RKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKV-DYGDVSVRKTLREN 404
Query: 489 LKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGS-------------- 534
LKC F WYL +++P +P G IR+V+T++C++ K +
Sbjct: 405 LKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGN 464
Query: 535 -------------------MNQASGPASLLPCTHL--PVLTQMFVMKLPTDLIATDESVC 573
+++ +GP +L C H+ L + +L + +++ C
Sbjct: 465 QVFSYTADKEIRTDDLCLDVSRLNGPVIMLKCHHMRGNQLWEYDAERLTLRHVNSNQ--C 522
Query: 574 LDVPEYENDISPRVRILACSGFNRQRW 600
LD P E+ + P ++ CSG Q+W
Sbjct: 523 LDEPSEEDKMVPTMQ--DCSGSRSQQW 547
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. May be responsible for the synthesis of Tn antigen in neuronal cells. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 605 | ||||||
| 328723398 | 624 | PREDICTED: polypeptide N-acetylgalactosa | 0.676 | 0.655 | 0.676 | 1e-173 | |
| 340711409 | 604 | PREDICTED: polypeptide N-acetylgalactosa | 0.685 | 0.687 | 0.651 | 1e-168 | |
| 307215388 | 493 | Polypeptide N-acetylgalactosaminyltransf | 0.674 | 0.827 | 0.663 | 1e-167 | |
| 350416150 | 604 | PREDICTED: polypeptide N-acetylgalactosa | 0.687 | 0.688 | 0.648 | 1e-167 | |
| 380030377 | 595 | PREDICTED: polypeptide N-acetylgalactosa | 0.679 | 0.690 | 0.655 | 1e-167 | |
| 307183924 | 471 | Polypeptide N-acetylgalactosaminyltransf | 0.690 | 0.887 | 0.648 | 1e-166 | |
| 345497732 | 610 | PREDICTED: polypeptide N-acetylgalactosa | 0.674 | 0.668 | 0.643 | 1e-165 | |
| 328783898 | 603 | PREDICTED: polypeptide N-acetylgalactosa | 0.687 | 0.689 | 0.643 | 1e-165 | |
| 383848548 | 604 | PREDICTED: polypeptide N-acetylgalactosa | 0.680 | 0.682 | 0.647 | 1e-165 | |
| 242020557 | 511 | UDP-GalNAc:polypeptide N-acetylgalactosa | 0.669 | 0.792 | 0.648 | 1e-163 |
| >gi|328723398|ref|XP_001946977.2| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3-like isoform 1 [Acyrthosiphon pisum] gi|328723400|ref|XP_003247833.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/421 (67%), Positives = 344/421 (81%), Gaps = 12/421 (2%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
LP S+++IVFHNEAWS L+RTV SVI RSP+ +L EI+LVDDASTR+FL+ LD+YVAKL
Sbjct: 161 LPSSTVIIVFHNEAWSTLMRTVQSVIDRSPKYLLNEIILVDDASTRKFLEKELDDYVAKL 220
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
V TR+IRSP R+GLIKARL+GARQA+G+ILVFLDAHCECTLGWLE LV+RVAEDR RVV
Sbjct: 221 PVLTRIIRSPKRIGLIKARLMGARQAKGKILVFLDAHCECTLGWLEALVSRVAEDRKRVV 280
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGG 376
CPVIDIISD TFAYVRSFELHWGAFNW+LHFRWYT + D + ++D T+ F+TPAMAGG
Sbjct: 281 CPVIDIISDETFAYVRSFELHWGAFNWDLHFRWYTRTTPDIMKGQRDITQAFRTPAMAGG 340
Query: 377 LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSF 436
LFA+D++YFF +G YDE M++WGGENLE+SFRVWQCGGSIEIAPCSHV H+FRK+SPY+F
Sbjct: 341 LFAMDKSYFFELGGYDERMEIWGGENLELSFRVWQCGGSIEIAPCSHVGHVFRKSSPYTF 400
Query: 437 PGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKW 496
PGGVS VLY NLARVALVWMDEW EFYFKFNPEAEK RD+Q +R+RLELR +LKC FKW
Sbjct: 401 PGGVSHVLYTNLARVALVWMDEWQEFYFKFNPEAEKYRDEQQIRTRLELRDRLKCKGFKW 460
Query: 497 YLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPC--THLPVLT 554
YL +VWP HF+P D +FFG+I+H+ +++C+EKP +GS+NQ GP + C L+
Sbjct: 461 YLDNVWPEHFMPTDKRFFGKIKHMLSNRCLEKPSGRGSLNQPMGPVGISGCDVQGRASLS 520
Query: 555 QMFVMKLPTDL--------IATDESVCLDVPEYE--NDISPRVRILACSGFNRQRWTYDK 604
MFVM +L + TDESVCLD PE E ++I+ +VRI+AC+G RQRW YD
Sbjct: 521 LMFVMAPEEELDSVVWSGSLMTDESVCLDTPELEATDEIALKVRIVACTGQKRQRWKYDV 580
Query: 605 E 605
E
Sbjct: 581 E 581
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340711409|ref|XP_003394268.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/419 (65%), Positives = 343/419 (81%), Gaps = 4/419 (0%)
Query: 189 TLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS 248
T N LPK+SI+IVFHNEAWS LLRTV+SVI+RSPR +L+EI+LVDD S R+FLK +
Sbjct: 146 TRYMNVGNLPKTSIIIVFHNEAWSTLLRTVYSVINRSPRHLLEEIILVDDNSDRDFLKDA 205
Query: 249 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308
LDE+V L V T+V+RS R+GL+ ARLLGA +A+GE+L FLDAHCECT+GWLE L+ V
Sbjct: 206 LDEHVKNLKVSTKVLRSRKRIGLVNARLLGANRAKGEVLTFLDAHCECTVGWLEPLLEAV 265
Query: 309 AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPF 368
A++RTRVV PVIDII+D TF+Y RSFELHWGAFNW+LHFRW T +R++ EPF
Sbjct: 266 AKNRTRVVSPVIDIINDDTFSYTRSFELHWGAFNWDLHFRWLTLNGRLLKERRENIVEPF 325
Query: 369 KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428
+TPAMAGGLF+++R YFF +G+YD++M++WGGENLE+SFRVWQCGGSIEIAPCSHV HLF
Sbjct: 326 RTPAMAGGLFSMNRNYFFELGSYDDQMKIWGGENLELSFRVWQCGGSIEIAPCSHVGHLF 385
Query: 429 RKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQ 488
RK+SPY+FPGGV E+LYGNLARVALVWMDEWAEFYFKFN EA + RDKQ VR RLELRK+
Sbjct: 386 RKSSPYTFPGGVGEILYGNLARVALVWMDEWAEFYFKFNTEAARLRDKQPVRGRLELRKR 445
Query: 489 LKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCT 548
L+C +F+WYL ++WP HF P DD+FFGRI H+ ++KC+ +P AKG+ +Q SG A L C
Sbjct: 446 LQCKNFEWYLNNIWPEHFFPKDDRFFGRILHISSNKCIMRPTAKGTYSQPSGYAVLETCL 505
Query: 549 HLPVLTQMFVMKLPTD-LIATDESVCLDVPEYEND-ISPRVRILACSGFNRQRWTYDKE 605
P+L+QMFVM TD +I TDESVCLD P+++ +P+V+I+ACSG +RQ+W YD++
Sbjct: 506 PRPILSQMFVMT--TDGIIMTDESVCLDAPDHDTQHKTPKVKIMACSGHSRQKWRYDEQ 562
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307215388|gb|EFN90069.1| Polypeptide N-acetylgalactosaminyltransferase 3 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 272/410 (66%), Positives = 332/410 (80%), Gaps = 2/410 (0%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
LPK+SI+IVFHNEAWS LLRTVHSVI RSPR +L+EI+LVDD S REFLK+ LDEYV KL
Sbjct: 42 LPKTSIIIVFHNEAWSTLLRTVHSVIDRSPRELLEEIILVDDNSEREFLKNPLDEYVKKL 101
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
SVPT+V+RS RVGLIKARLLGA A+GE+L FLDAHCECT+GWLE L+ V ++ TR++
Sbjct: 102 SVPTKVLRSTERVGLIKARLLGASDAKGEVLTFLDAHCECTVGWLEPLLEAVGKNATRII 161
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGG 376
PVIDII+D TF+Y RSFELHWGAFNW+LHFRW T +R+ EPF+TPAMAGG
Sbjct: 162 SPVIDIINDNTFSYTRSFELHWGAFNWDLHFRWLTLNGRLLKERRESIVEPFRTPAMAGG 221
Query: 377 LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSF 436
LF+++R YFF +G+YD++M++WGGENLE+SFR WQCGGSIEIAPCSHV HLFRK+SPY+F
Sbjct: 222 LFSMNRNYFFQLGSYDDQMRIWGGENLELSFRAWQCGGSIEIAPCSHVGHLFRKSSPYTF 281
Query: 437 PGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKW 496
PGGV ++LYGNL RVA VWMD+WAEFYFKFNPEA + R KQ VRSRL LR++L+C SF+W
Sbjct: 282 PGGVGDILYGNLVRVASVWMDQWAEFYFKFNPEAARLRYKQQVRSRLALREKLQCKSFEW 341
Query: 497 YLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQM 556
YL +VWP HF P DD+FFGR+ H T++C+ +P AKGS Q SG A L C P+L+QM
Sbjct: 342 YLENVWPEHFFPTDDRFFGRVIHATTNRCLMRPTAKGSYTQPSGHAVLHSCIPRPMLSQM 401
Query: 557 FVMKLPTDLIATDESVCLDVPEYE-NDISPRVRILACSGFNRQRWTYDKE 605
FVM +I TDESVCLD PE + +P+V+I+ACSG +RQ+W YDK+
Sbjct: 402 FVMT-KNGVIMTDESVCLDAPERDTQQKTPKVKIMACSGRDRQKWQYDKQ 450
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350416150|ref|XP_003490858.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 271/418 (64%), Positives = 341/418 (81%), Gaps = 2/418 (0%)
Query: 189 TLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS 248
T N LPK+SI+IVFHNEAWS LLRTV+SVI+RSPR +L+EI+LVDD S R+FLK +
Sbjct: 146 TRYMNVGNLPKTSIIIVFHNEAWSTLLRTVYSVINRSPRHLLEEIILVDDNSDRDFLKDA 205
Query: 249 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308
LDE+V L V T+V+RS R+GL+ ARLLGA +A+GE+L FLDAHCECT+GWLE L+ V
Sbjct: 206 LDEHVKNLKVSTKVLRSRKRIGLVNARLLGANRAKGEVLTFLDAHCECTVGWLEPLLEAV 265
Query: 309 AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPF 368
A++RTRVV PVIDII+D TF+Y RSFELHWGAFNW+LHFRW T +R++ EPF
Sbjct: 266 AKNRTRVVSPVIDIINDDTFSYTRSFELHWGAFNWDLHFRWLTLNGRLLKERRENIVEPF 325
Query: 369 KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428
+TPAMAGGLF+++R YFF +G+YD++M++WGGENLE+SFRVWQCGGSIEIAPCSHV HLF
Sbjct: 326 RTPAMAGGLFSMNRNYFFELGSYDDQMKIWGGENLELSFRVWQCGGSIEIAPCSHVGHLF 385
Query: 429 RKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQ 488
RK+SPY+FPGGV E+LYGNLARVALVWMDEWAEFYFKFN EA + RDKQ VR RLELRK+
Sbjct: 386 RKSSPYTFPGGVGEILYGNLARVALVWMDEWAEFYFKFNTEAARLRDKQPVRGRLELRKR 445
Query: 489 LKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCT 548
L+C +F+WYL ++WP HF P DD+FFGRI H+ ++KC+ +P AKG+ +Q SG A L C
Sbjct: 446 LQCKNFEWYLNNIWPEHFFPKDDRFFGRILHISSNKCIMRPTAKGTYSQPSGYAVLETCL 505
Query: 549 HLPVLTQMFVMKLPTDLIATDESVCLDVPEYEND-ISPRVRILACSGFNRQRWTYDKE 605
P+L+QMFVM +I TDESVCLD P+++ +P+V+I+ACSG +RQ+W YD++
Sbjct: 506 PRPILSQMFVMT-KDGIIMTDESVCLDAPDHDTQHKTPKVKIMACSGNDRQKWRYDEQ 562
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380030377|ref|XP_003698825.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 272/415 (65%), Positives = 337/415 (81%), Gaps = 4/415 (0%)
Query: 193 NEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEY 252
N + LPK+SI+IVFHNEAWS LLRTV+SVI RSPR +L+EI+LVDD S R+FLK +LDE+
Sbjct: 141 NLDNLPKTSIIIVFHNEAWSTLLRTVYSVIDRSPRQLLEEIILVDDNSDRDFLKDTLDEH 200
Query: 253 VAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDR 312
V L V T+V+RS R+GL+ ARLLGA A+GE+L FLDAHCECT+GWLE L+ VA++R
Sbjct: 201 VKNLQVSTKVLRSRKRIGLVNARLLGANNAKGEVLTFLDAHCECTVGWLEPLLEAVAKNR 260
Query: 313 TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPA 372
TRVV PVIDII+D TF+Y RSFELHWGAFNW+LHFRW T +R++ EPF+TPA
Sbjct: 261 TRVVSPVIDIINDDTFSYTRSFELHWGAFNWDLHFRWLTLNGRLLKERRENIVEPFRTPA 320
Query: 373 MAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKAS 432
MAGGLF+++R YFF +G+YD +M++WGGENLE+SFRVWQCGGSIEIAPCSHV HLFRK+S
Sbjct: 321 MAGGLFSMNRDYFFELGSYDNQMKIWGGENLELSFRVWQCGGSIEIAPCSHVGHLFRKSS 380
Query: 433 PYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCH 492
PY+FPGGV E+LYGNLARVALVWMDEWAEFYFKFN EA + RDKQ +RSRLELRK+L+C
Sbjct: 381 PYTFPGGVGEILYGNLARVALVWMDEWAEFYFKFNAEAARLRDKQTIRSRLELRKKLQCK 440
Query: 493 SFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPV 552
+F+WYL ++WP HF P DD+FFGRI H+ + KC+ +P AKG+ +Q SG A L C P+
Sbjct: 441 NFEWYLDNIWPEHFFPKDDRFFGRIVHILSKKCIMRPSAKGTYSQPSGYAILHSCVPRPL 500
Query: 553 LTQMFVMKLPTD-LIATDESVCLDVPEYE-NDISPRVRILACSGFNRQRWTYDKE 605
L QMFVM TD +I TDESVCLD PE + + +P+V+I+AC+ RQ+W YDK+
Sbjct: 501 LNQMFVMT--TDGIIMTDESVCLDAPENDTHQTTPKVKIMACNNHIRQKWQYDKQ 553
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307183924|gb|EFN70514.1| Polypeptide N-acetylgalactosaminyltransferase 3 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 273/421 (64%), Positives = 334/421 (79%), Gaps = 3/421 (0%)
Query: 187 ECTLVF-NEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL 245
+C L + N LPK+SI+IVFHNEAWS LLRTVHSVI+RSPR +LKEI+LVDD S REFL
Sbjct: 47 KCILRYVNLSNLPKTSIIIVFHNEAWSTLLRTVHSVINRSPRELLKEIILVDDNSEREFL 106
Query: 246 KSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLV 305
K+ LD+YV LSVPTRV+RS R+GLIKARLLGA A+GE+L FLDAHCECT+GWLE L+
Sbjct: 107 KNPLDDYVKTLSVPTRVLRSNARIGLIKARLLGAHNAKGEVLTFLDAHCECTVGWLEPLL 166
Query: 306 ARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365
+ ++ TRVV PVIDII+D TF+Y RSFELHWGAFNW+LHFRW T +R +
Sbjct: 167 EAIGKNATRVVSPVIDIINDDTFSYTRSFELHWGAFNWDLHFRWLTLNGRLLKERRDNII 226
Query: 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425
EPF+TPAMAGGLF++++ YFF +G+YD+EM++WGGENLE+SFR WQCGGS+EIAPCSHV
Sbjct: 227 EPFRTPAMAGGLFSMNKDYFFKLGSYDDEMRIWGGENLELSFRTWQCGGSVEIAPCSHVG 286
Query: 426 HLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLEL 485
HLFRK+SPY+FPGGV ++LYGNLARVALVWMD+WA+FYFKFNPEA K R KQ +RSRL L
Sbjct: 287 HLFRKSSPYTFPGGVGDILYGNLARVALVWMDQWADFYFKFNPEAAKLRYKQQIRSRLAL 346
Query: 486 RKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLL 545
R++L+C SF+WYL +VWP HF P DD+FFG+I H T +C+ +P AK Q SG A L
Sbjct: 347 REKLQCKSFEWYLENVWPEHFFPTDDRFFGKIVHAATKRCLMRPTAKSLYAQPSGNAILH 406
Query: 546 PCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYE-NDISPRVRILACSGFNRQRWTYDK 604
C P+L QMFVM +I TDESVCLD PE + +P+V+I+ACSG RQRW YD+
Sbjct: 407 SCIPRPILGQMFVMT-KNGVIMTDESVCLDAPERDMQQRTPKVKIMACSGRERQRWQYDE 465
Query: 605 E 605
+
Sbjct: 466 Q 466
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345497732|ref|XP_001601595.2| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 264/410 (64%), Positives = 334/410 (81%), Gaps = 2/410 (0%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
LP +S++IVFHNEAWS LLRTVHSVI+RSPR +L+EI+LVDD S R+FL+ LDEYVA+L
Sbjct: 157 LPSTSVIIVFHNEAWSTLLRTVHSVINRSPRKLLEEIILVDDNSDRDFLRKPLDEYVAQL 216
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
+VPTRV+RS RVGL+ ARL+GA +A+GE+L FLDAHCECT GWLE L+ ++++RTRVV
Sbjct: 217 NVPTRVLRSDKRVGLVNARLMGANEAKGEVLTFLDAHCECTAGWLEPLLEAISKNRTRVV 276
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGG 376
PVIDII+D TF+Y RSFELHWGAFNW+LHFRW + +R++ +PFKTPAMAGG
Sbjct: 277 SPVIDIINDDTFSYTRSFELHWGAFNWDLHFRWLMLNGALLRERRENIVDPFKTPAMAGG 336
Query: 377 LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSF 436
LF++DR YFF +G+YDE M++WGGENLE+SFRVWQCGGS+EIAPCSHV H+FRK+SPY+F
Sbjct: 337 LFSMDREYFFELGSYDEHMRIWGGENLELSFRVWQCGGSVEIAPCSHVGHIFRKSSPYTF 396
Query: 437 PGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKW 496
PGGV E+LYGNLARVALVWMDEW +FYF FNP+A++ RDKQ +RSRLELR++LKC SF+W
Sbjct: 397 PGGVDEILYGNLARVALVWMDEWGKFYFNFNPQAQRVRDKQQIRSRLELRERLKCKSFEW 456
Query: 497 YLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQM 556
YL +VWP HF P DD+FFG I H KC+ +P++KG+ +Q SG + C P L+QM
Sbjct: 457 YLDNVWPDHFFPKDDRFFGYILHPSNKKCLMRPMSKGAYSQPSGFVAYQDCIVPPNLSQM 516
Query: 557 FVMKLPTDLIATDESVCLDVPEYEN-DISPRVRILACSGFNRQRWTYDKE 605
FVM+ +I TDESVCLD PE +N P+V+++ACSGF Q+W YD++
Sbjct: 517 FVMR-KDGVIMTDESVCLDAPEKDNRHEKPKVKLMACSGFASQKWEYDEK 565
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328783898|ref|XP_003250361.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 269/418 (64%), Positives = 335/418 (80%), Gaps = 2/418 (0%)
Query: 189 TLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS 248
T N LPK+SI+IVFHNEAWS LLRTV+SVI RSP +L+EI+LVDD S R+FLK +
Sbjct: 145 TRYMNLGNLPKTSIIIVFHNEAWSTLLRTVYSVIDRSPIQLLEEIILVDDNSDRDFLKDA 204
Query: 249 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308
LDE++ L V T+V+RS R+GL+ ARLLGA +A+GE+L FLDAHCECT+GWLE L+ V
Sbjct: 205 LDEHIKNLQVSTKVLRSKKRIGLVNARLLGANKAKGEVLTFLDAHCECTVGWLEPLLEAV 264
Query: 309 AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPF 368
A++RTRVV PVIDII+D TF+Y RSFELHWGAFNW+LHFRW T +R++ EPF
Sbjct: 265 AKNRTRVVSPVIDIINDDTFSYTRSFELHWGAFNWDLHFRWLTLNGRLLKERRENIVEPF 324
Query: 369 KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428
+TPAMAGGLF+++R YFF +G+YD +M++WGGENLE+SFRVWQCGGSIEIAPCSHV HLF
Sbjct: 325 RTPAMAGGLFSMNRDYFFELGSYDNQMKIWGGENLELSFRVWQCGGSIEIAPCSHVGHLF 384
Query: 429 RKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQ 488
RK+SPY+FPGGV E+LYGNLARVALVWMDEWAEFYFKFN EA + RDKQ +RSRLELRK+
Sbjct: 385 RKSSPYTFPGGVGEILYGNLARVALVWMDEWAEFYFKFNAEAARLRDKQTIRSRLELRKK 444
Query: 489 LKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCT 548
L+C +F+WYL ++WP HF P DD+FFGRI H+ + KC+ +P AKG+ +Q SG A L C
Sbjct: 445 LQCKNFEWYLDNIWPEHFFPKDDRFFGRIVHILSKKCIMRPSAKGTYSQPSGYAILHSCV 504
Query: 549 HLPVLTQMFVMKLPTDLIATDESVCLDVPEYE-NDISPRVRILACSGFNRQRWTYDKE 605
P+L QMFVM +I TDESVCLD PE + + +P+V+I+AC+ RQ+W YDK+
Sbjct: 505 PRPLLNQMFVMT-ADGIIMTDESVCLDAPENDTHQTTPKVKIMACNSHIRQKWQYDKQ 561
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383848548|ref|XP_003699911.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 3-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 268/414 (64%), Positives = 336/414 (81%), Gaps = 2/414 (0%)
Query: 193 NEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEY 252
N LP++SI+IVFHNEAWS LLRTV+SV++RSPR +L+EI+LVDD S REFLK +LDE+
Sbjct: 150 NLNGLPRTSIIIVFHNEAWSTLLRTVYSVVNRSPRHLLEEIILVDDDSDREFLKDALDEH 209
Query: 253 VAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDR 312
V L VPT+V+RS R+GL+ ARLLGA +A+GE+L FLDAHCECT+GWLE L+ VA+++
Sbjct: 210 VKSLRVPTKVLRSKKRIGLVNARLLGANEAKGEVLTFLDAHCECTVGWLEPLLEAVAKNK 269
Query: 313 TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPA 372
TRVV PVIDII+D TF+Y RSFELHWGAFNW+LHFRW T +R++ EPF+TPA
Sbjct: 270 TRVVSPVIDIINDDTFSYTRSFELHWGAFNWDLHFRWLTLNGRLLKERRENIVEPFRTPA 329
Query: 373 MAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKAS 432
MAGGLF+++R YFF +G+YD++M++WGGENLE+SFRVWQCGGS+EIAPCSHV HLFRK+S
Sbjct: 330 MAGGLFSMNRDYFFELGSYDDQMKIWGGENLELSFRVWQCGGSVEIAPCSHVGHLFRKSS 389
Query: 433 PYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCH 492
PY+FPGGV E+LYGNLARVALVWMDEWAEFYFKFN EA + R KQ VR+RL LRK+L+C
Sbjct: 390 PYTFPGGVGEILYGNLARVALVWMDEWAEFYFKFNAEASRLRHKQPVRARLALRKRLQCK 449
Query: 493 SFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPV 552
SF+WYL +VWP HF P +D+FFGRI HV T KC+ +P AKG+ +Q SG A L C PV
Sbjct: 450 SFEWYLDNVWPEHFFPKNDRFFGRIVHVSTKKCIMRPTAKGTYSQPSGYALLESCIPRPV 509
Query: 553 LTQMFVMKLPTDLIATDESVCLDVPEYEND-ISPRVRILACSGFNRQRWTYDKE 605
L QMFVM + ++ TDES+CLD P+ + +PRV+I+ACS +RQ W YD++
Sbjct: 510 LNQMFVMT-KSGIVMTDESICLDAPDRDTQHKTPRVKIMACSSQSRQNWQYDEQ 562
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242020557|ref|XP_002430719.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis] gi|212515909|gb|EEB17981.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/410 (64%), Positives = 330/410 (80%), Gaps = 5/410 (1%)
Query: 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVA 254
E LP +S+VIVFHNEAWS LLRTV SVI RSPR +L EI+LVDD STR+FLK LDEYVA
Sbjct: 65 ELLP-TSVVIVFHNEAWSTLLRTVQSVIDRSPRELLTEIILVDDGSTRKFLKEDLDEYVA 123
Query: 255 KLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTR 314
+L VP +VIR+ R GLI+AR++GA++A+G++L FLDAHCECT GWLE L+ RV+EDR +
Sbjct: 124 RLPVPVKVIRTKEREGLIRARMIGAKEAKGQVLTFLDAHCECTKGWLEPLLVRVSEDRKK 183
Query: 315 VVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMA 374
VVCPVIDII+D TFAYVRSFELHWGAFNW LHFRWYT G+++ ++ D TEPF TPAMA
Sbjct: 184 VVCPVIDIINDDTFAYVRSFELHWGAFNWNLHFRWYTLGTTEIKKRKNDVTEPFPTPAMA 243
Query: 375 GGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPY 434
GGLFAI R YF+ IGAYDE+M++WGGENLEMSFR WQCGGS+EI PCSHV HLFRK+SPY
Sbjct: 244 GGLFAIRRDYFYEIGAYDEQMKIWGGENLEMSFRGWQCGGSVEIVPCSHVGHLFRKSSPY 303
Query: 435 SFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSF 494
+FPGGV E+L+ NLARVALVWMDEW EF+FKFNPEA +QRDKQ+VR+R++LR +LKC SF
Sbjct: 304 TFPGGVGEILHANLARVALVWMDEWQEFFFKFNPEAARQRDKQSVRARIQLRSRLKCKSF 363
Query: 495 KWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLT 554
+WYL +VWP HF P +D+FFG I+ +KC+ +P S NQ +G +L PC L
Sbjct: 364 EWYLDNVWPQHFFPKNDRFFGLIKSASDNKCLTRPHGPPSTNQPTGVVTLTPCKE--TLE 421
Query: 555 QMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQRWTYDK 604
FV +D++ TDESVCLD+ + +N++ +V+++ACSG RQ+W YDK
Sbjct: 422 HFFVYTKFSDVM-TDESVCLDLLD-KNEMKAKVKVMACSGSPRQKWMYDK 469
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 605 | ||||||
| FB|FBgn0027558 | 667 | pgant3 "polypeptide GalNAc tra | 0.530 | 0.481 | 0.586 | 9.9e-114 | |
| FB|FBgn0031681 | 630 | pgant5 "polypeptide GalNAc tra | 0.656 | 0.630 | 0.513 | 6.1e-110 | |
| UNIPROTKB|E1C6M1 | 556 | GALNT13 "Uncharacterized prote | 0.677 | 0.737 | 0.503 | 3.1e-106 | |
| ZFIN|ZDB-GENE-091204-444 | 556 | galnt13 "UDP-N-acetyl-alpha-D- | 0.677 | 0.737 | 0.503 | 7.5e-105 | |
| WB|WBGene00001631 | 618 | gly-6 [Caenorhabditis elegans | 0.659 | 0.645 | 0.490 | 9.4e-105 | |
| UNIPROTKB|J9NYT5 | 556 | GALNT13 "Uncharacterized prote | 0.669 | 0.728 | 0.498 | 1.2e-104 | |
| UNIPROTKB|F1PK73 | 561 | GALNT13 "Uncharacterized prote | 0.669 | 0.721 | 0.498 | 1.2e-104 | |
| UNIPROTKB|Q5ZJL1 | 559 | GALNT1 "Uncharacterized protei | 0.666 | 0.720 | 0.494 | 1.6e-104 | |
| UNIPROTKB|Q29121 | 559 | GALNT1 "Polypeptide N-acetylga | 0.666 | 0.720 | 0.491 | 2e-104 | |
| UNIPROTKB|F1SAI6 | 559 | LOC100738545 "Uncharacterized | 0.666 | 0.720 | 0.491 | 3.2e-104 |
| FB|FBgn0027558 pgant3 "polypeptide GalNAc transferase 3" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1067 (380.7 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 190/324 (58%), Positives = 240/324 (74%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
LP +S++IVFHNEAWS LLRT+ SVI+RSPR +LKEI+LVDDAS R +LK L+ YV L
Sbjct: 149 LPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVL 208
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
+VPTR+ R R GL+ ARLLGA A G++L FLDAHCEC+ GWLE L++R+ E R V+
Sbjct: 209 AVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVI 268
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS--DAIIKRKDFTEPFKTPAMA 374
CPVIDIISD F+Y ++FE HWGAFNW+L FRW++ A KD T+P TP MA
Sbjct: 269 CPVIDIISDDNFSYTKTFENHWGAFNWQLSFRWFSSDRKRQTAGNSSKDSTDPIATPGMA 328
Query: 375 GGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPY 434
GGLFAIDR YF+ +G+YD M+VWGGEN+EMSFR+WQCGG +EI+PCSHV H+FR ++PY
Sbjct: 329 GGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPY 388
Query: 435 SFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEK-QRDKQAVRSRLELRKQLKCHS 493
+FPGG+SEVL NLAR A VWMD+W F + +DK V R+ LR++L+C
Sbjct: 389 TFPGGMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKP 448
Query: 494 FKWYLTHVWPHHFLPMDDKFFGRI 517
F WYL ++WP HF P D+FFG+I
Sbjct: 449 FSWYLENIWPEHFFPAPDRFFGKI 472
|
|
| FB|FBgn0031681 pgant5 "polypeptide GalNAc transferase 5" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 210/409 (51%), Positives = 274/409 (66%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
LP +SIVIVFHNEAW+ LLRTV SVI+RSPR++LKEI+LVDDAS R+FL L+EYVAKL
Sbjct: 186 LPTTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLEEYVAKL 245
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
V T V+R+ R GLI+ARLLGA GE++ FLDAHCECT GWLE L+AR+ ++R VV
Sbjct: 246 PVKTFVLRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVV 305
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGG 376
CP+ID+ISD TF Y+ + + WG FNW+L+FRWY S + + D T P +TP MAGG
Sbjct: 306 CPIIDVISDETFEYITASDSTWGGFNWKLNFRWYRVPSREMARRNNDRTAPLRTPTMAGG 365
Query: 377 LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSF 436
LF+ID+ YF+ IG+YDE M +WGGENLEMSFR+WQCGG +EI PCSHV H+FR SPY+F
Sbjct: 366 LFSIDKDYFYEIGSYDEGMDIWGGENLEMSFRIWQCGGILEIIPCSHVGHVFRDKSPYTF 425
Query: 437 PGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKW 496
PGGV++++ N ARVA VW+DEW +FY+ + A K V R LR +LKC SF+W
Sbjct: 426 PGGVAKIVLHNAARVAEVWLDEWRDFYYSMSTGARKASAGD-VSDRKALRDRLKCKSFRW 484
Query: 497 YLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQM 556
YL +V+P +P+D + G IR+ +T C++ K N+ G + C L Q+
Sbjct: 485 YLENVYPESLMPLDYYYLGEIRNAETETCLDTMGRK--YNEKVG---ISYCHGLGG-NQV 538
Query: 557 FVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQRWTYDKE 605
F +++ D +CLD ++ VR G Q W YD E
Sbjct: 539 FAYTKRQQIMSDD--LCLDASSSNGPVN-MVRCHNMGG--NQEWVYDAE 582
|
|
| UNIPROTKB|E1C6M1 GALNT13 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 215/427 (50%), Positives = 281/427 (65%)
Query: 180 VFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDA 239
V LD C+ T V+ +E LP +S+VIVFHNEAWS LLRTVHSV++RSPR +L EI+LVDDA
Sbjct: 100 VRLDG-CK-TKVYPDE-LPNTSVVIVFHNEAWSTLLRTVHSVVARSPRRLLAEIILVDDA 156
Query: 240 STREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLG 299
S REFLK+SL+ YV KL VP +++R R GLI+ARL GA A G+++ FLDAHCECT G
Sbjct: 157 SEREFLKASLENYVKKLEVPVKILRMEQRSGLIRARLRGAAAARGQVITFLDAHCECTRG 216
Query: 300 WLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359
WLE L+AR+ EDR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY +
Sbjct: 217 WLEPLLARIWEDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDR 276
Query: 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419
++ D T P +TP MAGGLF+IDR YF IG+YD M +WGGENLEMSFRVWQCGGS+EI
Sbjct: 277 RKGDRTLPVRTPTMAGGLFSIDRNYFEEIGSYDAGMDIWGGENLEMSFRVWQCGGSLEIV 336
Query: 420 PCSHVAHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAV 479
CSHV H+FRKA+PY+FPGG V+ N R+A VWMDE+ +F++ +P K D V
Sbjct: 337 TCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKV-DYGDV 395
Query: 480 RSRLELRKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQAS 539
+R LR+ LKC F WYL +++P +P G IR+V T++C++ K N+
Sbjct: 396 SARKALREALKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVDTNQCLDNMGRKE--NEKV 453
Query: 540 GPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQ 598
G + C H Q+F + I TD+ +CLDV ++ +L C Q
Sbjct: 454 G---IFNC-HGMGGNQVFSYTADKE-IRTDD-LCLDVSRLNGPVT----MLKCHHMRGNQ 503
Query: 599 RWTYDKE 605
W YD E
Sbjct: 504 LWEYDAE 510
|
|
| ZFIN|ZDB-GENE-091204-444 galnt13 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
Identities = 215/427 (50%), Positives = 276/427 (64%)
Query: 180 VFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDA 239
V LD C+ T + ++ LP +SIVIVFHNEAWS LLRTVHS I+RSPR +L EILLVDDA
Sbjct: 100 VRLDG-CK-TKTYPDD-LPNTSIVIVFHNEAWSTLLRTVHSAINRSPRQLLYEILLVDDA 156
Query: 240 STREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLG 299
S R+FLK L++YVA L VP R++R R GLI+ARL GA G+++ FLDAHCECT G
Sbjct: 157 SERDFLKEKLEDYVATLEVPVRILRMEQRTGLIRARLRGAAATRGQVITFLDAHCECTTG 216
Query: 300 WLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359
WLE L+AR+ EDR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY +
Sbjct: 217 WLEPLMARIKEDRRAVVCPIIDVISDETFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDR 276
Query: 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419
++ D T P +TP MAGGLF+IDR YF IG YD M +WGGENLEMSFR+WQCGGS+EI
Sbjct: 277 RKGDRTLPVRTPTMAGGLFSIDRTYFEEIGTYDSGMDIWGGENLEMSFRIWQCGGSLEIV 336
Query: 420 PCSHVAHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAV 479
CSHV H+FRKA+PYSFPGG +V+ N R+A VWMDE+ +F++ +P + D V
Sbjct: 337 TCSHVGHVFRKATPYSFPGGTGQVINKNNRRLAEVWMDEFKDFFYIISPGVVRV-DYGDV 395
Query: 480 RSRLELRKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQAS 539
SR LR+ LKC F WYL +V+P +P G IR+V+T++CV+ K N+
Sbjct: 396 SSRKALRESLKCKPFSWYLENVYPDSQIPRRYYSLGEIRNVETNQCVDNMGRKE--NEKV 453
Query: 540 GPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQ 598
G C H Q+F + I TD+ +CLD P V +L C Q
Sbjct: 454 G---FFNC-HGMGGNQVFSYTADKE-IRTDD-LCLDASRLNG---PVV-MLKCHHMKGNQ 503
Query: 599 RWTYDKE 605
+ YD E
Sbjct: 504 MFEYDAE 510
|
|
| WB|WBGene00001631 gly-6 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1007 (359.5 bits), Expect = 9.4e-105, Sum P(2) = 9.4e-105
Identities = 202/412 (49%), Positives = 271/412 (65%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLK-SSLDEYVAK 255
LP +S++IV+HNEA+S LLRTV SVI RSP+ +LKEI+LVDD S REFL+ +LD +
Sbjct: 156 LPTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFLRYPTLDTTLKP 215
Query: 256 LSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRV 315
L ++IRS RVGLI+AR++GA++A+G++L FLD+HCECT GWLE L+ R+ +R V
Sbjct: 216 LPTDIKIIRSKERVGLIRARMMGAQEAQGDVLTFLDSHCECTKGWLEPLLTRIKLNRKAV 275
Query: 316 VCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRK--DFTEPFKTPAM 373
CPVIDII+D TF Y + E+ G FNW L FRWY G A+ K+ D T P ++P M
Sbjct: 276 PCPVIDIINDNTFQYQKGIEMFRGGFNWNLQFRWY--GMPTAMAKQHLLDPTGPIESPTM 333
Query: 374 AGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASP 433
AGGLF+I+R YF +G YD M +WGGENLEMSFR+WQCGG +EI PCSHV H+FRK+SP
Sbjct: 334 AGGLFSINRNYFEELGEYDPGMDIWGGENLEMSFRIWQCGGRVEILPCSHVGHVFRKSSP 393
Query: 434 YSFPGGVS-EVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCH 492
+ FPG S +VL NL RVA VWMD+W +++K P+A + R V R+ELRK+L C
Sbjct: 394 HDFPGKSSGKVLNTNLLRVAEVWMDDWKHYFYKIAPQAHRMRSSIDVSERVELRKKLNCK 453
Query: 493 SFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHK-CVEKPLAKGSMNQASGPASLLPCTHLP 551
SFKWYL +V+ HFLP FGR+ C+ L + AS A L H
Sbjct: 454 SFKWYLQNVFQDHFLPTPLDRFGRMTSSSNSSVCLAWTLRSSGIKTAS-TADCLKIFHK- 511
Query: 552 VLTQMFVMKLPTDLIATDESVCLDVPEYENDISP-RVRILACSGFNRQRWTY 602
TQ+++ I TDE +CL V + + S ++++ C+GF+ + W +
Sbjct: 512 --TQLWLYT-GDRRIRTDEHLCLSVVQLLHTTSDWKIQLKECAGFDTEYWDF 560
|
|
| UNIPROTKB|J9NYT5 GALNT13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 210/421 (49%), Positives = 278/421 (66%)
Query: 186 CECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL 245
C+ T V+ +E LP +S+VIVFHNEAWS LLRTV+SVI+RSPR +L E++LVDDAS R+FL
Sbjct: 105 CK-TKVYADE-LPNTSVVIVFHNEAWSTLLRTVYSVINRSPRYLLSEVILVDDASERDFL 162
Query: 246 KSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLV 305
K +L+ YV L VP ++IR R GLI+ARL GA ++G+++ FLDAHCECTLGWLE L+
Sbjct: 163 KLTLENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLL 222
Query: 306 ARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365
AR+ EDR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T
Sbjct: 223 ARIKEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRT 282
Query: 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425
P +TP MAGGLF+IDR YF IG YD M +WGGENLEMSFR+WQCGGS+EI CSHV
Sbjct: 283 LPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVG 342
Query: 426 HLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLEL 485
H+FRKA+PY+FPGG V+ N R+A VWMDE+ +F++ +P K D V R L
Sbjct: 343 HVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKV-DYGDVSVRKTL 401
Query: 486 RKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLL 545
R+ LKC F WYL +++P +P G IR+V+T++C++ K N+ G +
Sbjct: 402 RENLKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKE--NEKVG---IF 456
Query: 546 PCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYDK 604
C H Q+F + I TD+ +CLDV +S V +L C Q W YD
Sbjct: 457 NC-HGMGGNQVFSYTADKE-IRTDD-LCLDVSR----LSGPVIMLKCHHMRGNQLWEYDA 509
Query: 605 E 605
E
Sbjct: 510 E 510
|
|
| UNIPROTKB|F1PK73 GALNT13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 210/421 (49%), Positives = 278/421 (66%)
Query: 186 CECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL 245
C+ T V+ +E LP +S+VIVFHNEAWS LLRTV+SVI+RSPR +L E++LVDDAS R+FL
Sbjct: 105 CK-TKVYADE-LPNTSVVIVFHNEAWSTLLRTVYSVINRSPRYLLSEVILVDDASERDFL 162
Query: 246 KSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLV 305
K +L+ YV L VP ++IR R GLI+ARL GA ++G+++ FLDAHCECTLGWLE L+
Sbjct: 163 KLTLENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLL 222
Query: 306 ARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365
AR+ EDR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T
Sbjct: 223 ARIKEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRT 282
Query: 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425
P +TP MAGGLF+IDR YF IG YD M +WGGENLEMSFR+WQCGGS+EI CSHV
Sbjct: 283 LPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVG 342
Query: 426 HLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLEL 485
H+FRKA+PY+FPGG V+ N R+A VWMDE+ +F++ +P K D V R L
Sbjct: 343 HVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKV-DYGDVSVRKTL 401
Query: 486 RKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLL 545
R+ LKC F WYL +++P +P G IR+V+T++C++ K N+ G +
Sbjct: 402 RENLKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKE--NEKVG---IF 456
Query: 546 PCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYDK 604
C H Q+F + I TD+ +CLDV +S V +L C Q W YD
Sbjct: 457 NC-HGMGGNQVFSYTADKE-IRTDD-LCLDVSR----LSGPVIMLKCHHMRGNQLWEYDA 509
Query: 605 E 605
E
Sbjct: 510 E 510
|
|
| UNIPROTKB|Q5ZJL1 GALNT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 207/419 (49%), Positives = 278/419 (66%)
Query: 186 CECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL 245
C+ T V+ + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR ML+EI+LVDDAS R+FL
Sbjct: 106 CK-TKVYADN-LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFL 163
Query: 246 KSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLV 305
K L+ YV KL VP VIR R GLI+ARL GA ++G+++ FLDAHCECT+GWLE L+
Sbjct: 164 KRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAASKGQVITFLDAHCECTVGWLEPLL 223
Query: 306 ARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365
AR+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T
Sbjct: 224 ARIKADRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRT 283
Query: 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425
P +TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV
Sbjct: 284 LPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVG 343
Query: 426 HLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLEL 485
H+FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SRL L
Sbjct: 344 HVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKV-DYGDISSRLGL 402
Query: 486 RKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLL 545
R++L+C F WYL +V+P +P G IR+V+T++C++ K N+ G +
Sbjct: 403 RRKLQCKPFSWYLENVYPDSQIPRHYFSLGEIRNVETNQCLDNMARKE--NEKVG---IF 457
Query: 546 PCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYD 603
C H Q+F + I TD+ +CLDV + ++ +L C Q W YD
Sbjct: 458 NC-HGMGGNQVFSYTANKE-IRTDD-LCLDVSKLNGPVT----MLKCHHLKGNQLWEYD 509
|
|
| UNIPROTKB|Q29121 GALNT1 "Polypeptide N-acetylgalactosaminyltransferase 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 206/419 (49%), Positives = 277/419 (66%)
Query: 186 CECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL 245
C+ T V+ + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR ML+EI+LVDDAS R+FL
Sbjct: 106 CK-TKVYPDN-LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFL 163
Query: 246 KSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLV 305
K L+ YV KL VP VIR R GLI+ARL GA ++G+++ FLDAHCECT+GWLE L+
Sbjct: 164 KRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLL 223
Query: 306 ARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365
AR+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T
Sbjct: 224 ARIKHDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRT 283
Query: 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425
P +TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV
Sbjct: 284 LPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVG 343
Query: 426 HLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLEL 485
H+FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SRL L
Sbjct: 344 HVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKTFFYIISPGVTKV-DYGDISSRLGL 402
Query: 486 RKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLL 545
R +L+C F WYL +++P +P G IR+V+T++C++ K N+ G +
Sbjct: 403 RHKLQCRPFSWYLENIYPDSQIPRHYSSLGEIRNVETNQCLDNMARKE--NEKVG---IF 457
Query: 546 PCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYD 603
C H Q+F + I TD+ +CLDV + ++ +L C Q W YD
Sbjct: 458 NC-HGMGGNQVFSYTANKE-IRTDD-LCLDVSKLNGPVT----MLKCHHLKGNQLWEYD 509
|
|
| UNIPROTKB|F1SAI6 LOC100738545 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 206/419 (49%), Positives = 277/419 (66%)
Query: 186 CECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL 245
C+ T V+ + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR ML+EI+LVDDAS R+FL
Sbjct: 106 CK-TKVYPDN-LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFL 163
Query: 246 KSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLV 305
K L+ YV KL VP VIR R GLI+ARL GA ++G+++ FLDAHCECT+GWLE L+
Sbjct: 164 KRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLL 223
Query: 306 ARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365
AR+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D T
Sbjct: 224 ARIKHDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRT 283
Query: 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425
P +TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV
Sbjct: 284 LPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVG 343
Query: 426 HLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLEL 485
H+FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SRL L
Sbjct: 344 HVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKV-DYGDISSRLGL 402
Query: 486 RKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLL 545
R +L+C F WYL +++P +P G IR+V+T++C++ K N+ G +
Sbjct: 403 RHKLQCRPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKE--NEKVG---IF 457
Query: 546 PCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYD 603
C H Q+F + I TD+ +CLDV + ++ +L C Q W YD
Sbjct: 458 NC-HGMGGNQVFSYTANKE-IRTDD-LCLDVSKLNGPVT----MLKCHHLKGNQLWEYD 509
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P34678 | GALT3_CAEEL | 2, ., 4, ., 1, ., 4, 1 | 0.5498 | 0.5454 | 0.5392 | yes | N/A |
| Q10473 | GALT1_RAT | 2, ., 4, ., 1, ., 4, 1 | 0.4508 | 0.6743 | 0.7298 | yes | N/A |
| Q10472 | GALT1_HUMAN | 2, ., 4, ., 1, ., 4, 1 | 0.4484 | 0.6776 | 0.7334 | yes | N/A |
| Q6WV17 | GALT5_DROME | 2, ., 4, ., 1, ., 4, 1 | 0.5061 | 0.6561 | 0.6301 | yes | N/A |
| O08912 | GALT1_MOUSE | 2, ., 4, ., 1, ., 4, 1 | 0.4506 | 0.6776 | 0.7334 | yes | N/A |
| Q29121 | GALT1_PIG | 2, ., 4, ., 1, ., 4, 1 | 0.4551 | 0.6776 | 0.7334 | yes | N/A |
| Q07537 | GALT1_BOVIN | 2, ., 4, ., 1, ., 4, 1 | 0.4551 | 0.6776 | 0.7334 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.766 |
| 4th Layer | 2.4.1.80 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.4.1.41 | 0.824 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 605 | |||
| cd02510 | 299 | cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo | 1e-157 | |
| cd02510 | 299 | cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo | 4e-44 | |
| pfam00535 | 168 | pfam00535, Glycos_transf_2, Glycosyl transferase f | 3e-27 | |
| pfam00535 | 168 | pfam00535, Glycos_transf_2, Glycosyl transferase f | 7e-18 | |
| cd00761 | 156 | cd00761, Glyco_tranf_GTA_type, Glycosyltransferase | 5e-14 | |
| TIGR03965 | 467 | TIGR03965, mycofact_glyco, mycofactocin system gly | 6e-12 | |
| pfam10111 | 278 | pfam10111, Glyco_tranf_2_2, Glycosyltransferase li | 2e-11 | |
| cd02525 | 249 | cd02525, Succinoglycan_BP_ExoA, ExoA is involved i | 8e-11 | |
| cd00761 | 156 | cd00761, Glyco_tranf_GTA_type, Glycosyltransferase | 5e-10 | |
| cd04192 | 229 | cd04192, GT_2_like_e, Subfamily of Glycosyltransfe | 2e-09 | |
| cd06439 | 251 | cd06439, CESA_like_1, CESA_like_1 is a member of t | 7e-09 | |
| cd04186 | 166 | cd04186, GT_2_like_c, Subfamily of Glycosyltransfe | 1e-08 | |
| cd06439 | 251 | cd06439, CESA_like_1, CESA_like_1 is a member of t | 2e-08 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 2e-08 | |
| cd02525 | 249 | cd02525, Succinoglycan_BP_ExoA, ExoA is involved i | 3e-07 | |
| COG1216 | 305 | COG1216, COG1216, Predicted glycosyltransferases [ | 7e-07 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 2e-06 | |
| COG0463 | 291 | COG0463, WcaA, Glycosyltransferases involved in ce | 2e-06 | |
| cd04179 | 185 | cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_l | 2e-06 | |
| cd04179 | 185 | cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_l | 2e-06 | |
| TIGR03965 | 467 | TIGR03965, mycofact_glyco, mycofactocin system gly | 3e-06 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 5e-06 | |
| cd04186 | 166 | cd04186, GT_2_like_c, Subfamily of Glycosyltransfe | 2e-05 | |
| cd02522 | 221 | cd02522, GT_2_like_a, GT_2_like_a represents a gly | 2e-05 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 6e-05 | |
| TIGR04283 | 220 | TIGR04283, glyco_like_mftF, transferase 2, rSAM/se | 6e-05 | |
| cd06420 | 182 | cd06420, GT2_Chondriotin_Pol_N, N-terminal domain | 7e-05 | |
| TIGR04283 | 220 | TIGR04283, glyco_like_mftF, transferase 2, rSAM/se | 1e-04 | |
| pfam02709 | 78 | pfam02709, Glyco_transf_7C, N-terminal domain of g | 3e-04 | |
| cd04192 | 229 | cd04192, GT_2_like_e, Subfamily of Glycosyltransfe | 4e-04 | |
| cd04184 | 202 | cd04184, GT2_RfbC_Mx_like, Myxococcus xanthus RfbC | 5e-04 | |
| cd04184 | 202 | cd04184, GT2_RfbC_Mx_like, Myxococcus xanthus RfbC | 5e-04 | |
| pfam13641 | 229 | pfam13641, Glyco_tranf_2_3, Glycosyltransferase li | 0.002 |
| >gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Score = 453 bits (1167), Expect = e-157
Identities = 165/303 (54%), Positives = 210/303 (69%), Gaps = 5/303 (1%)
Query: 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPT 260
S++I+FHNEA S LLRTVHSVI+R+P +LKEI+LVDD S + LK L+EY K
Sbjct: 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKV 60
Query: 261 RVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVI 320
+V+R R GLI+AR+ GAR A G++LVFLD+HCE +GWLE L+AR+AE+R VVCP+I
Sbjct: 61 KVLRLKKREGLIRARIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPII 120
Query: 321 DIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI 380
D+I TF Y S G F+W LHF+W + +R+ T P ++P MAGGLFAI
Sbjct: 121 DVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEE--RRRESPTAPIRSPTMAGGLFAI 178
Query: 381 DRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR-KASPYSFPGG 439
DR +F +G YDE M +WGGENLE+SF+VWQCGGSIEI PCS V H+FR K PY+FPGG
Sbjct: 179 DREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGG 238
Query: 440 VSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLT 499
VL N RVA VWMDE+ E+++K PE D + R LR++LKC SFKWYL
Sbjct: 239 SGTVLR-NYKRVAEVWMDEYKEYFYKARPELRNI-DYGDLSERKALRERLKCKSFKWYLE 296
Query: 500 HVW 502
+V+
Sbjct: 297 NVY 299
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299 |
| >gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Score = 158 bits (403), Expect = 4e-44
Identities = 55/97 (56%), Positives = 71/97 (73%)
Query: 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPT 152
S++I+FHNEA S LLRTVHSVI+R+P +LKEI+LVDD S + LK L+EY K
Sbjct: 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKV 60
Query: 153 RVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECT 189
+V+R R GLI+AR+ GAR A G++LVFLD+HCE
Sbjct: 61 KVLRLKKREGLIRARIAGARAATGDVLVFLDSHCEVN 97
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299 |
| >gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 3e-27
Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPT 260
S++I +NE L T+ S+++++ + EI++VDD ST +EY AK
Sbjct: 1 SVIIPTYNEE-KYLEETLESLLNQTYK--NFEIIVVDDGSTDG-TVEIAEEY-AKNDPRV 55
Query: 261 RVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVI 320
RVIR +G AR G + A G+ + FLDA E WLE LV + ++ +V
Sbjct: 56 RVIRLEENLGKAAARNAGLKLATGDYIAFLDADDEVAPDWLEKLVELLEKNGADIVIGSR 115
Query: 321 DIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI 380
+I+ T Y R+ +L R F + A +
Sbjct: 116 VVINGETRLYGRALRFELLLLLGKLGARSL------------GLKVLFLIGSNALYRREV 163
Query: 381 DRAYF 385
Sbjct: 164 LEELL 168
|
Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168 |
| >gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 7e-18
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPT 152
S++I +NE L T+ S+++++ + EI++VDD ST +EY AK
Sbjct: 1 SVIIPTYNEE-KYLEETLESLLNQTYK--NFEIIVVDDGSTDG-TVEIAEEY-AKNDPRV 55
Query: 153 RVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPK 199
RVIR +G AR G + A G+ + FLDA E ++L K
Sbjct: 56 RVIRLEENLGKAAARNAGLKLATGDYIAFLDADDEVA----PDWLEK 98
|
Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168 |
| >gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 5e-14
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTR 261
++I +NE L R + S+++++ + E+++VDD ST L+ L+EY K R
Sbjct: 1 VIIPAYNEE-PYLERCLESLLAQTYPNF--EVIVVDDGSTDGTLEI-LEEYAKKDPRVIR 56
Query: 262 VIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317
VI + GL AR G + A GE ++FLDA WLE LVA + D
Sbjct: 57 VINEENQ-GLAAARNAGLKAARGEYILFLDADDLLLPDWLERLVAELLADPEADAV 111
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156 |
| >gnl|CDD|234419 TIGR03965, mycofact_glyco, mycofactocin system glycosyltransferase | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 6e-12
Identities = 77/296 (26%), Positives = 119/296 (40%), Gaps = 50/296 (16%)
Query: 151 PTRVIRSPGRVGLIKARLLGARQAEGEIL------VFLDAHCECTLVFNEEFLPKS---- 200
P R++R + ARLLG + G + L + +V L S
Sbjct: 21 PLRLLR----LAPAAARLLGGGRGGGLEVRDETSAALLRRLLDSGVVHPRPALLPSPPSV 76
Query: 201 SIVIVFHNEAWSALLRTVHSVISRS-PRSMLKEILLVDDASTREFLKSSLDEYVAKLSVP 259
++V+ N + L R + ++++ PR L E+++VDD S +P
Sbjct: 77 TVVVPVRNRP-AGLARLLAALLALDYPRDRL-EVIVVDDGSEDP----VPTRAARGARLP 130
Query: 260 TRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVA-----RVAEDRTR 314
RVIR P R G AR GAR A E + F D+ GWL L+A VA R
Sbjct: 131 VRVIRHPRRQGPAAARNAGARAARTEFVAFTDSDVVPRPGWLRALLAHFDDPGVALVAPR 190
Query: 315 VVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW-YTYGSSDAIIKRKDFTEPFKTPAM 373
VV + + VRS L G + R +Y S A++ R
Sbjct: 191 VVALPAEDTRLARYEAVRS-SLDLGPEEAVVRPRGPVSYVPSAALLVR------------ 237
Query: 374 AGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429
R +G +DE ++V GE++++ +R+ + GG + P + VAH R
Sbjct: 238 --------RRALLEVGGFDERLEV--GEDVDLCWRLCEAGGRVRYEPAAVVAHDHR 283
|
Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin. Length = 467 |
| >gnl|CDD|220577 pfam10111, Glyco_tranf_2_2, Glycosyltransferase like family 2 | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 49/246 (19%), Positives = 84/246 (34%), Gaps = 30/246 (12%)
Query: 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLK---EILLVDDASTREF---LKSSLDE-- 251
S I+ V+ + +L+ + S ++R + EI++VD S F LK + +
Sbjct: 1 SVIIPVYLSLRTRDILKRLQSCLNRLSYFLSDPDVEIIVVDGDSPLSFAKELKKIIAKNG 60
Query: 252 --YVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVA 309
+ SP KAR GA + + + FLD C + LE ++
Sbjct: 61 AINYISHKTHKDLF-SPA-----KARNRGAEYSSSDFIFFLDVDCLISPDTLEKIIKHFQ 114
Query: 310 EDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFK 369
E +T + ++ F L Y I T
Sbjct: 115 ELQTNPNAFLALPCLYLSKEGSEIF----------LSDFKYL---LREEILEDAITGKST 161
Query: 370 TPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429
A+A I+R +F IG +DE + GGE+ E+ +R+ + +
Sbjct: 162 FFALASSCILINRDFFLKIGGFDENFRGHGGEDFELLYRLLLYYKKFPPPK-DLLTYDEY 220
Query: 430 KASPYS 435
K
Sbjct: 221 KWPITY 226
|
Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 278 |
| >gnl|CDD|133016 cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 8e-11
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 29/220 (13%)
Query: 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAKLS 257
SI+I NE + + S++++S L EI++VD S TRE ++ A
Sbjct: 3 SIIIPVRNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQE-----YAAKD 56
Query: 258 VPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317
R+I +P R+ +G R + G+I++ +DAH ++ LV A RT
Sbjct: 57 PRIRLIDNPKRI-QSAGLNIGIRNSRGDIIIRVDAHAVYPKDYILELVE--ALKRTGADN 113
Query: 318 PVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY-GSSDAIIKRKDFTEPFKTPAMAGG 376
+ + F + + GS + + + + G
Sbjct: 114 VGGPMETIGE-----------SKFQKAIAVAQSSPLGSGGSAYRGGAV-KIGYVDTVHHG 161
Query: 377 LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416
+ R F +G +DE + E+ E+++R+ + G I
Sbjct: 162 AY--RREVFEKVGGFDESLVR--NEDAELNYRLRKAGYKI 197
|
Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. Length = 249 |
| >gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 5e-10
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTR 153
++I +NE L R + S+++++ + E+++VDD ST L+ L+EY K R
Sbjct: 1 VIIPAYNEE-PYLERCLESLLAQTYPNF--EVIVVDDGSTDGTLEI-LEEYAKKDPRVIR 56
Query: 154 VIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECT----LVFNEEFLPKSSIVIVFHNE 209
VI + GL AR G + A GE ++FLDA E L V
Sbjct: 57 VINEENQ-GLAAARNAGLKAARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP- 114
Query: 210 AWSALLRTVHSVISRSPRSMLKEILLVDDA 239
+ L R R +L+EI D+A
Sbjct: 115 -GNLLFR----------RELLEEIGGFDEA 133
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156 |
| >gnl|CDD|133035 cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 33/208 (15%)
Query: 202 IVIVFHNEAWSALLRTVHSVISRS-PRSMLKEILLVDDAS---TREFLKSSLDE--YVAK 255
+VI NEA + L R + S+ + P+ E++LVDD S T + L+ + + + K
Sbjct: 1 VVIAARNEAEN-LPRLLQSLSALDYPKEKF-EVILVDDHSTDGTVQILEFAAAKPNFQLK 58
Query: 256 LSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRV 315
+ +RV S + L A + A+G+ +V DA C WL VA + +++ +
Sbjct: 59 ILNNSRVSISGKKNALTTA----IKAAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGL 114
Query: 316 VC-PVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMA 374
V PVI A + + G P M
Sbjct: 115 VAGPVIYFKGKSLLAKFQRLD------------WLSLLGLIAGSFG-------LGKPFMC 155
Query: 375 GGL-FAIDRAYFFHIGAYDEEMQVWGGE 401
G A + FF +G ++ + G+
Sbjct: 156 NGANMAYRKEAFFEVGGFEGNDHIASGD 183
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 229 |
| >gnl|CDD|133061 cd06439, CESA_like_1, CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 7e-09
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 19/117 (16%)
Query: 75 RKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST- 133
R + + +LP +I+I +NE + + + ++++ EI++V D ST
Sbjct: 14 RLRPKPPSLPDPAYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTD 72
Query: 134 ------REFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 184
RE+ + +++R P R G A A GEI+VF DA
Sbjct: 73 GTAEIAREYADKGV-----------KLLRFPERRGKAAALNRALALATGEIVVFTDA 118
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Length = 251 |
| >gnl|CDD|133029 cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 1e-08
Identities = 42/227 (18%), Positives = 84/227 (37%), Gaps = 63/227 (27%)
Query: 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTR 261
I+IV +N + L + S+++++ E+++VD+AST + E + +L R
Sbjct: 1 IIIVNYN-SLEYLKACLDSLLAQTYPD--FEVIVVDNASTDGSV-----ELLRELFPEVR 52
Query: 262 VIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAED-RTRVVCPVI 320
+IR+ +G G R+A+G+ ++ L+ G L L+ +D +V P +
Sbjct: 53 LIRNGENLGFGAGNNQGIREAKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPKV 112
Query: 321 DIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI 380
GAF +
Sbjct: 113 -----------------SGAF------------------------------------LLV 119
Query: 381 DRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427
R F +G +DE+ ++ E++++ R G + P + + H
Sbjct: 120 RREVFEEVGGFDEDFFLY-YEDVDLCLRARLAGYRVLYVPQAVIYHH 165
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 166 |
| >gnl|CDD|133061 cd06439, CESA_like_1, CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 21/162 (12%)
Query: 189 TLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST------- 241
+ + +LP +I+I +NE + + + ++++ EI++V D ST
Sbjct: 20 PSLPDPAYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIA 78
Query: 242 REFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWL 301
RE+ + +++R P R G A A GEI+VF DA+ L
Sbjct: 79 REYADKGV-----------KLLRFPERRGKAAALNRALALATGEIVVFTDANALLDPDAL 127
Query: 302 ENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNW 343
LV A+ V + I+ L+W NW
Sbjct: 128 RLLVRHFADPSVGAVSGELVIVDGGGSG--SGEGLYWKYENW 167
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Length = 251 |
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 2e-08
Identities = 46/204 (22%), Positives = 75/204 (36%), Gaps = 38/204 (18%)
Query: 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLK------EILLVDDASTREFLKSSLDEYVAK 255
I++ +NE +VI R+ S+L E+++VDD ST + L+ L+E A
Sbjct: 1 IIVPAYNEE---------AVIERTIESLLALDYPKLEVIVVDDGSTDDTLEI-LEELAAL 50
Query: 256 LSVPTRVIRSPGRVGLIKARLL--GARQAEGEILVFLDAHCECTLGWLENLVARVAED-R 312
V+R G KA L G R A+G+I+V LDA L+ LV D +
Sbjct: 51 YIRRVLVVRDKENGG--KAGALNAGLRHAKGDIVVVLDADTILEPDALKRLVVPFFADPK 108
Query: 313 TRVVCPVIDIISDVTFAYVRSFEL-HWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTP 371
V + + + R + + F +
Sbjct: 109 VGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSAL----------------GGVL 152
Query: 372 AMAGGLFAIDRAYFFHIGAYDEEM 395
++G A R +G +DE+
Sbjct: 153 VLSGAFGAFRREALREVGGWDEDT 176
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. Length = 180 |
| >gnl|CDD|133016 cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 3e-07
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAKLS 149
SI+I NE + + S++++S L EI++VD S TRE ++ A
Sbjct: 3 SIIIPVRNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQE-----YAAKD 56
Query: 150 VPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCE 187
R+I +P R+ +G R + G+I++ +DAH
Sbjct: 57 PRIRLIDNPKRI-QSAGLNIGIRNSRGDIIIRVDAHAV 93
|
Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. Length = 249 |
| >gnl|CDD|224137 COG1216, COG1216, Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 7e-07
Identities = 57/277 (20%), Positives = 105/277 (37%), Gaps = 24/277 (8%)
Query: 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS 257
PK SI+IV +N L+ + S+ +++ I++VD+ ST SL+ A+
Sbjct: 3 PKISIIIVTYNRG-EDLVECLASLAAQTYPD--DVIVVVDNGSTDG----SLEALKARFF 55
Query: 258 VPTRVIRSPGRVGLIKARLLGARQAEGE---ILVFLDAHCECTLGWLENLVARVAEDRTR 314
R+I + +G G + A + ++ L+ LE L+ ED
Sbjct: 56 PNVRLIENGENLGFAGGFNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAA 115
Query: 315 -VVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAM 373
VV P+I + + R G + L W + + E ++
Sbjct: 116 GVVGPLIRNYDESLYIDRR------GGESDGLTGGWRASPLLEIAPDLSSYLEVV--ASL 167
Query: 374 AGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASP 433
+G I R F +G +DE ++ E++++ R + G I P + + H +S
Sbjct: 168 SGACLLIRREAFEKVGGFDERFFIYY-EDVDLCLRARKAGYKIYYVPDAIIYH-KIGSSK 225
Query: 434 YSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEA 470
S G Y +L R + + + +P
Sbjct: 226 GSSILG---TFYYHLRRNRIYFAKLNEKGLLLRSPLR 259
|
Length = 305 |
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 2e-06
Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 26/238 (10%)
Query: 192 FNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSS 248
++ LPK S++I +NE L T+ S++S+ E+++VDD S T E L+
Sbjct: 48 DADKLLPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEEL 105
Query: 249 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308
EY V + G A G ++A+G+++V LDA L LV+
Sbjct: 106 GAEYGPNFRV---IYPEKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVSPF 162
Query: 309 AEDRTRVVCPVIDIISDVTFA-YVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEP 367
+ V I + + + + + +FR S +I
Sbjct: 163 EDPPVGAVVGTPRIRNRPDPSNLLGRIQAIE--YLSAFYFRL-RAASKGGLI-------- 211
Query: 368 FKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425
++G A R+ +G + E+ E+ +++ R+ G + P + V
Sbjct: 212 ---SFLSGSSSAFRRSALEEVGGWLEDT---ITEDADLTLRLHLRGYRVVYVPEAIVW 263
|
Length = 439 |
| >gnl|CDD|223539 COG0463, WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 49.7 bits (117), Expect = 2e-06
Identities = 52/289 (17%), Positives = 91/289 (31%), Gaps = 23/289 (7%)
Query: 88 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEY 144
+PK S+VI +NE L + S+++++ + EI++VDD S T E +
Sbjct: 1 MMPKVSVVIPTYNEE-EYLPEALESLLNQTYK--DFEIIVVDDGSTDGTTEIAIEYGAKD 57
Query: 145 VAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHC--ECTLVFNEEFLPKSSI 202
V + + GL AR G A G+ +VFLDA L+
Sbjct: 58 V-----RVIRLINERNGGLGAARNAGLEYARGDYIVFLDADDQHPPELIPLVAAGGDGDY 112
Query: 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRV 262
+ + L R + S + + + L +L+ D L + +
Sbjct: 113 IARLDDRDDIWLPRKLLSKLVKLLGNRLLGVLIPDGFGDLRLLVRDAVDGLRAFLEGRSR 172
Query: 263 IRSPGRVGLIK------ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
L+ LL R V L L L++ + V D ++
Sbjct: 173 FLRLLLRKLVLIRREVLEYLLLYRLLGASKRVLLGKLLRLGLLLLDSKLKAVPLDLLLLL 232
Query: 317 CPVIDIISDV----TFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKR 361
I ++S + R + L +
Sbjct: 233 GLFIALLSILLLLLLLLLRRLLGANLSEKGKPLLLIKLLILLKLILRLL 281
|
Length = 291 |
| >gnl|CDD|133022 cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAKLSV 150
+VI +NE + V +++ EI++VDD S T E +
Sbjct: 1 VVIPAYNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRV--- 56
Query: 151 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 184
RVIR G A G + A G+I+V +DA
Sbjct: 57 --RVIRLSRNFGKGAAVRAGFKAARGDIVVTMDA 88
|
DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 185 |
| >gnl|CDD|133022 cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAKLSV 258
+VI +NE + V +++ EI++VDD S T E +
Sbjct: 1 VVIPAYNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRV--- 56
Query: 259 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 292
RVIR G A G + A G+I+V +DA
Sbjct: 57 --RVIRLSRNFGKGAAVRAGFKAARGDIVVTMDA 88
|
DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 185 |
| >gnl|CDD|234419 TIGR03965, mycofact_glyco, mycofactocin system glycosyltransferase | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-06
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 89 LPKSSIVIVFHNEAWSALLRTVHSVISRS-PRSMLKEILLVDDASTREFLKSSLDEYVAK 147
P ++V+ N + L R + ++++ PR L E+++VDD S
Sbjct: 73 PPSVTVVVPVRNRP-AGLARLLAALLALDYPRDRL-EVIVVDDGSEDP----VPTRAARG 126
Query: 148 LSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCE 187
+P RVIR P R G AR GAR A E + F D+
Sbjct: 127 ARLPVRVIRHPRRQGPAAARNAGARAARTEFVAFTDSDVV 166
|
Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin. Length = 467 |
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
Query: 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLK------EILLVDDASTREFLKSSLDEYVAK 147
I++ +NE +VI R+ S+L E+++VDD ST + L+ L+E A
Sbjct: 1 IIVPAYNEE---------AVIERTIESLLALDYPKLEVIVVDDGSTDDTLEI-LEELAAL 50
Query: 148 LSVPTRVIRSPGRVGLIKARLL--GARQAEGEILVFLDA 184
V+R G KA L G R A+G+I+V LDA
Sbjct: 51 YIRRVLVVRDKENGG--KAGALNAGLRHAKGDIVVVLDA 87
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. Length = 180 |
| >gnl|CDD|133029 cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTR 153
I+IV +N + L + S+++++ E+++VD+AST + E + +L R
Sbjct: 1 IIIVNYN-SLEYLKACLDSLLAQTYPD--FEVIVVDNASTDGSV-----ELLRELFPEVR 52
Query: 154 VIRSPGRVGLIKARLLGARQAEGEILVFLD 183
+IR+ +G G R+A+G+ ++ L+
Sbjct: 53 LIRNGENLGFGAGNNQGIREAKGDYVLLLN 82
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 166 |
| >gnl|CDD|133013 cd02522, GT_2_like_a, GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 57/216 (26%), Positives = 76/216 (35%), Gaps = 57/216 (26%)
Query: 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVP 259
SI+I NEA L R + S+ +P EI++VD ST D VA S
Sbjct: 2 SIIIPTLNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGST--------DGTVAIARSAG 50
Query: 260 TRVIRS-PGRVGLIKARLL--GARQAEGEILVFLDAHCECTL--GWLENLVARVAEDRTR 314
VI S GR AR + GA A G+ L+FL H + L W ++ + D
Sbjct: 51 VVVISSPKGR-----ARQMNAGAAAARGDWLLFL--HADTRLPPDWDAAIIETLRADGAV 103
Query: 315 VVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMA 374
+ L GA L R F P
Sbjct: 104 AGAFRLRFDDPGPRL----RLLELGAN---LRSRL------------------FGLPYGD 138
Query: 375 GGLFAIDRAYFFHIGAYDEE--MQVWGGENLEMSFR 408
GLF I R F +G + E M E++E+ R
Sbjct: 139 QGLF-IRRELFEELGGFPELPLM-----EDVELVRR 168
|
Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 221 |
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 6e-05
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 70 TLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVD 129
LP R K K ++ LPK S++I +NE L T+ S++S+ E+++VD
Sbjct: 35 VLPLSRPRK-KLPKDADKLLPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVD 91
Query: 130 DAS---TREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 184
D S T E L+ EY V + G A G ++A+G+++V LDA
Sbjct: 92 DGSTDETYEILEELGAEYGPNFRV---IYPEKKNGGKAGALNNGLKRAKGDVVVILDA 146
|
Length = 439 |
| >gnl|CDD|234532 TIGR04283, glyco_like_mftF, transferase 2, rSAM/selenodomain-associated | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 6e-05
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 33/127 (25%)
Query: 201 SIVIVFHNEA--WSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAK 255
SI+I NEA LL + ++ + E+++VD S T E +S
Sbjct: 2 SIIIPVLNEAATLPELLADLQALPGDA------EVIVVDGGSTDGTVEIARSLGA----- 50
Query: 256 LSVPTRVIRSP-GRVGLIKARLL--GARQAEGEILVFLDAHCECTL--GWLENLVARVAE 310
+VI SP GR AR + GA A+G+IL+FL H + L +LE + +A
Sbjct: 51 -----KVIHSPKGR-----ARQMNAGAALAKGDILLFL--HADTRLPKDFLEAIRRALAP 98
Query: 311 DRTRVVC 317
C
Sbjct: 99 PGAVAGC 105
|
This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine [Unknown function, Enzymes of unknown specificity]. Length = 220 |
| >gnl|CDD|133042 cd06420, GT2_Chondriotin_Pol_N, N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 45/221 (20%), Positives = 78/221 (35%), Gaps = 62/221 (28%)
Query: 202 IVIVFHNEAWS-ALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPT 260
++I +N AL + SV+++S + E+++ DD ST E K ++E+ ++ +P
Sbjct: 1 LIITTYN--RPEALELVLKSVLNQS--ILPFEVIIADDGSTEE-TKELIEEFKSQFPIPI 55
Query: 261 RVIRSPGRVG--LIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCP 318
+ + G K R A+G+ L+F+D C P
Sbjct: 56 KHVWQED-EGFRKAKIRNKAIAAAKGDYLIFIDGDC----------------------IP 92
Query: 319 VIDIISDVTFAYVRSFELHWGAFNWELHFR-----WYTYGSSDAIIKRKDFTEPFKTPAM 373
D I+D H + GS R E +
Sbjct: 93 HPDFIAD--------------------HIELAEPGVFLSGS------RVLLNEKLTERGI 126
Query: 374 AGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGG 414
G + + + +DEE WGGE+ E+ R+ G
Sbjct: 127 RGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGI 167
|
Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix. Length = 182 |
| >gnl|CDD|234532 TIGR04283, glyco_like_mftF, transferase 2, rSAM/selenodomain-associated | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 31/106 (29%)
Query: 93 SIVIVFHNEA--WSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAK 147
SI+I NEA LL + ++ + E+++VD S T E +S
Sbjct: 2 SIIIPVLNEAATLPELLADLQALPGDA------EVIVVDGGSTDGTVEIARSLGA----- 50
Query: 148 LSVPTRVIRSP-GRVGLIKARLL--GARQAEGEILVFLDAHCECTL 190
+VI SP GR AR + GA A+G+IL+FL H + L
Sbjct: 51 -----KVIHSPKGR-----ARQMNAGAALAKGDILLFL--HADTRL 84
|
This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine [Unknown function, Enzymes of unknown specificity]. Length = 220 |
| >gnl|CDD|217196 pfam02709, Glyco_transf_7C, N-terminal domain of galactosyltransferase | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 3e-04
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 374 AGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH-VAHLFR 429
GG+ A + F + + WGGE+ ++ R+ G IE + H+ R
Sbjct: 20 FGGVLAFSKEDFLKVNGFSNNFWGWGGEDDDLYARLLLAGLKIERPKFAIGRYHMLR 76
|
This is the N-terminal domain of a family of galactosyltransferases from a wide range of Metazoa with three related galactosyltransferases activities, all three of which are possessed by one sequence in some cases. EC:2.4.1.90, N-acetyllactosamine synthase; EC:2.4.1.38, Beta-N-acetylglucosaminyl-glycopeptide beta-1,4- galactosyltransferase; and EC:2.4.1.22 Lactose synthase. Note that N-acetyllactosamine synthase is a component of Lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin EC:2.4.1.90 is the catalyzed reaction. Length = 78 |
| >gnl|CDD|133035 cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 94 IVIVFHNEAWSALLRTVHSVISRS-PRSMLKEILLVDDAS---TREFLKSSLDE--YVAK 147
+VI NEA + L R + S+ + P+ E++LVDD S T + L+ + + + K
Sbjct: 1 VVIAARNEAEN-LPRLLQSLSALDYPKEKF-EVILVDDHSTDGTVQILEFAAAKPNFQLK 58
Query: 148 LSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHC 186
+ +RV S + L A + A+G+ +V DA C
Sbjct: 59 ILNNSRVSISGKKNALTTA----IKAAKGDWIVTTDADC 93
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 229 |
| >gnl|CDD|133027 cd04184, GT2_RfbC_Mx_like, Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS 149
P SIV+ +N L + SV +++ + E+ + DDAST +K L +Y A+
Sbjct: 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNW--ELCIADDASTDPEVKRVLKKYAAQDP 58
Query: 150 VPTRVIRSPGRVGLIKARLLGARQAEGEILVFLD 183
+V+ G+ A A GE + LD
Sbjct: 59 R-IKVVFREENGGISAATNSALELATGEFVALLD 91
|
The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Length = 202 |
| >gnl|CDD|133027 cd04184, GT2_RfbC_Mx_like, Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS 257
P SIV+ +N L + SV +++ + E+ + DDAST +K L +Y A+
Sbjct: 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNW--ELCIADDASTDPEVKRVLKKYAAQDP 58
Query: 258 VPTRVIRSPGRVGLIKARLLGARQAEGEILVFLD 291
+V+ G+ A A GE + LD
Sbjct: 59 R-IKVVFREENGGISAATNSALELATGEFVALLD 91
|
The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Length = 202 |
| >gnl|CDD|222281 pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2 | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 53/239 (22%), Positives = 80/239 (33%), Gaps = 35/239 (14%)
Query: 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVD--DASTREFLKSSLDEYVAK 255
P+ ++V+ NE L RT+ S I L+ I++VD D T + E A
Sbjct: 1 PRVAVVVPTWNED-KVLGRTLRS-ILAQDYPRLEVIVVVDGSDDETLDVA----RELAAA 54
Query: 256 LS-VPTRVIRSPGRVGLI-KARLL--GARQAEGEILVFLDAHCECTLGWLENLVARVAED 311
V V+R P G KAR L R + +++V LDA V D
Sbjct: 55 YPDVRVHVVRRPRPPGPTGKARALNEALRAIKSDLVVLLDADS------------VVDPD 102
Query: 312 RTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDA--IIKRKDFTEPFK 369
R + P V F L+ Y A ++
Sbjct: 103 TLRRLLPFFLS-KGVGAVQGPVFVLNLR------TAVAPLYALEFALRHLRFMALRRALG 155
Query: 370 TPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428
+AG R+ IG +D + E+ E+ R+ + G P + V L
Sbjct: 156 VAPLAGSGSLFRRSVLEEIGGFDPGFLLG--EDKELGLRLRRAGWRTAYVPGAAVYELS 212
|
Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 229 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 605 | |||
| KOG3736|consensus | 578 | 100.0 | ||
| KOG3738|consensus | 559 | 100.0 | ||
| KOG3737|consensus | 603 | 100.0 | ||
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 100.0 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.95 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.95 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 99.94 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.94 | |
| KOG3736|consensus | 578 | 99.94 | ||
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.93 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.93 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.93 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.93 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 99.93 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.93 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.93 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 99.93 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 99.92 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.92 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.92 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.92 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.92 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 99.92 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 99.92 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.92 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 99.91 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.91 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.91 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.91 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 99.91 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.9 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.9 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.9 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 99.9 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.9 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.89 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 99.89 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 99.88 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 99.88 | |
| KOG3737|consensus | 603 | 99.87 | ||
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.86 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 99.85 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 99.84 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 99.83 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.82 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 99.81 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 99.81 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.78 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.77 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 99.74 | |
| KOG2978|consensus | 238 | 99.74 | ||
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 99.73 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 99.73 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 99.72 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.72 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.72 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 99.71 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 99.7 | |
| KOG3738|consensus | 559 | 99.7 | ||
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.67 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 99.67 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.65 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 99.65 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.63 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.62 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.62 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.62 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 99.62 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 99.61 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.59 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.58 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 99.58 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.58 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.58 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 99.58 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 99.57 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.56 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.56 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.56 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 99.55 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 99.55 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.54 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 99.54 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.54 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 99.54 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 99.53 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 99.53 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.53 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 99.52 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.52 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 99.5 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 99.47 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 99.46 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.46 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.45 | |
| PF13712 | 217 | Glyco_tranf_2_5: Glycosyltransferase like family; | 99.45 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.44 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.44 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.43 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 99.43 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 99.42 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.42 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 99.41 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.41 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 99.4 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.38 | |
| KOG2978|consensus | 238 | 99.37 | ||
| cd00899 | 219 | b4GalT Beta-4-Galactosyltransferase is involved in | 99.34 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 99.33 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.32 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.31 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.3 | |
| KOG2977|consensus | 323 | 99.23 | ||
| KOG2977|consensus | 323 | 99.22 | ||
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 99.21 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.13 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 99.09 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.07 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 99.07 | |
| KOG3588|consensus | 494 | 99.05 | ||
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 99.04 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.04 | |
| COG4092 | 346 | Predicted glycosyltransferase involved in capsule | 98.99 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 98.99 | |
| PF02709 | 78 | Glyco_transf_7C: N-terminal domain of galactosyltr | 98.99 | |
| PF00652 | 124 | Ricin_B_lectin: Ricin-type beta-trefoil lectin dom | 98.97 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 98.94 | |
| cd00161 | 124 | RICIN Ricin-type beta-trefoil; Carbohydrate-bindin | 98.9 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 98.85 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 98.83 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 98.8 | |
| cd00161 | 124 | RICIN Ricin-type beta-trefoil; Carbohydrate-bindin | 98.8 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 98.7 | |
| KOG2547|consensus | 431 | 98.69 | ||
| KOG3916|consensus | 372 | 98.68 | ||
| smart00458 | 117 | RICIN Ricin-type beta-trefoil. Carbohydrate-bindin | 98.68 | |
| PF05679 | 499 | CHGN: Chondroitin N-acetylgalactosaminyltransferas | 98.64 | |
| smart00458 | 117 | RICIN Ricin-type beta-trefoil. Carbohydrate-bindin | 98.59 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 98.55 | |
| PF00652 | 124 | Ricin_B_lectin: Ricin-type beta-trefoil lectin dom | 98.44 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 98.36 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 98.33 | |
| PF11397 | 343 | GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP | 98.24 | |
| PF03071 | 434 | GNT-I: GNT-I family; InterPro: IPR004139 The biosy | 97.85 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 97.85 | |
| PF03452 | 269 | Anp1: Anp1; InterPro: IPR005109 The members of thi | 97.26 | |
| PF13704 | 97 | Glyco_tranf_2_4: Glycosyl transferase family 2 | 96.92 | |
| PLN02189 | 1040 | cellulose synthase | 96.9 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 96.85 | |
| PF13896 | 317 | Glyco_transf_49: Glycosyl-transferase for dystrogl | 96.85 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 96.71 | |
| PLN02195 | 977 | cellulose synthase A | 96.54 | |
| PF13704 | 97 | Glyco_tranf_2_4: Glycosyl transferase family 2 | 96.52 | |
| PF13712 | 217 | Glyco_tranf_2_5: Glycosyltransferase like family; | 96.35 | |
| KOG3917|consensus | 310 | 96.3 | ||
| PF11735 | 241 | CAP59_mtransfer: Cryptococcal mannosyltransferase | 96.21 | |
| PF09488 | 381 | Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas | 95.99 | |
| KOG2547|consensus | 431 | 95.94 | ||
| PF11316 | 234 | Rhamno_transf: Putative rhamnosyl transferase ; In | 95.42 | |
| TIGR02460 | 381 | osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | 95.08 | |
| PRK14503 | 393 | mannosyl-3-phosphoglycerate synthase; Provisional | 95.03 | |
| PLN02190 | 756 | cellulose synthase-like protein | 94.92 | |
| KOG2571|consensus | 862 | 94.81 | ||
| PF09258 | 247 | Glyco_transf_64: Glycosyl transferase family 64 do | 94.67 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 94.65 | |
| PF13733 | 136 | Glyco_transf_7N: N-terminal region of glycosyl tra | 94.07 | |
| PLN02436 | 1094 | cellulose synthase A | 94.01 | |
| PLN02400 | 1085 | cellulose synthase | 93.99 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 93.54 | |
| PF03452 | 269 | Anp1: Anp1; InterPro: IPR005109 The members of thi | 93.45 | |
| PF03214 | 348 | RGP: Reversibly glycosylated polypeptide; InterPro | 93.38 | |
| PF01762 | 195 | Galactosyl_T: Galactosyltransferase; InterPro: IPR | 93.28 | |
| PF09488 | 381 | Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas | 93.15 | |
| PF03071 | 434 | GNT-I: GNT-I family; InterPro: IPR004139 The biosy | 93.11 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 92.17 | |
| PLN02917 | 293 | CMP-KDO synthetase | 91.79 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 91.73 | |
| COG4092 | 346 | Predicted glycosyltransferase involved in capsule | 91.68 | |
| KOG1413|consensus | 411 | 91.65 | ||
| PF04666 | 297 | Glyco_transf_54: N-Acetylglucosaminyltransferase-I | 91.49 | |
| PRK15480 | 292 | glucose-1-phosphate thymidylyltransferase RfbA; Pr | 91.44 | |
| TIGR02460 | 381 | osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | 91.43 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 91.4 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 91.34 | |
| PF06306 | 347 | CgtA: Beta-1,4-N-acetylgalactosaminyltransferase ( | 90.5 | |
| cd00218 | 223 | GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) | 90.4 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 90.38 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 90.34 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 90.26 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 89.78 | |
| PF05060 | 356 | MGAT2: N-acetylglucosaminyltransferase II (MGAT2); | 89.7 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 89.39 | |
| PRK14503 | 393 | mannosyl-3-phosphoglycerate synthase; Provisional | 89.14 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 89.01 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 88.51 | |
| PF06306 | 347 | CgtA: Beta-1,4-N-acetylgalactosaminyltransferase ( | 88.38 | |
| PLN02458 | 346 | transferase, transferring glycosyl groups | 88.36 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 88.28 | |
| TIGR01207 | 286 | rmlA glucose-1-phosphate thymidylyltransferase, sh | 88.11 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 87.54 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 87.43 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 86.88 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 85.58 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 85.51 | |
| KOG1476|consensus | 330 | 85.17 | ||
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 84.83 | |
| cd02509 | 274 | GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf | 84.34 | |
| PLN03180 | 346 | reversibly glycosylated polypeptide; Provisional | 83.81 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 82.19 | |
| PF03498 | 150 | CDtoxinA: Cytolethal distending toxin A/C family; | 81.98 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 81.54 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 80.17 |
| >KOG3736|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-92 Score=745.07 Aligned_cols=436 Identities=49% Similarity=0.917 Sum_probs=393.5
Q ss_pred chHHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceE
Q psy10463 46 SDAQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEI 125 (605)
Q Consensus 46 ~~~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~Ei 125 (605)
...+.+|++++||+++||+|+++|++||+|++.|+...+..+.+|.+||||++|||+|+.|.++|.||++++++
T Consensus 98 ~~~~~~~~~~~~N~~~Sd~I~l~Rsl~D~r~~~C~~~~~~~~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~------ 171 (578)
T KOG3736|consen 98 DLEDEGYEKNAFNALLSDRISLNRSLPDLRHPECKKLKYYSDKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPP------ 171 (578)
T ss_pred HHHHHHhhcccchhhhhhcccccCCCcchhchhhhhccccccccCCCceEEEEecCCCcchhheEEeehccCCh------
Confidence 35677799999999999999999999999999998745443779999999999999977766666666666544
Q ss_pred EEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEE
Q psy10463 126 LLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIV 205 (605)
Q Consensus 126 ivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp 205 (605)
T Consensus 172 -------------------------------------------------------------------------------- 171 (578)
T KOG3736|consen 172 -------------------------------------------------------------------------------- 171 (578)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCC
Q psy10463 206 FHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGE 285 (605)
Q Consensus 206 ~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd 285 (605)
.++.|||+|||+|+.+.+...++++.+.+. .+++++++++.|+++||+.|++.|+||
T Consensus 172 ----------------------~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~-~v~i~r~~~R~GLIrARl~GA~~A~ge 228 (578)
T KOG3736|consen 172 ----------------------YLLKEIILVDDFSDRDHLKDKLEEYVKRFS-KVRILRTKKREGLIRARLLGASMATGE 228 (578)
T ss_pred ----------------------hHeEEEEEeecCcchhhhhhhhHHHHhhhc-ceeEEeecchhhhHHHHhhhhhhhhch
Confidence 444688888888877776767888999888 599999999999999999999999999
Q ss_pred EEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCC
Q psy10463 286 ILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365 (605)
Q Consensus 286 ~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 365 (605)
+++|||+||+++.+||++|++++.+++..+|+|+||.|+.++|.|.......+|+|+|.+.|+|..+|...... ...++
T Consensus 229 VL~FLDsHcE~n~gWLePLL~~I~~~r~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~f~w~~lP~~~~~~-~~~~t 307 (578)
T KOG3736|consen 229 VLTFLDSHCEVNVGWLEPLLARIAEDRKTVVCPVIDVIDDNTFEYEKQSELMRGGFDWELTFKWERLPLPEEKR-RELPT 307 (578)
T ss_pred heeeeecceeEecCcchHHHHHhhhcCceeecceEEeecCcCceecccCccceeeeecceeEEeccCCccHhhc-ccCCC
Confidence 99999999999999999999999999999999999999999999999777779999999999999999887766 45568
Q ss_pred CccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhhh
Q psy10463 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVLY 445 (605)
Q Consensus 366 ~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~~ 445 (605)
.|+++|+|+||+|+|+|++|.++|+||++|.+||+|++||+||+|+||++++++|||+|+|++|...||++|++. +++.
T Consensus 308 ~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHifRk~~pY~~p~~~-~~~~ 386 (578)
T KOG3736|consen 308 DPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIFRKRKPYTFPDGT-DTAT 386 (578)
T ss_pred CCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeeeecCCCccCCCcc-hhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998776 8899
Q ss_pred hhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCCcCCCCC-ccccccccccccc
Q psy10463 446 GNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHHFLPMDD-KFFGRIRHVQTHK 524 (605)
Q Consensus 446 rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~~~p~~~-~~~G~ir~~~~~~ 524 (605)
+|.+|+||+|||+||++||.++| ....+++||+++|++||++|+||+|+|||+||||+++.|... .++|+|+|..++.
T Consensus 387 ~N~~RlAeVWmDeyK~~~y~~~P-~~~~~d~GDvseR~~LR~~L~CKsFkWyL~nVyPel~~~~~~~~~~G~i~~~~~~~ 465 (578)
T KOG3736|consen 387 RNLKRLAEVWMDEYKEQFYKRMP-GLRNIDEGDLTERKALRERLNCKSFKWYLENVYPELYLPTPHVYASGEIRNGNPNL 465 (578)
T ss_pred hchhhhhhhhhHHHHHHHHhhCc-cccccCCCCchhHHHHHHhcCCccccchHhhcCccccCCCCcccccceeccCCcch
Confidence 99999999999999999999999 666699999999999999999999999999999999999765 7889999988999
Q ss_pred cccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCCCcceEeCC
Q psy10463 525 CVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQRWTYDK 604 (605)
Q Consensus 525 CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~~~ 604 (605)
|+|...... ..|.++++++| |++++||.|.|| +.++|+.+. .||++.. .|. |+|.+|+..++|.|.|+.
T Consensus 466 cld~~~~~~---~~~~~~~~~~C-h~~~~~Q~~~yT-~~~eir~~~-~cl~~~~----~~~-v~l~~C~~~~~q~w~~~~ 534 (578)
T KOG3736|consen 466 CLDTERAPA---GQGMAVGLYPC-HGPGGNQYFPYT-KQGEIRIGD-LCLDVDD----AGK-VTLYDCHKMGNQLWHYDK 534 (578)
T ss_pred hhhhhchhc---cCCCcceEecC-CCcccccccccc-CCcceEECC-EEecccc----CCc-eEEEecccccccceEEcC
Confidence 999976544 23689999999 899999999999 999999987 9999862 133 999999887799999875
|
|
| >KOG3738|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-91 Score=681.75 Aligned_cols=432 Identities=42% Similarity=0.787 Sum_probs=383.8
Q ss_pred cchHHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcce
Q psy10463 45 LSDAQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKE 124 (605)
Q Consensus 45 ~~~~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~E 124 (605)
....+..|+.|.||+..||.+...|.+||+|++.|....|. .++|.+||||.+|||+.+.|.+||.||++++|++++.|
T Consensus 80 ~~~Ged~y~~~~fnq~esd~l~~~r~i~dtRh~qC~~~~y~-~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~E 158 (559)
T KOG3738|consen 80 WHQGEDPYKANSFNQEESDKLNPTRKIPDTRHPQCRDVDYK-VDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHE 158 (559)
T ss_pred ccCCCchhhcCccchhhhhhhCCCCccccccccccccceee-cCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhhe
Confidence 44677899999999999999999999999999999999998 99999999999999997778777777777777666555
Q ss_pred EEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEE
Q psy10463 125 ILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVI 204 (605)
Q Consensus 125 iivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVII 204 (605)
||+|||+|.|.+
T Consensus 159 iILVDD~S~Dpe-------------------------------------------------------------------- 170 (559)
T KOG3738|consen 159 IILVDDFSQDPE-------------------------------------------------------------------- 170 (559)
T ss_pred eEEecCCCCChH--------------------------------------------------------------------
Confidence 555555555542
Q ss_pred EeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccC
Q psy10463 205 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEG 284 (605)
Q Consensus 205 p~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~g 284 (605)
.-. ...+.+ +++++++.++.|+.+.|+.|+..|.|
T Consensus 171 ----------------------------------------d~~----~L~ri~-kvr~LRN~~ReGLirSRvrGAdvA~a 205 (559)
T KOG3738|consen 171 ----------------------------------------DGK----LLKRIP-KVRVLRNNEREGLIRSRVRGADVAQA 205 (559)
T ss_pred ----------------------------------------HHH----HHhhhh-eeeeecccchhhhhhhhccccccccc
Confidence 221 123344 89999999999999999999999999
Q ss_pred CEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCC
Q psy10463 285 EILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDF 364 (605)
Q Consensus 285 d~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~ 364 (605)
.++.|||+||+++.+||++|+++++++...+|+|+||+|+.++|.|.++.....|||+|.++|+|.......... +.++
T Consensus 206 ~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLhF~We~~~~eqr~s-r~~P 284 (559)
T KOG3738|consen 206 TVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNFSYVGASADLRGGFDWSLHFKWEQMQLEQRES-RADP 284 (559)
T ss_pred eEEEEEecceeecchhhHHHHHHHhhcccceeecccccccccccccccchhhhcCCcceEEEEEehhcCHHHHhh-ccCC
Confidence 999999999999999999999999999999999999999999999999988889999999999999988776655 4889
Q ss_pred CCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhh
Q psy10463 365 TEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVL 444 (605)
Q Consensus 365 ~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~ 444 (605)
+.|+++|+++||+|+|+|++|.++|.||..|.+||||++|+++|+|+||+.++++|||+|+|+||+.+||+||++...++
T Consensus 285 t~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~gs~~ty 364 (559)
T KOG3738|consen 285 TAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNTY 364 (559)
T ss_pred CCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCCcCCCCC-cccccccccccc
Q psy10463 445 YGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHHFLPMDD-KFFGRIRHVQTH 523 (605)
Q Consensus 445 ~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~~~p~~~-~~~G~ir~~~~~ 523 (605)
.+|.+|.||+||||||.|||...| ..+.+.+|++..|.++|++++||||+|||+|||||+.+|... .+.|.||+ ..
T Consensus 365 ~~NTkr~AEvWmDEYK~~yyaarP-sAr~vpfg~i~~rL~~Rk~l~CksFkWYLenVyPeL~ip~~~~~~~g~lrq--g~ 441 (559)
T KOG3738|consen 365 IKNTKRAAEVWMDEYKNYYYAARP-SARRVPFGNIYDRLELRKKLRCKSFKWYLENVYPELRIPFKELIATGTLRQ--GD 441 (559)
T ss_pred hhcchHHHHHHHHHHHHHHHhcCc-hhhcCCCccHHHHHHHHhhcCCcchhhhhhhcCcceeccccccccccchhc--cc
Confidence 999999999999999999999999 788999999999999999999999999999999999999754 57899997 68
Q ss_pred ccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCC-CcceEe
Q psy10463 524 KCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTY 602 (605)
Q Consensus 524 ~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q~W~~ 602 (605)
.|||+.+... ...++|+.| |+.++||+|.+....+++..+..+||++.... .|++|.|..|.... .|+|.-
T Consensus 442 ~Cl~s~~~~~-----~~~~gl~~C-~~s~~nqqwa~~~t~~~~~~~~elCL~v~~~~--pg~~v~l~~C~~~e~~q~~v~ 513 (559)
T KOG3738|consen 442 NCLDSQGQNS-----QEALGLASC-HGSGGNQQWAFLRTSTQLITHRELCLAVGSNT--PGSPVALVPCGNNETKQRWVE 513 (559)
T ss_pred hhhhhhhccc-----ccCcceeec-ccCCCCcchhhhhhhhhHHHHHhhhheeecCC--CCCeEEEEecCCCCCceEEEe
Confidence 9999987654 236789999 88889999998322233333345999997643 48899999998877 899963
|
|
| >KOG3737|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-82 Score=616.93 Aligned_cols=432 Identities=39% Similarity=0.737 Sum_probs=387.5
Q ss_pred HHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEE
Q psy10463 48 AQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILL 127 (605)
Q Consensus 48 ~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~Eiiv 127 (605)
.+..-++.+||.++||.|+.+|.++|+|.++|+.-.|+ ..+|++||||.+|||.|+.|.+|++||+.++++.
T Consensus 114 ~~AsekEfGfN~~~SDmISm~R~v~D~R~EECkhWdYp-e~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~------- 185 (603)
T KOG3737|consen 114 IQASEKEFGFNMVASDMISMDRNVNDLRQEECKHWDYP-ENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRK------- 185 (603)
T ss_pred HHHHHHhhCcceeehhhhhcccCccccCHhhccccCCc-ccCCcceEEEEEecCccHHHHHHHHHHHhcCcHH-------
Confidence 35667899999999999999999999999999999999 9999999999999999888888877777776544
Q ss_pred EeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEee
Q psy10463 128 VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFH 207 (605)
Q Consensus 128 vdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~ 207 (605)
T Consensus 186 -------------------------------------------------------------------------------- 185 (603)
T KOG3737|consen 186 -------------------------------------------------------------------------------- 185 (603)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEE
Q psy10463 208 NEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEIL 287 (605)
Q Consensus 208 n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i 287 (605)
.+.|||+|||.|+.+.+++.|++|+..+.+.|++++++++.|++.||..|+++|+|++|
T Consensus 186 ---------------------~l~eivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~REGLI~aRSiGA~~atGeV~ 244 (603)
T KOG3737|consen 186 ---------------------YLAEIVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERREGLIQARSIGAQKATGEVL 244 (603)
T ss_pred ---------------------hhheEEEeccCCccHHHHHHHHHHHHHhcCEEEEEecchhhhhhhhhccchhhccccEE
Confidence 23588888888888888888999999998899999999999999999999999999999
Q ss_pred EEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEeccc----ccceeeeeccceeeEeecCchhHhhhccC
Q psy10463 288 VFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSF----ELHWGAFNWELHFRWYTYGSSDAIIKRKD 363 (605)
Q Consensus 288 ~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~----~~~~g~~~~~l~~~~~~~~~~~~~~~~~~ 363 (605)
+|||+||++..+||.+|++.+..+......|+||.||.++++|...+ +-.+|.|.|.+-++-.++..++... +.+
T Consensus 245 ifLDAHCEVntNWlpPLlAPI~rdRtvmTVP~IDgId~n~~EyrpvyG~dn~h~rGifeWgmLyKe~~~t~rE~r~-Rkh 323 (603)
T KOG3737|consen 245 IFLDAHCEVNTNWLPPLLAPISRDRTVMTVPLIDGIDGNTYEYRPVYGGDNDHARGIFEWGMLYKEVPLTPREKRL-RKH 323 (603)
T ss_pred EEEecceeeecccccccccccccCceEEEEeeeeeecCCceEEeeccCCcchhhcchhhhhheeccCCCCHHHHHh-hhc
Confidence 99999999999999999999999999999999999999999987643 2448999999999988888877655 667
Q ss_pred CCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCC----
Q psy10463 364 FTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGG---- 439 (605)
Q Consensus 364 ~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~---- 439 (605)
.+.|+++|+++||+|+|.|++|.++|.||+++.+||+|++||++++|+||++|+++|||+|+|+||..-||.+.+-
T Consensus 324 nsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSrVGHvYR~~mpy~fgk~~~k~ 403 (603)
T KOG3737|consen 324 NSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSRVGHVYRSLMPYQFGKPPIKV 403 (603)
T ss_pred cCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEccccchhhhccccccCCCCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999988332
Q ss_pred cchhhhhhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCC--cCC--CCCcccc
Q psy10463 440 VSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHH--FLP--MDDKFFG 515 (605)
Q Consensus 440 ~~~~~~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~--~~p--~~~~~~G 515 (605)
.+..+..|+.|+.+.|+|+||+|||.+.| ....+++||||++++||++|+||||+|||++|.-+. .+| +.+.-||
T Consensus 404 ~~p~i~iNy~RVvetW~Ddyk~YfytreP-~a~~l~~GDISeqlalr~~lnCkSFkWfMe~iAYDv~~~yP~lP~N~~WG 482 (603)
T KOG3737|consen 404 GSPPILINYVRVVETWWDDYKDYFYTREP-EAQALPYGDISEQLALREDLNCKSFKWFMEEIAYDVTSHYPLLPKNVDWG 482 (603)
T ss_pred CCCceEeehhhHHHHHHHhhhhheeecCh-hhccCCcccHHHHHHhHhhcCCchhHHHHHHHHHHHHhcCCCCCCCCcch
Confidence 13468899999999999999999999999 667899999999999999999999999999986553 222 3345799
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCC
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGF 595 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~ 595 (605)
+||+.+++.|||.++. ++|+.+++-+| |++++||+++++ ..|++.... .||+++ |.++.+..|.-+
T Consensus 483 E~R~~at~~ClDsMG~-----~p~g~mglt~C-Hg~GgNQL~RlN-~agQl~qge-~CltAd------g~~i~~~hC~lg 548 (603)
T KOG3737|consen 483 EIRGFATAYCLDSMGK-----TPGGFMGLTPC-HGMGGNQLFRLN-EAGQLMQGE-QCLTAD------GSKIMITHCNLG 548 (603)
T ss_pred hccCcccchhHHhcCC-----CCCCccccccc-cCCCCceEEEec-cccchhccc-eeeecC------CceEEEEEeecc
Confidence 9999999999999986 45899999999 999999999999 999998876 999865 468999999877
Q ss_pred C-CcceEeCC
Q psy10463 596 N-RQRWTYDK 604 (605)
Q Consensus 596 ~-~Q~W~~~~ 604 (605)
. +-.|+|++
T Consensus 549 tv~g~WqY~~ 558 (603)
T KOG3737|consen 549 TVKGEWQYFK 558 (603)
T ss_pred cccCceehhh
Confidence 7 77898865
|
|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-50 Score=410.01 Aligned_cols=298 Identities=54% Similarity=1.021 Sum_probs=256.7
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||+..+.|.+||+|+++++++...+|||||||||+|++.....+.+......++++++++.|.|+++|+|.|++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~ 80 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR 80 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence 79999999986799999999999998765579999999999997664433233333338999999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+|+||||+|||+|+++.|+||++|++.+.+++..+++|.+..++...+.+........+++.|.+.+.|........ .
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 158 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEER--R 158 (299)
T ss_pred HccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHh--h
Confidence 99999999999999999999999999999999999999998888888877665543477888888777765544432 1
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc-cCCCCCCCCC
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR-KASPYSFPGG 439 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r-~~~~~~~~~~ 439 (605)
......+.+++.++|+||+++|++|+++|||||.|..|++||+|||+|++++|+++.++|++.|.|.++ .+.++..+..
T Consensus 159 ~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~~~ 238 (299)
T cd02510 159 RESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGG 238 (299)
T ss_pred hcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCCCc
Confidence 233445677889999999999999999999999999988999999999999999999999999999999 7888876554
Q ss_pred cchhhhhhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCccccccccccc
Q psy10463 440 VSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVW 502 (605)
Q Consensus 440 ~~~~~~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~ 502 (605)
.. .+.+|..|++++|+++++.+++..+| ....+..|++.+|+++++++.||+|+||++.+.
T Consensus 239 ~~-~~~~n~~r~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 299 (299)
T cd02510 239 SG-TVLRNYKRVAEVWMDEYKEYFYKARP-ELRNIDYGDLSERKALRERLKCKSFKWYLENVY 299 (299)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHHHhcCc-ccccCCCCCHHHHHHHHHHcCCCCchHHHhhcC
Confidence 32 67899999999999999999999999 445589999999999999999999999998763
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. |
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=227.61 Aligned_cols=198 Identities=22% Similarity=0.241 Sum_probs=152.0
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 277 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~ 277 (605)
|++|||||+||+..+.+.+||+|+++|+++. +|||||||||+|+++...++.+..+.+ ++++++.+.+.|++.|+|.
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~a~n~ 77 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQDP-RIKVVFREENGGISAATNS 77 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhcCC-CEEEEEcccCCCHHHHHHH
Confidence 6799999999998778999999999999876 799999999999877777777777666 8999999999999999999
Q ss_pred HHhhccCCEEEEecCCcccCcChHHHHHHHHHc-CCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 278 GARQAEGEILVFLDAHCECTLGWLENLVARVAE-DRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 278 G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~-~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
|++.|+|+|++|+|+|+.+.|+||+.+++.+.. ....++.+.....+.....+.. ....+...
T Consensus 78 g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------------~~~~~~~~ 141 (202)
T cd04184 78 ALELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEP----------------FFKPDWSP 141 (202)
T ss_pred HHHhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEecc----------------ccCCCCCH
Confidence 999999999999999999999999999999944 4444443322111111000000 00000000
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEE
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~ 425 (605)
.. .......+++++++|+.|+++||||+.+. ++||+||++|++++|+++.++|.+.+.
T Consensus 142 -~~--------~~~~~~~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 142 -DL--------LLSQNYIGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred -HH--------hhhcCCccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhhhh
Confidence 00 01113445677899999999999999876 589999999999999999999986543
|
The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=223.62 Aligned_cols=174 Identities=20% Similarity=0.292 Sum_probs=145.2
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCCh---HH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGL---IK 273 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~---~~ 273 (605)
|.||||||+||++ ..|.++|+|+++|+++. +|||||||+|+|++. +.++++.+.++ .+++++....+.|. +.
T Consensus 1 p~vsviip~~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 76 (196)
T cd02520 1 PGVSILKPLCGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAI-PVVRKLIAKYPNVDARLLIGGEKVGINPKVN 76 (196)
T ss_pred CCeEEEEecCCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHH-HHHHHHHHHCCCCcEEEEecCCcCCCCHhHH
Confidence 6799999999999 89999999999999877 799999999999854 47888877776 24677877766664 34
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
++|.|++.|+|||++|+|+|+.++|+||+.+++.+..+..+++++.
T Consensus 77 ~~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~---------------------------------- 122 (196)
T cd02520 77 NLIKGYEEARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL---------------------------------- 122 (196)
T ss_pred HHHHHHHhCCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee----------------------------------
Confidence 6789999999999999999999999999999999865545554421
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
...|++++++|++|+++|||++.... .+||+||++|+.+.|+++.+.|.+.++|..
T Consensus 123 ------------------~~~g~~~~~r~~~~~~~ggf~~~~~~-~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~ 178 (196)
T cd02520 123 ------------------CAFGKSMALRREVLDAIGGFEAFADY-LAEDYFLGKLIWRLGYRVVLSPYVVMQPLG 178 (196)
T ss_pred ------------------cccCceeeeEHHHHHhccChHHHhHH-HHHHHHHHHHHHHcCCeEEEcchheeccCC
Confidence 24567899999999999999763333 479999999999999999999998766544
|
UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. |
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=236.87 Aligned_cols=219 Identities=21% Similarity=0.292 Sum_probs=165.6
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH-CCCCEEEEeCCCCCChHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK-LSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~-~~~~v~~i~~~~n~G~~~ar 275 (605)
+|.+++||++||+. +.+.+||.++.+|+++. .++++|||+|+|++.+ ..... .+ +++++.+.+|.|+++|.
T Consensus 2 ~~~i~~iiv~yn~~-~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~----~~~~~~~~-~v~~i~~~~NlG~agg~ 73 (305)
T COG1216 2 MPKISIIIVTYNRG-EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLE----ALKARFFP-NVRLIENGENLGFAGGF 73 (305)
T ss_pred CcceEEEEEecCCH-HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHH----HHHhhcCC-cEEEEEcCCCccchhhh
Confidence 68999999999999 99999999999999887 5777899999998543 22333 45 99999999999999999
Q ss_pred HHHHhhccCC---EEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEee
Q psy10463 276 LLGARQAEGE---ILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 276 N~G~~~A~gd---~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
|.|++.|.++ |+++||+|+.+.+++|+.|++.+++.+. .+++|.+...+........+ .....+...+..
T Consensus 74 n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~ 147 (305)
T COG1216 74 NRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRG------GESDGLTGGWRA 147 (305)
T ss_pred hHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheec------ccccccccccee
Confidence 9999999665 9999999999999999999999999866 66667765444332221111 011111111111
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
.+...... .........+.+.|++|+|+|++|+++|+|||.+++| +||+|+|+|+++.|+++.++|.+.+.|....+
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y-~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s 224 (305)
T COG1216 148 SPLLEIAP--DLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYHKIGSS 224 (305)
T ss_pred cccccccc--cccchhhhhhhcceeeeEEcHHHHHHhCCCCccccee-ehHHHHHHHHHHcCCeEEEeeccEEEEeccCC
Confidence 11111000 0000001111589999999999999999999999996 99999999999999999999999999988665
Q ss_pred C
Q psy10463 432 S 432 (605)
Q Consensus 432 ~ 432 (605)
.
T Consensus 225 ~ 225 (305)
T COG1216 225 K 225 (305)
T ss_pred C
Confidence 4
|
|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-26 Score=226.27 Aligned_cols=210 Identities=19% Similarity=0.195 Sum_probs=151.0
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC---CCCEEEEeCCCCCCh-HH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL---SVPTRVIRSPGRVGL-IK 273 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~---~~~v~~i~~~~n~G~-~~ 273 (605)
|+||||||+||++ +.|.++|+|+++|+++....||||||| |+|++.. .++++..++ ..+++++...++.|+ +.
T Consensus 1 p~vSViIp~yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~-~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~ 77 (232)
T cd06437 1 PMVTVQLPVFNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVR-LAREIVEEYAAQGVNIKHVRRADRTGYKAG 77 (232)
T ss_pred CceEEEEecCCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHH-HHHHHHHHHhhcCCceEEEECCCCCCCchH
Confidence 6799999999999 999999999999998765579999998 8887554 455544332 236888877777785 88
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCC-eeEEecccccceeeeeccceeeEeec
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDV-TFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~-~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
|+|.|++.|+|+||+|+|+|+.+.|+||+.+...+..+..+++++.+...+.. .+.. . ...+ ...+. ...
T Consensus 78 a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~-~-----~~~~--~~~~~-~~~ 148 (232)
T cd06437 78 ALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINANYSLLT-R-----VQAM--SLDYH-FTI 148 (232)
T ss_pred HHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCCCchhh-H-----hhhh--hHHhh-hhH
Confidence 99999999999999999999999999999988777655556776654333221 1100 0 0000 00000 000
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
. .... ........+.|+.+++||+.|+++||||+.+ ..||+||++|+++.|+++.+.|++.+.|..+
T Consensus 149 ~--~~~~-----~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~ 215 (232)
T cd06437 149 E--QVAR-----SSTGLFFNFNGTAGVWRKECIEDAGGWNHDT---LTEDLDLSYRAQLKGWKFVYLDDVVVPAELP 215 (232)
T ss_pred h--HhhH-----hhcCCeEEeccchhhhhHHHHHHhCCCCCCc---chhhHHHHHHHHHCCCeEEEeccceeeeeCC
Confidence 0 0000 0001112345667789999999999999875 3799999999999999999999999998763
|
Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we |
| >KOG3736|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-27 Score=249.03 Aligned_cols=376 Identities=24% Similarity=0.341 Sum_probs=232.5
Q ss_pred ceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceE
Q psy10463 123 KEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSI 202 (605)
Q Consensus 123 ~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSV 202 (605)
.|||+|||+|+.+.+...+++|++.+.. +++++.+++.|+.+||..|++.|+|++++|||++||+..+|+++.+
T Consensus 175 kEIiLVdD~S~~~~l~~~Ld~y~k~~~~-v~i~r~~~R~GLIrARl~GA~~A~geVL~FLDsHcE~n~gWLePLL----- 248 (578)
T KOG3736|consen 175 KEIILVDDFSDRDHLKDKLEEYVKRFSK-VRILRTKKREGLIRARLLGASMATGEVLTFLDSHCEVNVGWLEPLL----- 248 (578)
T ss_pred EEEEEeecCcchhhhhhhhHHHHhhhcc-eeEEeecchhhhHHHHhhhhhhhhchheeeeecceeEecCcchHHH-----
Confidence 5999999999999988889999999887 9999999999999999999999999999999999999999986433
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
..| .+........||-+-|..+... .... ...+.|+-...+
T Consensus 249 -------------~~I----~~~r~tvv~PvID~Id~~tf~y--------~~~~--------~~~rGgFdW~l~------ 289 (578)
T KOG3736|consen 249 -------------ARI----AEDRKTVVCPVIDVIDDNTFEY--------EKQS--------ELMRGGFDWELT------ 289 (578)
T ss_pred -------------HHh----hhcCceeecceEEeecCcCcee--------cccC--------ccceeeeeccee------
Confidence 221 1222222233443333333221 1100 011122211110
Q ss_pred cCCEEEEecCCcccCcChHHHHHHHHHcCC--cEEEeeeEeeecCCeeEEecccccc---eeeeeccceeeEeecCchhH
Q psy10463 283 EGEILVFLDAHCECTLGWLENLVARVAEDR--TRVVCPVIDIISDVTFAYVRSFELH---WGAFNWELHFRWYTYGSSDA 357 (605)
Q Consensus 283 ~gd~i~flD~D~~~~~~~L~~ll~~~~~~~--~~vv~p~i~~i~~~~~~~~~~~~~~---~g~~~~~l~~~~~~~~~~~~ 357 (605)
..= ..++..+....-.. ..| .....+-+..|+...|...++++.. ||+.+.+++|+.|.|++...
T Consensus 290 -------f~w-~~lP~~~~~~~~~~--t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~le 359 (578)
T KOG3736|consen 290 -------FKW-ERLPLPEEKRRELP--TDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLE 359 (578)
T ss_pred -------EEe-ccCCccHhhcccCC--CCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEE
Confidence 000 11223332221111 111 1222233457888888766655432 99999999999999999887
Q ss_pred hhhccCCCCccc--ccccc-ceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCC
Q psy10463 358 IIKRKDFTEPFK--TPAMA-GGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPY 434 (605)
Q Consensus 358 ~~~~~~~~~~~~--~~~~~-G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~ 434 (605)
..++......++ .|... ++...+.|.... -..+|..|--++.++.+ |.
T Consensus 360 i~PCSrVGHifRk~~pY~~p~~~~~~~~N~~R-------lAeVWmDeyK~~~y~~~----------------------P~ 410 (578)
T KOG3736|consen 360 IVPCSRVGHIFRKRKPYTFPDGTDTATRNLKR-------LAEVWMDEYKEQFYKRM----------------------PG 410 (578)
T ss_pred ecCccceeeeeecCCCccCCCcchhhhhchhh-------hhhhhhHHHHHHHHhhC----------------------cc
Confidence 776655554443 22222 222333443332 13566555555554432 11
Q ss_pred CCCCCcchhhhhhHHHHHHHHhhhhHhhhhccCchhhccC----CccchHHHHHHhhhcCCccccc------ccccccCC
Q psy10463 435 SFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQR----DKQAVRSRLELRKQLKCHSFKW------YLTHVWPH 504 (605)
Q Consensus 435 ~~~~~~~~~~~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~----~~g~~~~r~~lr~~l~ck~f~w------yl~~v~p~ 504 (605)
......++...|-..|-. .=++.|+||+.+++|+..... ..|.+.. ...-.|.+-.- .---+|||
T Consensus 411 ~~~~d~GDvseR~~LR~~-L~CKsFkWyL~nVyPel~~~~~~~~~~G~i~~----~~~~~cld~~~~~~~~~~~~~~~~C 485 (578)
T KOG3736|consen 411 LRNIDEGDLTERKALRER-LNCKSFKWYLENVYPELYLPTPHVYASGEIRN----GNPNLCLDTERAPAGQGMAVGLYPC 485 (578)
T ss_pred ccccCCCCchhHHHHHHh-cCCccccchHhhcCccccCCCCcccccceecc----CCcchhhhhhchhccCCCcceEecC
Confidence 112233344444444432 237889999999999754322 2344433 11222322221 23447899
Q ss_pred CcCCCCCc----cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCC
Q psy10463 505 HFLPMDDK----FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEY 579 (605)
Q Consensus 505 ~~~p~~~~----~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~ 579 (605)
|....++. ..|+|+.. ..|||+. .. |+ |.|.+| |..+ ||.|.|. ..|.|.+ .+++||++...
T Consensus 486 h~~~~~Q~~~yT~~~eir~~--~~cl~~~--~~-----~~-v~l~~C-~~~~-~q~w~~~-~~~~i~~~~sg~CL~~~~~ 552 (578)
T KOG3736|consen 486 HGPGGNQYFPYTKQGEIRIG--DLCLDVD--DA-----GK-VTLYDC-HKMG-NQLWHYD-KDGTLYHRNSGKCLEAAVD 552 (578)
T ss_pred CCccccccccccCCcceEEC--CEEeccc--cC-----Cc-eEEEec-cccc-ccceEEc-CCCceEcCCCCccccccCC
Confidence 98876553 45899884 5999985 11 23 999999 6655 9999999 5588875 57899999875
Q ss_pred CCCCCCceEEEeCCCCC-CcceEeCC
Q psy10463 580 ENDISPRVRILACSGFN-RQRWTYDK 604 (605)
Q Consensus 580 ~~~~g~~v~l~~C~~~~-~Q~W~~~~ 604 (605)
.. .+.+..|+.++ .|+|.+..
T Consensus 553 ~~----~~~l~~c~~~~~~Q~W~~~~ 574 (578)
T KOG3736|consen 553 KN----GLILVACDPSDPTQQWLFEH 574 (578)
T ss_pred CC----CceEeecCCCCCcceEEEEe
Confidence 43 29999999988 99999853
|
|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=221.89 Aligned_cols=206 Identities=19% Similarity=0.150 Sum_probs=151.4
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh-HHHHHHHH
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL-IKARLLGA 279 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~-~~arN~G~ 279 (605)
|||||+||++...|.++|+|+.+|+++. +|||||||+|+|++..+.++++.++.+.+++++....+.|. ++|+|.|+
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~ 78 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYAL 78 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHH
Confidence 7999999997358999999999999876 79999999999997766777777776657889988888886 89999999
Q ss_pred hhcc--CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhH
Q psy10463 280 RQAE--GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDA 357 (605)
Q Consensus 280 ~~A~--gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 357 (605)
+.|. +|||+|+|+|+.++|+||+.++..+++...+++++.....+..... . .....|. + ....
T Consensus 79 ~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~------~-~~~~~~~----~----~~~~ 143 (236)
T cd06435 79 ERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGEESL------F-KRMCYAE----Y----KGFF 143 (236)
T ss_pred HhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCCccH------H-HHHHhHH----H----HHHH
Confidence 9986 6999999999999999999999999755556665432221111000 0 0000000 0 0000
Q ss_pred hhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 358 IIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 358 ~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
..... ...........|+++++||++|+++||||+.+ ..||+||++|+++.|+++.+.|.+.++|.
T Consensus 144 ~~~~~-~~~~~~~~~~~g~~~~~rr~~~~~iGgf~~~~---~~eD~dl~~r~~~~G~~~~~~~~~~~~~~ 209 (236)
T cd06435 144 DIGMV-SRNERNAIIQHGTMCLIRRSALDDVGGWDEWC---ITEDSELGLRMHEAGYIGVYVAQSYGHGL 209 (236)
T ss_pred HHHhc-cccccCceEEecceEEEEHHHHHHhCCCCCcc---ccchHHHHHHHHHCCcEEEEcchhhccCc
Confidence 00000 00111123456788999999999999999976 37999999999999999999999877553
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. |
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=217.24 Aligned_cols=198 Identities=15% Similarity=0.137 Sum_probs=150.9
Q ss_pred eEEEEeechh-hHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 201 SIVIVFHNEA-WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 201 SVIIp~~n~~-~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
|||||+||++ ...|.+||.|+++|+++. .|||||||||+++.+.++++++.++.+ +++++.+.|.|++.|+|.|+
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~~~--i~~i~~~~n~G~~~a~N~g~ 76 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRKLP--LKVVPLEKNRGLGKALNEGL 76 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhcCC--eEEEEcCccccHHHHHHHHH
Confidence 7999999987 248999999999999875 699999999966667778888877665 99999999999999999999
Q ss_pred hhccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 280 RQAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
+.|+|+||+|+|+|+.+.|++|+.+++.+.+++ ..++++....++.+........ .........
T Consensus 77 ~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 141 (201)
T cd04195 77 KHCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR---------------LPTSHDDIL 141 (201)
T ss_pred HhcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc---------------CCCCHHHHH
Confidence 999999999999999999999999999997764 4566655544333221111000 000011100
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEE
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAH 426 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H 426 (605)
. ...... .+.+++++++|++|+++|+|++. . ++||++|++|+.++|+++.++|.+.+.+
T Consensus 142 ~-~~~~~~-----~~~~~~~~~rr~~~~~~g~~~~~-~--~~eD~~~~~r~~~~g~~~~~~~~~~~~y 200 (201)
T cd04195 142 K-FARRRS-----PFNHPTVMFRKSKVLAVGGYQDL-P--LVEDYALWARMLANGARFANLPEILVKA 200 (201)
T ss_pred H-HhccCC-----CCCChHHhhhHHHHHHcCCcCCC-C--CchHHHHHHHHHHcCCceecccHHHhhc
Confidence 0 000111 23445678999999999999987 2 5899999999999999999999887654
|
AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=223.32 Aligned_cols=207 Identities=15% Similarity=0.100 Sum_probs=145.8
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 277 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~ 277 (605)
|.+|||||+||++ ..|.++|+|+++|+++...+|||||||+|+|++.. .++++......++.++....+.|.+.|+|.
T Consensus 1 p~vsIiIp~~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~-i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~ 78 (241)
T cd06427 1 PVYTILVPLYKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIA-AARALRLPSIFRVVVVPPSQPRTKPKACNY 78 (241)
T ss_pred CeEEEEEecCCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHH-HHHHhccCCCeeEEEecCCCCCchHHHHHH
Confidence 7899999999999 99999999999999875558999999999998544 566654321225666667778899999999
Q ss_pred HHhhccCCEEEEecCCcccCcChHHHHHHHHHcC-Cc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 278 GARQAEGEILVFLDAHCECTLGWLENLVARVAED-RT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 278 G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~-~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
|+++|+||||+|+|+|+.++|+||+++++.+.++ .. .++++.+...+.... . . ...+ .+.+. .....
T Consensus 79 g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~-~-~~~~--~~~~~--~~~~~ 147 (241)
T cd06427 79 ALAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNAREN-----W-L-TRMF--ALEYA--AWFDY 147 (241)
T ss_pred HHHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCcc-----H-H-HHHH--HHHHH--HHHHH
Confidence 9999999999999999999999999999999764 33 454544322211100 0 0 0000 00000 00000
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEE
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHV 424 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v 424 (605)
.... ...... ...+.|++++++|++|+++||||+.. ..||.||++|+++.|+++.++|...+
T Consensus 148 ~~~~-~~~~~~---~~~~~g~~~~~rr~~~~~vgg~~~~~---~~eD~~l~~rl~~~G~r~~~~~~~~~ 209 (241)
T cd06427 148 LLPG-LARLGL---PIPLGGTSNHFRTDVLRELGGWDPFN---VTEDADLGLRLARAGYRTGVLNSTTL 209 (241)
T ss_pred HHHH-HHhcCC---eeecCCchHHhhHHHHHHcCCCCccc---chhhHHHHHHHHHCCceEEEeccccc
Confidence 0000 000011 11346778899999999999999843 37999999999999999999987543
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot |
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-25 Score=207.78 Aligned_cols=180 Identities=22% Similarity=0.361 Sum_probs=141.6
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEE-EeCCCCCChHHHHHHHHh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRV-IRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~-i~~~~n~G~~~arN~G~~ 280 (605)
||||+||+. ..|.++|.|+.+|+++. .|||||||+|+|++ .+.++++.+..+.++.. ++.+.+.|.+.++|.|++
T Consensus 1 ivip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~ 76 (182)
T cd06420 1 LIITTYNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEET-KELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIA 76 (182)
T ss_pred CEEeecCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhH-HHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHH
Confidence 699999999 99999999999999765 79999999999974 45677776654434444 444445678899999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
.|+|+||+|||+|+.+.++||+.+++.+ .....++++.+. .+...
T Consensus 77 ~a~g~~i~~lD~D~~~~~~~l~~~~~~~-~~~~~v~g~~~~-~~~~~--------------------------------- 121 (182)
T cd06420 77 AAKGDYLIFIDGDCIPHPDFIADHIELA-EPGVFLSGSRVL-LNEKL--------------------------------- 121 (182)
T ss_pred HhcCCEEEEEcCCcccCHHHHHHHHHHh-CCCcEEecceee-ccccc---------------------------------
Confidence 9999999999999999999999999988 333344443321 00000
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCe-EEEecceEEEEEc
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGS-IEIAPCSHVAHLF 428 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~-i~~~p~s~v~H~~ 428 (605)
......|++++++|+.|.++||||+.+..|++||+||++|++++|++ ..+.|.+.++|.+
T Consensus 122 --------~~~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~~ 182 (182)
T cd06420 122 --------TERGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHLW 182 (182)
T ss_pred --------ceeEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeecC
Confidence 00245577889999999999999999999999999999999999955 4555688888864
|
Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm |
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-25 Score=222.18 Aligned_cols=214 Identities=26% Similarity=0.392 Sum_probs=150.3
Q ss_pred eEEEEeechhh-----HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC---CChH
Q psy10463 201 SIVIVFHNEAW-----SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR---VGLI 272 (605)
Q Consensus 201 SVIIp~~n~~~-----~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n---~G~~ 272 (605)
|||||++++.. +.+..||.++..+..+. ..||||||++|++.. .+.+.++.+... .++++..+.. .|.+
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~-~~eiIvvd~~s~~~~-~~~l~~~~~~~~-~~~~i~~~~~~~~f~~a 77 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDP-DFEIIVVDDGSSDEF-DEELKKLCEKNG-FIRYIRHEDNGEPFSRA 77 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCchhH-HHHHHHHHhccC-ceEEEEcCCCCCCcCHH
Confidence 79999999982 24555667776644332 389999999999874 335666666655 4446666544 5999
Q ss_pred HHHHHHHhhccCCEEEEecCCcccCcChHHHHHH---HHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceee
Q psy10463 273 KARLLGARQAEGEILVFLDAHCECTLGWLENLVA---RVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFR 348 (605)
Q Consensus 273 ~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~---~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~ 348 (605)
.|||.|++.|++|+|+|+|+|+.++|++++.++. .+..++ ..++.|....-...+.... ....
T Consensus 78 ~arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~-------~~~~------ 144 (281)
T PF10111_consen 78 KARNIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFY-------SQFK------ 144 (281)
T ss_pred HHHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHh-------hcch------
Confidence 9999999999999999999999999999999999 676665 4555565422111111100 0000
Q ss_pred EeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 349 WYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
..................+....+.|+|++++|+.|.++|||||.|.+||+||.||+.|+.+.|..+...|...++|..
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~ 223 (281)
T PF10111_consen 145 -NLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSH 223 (281)
T ss_pred -hcchHHHHHHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhccccc
Confidence 0000010100011111222234567799999999999999999999999999999999999999999999999998876
Q ss_pred ccC
Q psy10463 429 RKA 431 (605)
Q Consensus 429 r~~ 431 (605)
...
T Consensus 224 ~~~ 226 (281)
T PF10111_consen 224 RWP 226 (281)
T ss_pred CCC
Confidence 443
|
|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-25 Score=218.40 Aligned_cols=210 Identities=17% Similarity=0.140 Sum_probs=151.9
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh-HHHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL-IKARL 276 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~-~~arN 276 (605)
|+||||||+||++...+.++|+|+++|+++...+|||||||+|+|+ +.+.++++..+. +++++..+.+.|. ++++|
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~-t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~n 77 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPE-LRALAAELGVEY--GYRYLTRPDNRHAKAGNLN 77 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchh-HHHHHHHhhccc--CceEEEeCCCCCCcHHHHH
Confidence 6899999999986367899999999999877557999999999987 455677765543 4677777766664 67789
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
.|++.|+||||+|+|+|+.++|+||+.+++.+.+++ .+++++.....+...... . ...+.+. ..
T Consensus 78 ~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~-~~~~~~~---------~~ 142 (234)
T cd06421 78 NALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDW-----L-ADGAPNE---------QE 142 (234)
T ss_pred HHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchh-----H-HHHHHHH---------HH
Confidence 999999999999999999999999999999998844 455554432222211100 0 0000000 00
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
...................|+++++||++|+++|||++.+. +||++|++|+++.|+++.++|.+.++|..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~---~eD~~l~~r~~~~g~~i~~~~~~~~~~~~ 212 (234)
T cd06421 143 LFYGVIQPGRDRWGAAFCCGSGAVVRREALDEIGGFPTDSV---TEDLATSLRLHAKGWRSVYVPEPLAAGLA 212 (234)
T ss_pred HHHHHHHHHHhhcCCceecCceeeEeHHHHHHhCCCCccce---eccHHHHHHHHHcCceEEEecCccccccC
Confidence 00000000001122445678899999999999999997653 79999999999999999999999887654
|
Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. |
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=235.08 Aligned_cols=210 Identities=19% Similarity=0.223 Sum_probs=160.3
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~a 274 (605)
...|.+|||||+|||+ +.+.++++|+++|+++. +|||||||||+|++ .+.++++.++++ ++++++.++|.|.+.|
T Consensus 51 ~~~p~vsViIp~yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t-~~~l~~~~~~~~-~v~~i~~~~n~Gka~a 125 (420)
T PRK11204 51 KEYPGVSILVPCYNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNT-GEILDRLAAQIP-RLRVIHLAENQGKANA 125 (420)
T ss_pred CCCCCEEEEEecCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccH-HHHHHHHHHhCC-cEEEEEcCCCCCHHHH
Confidence 3478999999999999 99999999999999886 79999999999984 557788888777 8999998999999999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
+|.|++.|+|||++++|+|+.++|++|+.+++.+++++. +++++.....+..++. +. ...+.+. ...
T Consensus 126 ln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~~~~--~~--~~~~~~~--------~~~ 193 (420)
T PRK11204 126 LNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRSTLL--GR--IQVGEFS--------SII 193 (420)
T ss_pred HHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccchhHH--HH--HHHHHHH--------Hhh
Confidence 999999999999999999999999999999999976654 5554332221111100 00 0000000 000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
.. ... .... .-....++|+++++||+.++++||||+.+. .||.|+++|+.++|+++.+.|++.++|..
T Consensus 194 ~~-~~~-~~~~--~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~~~~~~~~ 261 (420)
T PRK11204 194 GL-IKR-AQRV--YGRVFTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPRALCWILM 261 (420)
T ss_pred hH-HHH-HHHH--hCCceEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccccEEEeEC
Confidence 00 000 0000 011234678899999999999999999874 79999999999999999999999998875
|
|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-25 Score=213.94 Aligned_cols=206 Identities=18% Similarity=0.228 Sum_probs=149.2
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC-CEEEEe----CCCCCChHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIR----SPGRVGLIKARL 276 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~-~v~~i~----~~~n~G~~~arN 276 (605)
||||+||++ +.|.+||.|+++|+++. .+|||||||||+|++ .+.++++.++++. +++++. .+.+.|++.|+|
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N 77 (219)
T cd06913 1 IILPVHNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKS-AEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKN 77 (219)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccH-HHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHH
Confidence 699999999 99999999999999763 279999999999985 4578888776542 567664 345689999999
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
.|++.|+||||+|||+|+.+.|+||+.++..+.+++..++++.+......... . .. .|. .......
T Consensus 78 ~g~~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~----~~--~~~-----~~~~~~~ 143 (219)
T cd06913 78 QAIAQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPNSIIGCQVRRIPEDSTE---R----YT--RWI-----NTLTREQ 143 (219)
T ss_pred HHHHhcCCCEEEEECCCccCChhHHHHHHHHHHhCCCcEEEEEEEecCcccch---h----hH--HHH-----HhcCHHH
Confidence 99999999999999999999999999999998887776666554322221110 0 00 000 0001000
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
......... .+.+....++++|++|+++||||+.+.. .+||++|++|+.+.|+++.++|.+.+.+..+
T Consensus 144 ~~~~~~~~~----~~~~~~~~~~~rr~~~~~~g~f~~~~~~-~~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~ 211 (219)
T cd06913 144 LLTQVYTSH----GPTVIMPTWFCSREWFSHVGPFDEGGKG-VPEDLLFFYEHLRKGGGVYRVDRCLLLYRYH 211 (219)
T ss_pred HHHHHHhhc----CCccccccceeehhHHhhcCCccchhcc-chhHHHHHHHHHHcCCceEEEcceeeeeeec
Confidence 000000000 1122223467999999999999998654 3799999999999999999999988876553
|
This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified. |
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=208.63 Aligned_cols=174 Identities=22% Similarity=0.259 Sum_probs=146.3
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||++ +.|.++|.|+++|+++. .|||||||||+|++ .+.++++.... +++++..++|.|.+.++|.|++.
T Consensus 1 viI~~~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t-~~~~~~~~~~~--~i~~~~~~~n~g~~~~~n~~~~~ 74 (202)
T cd04185 1 AVVVTYNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGT-AEWLTSLGDLD--NIVYLRLPENLGGAGGFYEGVRR 74 (202)
T ss_pred CEEEeeCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcch-HHHHHHhcCCC--ceEEEECccccchhhHHHHHHHH
Confidence 699999999 99999999999999875 69999999999974 44666654433 38999999999999999999887
Q ss_pred c---cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 282 A---EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 282 A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
| ++|+++|+|+|+.++++||+.+++.+.+....+++|.+...+.
T Consensus 75 a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~--------------------------------- 121 (202)
T cd04185 75 AYELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG--------------------------------- 121 (202)
T ss_pred HhccCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC---------------------------------
Confidence 6 7999999999999999999999999985555666554311000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
.+++++++|+.|+++|+||+.+..| +||.||+.|+++.|+++ +.|.+.++|....+
T Consensus 122 ---------------~~~~~~~~~~~~~~~g~~~~~~~~~-~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~ 177 (202)
T cd04185 122 ---------------SFVGVLISRRVVEKIGLPDKEFFIW-GDDTEYTLRASKAGPGI-YVPDAVVVHKTAIN 177 (202)
T ss_pred ---------------ceEEEEEeHHHHHHhCCCChhhhcc-chHHHHHHHHHHcCCcE-EecceEEEEccccc
Confidence 2345789999999999999998875 79999999999999999 99999999987554
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-25 Score=215.66 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=132.4
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC-CEEEEeCCCCCC---hHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVG---LIK 273 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~-~v~~i~~~~n~G---~~~ 273 (605)
|.||||||+||+. +.+.++|.|+++|+++. .||+||||+|++++ .+.++++.+.++. +++++..+.+.| .+.
T Consensus 1 P~v~Vvip~~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~-~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~ 76 (228)
T PF13641_consen 1 PRVSVVIPAYNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDET-AEILRALAARYPRVRVRVIRRPRNPGPGGKAR 76 (228)
T ss_dssp --EEEE--BSS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-G-CTTHHHHHHTTGG-GEEEEE----HHHHHHHH
T ss_pred CEEEEEEEecCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHH-HHHHHHHHHHcCCCceEEeecCCCCCcchHHH
Confidence 7799999999999 89999999999998755 89999999998874 4467788787773 578998877666 678
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
|+|.|++++++|+|+|+|+|+.++|+||+.+++.+.....+++++.+...+...+ ..... . +.+.....
T Consensus 77 a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~-------~--~~~~~~~~- 145 (228)
T PF13641_consen 77 ALNEALAAARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNW-LTRLQ-------D--LFFARWHL- 145 (228)
T ss_dssp HHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCE-EEE-T-------T----S-EETT-
T ss_pred HHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCH-HHHHH-------H--HHHhhhhh-
Confidence 8999999999999999999999999999999999966666766666533222211 00000 0 00000000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
. ............+.|++++++|++|+++||||+ +. .+||++|++|+++.|+++.+.|.+.+.|..+
T Consensus 146 -~-----~~~~~~~~~~~~~~G~~~~~rr~~~~~~g~fd~-~~--~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~ 212 (228)
T PF13641_consen 146 -R-----FRSGRRALGVAFLSGSGMLFRRSALEEVGGFDP-FI--LGEDFDLCLRLRAAGWRIVYAPDALVYHEEP 212 (228)
T ss_dssp -T-----S-TT-B----S-B--TEEEEEHHHHHHH-S--S-SS--SSHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred -h-----hhhhhcccceeeccCcEEEEEHHHHHHhCCCCC-CC--cccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence 0 001112223455678999999999999999999 32 4699999999999999999999999999863
|
|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=213.74 Aligned_cols=210 Identities=24% Similarity=0.275 Sum_probs=155.5
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
++|||||+||++ +.+.++|.|+.+|+++...+|||||||+|+|++ .+.++.+..+.+ .++++..+ +.|.+.|+|.|
T Consensus 1 ~~sIiip~~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~-~~~~~~~~~~~~-~v~~i~~~-~~~~~~a~N~g 76 (249)
T cd02525 1 FVSIIIPVRNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGT-REIVQEYAAKDP-RIRLIDNP-KRIQSAGLNIG 76 (249)
T ss_pred CEEEEEEcCCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccH-HHHHHHHHhcCC-eEEEEeCC-CCCchHHHHHH
Confidence 479999999999 999999999999987644489999999999974 557777777665 79999866 46899999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
++.|++|||+|||+|+.+.|+||+++++.+.+.+..++++.........+.. .+.+..... .........
T Consensus 77 ~~~a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~ 146 (249)
T cd02525 77 IRNSRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQK---------AIAVAQSSP-LGSGGSAYR 146 (249)
T ss_pred HHHhCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHH---------HHHHHhhch-hccCCcccc
Confidence 9999999999999999999999999999888776655554442222221100 000000000 000000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
..... ......|++++++|++|.++|+||+.+. .+||.||++|++++|+++.++|.+.+.|..+
T Consensus 147 ---~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~ 210 (249)
T cd02525 147 ---GGAVK--IGYVDTVHHGAYRREVFEKVGGFDESLV--RNEDAELNYRLRKAGYKIWLSPDIRVYYYPR 210 (249)
T ss_pred ---ccccc--cccccccccceEEHHHHHHhCCCCcccC--ccchhHHHHHHHHcCcEEEEcCCeEEEEcCC
Confidence 00000 0224567788999999999999999876 4799999999999999999999999998763
|
Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. |
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=230.83 Aligned_cols=209 Identities=21% Similarity=0.224 Sum_probs=159.4
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
..|.||||||+|||+ ..+.++|+|+++|+++. +|||||||||+|++ .+.++++.++++ ++++++.+.|.|.+.|+
T Consensus 73 ~~p~vsViIP~yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t-~~~~~~~~~~~~-~v~vv~~~~n~Gka~Al 147 (444)
T PRK14583 73 GHPLVSILVPCFNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDT-AQVLDALLAEDP-RLRVIHLAHNQGKAIAL 147 (444)
T ss_pred CCCcEEEEEEeCCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccH-HHHHHHHHHhCC-CEEEEEeCCCCCHHHHH
Confidence 468999999999999 89999999999999886 79999999999984 557788878777 89999989999999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCc
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
|.|++.|+|||++++|+|+.++|++|+.+++.+.+++. +++++.....+.+++. .. ...+.+. ..+ .
T Consensus 148 N~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~--~~--~~~~e~~--~~~---~--- 215 (444)
T PRK14583 148 RMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLI--GR--VQVGEFS--SII---G--- 215 (444)
T ss_pred HHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcch--hh--HHHHHHH--HHH---H---
Confidence 99999999999999999999999999999999876654 5554332222221110 00 0000000 000 0
Q ss_pred hhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 355 SDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
......... -.....+|+++++||++++++||||+++. .||.|+++|+.++|+++.+.|++.+++..
T Consensus 216 -~~~~~~~~~---g~~~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p~a~~~~~~ 282 (444)
T PRK14583 216 -LIKRTQRVY---GQVFTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEPRGLCWILM 282 (444)
T ss_pred -HHHHHHHHh---CCceEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEeeccEEeeeC
Confidence 000000000 01235678899999999999999999874 79999999999999999999999888764
|
|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=231.46 Aligned_cols=218 Identities=17% Similarity=0.230 Sum_probs=159.1
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
..|.+|||||+||++ +.+.++|+|+.+|+++....|||||||||+|++ .+.++++.+.++ +++++..+.+.|.++|+
T Consensus 47 ~~P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T-~~il~~~~~~~~-~v~v~~~~~~~Gka~Al 123 (439)
T TIGR03111 47 KLPDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDS-FQVFCRAQNEFP-GLSLRYMNSDQGKAKAL 123 (439)
T ss_pred CCCCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhH-HHHHHHHHHhCC-CeEEEEeCCCCCHHHHH
Confidence 479999999999999 999999999999998876679999999999985 447777777777 78887777889999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccce-eeEeecC
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELH-FRWYTYG 353 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~ 353 (605)
|.|++.++||||+++|+|+.++|++|+.+++.+.+++. .++++.+.. +.+..... .+.+.+.+. ..+....
T Consensus 124 N~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~-~~~~~~~~------~~~~~~~~~~~~~~~y~ 196 (439)
T TIGR03111 124 NAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILT-DKELIEKT------KGRFLKLIRRCEYFEYA 196 (439)
T ss_pred HHHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEec-Cchhhhhh------cchhhhHhHHhHHHHHH
Confidence 99999999999999999999999999999999987664 555554421 11111000 000000000 0000000
Q ss_pred chhHhhhccCCCCcc-ccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHH-cCCeEEEecceEEEEEc
Q psy10463 354 SSDAIIKRKDFTEPF-KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQ-CGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~-~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~-~G~~i~~~p~s~v~H~~ 428 (605)
...... . ...... ....++|+++++||++++++||||+... +||.|+++|+++ .|+++.+.|.+.++|..
T Consensus 197 ~~~l~~-r-~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~ 268 (439)
T TIGR03111 197 QAFLAG-R-NFESQVNSLFTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCENAIFYVDP 268 (439)
T ss_pred HHHHhh-h-HHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence 000000 0 000001 1234678888999999999999998763 799999999975 69999999999998865
|
Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602). |
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-24 Score=215.87 Aligned_cols=198 Identities=18% Similarity=0.171 Sum_probs=144.5
Q ss_pred EeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChH-HHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-
Q psy10463 205 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTRE-FLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA- 282 (605)
Q Consensus 205 p~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~-~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A- 282 (605)
+|||++.+.|.++|.|+++|+ .|||||||+|+++ ++ +++.+..+ ++++++.++|.|+++|+|.|++.|
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~~~~----~~~~~~~~-~i~~i~~~~N~G~a~a~N~Gi~~a~ 70 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV-----DRIIAVDNSPHSDQPL----KNARLRGQ-KIALIHLGDNQGIAGAQNQGLDASF 70 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC-----CEEEEEECcCCCcHhH----HHHhccCC-CeEEEECCCCcchHHHHHHHHHHHH
Confidence 478974489999999999985 4999999998754 33 33344455 899999999999999999999998
Q ss_pred --cCCEEEEecCCcccCcChHHHHHHHHHcC--CcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 283 --EGEILVFLDAHCECTLGWLENLVARVAED--RTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 283 --~gd~i~flD~D~~~~~~~L~~ll~~~~~~--~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
.+|||+|||+|+.+++++|+.+++.++++ ..++++|.+. +...-...+.... .+ +.+....
T Consensus 71 ~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~-------~~~~~~~----- 135 (281)
T TIGR01556 71 RRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFF--DRGTSRRLPAIHL-DG-------LLLRQIS----- 135 (281)
T ss_pred HCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEE--cCCCcccCCceee-cc-------cceeeec-----
Confidence 78999999999999999999999999876 4577777652 2211000000000 00 0000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEccc
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRK 430 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~ 430 (605)
......+.....+.++.++++|++|+++|+|||.++++ +||+|+|+|+++.|+++.++|.+.+.|....
T Consensus 136 --~~~~~~~~~~~~~~~sg~li~~~~~~~iG~fde~~fi~-~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~ 204 (281)
T TIGR01556 136 --LDGLTTPQKTSFLISSGCLITREVYQRLGMMDEELFID-HVDTEWSLRAQNYGIPLYIDPDIVLEHRIGD 204 (281)
T ss_pred --ccccCCceeccEEEcCcceeeHHHHHHhCCccHhhccc-chHHHHHHHHHHCCCEEEEeCCEEEEEecCC
Confidence 00011122233333344579999999999999999985 7999999999999999999999999998654
|
Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids. |
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=208.60 Aligned_cols=201 Identities=16% Similarity=0.164 Sum_probs=146.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
+|||+||+..+.|.+||+|+++| . .|||||||+|++.+ .... ++ ..+ ++++++.+.|.|++.|+|.|++.
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q---~--~~iivvDn~s~~~~-~~~~-~~--~~~-~i~~i~~~~n~G~~~a~N~g~~~ 70 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ---V--DKVVVVDNSSGNDI-ELRL-RL--NSE-KIELIHLGENLGIAKALNIGIKA 70 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc---C--CEEEEEeCCCCccH-HHHh-hc--cCC-cEEEEECCCceehHHhhhHHHHH
Confidence 58999999878999999999998 2 69999999998763 2222 11 233 79999999999999999999999
Q ss_pred ccC---CEEEEecCCcccCcChHHHHH---HHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCc
Q psy10463 282 AEG---EILVFLDAHCECTLGWLENLV---ARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 282 A~g---d~i~flD~D~~~~~~~L~~ll---~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
|+| |||+|+|+|+.++|+||+.++ ..+.+++. .+++|.+...+....... .....+.. ...
T Consensus 71 a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~----~~~-- 138 (237)
T cd02526 71 ALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPG------VRKSGYKL----RIQ-- 138 (237)
T ss_pred HHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccc------eeccCccc----eec--
Confidence 988 999999999999999999995 44544443 566665432222211100 00000000 000
Q ss_pred hhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 355 SDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
..............+++++++|++|+++||||+.+.. ++||+||++|++++|+++.++|.+.+.|.....
T Consensus 139 ------~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~-~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~ 208 (237)
T cd02526 139 ------KEGEEGLKEVDFLITSGSLISLEALEKVGGFDEDLFI-DYVDTEWCLRARSKGYKIYVVPDAVLKHELGDK 208 (237)
T ss_pred ------ccccCCceEeeeeeccceEEcHHHHHHhCCCCHHHcC-ccchHHHHHHHHHcCCcEEEEcCeEEEecccCc
Confidence 0001111223445567789999999999999999875 589999999999999999999999999976443
|
Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen. |
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=228.62 Aligned_cols=213 Identities=21% Similarity=0.224 Sum_probs=152.7
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC--CCEEEEeCCC----C
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS--VPTRVIRSPG----R 268 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~--~~v~~i~~~~----n 268 (605)
+..|+||||||+||++ +.|.+||+|+++|+++.. +|||||||+|+|++ .+.++++.++++ .++++++.+. .
T Consensus 37 ~~~p~VSVIIpa~Ne~-~~L~~~L~sL~~q~yp~~-~eIIVVDd~StD~T-~~i~~~~~~~~~~~~~i~vi~~~~~~~g~ 113 (384)
T TIGR03469 37 EAWPAVVAVVPARNEA-DVIGECVTSLLEQDYPGK-LHVILVDDHSTDGT-ADIARAAARAYGRGDRLTVVSGQPLPPGW 113 (384)
T ss_pred CCCCCEEEEEecCCcH-hHHHHHHHHHHhCCCCCc-eEEEEEeCCCCCcH-HHHHHHHHHhcCCCCcEEEecCCCCCCCC
Confidence 4578999999999999 999999999999998742 79999999999985 557788777665 2688887533 3
Q ss_pred CChHHHHHHHHhhcc-----CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeec
Q psy10463 269 VGLIKARLLGARQAE-----GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNW 343 (605)
Q Consensus 269 ~G~~~arN~G~~~A~-----gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~ 343 (605)
.|...|+|.|+++|+ ||+|+|+|+|+.++|+||+.+++.+.+++..++++.........+... . ...+.+
T Consensus 114 ~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~~~~~~~--~---~~~~~~ 188 (384)
T TIGR03469 114 SGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCESFWEKL--L---IPAFVF 188 (384)
T ss_pred cchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCCCHHHHH--H---HHHHHH
Confidence 577889999999999 999999999999999999999999988776666543211111100000 0 000000
Q ss_pred cceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceE
Q psy10463 344 ELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH 423 (605)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~ 423 (605)
... ...+. . . ..+.. .......|+++++||++|+++||||+.... ..||++|+.|+++.|+++.+.+...
T Consensus 189 ~~~-~~~~~--~---~-~~~~~--~~~~~~~G~~~lirr~~~~~vGGf~~~~~~-~~ED~~L~~r~~~~G~~v~~~~~~~ 258 (384)
T TIGR03469 189 FFQ-KLYPF--R---W-VNDPR--RRTAAAAGGCILIRREALERIGGIAAIRGA-LIDDCTLAAAVKRSGGRIWLGLAAR 258 (384)
T ss_pred HHH-Hhcch--h---h-hcCCC--ccceeecceEEEEEHHHHHHcCCHHHHhhC-cccHHHHHHHHHHcCCcEEEEecCc
Confidence 000 00000 0 0 00000 123346789999999999999999986554 3799999999999999999876654
Q ss_pred EE
Q psy10463 424 VA 425 (605)
Q Consensus 424 v~ 425 (605)
..
T Consensus 259 ~~ 260 (384)
T TIGR03469 259 TR 260 (384)
T ss_pred eE
Confidence 43
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms. |
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=208.94 Aligned_cols=202 Identities=19% Similarity=0.179 Sum_probs=140.6
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC-CCCEEEEeCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~-~~~v~~i~~~~n~G~~~a 274 (605)
..|.||||||+||++ ..+.++|.|+++|++++ +|||||||||++. +.++++.+.+ ..++++++++.|.|.+.|
T Consensus 3 ~~p~VSVIip~yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~~---~~~~~~~~~~~~~ri~~i~~~~n~G~~~a 76 (279)
T PRK10018 3 DNPLISIYMPTWNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTSW---EQLQQYVTALNDPRITYIHNDINSGACAV 76 (279)
T ss_pred CCCEEEEEEEeCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCH---HHHHHHHHHcCCCCEEEEECCCCCCHHHH
Confidence 368999999999999 99999999999999887 7999999999852 2455665542 238999999999999999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
+|.|++.|+|+||+|||+|+.+.|++|+.+++.+.+... .++..--....+..+ +. .......+..
T Consensus 77 ~N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~~~~~~~p~~ 143 (279)
T PRK10018 77 RNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVY----------SQ---PASLPLYPKS 143 (279)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecCccc----------cc---ccccCCCCCC
Confidence 999999999999999999999999999999999876432 222211000000000 00 0000000000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceE-EEEE
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH-VAHL 427 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~-v~H~ 427 (605)
...... +......|...++.+..+. .++||+.+. ..||+||++|+...|+....+|.+. ++|+
T Consensus 144 ~~~~~~--------~~~~n~ig~~~~~~~~~~~-~~~fd~~~~--~~eDydlwlrl~~~~~~~~~~~~~l~~y~~ 207 (279)
T PRK10018 144 PYSRRL--------FYKRNIIGNQVFTWAWRFK-ECLFDTELK--AAQDYDIFLRMVVEYGEPWKVEEATQILHI 207 (279)
T ss_pred CCCHHH--------HHHhcCcCceeeehhhhhh-hcccCCCCC--ccccHHHHHHHHHhcCceEeeccceEEEEc
Confidence 000000 0011233444445555554 568999987 4899999999999999999999984 4454
|
|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=200.99 Aligned_cols=195 Identities=22% Similarity=0.208 Sum_probs=146.0
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||++ +.|.++|.|+.+|+.+. +|||||||+|+|++ .+.++++... +.++...++.|.+.|+|.|++
T Consensus 1 sivi~~~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~-~~~~~~~~~~----~~~~~~~~~~g~~~a~n~~~~ 72 (202)
T cd06433 1 SIITPTYNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGT-VDIIKKYEDK----ITYWISEPDKGIYDAMNKGIA 72 (202)
T ss_pred CEEEeccchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccH-HHHHHHhHhh----cEEEEecCCcCHHHHHHHHHH
Confidence 7999999999 99999999999999877 79999999999984 4466665442 445556788999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
.|+|+||+|+|+|+.+.++++..++..+...+ ..++++.....+........ . . ......
T Consensus 73 ~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~--------~--------~-~~~~~~-- 133 (202)
T cd06433 73 LATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGR--------R--------R-PPPFLD-- 133 (202)
T ss_pred HcCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccC--------C--------C-Ccchhh--
Confidence 99999999999999999999999996665543 45555443322222111000 0 0 000000
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
........+.+++++++|++|.++|+||+.+.. +||.||++|+++.|+++.+.|...+.|...
T Consensus 134 -----~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~ 196 (202)
T cd06433 134 -----KFLLYGMPICHQATFFRRSLFEKYGGFDESYRI--AADYDLLLRLLLAGKIFKYLPEVLAAFRLG 196 (202)
T ss_pred -----hHHhhcCcccCcceEEEHHHHHHhCCCchhhCc--hhhHHHHHHHHHcCCceEecchhhhhheec
Confidence 000112245566788999999999999999873 689999999999999999999988776643
|
Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=191.76 Aligned_cols=165 Identities=24% Similarity=0.383 Sum_probs=143.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||+. +.+.++++|+.+|+.+. .|||||||||++++.. .+.++ .+ +++++..+.+.|.+.|+|.|++.
T Consensus 1 vii~~~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~-~~~~~---~~-~~~~~~~~~~~g~~~a~n~~~~~ 72 (166)
T cd04186 1 IIIVNYNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVE-LLREL---FP-EVRLIRNGENLGFGAGNNQGIRE 72 (166)
T ss_pred CEEEecCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHH-HHHHh---CC-CeEEEecCCCcChHHHhhHHHhh
Confidence 689999998 99999999999998754 7999999999987533 33332 22 69999999999999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCCcE-EEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDRTR-VVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+++++++|+|+|+.+.++|++.+++.+.+.+.. ++++.
T Consensus 73 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------------------- 111 (166)
T cd04186 73 AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK----------------------------------------- 111 (166)
T ss_pred CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-----------------------------------------
Confidence 999999999999999999999999988776543 33211
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
..|++++++|++|.++|+||+.+.. ++||.+|+.|+.+.|+++.+.|++.++|.+
T Consensus 112 ------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~h~~ 166 (166)
T cd04186 112 ------------VSGAFLLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIYHHG 166 (166)
T ss_pred ------------CceeeEeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEEecC
Confidence 5678899999999999999999876 589999999999999999999999999963
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=204.23 Aligned_cols=201 Identities=19% Similarity=0.269 Sum_probs=142.5
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC-CCCEEEEeCC--CCCChHHHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSP--GRVGLIKARLLG 278 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~-~~~v~~i~~~--~n~G~~~arN~G 278 (605)
||||+||+. +.|.+||+|++.|+++...+|||||||+|+|++.. .++ +.... ..+++++..+ .+.|.+.|+|.|
T Consensus 1 viip~~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~-~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g 77 (229)
T cd04192 1 VVIAARNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQ-ILE-FAAAKPNFQLKILNNSRVSISGKKNALTTA 77 (229)
T ss_pred CEEEecCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHH-HHH-HHHhCCCcceEEeeccCcccchhHHHHHHH
Confidence 699999999 99999999999999876557999999999997543 555 33332 2378888776 578999999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
++.++||||+|+|+|+.+.|+||+.+++.+.+++..++++.......+.+... ...+.+ .........
T Consensus 78 ~~~~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~------~~~~~~~~~ 145 (229)
T cd04192 78 IKAAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAK------FQRLDW------LSLLGLIAG 145 (229)
T ss_pred HHHhcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccHHHH------HHHHHH------HHHHHHHhh
Confidence 99999999999999999999999999998887766544443221111110000 000000 000000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCC-eEEEecceE
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGG-SIEIAPCSH 423 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~-~i~~~p~s~ 423 (605)
. .... ......|++++++|++|+++||||+.+.. ..||.|+++|+.++|+ ++.+.+...
T Consensus 146 ~--~~~~---~~~~~~g~~~~~rr~~~~~~ggf~~~~~~-~~eD~~~~~~~~~~g~~~~~~~~~~~ 205 (229)
T cd04192 146 S--FGLG---KPFMCNGANMAYRKEAFFEVGGFEGNDHI-ASGDDELLLAKVASKYPKVAYLKNPE 205 (229)
T ss_pred H--HHhc---CccccccceEEEEHHHHHHhcCCcccccc-ccCCHHHHHHHHHhCCCCEEEeeCcc
Confidence 0 0000 11234688899999999999999988765 4899999999999999 888875433
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=205.54 Aligned_cols=202 Identities=20% Similarity=0.215 Sum_probs=147.5
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCC-CCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~-~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
||||+||++ ..|.++|+|+.+|+. .. .|||||||+|+|++ .+.++++.++.+ .+++++.+.|.|.+.|+|.|++
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~~~--~eiiiVDd~S~d~t-~~~~~~~~~~~~-~i~~~~~~~n~G~~~a~n~g~~ 75 (224)
T cd06442 1 IIIPTYNER-ENIPELIERLDAALKGID--YEIIVVDDNSPDGT-AEIVRELAKEYP-RVRLIVRPGKRGLGSAYIEGFK 75 (224)
T ss_pred CeEeccchh-hhHHHHHHHHHHhhcCCC--eEEEEEeCCCCCCh-HHHHHHHHHhCC-ceEEEecCCCCChHHHHHHHHH
Confidence 699999999 999999999999986 33 79999999999975 447778877777 7899999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
.|+||+|+|||+|+.+.|+||+.+++.+..++. .++++... ... .. ..|....++..........
T Consensus 76 ~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~-~~~-~~------------~~~~~~~~~~~~~~~~~~~ 141 (224)
T cd06442 76 AARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYV-EGG-GV------------EGWGLKRKLISRGANLLAR 141 (224)
T ss_pred HcCCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEeeee-cCC-cc------------CCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999655544 44443321 000 00 1111111000000011111
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhC-CCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIG-AYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG-gfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
.. . ....+...|++++++|++|+++| ++++... .+|+||++|++++|+++..+|...+.|...
T Consensus 142 ~~--~--~~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~---~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g 205 (224)
T cd06442 142 LL--L--GRKVSDPTSGFRAYRREVLEKLIDSLVSKGY---KFQLELLVRARRLGYRIVEVPITFVDREHG 205 (224)
T ss_pred HH--c--CCCCCCCCCccchhhHHHHHHHhhhccCCCc---EEeHHHHHHHHHcCCeEEEeCeEEeccCCC
Confidence 00 0 11233566788999999999998 4443221 357899999999999999999988877654
|
Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, |
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=221.80 Aligned_cols=210 Identities=15% Similarity=0.121 Sum_probs=150.4
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC-CEEEEeCCCCCCh---
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVGL--- 271 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~-~v~~i~~~~n~G~--- 271 (605)
..|.||||||+||++ +.+.+||+|+++|+++. +|||++||+|+|++ .++++++.+++|. +++++..+.+.|.
T Consensus 39 ~~p~VSViiP~~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t-~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K 114 (373)
T TIGR03472 39 AWPPVSVLKPLHGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPA-LAVVRRLRADFPDADIDLVIDARRHGPNRK 114 (373)
T ss_pred CCCCeEEEEECCCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcH-HHHHHHHHHhCCCCceEEEECCCCCCCChH
Confidence 378999999999999 99999999999999987 79999999999875 4588888888772 4788887777774
Q ss_pred HHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEee
Q psy10463 272 IKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 272 ~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
..+.+.++++|+||+|+|+|+|+.++|+||+.+++.+++...+++++.....+..++. .. .. ...... ..
T Consensus 115 ~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~~~~~--~~----l~--~~~~~~--~~ 184 (373)
T TIGR03472 115 VSNLINMLPHARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPVPGFW--SR----LG--AMGINH--NF 184 (373)
T ss_pred HHHHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCCCCHH--HH----HH--HHHhhh--hh
Confidence 3445567899999999999999999999999999999765666665432111111110 00 00 000000 00
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEE
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAH 426 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H 426 (605)
.+...... . .. ......|++|++||++|+++||||+.... -.||++|+.|++++|+++.+.|.+...+
T Consensus 185 ~~~~~~~~-~---~~--~~~~~~G~~~a~RR~~l~~iGGf~~~~~~-~~ED~~l~~~i~~~G~~v~~~~~~v~~~ 252 (373)
T TIGR03472 185 LPSVMVAR-A---LG--RARFCFGATMALRRATLEAIGGLAALAHH-LADDYWLGELVRALGLRVVLAPVVVDTD 252 (373)
T ss_pred hHHHHHHH-h---cc--CCccccChhhheeHHHHHHcCChHHhccc-chHHHHHHHHHHHcCCeEEecchhhhcC
Confidence 11100000 0 00 01224688999999999999999975543 3799999999999999999998764443
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano |
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=206.00 Aligned_cols=214 Identities=17% Similarity=0.166 Sum_probs=152.8
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~~~a 274 (605)
..|++|||||+||++ ..+..++.++.++......+|||||||||+|++ .++++++.+.++ ..++++..+.|.|++.|
T Consensus 7 ~~~~vsVvIp~yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t-~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a 84 (243)
T PLN02726 7 GAMKYSIIVPTYNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGT-QDVVKQLQKVYGEDRILLRPRPGKLGLGTA 84 (243)
T ss_pred CCceEEEEEccCCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCH-HHHHHHHHHhcCCCcEEEEecCCCCCHHHH
Confidence 468999999999999 899999888876532222379999999999985 457777776654 36888888999999999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCc
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
+|.|++.|+|+||+|+|+|+.++|+||+.+++.+.++...++.+.....+. . ..+..|. .+......
T Consensus 85 ~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~-------~----~~~~~~~--r~~~~~~~ 151 (243)
T PLN02726 85 YIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGG-------G----VHGWDLR--RKLTSRGA 151 (243)
T ss_pred HHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCC-------C----cCCccHH--HHHHHHHH
Confidence 999999999999999999999999999999999977665555443211000 0 0000000 00000000
Q ss_pred hhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEccc
Q psy10463 355 SDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRK 430 (605)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~ 430 (605)
....... .....+...|++++++|+++++++.+.+... | .+|+||++|+...|+++..+|.+.+.|....
T Consensus 152 ~~~~~~~----~~~~~~d~~g~~~~~rr~~~~~i~~~~~~~~-~-~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~ 221 (243)
T PLN02726 152 NVLAQTL----LWPGVSDLTGSFRLYKRSALEDLVSSVVSKG-Y-VFQMEIIVRASRKGYRIEEVPITFVDRVYGE 221 (243)
T ss_pred HHHHHHH----hCCCCCcCCCcccceeHHHHHHHHhhccCCC-c-EEehHHHHHHHHcCCcEEEeCcEEeCCCCCc
Confidence 0000000 0112345678899999999999987655432 2 4689999999999999999999888776543
|
|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=197.29 Aligned_cols=186 Identities=22% Similarity=0.218 Sum_probs=135.8
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
||||||+||++ ..+.++|.|+++|+++. .|||||||+|+|++.. .+++ . +++++. .+.|.+.|+|.|+
T Consensus 1 vsvii~~~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~-~~~~-----~-~~~~~~--~~~g~~~a~n~g~ 68 (221)
T cd02522 1 LSIIIPTLNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVA-IARS-----A-GVVVIS--SPKGRARQMNAGA 68 (221)
T ss_pred CEEEEEccCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHH-HHhc-----C-CeEEEe--CCcCHHHHHHHHH
Confidence 69999999999 89999999999998754 7999999999998543 3322 2 566665 4578999999999
Q ss_pred hhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 280 RQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
+.|+|++++|+|+|+.+.++||++++..+......++++.....+.... +. .....+..
T Consensus 69 ~~a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~-------------- 127 (221)
T cd02522 69 AAARGDWLLFLHADTRLPPDWDAAIIETLRADGAVAGAFRLRFDDPGPR-LR------LLELGANL-------------- 127 (221)
T ss_pred HhccCCEEEEEcCCCCCChhHHHHHHHHhhcCCcEEEEEEeeecCCccc-hh------hhhhcccc--------------
Confidence 9999999999999999999999999887776655554433322111110 00 00000000
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
....... ...+.+++++|++|+++||||+.+ .+||+||++|++++|+++.+ |...+.+.
T Consensus 128 ----~~~~~~~-~~~~~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~-~~~~~~~~ 186 (221)
T cd02522 128 ----RSRLFGL-PYGDQGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL-PSPVTTSA 186 (221)
T ss_pred ----eecccCC-CcCCceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc-Cceeeecc
Confidence 0000111 123457899999999999999998 48999999999999999887 66655543
|
Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=209.72 Aligned_cols=214 Identities=18% Similarity=0.151 Sum_probs=148.9
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
..|.||||||+||++ +.|.+||+|+++|++++ +|||||||||+|++ .++++++.++.+ ++++++. +|.|.+.|+
T Consensus 4 ~~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t-~~i~~~~~~~~~-~i~vi~~-~n~G~~~ar 77 (328)
T PRK10073 4 STPKLSIIIPLYNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNS-VEIAKHYAENYP-HVRLLHQ-ANAGVSVAR 77 (328)
T ss_pred CCCeEEEEEeccCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccH-HHHHHHHHhhCC-CEEEEEC-CCCChHHHH
Confidence 368999999999999 99999999999999876 79999999999985 458888888887 8999975 589999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
|.|++.|+|+||+|+|+|+.+.|++++.+++.+.++...++.........+.-....... . . .+.......+..
T Consensus 78 N~gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~---~--~-~~~~~~~~~~~~ 151 (328)
T PRK10073 78 NTGLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLDVAQCNADWCFRDTGETWQSIP---S--D-RLRSTGVLSGPD 151 (328)
T ss_pred HHHHHhCCCCEEEEECCCCccChhHHHHHHHHHHhCCCCEEEEccEEEEeCCCccccccc---c--c-cccccceechHH
Confidence 999999999999999999999999999999998776544433221111111000000000 0 0 000000000011
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCC-CCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGA-YDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGg-fDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
........ ..+ +. ...+-++||+++++.|. |++++. .||+++++++...+.++.++|.....+..+
T Consensus 152 ~l~~~l~~--~~~--~~-~~~~~l~Rr~~l~~~~~~f~~~~~---~eD~~~~~~~~~~~~~v~~~~~~ly~Yr~~ 218 (328)
T PRK10073 152 WLRMALSS--RRW--TH-VVWLGVYRRDFIVKNNIKFEPGLH---HQDIPWTTEVMFNALRVRYTEQSLYKYYLH 218 (328)
T ss_pred HHHHHHhh--CCC--Cc-cHhHHHHHHHHHHHcCCccCCCCE---eccHHHHHHHHHHCCEEEEECCCEEEEEec
Confidence 11100000 000 00 11123689999999884 777764 699999999999999999999976655443
|
|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=203.30 Aligned_cols=207 Identities=21% Similarity=0.234 Sum_probs=156.4
Q ss_pred cccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 194 EEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 194 ~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
....|++|||||+||++ +.|.++|.|+++|+++...+|||||||+|+|++ .+.++++.+. +++++..+.+.|.+.
T Consensus 25 ~~~~~~isVvip~~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t-~~~~~~~~~~---~v~~i~~~~~~g~~~ 99 (251)
T cd06439 25 PAYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGT-AEIAREYADK---GVKLLRFPERRGKAA 99 (251)
T ss_pred CCCCCEEEEEEecCCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccH-HHHHHHHhhC---cEEEEEcCCCCChHH
Confidence 34578999999999999 999999999999987765579999999999974 4466666543 599999999999999
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
|+|.|++.|+||||+|+|+|+.++++||+.+++.+.++...++++.....++.. ... .....|.+ .
T Consensus 100 a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~--~~~-----~~~~~~~~-------~ 165 (251)
T cd06439 100 ALNRALALATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGG--SGS-----GEGLYWKY-------E 165 (251)
T ss_pred HHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcc--cch-----hHHHHHHH-------H
Confidence 999999999999999999999999999999999998666677777664444332 000 00000100 0
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
...... .. .........|++++++|+.|+ +|++.. ..||.+|+.|+...|+++.+.|.+.++|...
T Consensus 166 ~~~~~~-~~---~~~~~~~~~g~~~~~rr~~~~---~~~~~~---~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~ 231 (251)
T cd06439 166 NWLKRA-ES---RLGSTVGANGAIYAIRRELFR---PLPADT---INDDFVLPLRIARQGYRVVYEPDAVAYEEVA 231 (251)
T ss_pred HHHHHH-HH---hcCCeeeecchHHHhHHHHhc---CCCccc---chhHHHHHHHHHHcCCeEEeccccEEEEeCc
Confidence 000000 00 011123466778889999998 665543 3799999999999999999999999988763
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. |
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=197.99 Aligned_cols=202 Identities=15% Similarity=0.146 Sum_probs=149.3
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||++ ..|.++|.|+++|+++. +|||||||||+|+ +.+.++++.++++..++++..+.+.|.++++|.|++
T Consensus 1 sIvIp~yn~~-~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~-t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~ 76 (214)
T cd04196 1 AVLMATYNGE-KYLREQLDSILAQTYKN--DELIISDDGSTDG-TVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQ 76 (214)
T ss_pred CEEEEecCcH-HHHHHHHHHHHhCcCCC--eEEEEEeCCCCCC-cHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHH
Confidence 7999999999 99999999999999875 7999999999997 555788888877656888999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
.|+|+||+|+|+|+.+.|++|+.+++.+..++. .++++.....+.+..... ...+ ....+ .. ....
T Consensus 77 ~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~--~~-~~~~--- 143 (214)
T cd04196 77 AADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIG------ESFF-EYQKI--KP-GTSF--- 143 (214)
T ss_pred hCCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcc------cccc-ccccc--CC-ccCH---
Confidence 999999999999999999999999999655443 454443222222110000 0000 00000 00 0000
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
........+.|++++++|++++++|+|++.+. ..||.++.+++.. |+++.++|...+.|.
T Consensus 144 -----~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~~D~~~~~~~~~-~~~~~~~~~~~~~~r 203 (214)
T cd04196 144 -----NNLLFQNVVTGCTMAFNRELLELALPFPDADV--IMHDWWLALLASA-FGKVVFLDEPLILYR 203 (214)
T ss_pred -----HHHHHhCccCCceeeEEHHHHHhhcccccccc--ccchHHHHHHHHH-cCceEEcchhHHHHh
Confidence 00111234567889999999999999999863 3799999998877 779999998876543
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=225.43 Aligned_cols=211 Identities=17% Similarity=0.181 Sum_probs=149.3
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCC-ChHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRV-GLIK 273 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~-G~~~ 273 (605)
...|+|||+||+|||+.+.+.+++.+++++++|...+||+||||||+|++ . +++++. ++++++.++|. |.++
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-~----~la~~~--~v~yI~R~~n~~gKAG 329 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-R----QFAQEV--GVKYIARPTHEHAKAG 329 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-H----HHHHHC--CcEEEEeCCCCcchHH
Confidence 34689999999999984456789999999999876689999999999974 3 334443 58888776554 5789
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
+.|.|+++++||||+++|+|+.+.+++|+.++..+.+++. ++|.+.....+++.+... .+.+.. ...
T Consensus 330 nLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rn------l~~~~~------~~~ 397 (852)
T PRK11498 330 NINNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERN------LGRFRK------TPN 397 (852)
T ss_pred HHHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHh------hHHHhh------ccc
Confidence 9999999999999999999999999999999998766654 555433222222211100 000000 000
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
.+..................+.|+++++||++++++||||++.. .||.|+++|+.+.|+++.++|...+...
T Consensus 398 e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeVGGfd~~ti---tED~dlslRL~~~Gyrv~yl~~~~a~gl 469 (852)
T PRK11498 398 EGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETV---TEDAHTSLRLHRRGYTSAYMRIPQAAGL 469 (852)
T ss_pred chhHHHHHHHhHHHhhcccccccceeeeEHHHHHHhcCCCCCcc---CccHHHHHHHHHcCCEEEEEeccceeEE
Confidence 00000000000001122345678999999999999999999852 7999999999999999999987766543
|
|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-22 Score=224.45 Aligned_cols=215 Identities=20% Similarity=0.204 Sum_probs=152.1
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHH-------------HHHHHHHHHHCCCCEE
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL-------------KSSLDEYVAKLSVPTR 261 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~-------------~~~l~~~~~~~~~~v~ 261 (605)
+..|+||||||+|||+.+.+.+++.+++++++|...+||+||||||+|++. .+.+++++++. +++
T Consensus 128 ~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~--~v~ 205 (713)
T TIGR03030 128 EEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL--GVN 205 (713)
T ss_pred ccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc--CcE
Confidence 457899999999999933456799999999998655899999999998752 23456666655 588
Q ss_pred EEeCCCCC-ChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEe-eeEeeecCCeeEEecccccce
Q psy10463 262 VIRSPGRV-GLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVC-PVIDIISDVTFAYVRSFELHW 338 (605)
Q Consensus 262 ~i~~~~n~-G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~-p~i~~i~~~~~~~~~~~~~~~ 338 (605)
+++.++|. +.+++.|.|+++++||||+++|+|+.+.|++|++++..+.+++. +++. |.. ..+++.+... .
T Consensus 206 yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~-f~~p~~~~~n------l 278 (713)
T TIGR03030 206 YITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHF-FVSPDPIERN------L 278 (713)
T ss_pred EEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCee-ccCCCHHhhh------h
Confidence 88877765 56889999999999999999999999999999999999977655 4443 322 1222211100 0
Q ss_pred eeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEE
Q psy10463 339 GAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEI 418 (605)
Q Consensus 339 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 418 (605)
+.+. ......................+.+.|+++++||++++++||||++.. .||+++++|+..+|+++.+
T Consensus 279 ~~~~------~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y 349 (713)
T TIGR03030 279 GTFR------RMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAY 349 (713)
T ss_pred HHHH------HhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEE
Confidence 0000 000000000000000001112334678899999999999999998653 7999999999999999999
Q ss_pred ecceEEEEE
Q psy10463 419 APCSHVAHL 427 (605)
Q Consensus 419 ~p~s~v~H~ 427 (605)
.|.+.+.+.
T Consensus 350 ~~~~~~~g~ 358 (713)
T TIGR03030 350 LDRPLIAGL 358 (713)
T ss_pred ecccccccc
Confidence 999887654
|
Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. |
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=191.51 Aligned_cols=191 Identities=13% Similarity=0.072 Sum_probs=134.1
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcC---CCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRS---PRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~---~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~a 274 (605)
|++|||||+||++ +.|.++|+|+.++. +.. +|||||||||+|++ .++++++.... +++++..+ +.|++.|
T Consensus 1 ~~vSVIi~~yN~~-~~l~~~l~sl~~~~~~~~~~--~EiIVvDdgStD~t-~~i~~~~~~~~--~i~~i~~~-~~G~~~A 73 (248)
T PRK10063 1 MLLSVITVAFRNL-EGIVKTHASLRHLAQDPGIS--FEWIVVDGGSNDGT-REFLENLNGIF--NLRFVSEP-DNGIYDA 73 (248)
T ss_pred CeEEEEEEeCCCH-HHHHHHHHHHHHHHhCCCCC--EEEEEEECcCcccH-HHHHHHhcccC--CEEEEECC-CCCHHHH
Confidence 6899999999999 99999999998642 333 79999999999985 44666664332 58888765 6799999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
+|.|++.|+||||+|||+|+.+.|+.++.+......++. .+++..+... .+..... . ...+
T Consensus 74 ~N~Gi~~a~g~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~~~~~~------~-----------~~~~ 135 (248)
T PRK10063 74 MNKGIAMAQGRFALFLNSGDIFHQDAANFVRQLKMQKDNAMIIGDALLDF-GDGHKIK------R-----------SAKP 135 (248)
T ss_pred HHHHHHHcCCCEEEEEeCCcccCcCHHHHHHHHHhCCCCeEEEeeeEEEc-CCCcEEE------E-----------ccCC
Confidence 999999999999999999999999987654444334444 3444332111 1100000 0 0000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEE
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAH 426 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H 426 (605)
.... . ...+ +.+..++++|+.+. .|+||+.+. ..||+||++|+...|.++..+|......
T Consensus 136 ~~~~-~--------~~~~-~~~~~~~~~~~~~~-~~~fd~~~~--~~~Dydl~lrl~~~g~~~~~v~~~l~~y 195 (248)
T PRK10063 136 GWYI-Y--------HSLP-ASHQAIFFPVSGLK-KWRYDLQYK--VSSDYALAARLYKAGYAFKKLNGLVSEF 195 (248)
T ss_pred hhHH-h--------cCCC-CCCcEEEEEHHHHh-cCCCCcccc--hHHhHHHHHHHHHcCCcEEEcCceeEEE
Confidence 0000 0 0011 23345678999886 478999886 3799999999999999999999887764
|
|
| >KOG3737|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=193.16 Aligned_cols=386 Identities=23% Similarity=0.292 Sum_probs=204.2
Q ss_pred eEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEE
Q psy10463 124 EILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIV 203 (605)
Q Consensus 124 EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVI 203 (605)
|||+|||.|+.+.+++.|++|+..++..|+|++++++.|+..||.+|+..|+|++++|||++||+...|+++.+..++
T Consensus 189 eivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~REGLI~aRSiGA~~atGeV~ifLDAHCEVntNWlpPLlAPI~-- 266 (603)
T KOG3737|consen 189 EIVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERREGLIQARSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAPIS-- 266 (603)
T ss_pred eEEEeccCCccHHHHHHHHHHHHHhcCEEEEEecchhhhhhhhhccchhhccccEEEEEecceeeecccccccccccc--
Confidence 899999999999999999999999999999999999999999999999999999999999999999999987765443
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE 283 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~ 283 (605)
.|+. -...-.|..| . ...+|++-|-.+..+ ....+.+ + |
T Consensus 267 ---rdRt-vmTVP~IDgI---d--~n~~EyrpvyG~dn~-h~rGife-W-------------------------g----- 305 (603)
T KOG3737|consen 267 ---RDRT-VMTVPLIDGI---D--GNTYEYRPVYGGDND-HARGIFE-W-------------------------G----- 305 (603)
T ss_pred ---cCce-EEEEeeeeee---c--CCceEEeeccCCcch-hhcchhh-h-------------------------h-----
Confidence 0110 0000000000 0 011454444222111 1111100 0 0
Q ss_pred CCEEEEecCCcccCcChHHHHHHHHHcC---C--c-EEEeeeEeeecCCeeE----EecccccceeeeeccceeeEeecC
Q psy10463 284 GEILVFLDAHCECTLGWLENLVARVAED---R--T-RVVCPVIDIISDVTFA----YVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 284 gd~i~flD~D~~~~~~~L~~ll~~~~~~---~--~-~vv~p~i~~i~~~~~~----~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
......-|.+--.+...+ + . .-+ +-+..|+...|. |..+..+ ||+.+++++|+.+.|+
T Consensus 306 ----------mLyKe~~~t~rE~r~RkhnsePyRSPthA-GGLfAInRe~F~ELG~YDpgLqi-WGGEnfElSfKIWQCG 373 (603)
T KOG3737|consen 306 ----------MLYKEVPLTPREKRLRKHNSEPYRSPTHA-GGLFAINREFFFELGLYDPGLQI-WGGENFELSFKIWQCG 373 (603)
T ss_pred ----------heeccCCCCHHHHHhhhccCCCCCCcccc-cceeeehHHHHHHhccCCCccee-ecCcceeEEEEEEeeC
Confidence 000001111111111111 0 0 111 112344554442 4444444 9999999999999999
Q ss_pred chhHhhhccCCCCcccccc-ccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCC
Q psy10463 354 SSDAIIKRKDFTEPFKTPA-MAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKAS 432 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~-~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~ 432 (605)
+.....++......+++-. ..++-+.+. +|+--.. -++--....|...++-++. -.....
T Consensus 374 G~i~fVPCSrVGHvYR~~mpy~fgk~~~k------~~~p~i~------iNy~RVvetW~Ddyk~Yfy------treP~a- 434 (603)
T KOG3737|consen 374 GKILFVPCSRVGHVYRSLMPYQFGKPPIK------VGSPPIL------INYVRVVETWWDDYKDYFY------TREPEA- 434 (603)
T ss_pred CEEEEEEccccchhhhccccccCCCCccc------cCCCceE------eehhhHHHHHHHhhhhhee------ecChhh-
Confidence 8766554444444443210 001111100 0000000 0000011111111111110 000001
Q ss_pred CCCCCCCcchh--hhhhHHHHHHHH-hhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccc----cccccccCCC
Q psy10463 433 PYSFPGGVSEV--LYGNLARVALVW-MDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFK----WYLTHVWPHH 505 (605)
Q Consensus 433 ~~~~~~~~~~~--~~rn~~r~a~~W-~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~----wyl~~v~p~~ 505 (605)
.+.-+++.+.. +.........+| |++-..-.+..+|-.-+....|.+..-. .-.|-+-- -=.-..-|||
T Consensus 435 ~~l~~GDISeqlalr~~lnCkSFkWfMe~iAYDv~~~yP~lP~N~~WGE~R~~a----t~~ClDsMG~~p~g~mglt~CH 510 (603)
T KOG3737|consen 435 QALPYGDISEQLALREDLNCKSFKWFMEEIAYDVTSHYPLLPKNVDWGEIRGFA----TAYCLDSMGKTPGGFMGLTPCH 510 (603)
T ss_pred ccCCcccHHHHHHhHhhcCCchhHHHHHHHHHHHHhcCCCCCCCCcchhccCcc----cchhHHhcCCCCCCcccccccc
Confidence 11112333222 222222333445 3343333455556334566677662211 11231100 0011245788
Q ss_pred cCCCCCc----cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCC
Q psy10463 506 FLPMDDK----FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYE 580 (605)
Q Consensus 506 ~~p~~~~----~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~ 580 (605)
.++.++. ..|++- +...||.+. |..+.+--| .-+.-+-.|.|......+.+ .+++|++....
T Consensus 511 g~GgNQL~RlN~agQl~--qge~CltAd---------g~~i~~~hC-~lgtv~g~WqY~~~tk~~~H~~~~kC~~~se~- 577 (603)
T KOG3737|consen 511 GMGGNQLFRLNEAGQLM--QGEQCLTAD---------GSKIMITHC-NLGTVKGEWQYFKNTKRFTHIPSGKCLDRSEV- 577 (603)
T ss_pred CCCCceEEEeccccchh--ccceeeecC---------CceEEEEEe-ecccccCceehhhcchheeeccccccccccch-
Confidence 7777653 235554 368999953 567889999 44355667988744555554 56799998763
Q ss_pred CCCCCceEEEeCCCCC-CcceEeC
Q psy10463 581 NDISPRVRILACSGFN-RQRWTYD 603 (605)
Q Consensus 581 ~~~g~~v~l~~C~~~~-~Q~W~~~ 603 (605)
+.+|.+..|+.++ .|+|.+.
T Consensus 578 ---~~qv~l~~Cd~~~~~Qkw~~k 598 (603)
T KOG3737|consen 578 ---LHQVFLSNCDSSKTTQKWEMK 598 (603)
T ss_pred ---hheeeecccCCCchhheeehh
Confidence 4699999999888 9999875
|
|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=193.64 Aligned_cols=205 Identities=16% Similarity=0.131 Sum_probs=145.5
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
.||||||+||++.+.+.+||+|+.+|+ . .|||||||+|+|++.. .+.+ ....+ .++++. ..+.|.+.|+|.|
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~--~--~eiivvdd~s~d~~~~-~l~~-~~~~~-~~~v~~-~~~~g~~~a~n~g 72 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK--P--LEIIVVTDGDDEPYLS-ILSQ-TVKYG-GIFVIT-VPHPGKRRALAEG 72 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC--C--CEEEEEeCCCChHHHH-HHHh-hccCC-cEEEEe-cCCCChHHHHHHH
Confidence 479999999998789999999999998 2 6999999999998544 3322 22333 566664 6679999999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
++.|+||||+|+|+|+.+.|+||+.+++.+..+..+++++.+...+..... ... .+...+ ....... .
T Consensus 73 ~~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~~~~----~~~-~~~~~~------~~~~~~~-~ 140 (235)
T cd06434 73 IRHVTTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPRDSK----WSF-LAAEYL------ERRNEEI-R 140 (235)
T ss_pred HHHhCCCEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEeecCcccH----HHH-HHHHHH------HHHHHHH-H
Confidence 999999999999999999999999999999865667777765433331000 000 000000 0000000 0
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCccc--------ccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEM--------QVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~--------~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
. ... ..-..+.+.|++++++|++++++++ ++.+ ....+||.+|+.|+.+.|+++.+.|.+.++|.
T Consensus 141 ~-~~~--~~~~~~~~~G~~~~~rr~~l~~~~~-~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~ 213 (235)
T cd06434 141 A-AMS--YDGGVPCLSGRTAAYRTEILKDFLF-LEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTE 213 (235)
T ss_pred H-HHh--hCCCEEEccCcHHHHHHHHHhhhhh-HHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEE
Confidence 0 000 1112345678889999999998754 3333 12257999999999999999999999999987
|
Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. |
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=175.13 Aligned_cols=169 Identities=31% Similarity=0.423 Sum_probs=120.6
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||+. +.|.++|.|+++|+... .|||||||+|+++ +.+.++++.+ ...++++++.+.|.|++.++|.|++
T Consensus 1 Svvip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~-~~~~~~~~~~-~~~~i~~i~~~~n~g~~~~~n~~~~ 75 (169)
T PF00535_consen 1 SVVIPTYNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDE-TEEILEEYAE-SDPNIRYIRNPENLGFSAARNRGIK 75 (169)
T ss_dssp EEEEEESS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSS-HHHHHHHHHC-CSTTEEEEEHCCCSHHHHHHHHHHH
T ss_pred CEEEEeeCCH-HHHHHHHHHHhhccCCC--EEEEEeccccccc-cccccccccc-ccccccccccccccccccccccccc
Confidence 7999999998 99999999999996554 7999999999887 4557777766 3348999999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+|+++|++|+|+|+++.++||+.+++.+.+++..++.+.....+............ ..+...... ..
T Consensus 76 ~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~-- 142 (169)
T PF00535_consen 76 HAKGEYILFLDDDDIISPDWLEELVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRF----------SFWNRFERK-IF-- 142 (169)
T ss_dssp H--SSEEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEEEEEEEECTTETEECCCTS----------EEEECCHCH-HH--
T ss_pred ccceeEEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEEEEEEecCCccccccccch----------hhhhhhhhH-HH--
Confidence 99999999999999999999999999999977655554443333332222111110 001111111 11
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhC
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIG 389 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iG 389 (605)
........+...+++++++|++|+++|
T Consensus 143 --~~~~~~~~~~~~~~~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 143 --NNIRFWKISFFIGSCALFRRSVFEEIG 169 (169)
T ss_dssp --HTTHSTTSSEESSSCEEEEEHHHHHCH
T ss_pred --HhhhcCCcccccccEEEEEHHHHHhhC
Confidence 112223355678889999999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A .... |
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-20 Score=180.54 Aligned_cols=200 Identities=19% Similarity=0.173 Sum_probs=138.6
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCC--CCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSP--RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~--~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
||||+||++ +.|.++|+++++++. +...+|||||||||+|+ +.+.++++.++++..+++++++.|.|.++|+|.|+
T Consensus 1 iiip~yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~-t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~ 78 (211)
T cd04188 1 VVIPAYNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDG-TAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGM 78 (211)
T ss_pred CEEcccChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCc-hHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHH
Confidence 699999999 999999999999864 11238999999999998 45578888887774469999999999999999999
Q ss_pred hhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 280 RQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
+.|+||||+|+|+|+.++|++++.+++.+.+++. .++++.... ...... ...|...+ .........
T Consensus 79 ~~a~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~-~~~~~~----------~~~~~~~~--~~~~~~~~~ 145 (211)
T cd04188 79 LAARGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHL-ASAAVV----------KRSWLRNL--LGRGFNFLV 145 (211)
T ss_pred HHhcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeecc-CCcccc----------cccHHHHH--HHHHHHHHH
Confidence 9999999999999999999999999999766554 444433211 111000 00000000 000000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecce
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCS 422 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s 422 (605)
... ...++ .. ...+..+++|+++.++++..+. ..| .+|+||++|+.+.|+++..+|-.
T Consensus 146 ~~~--~~~~~-~d-~~~g~~~~~r~~~~~~~~~~~~-~~~-~~d~el~~r~~~~g~~~~~vpi~ 203 (211)
T cd04188 146 RLL--LGLGI-KD-TQCGFKLFTRDAARRLFPRLHL-ERW-AFDVELLVLARRLGYPIEEVPVR 203 (211)
T ss_pred HHH--cCCCC-cc-cccCceeEcHHHHHHHHhhhhc-cce-EeeHHHHHHHHHcCCeEEEcCcc
Confidence 000 00111 11 2235668999999999754322 233 57999999999999999999943
|
UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. |
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-20 Score=179.64 Aligned_cols=182 Identities=19% Similarity=0.149 Sum_probs=132.0
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||+. +.+.++|.|+.+|++....+|||||||+|+|+ +.+.++++..+.+ .++++..++|.|.++|+|.|++.
T Consensus 1 iii~~~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~-~~~~~~~~~~~~~-~~~~~~~~~n~G~~~a~n~g~~~ 77 (185)
T cd04179 1 VVIPAYNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDG-TAEIARELAARVP-RVRVIRLSRNFGKGAAVRAGFKA 77 (185)
T ss_pred CeecccChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCC-hHHHHHHHHHhCC-CeEEEEccCCCCccHHHHHHHHH
Confidence 689999999 99999999999998632238999999999987 4557888888877 78999999999999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
|+|||++|+|+|+.+.|+||+.++..+...+. .++++.... ++. ........... .....
T Consensus 78 a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~-~~~-----~~~~~~~~~~~------------~~~~~- 138 (185)
T cd04179 78 ARGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFVR-GGG-----AGMPLLRRLGS------------RLFNF- 138 (185)
T ss_pred hcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeecC-CCc-----ccchHHHHHHH------------HHHHH-
Confidence 99999999999999999999999999655544 555544321 111 00000000000 00000
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHh--CCCCcccccccchhhHHHHHH
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHI--GAYDEEMQVWGGENLEMSFRV 409 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~i--GgfDe~~~~~g~ED~dl~~Rl 409 (605)
............+.|++++++|++|+++ |+++++|. +|.|+++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~~~----~~~~~~~~~ 185 (185)
T cd04179 139 LIRLLLGVRISDTQSGFRLFRREVLEALLSLLESNGFE----FGLELLVGA 185 (185)
T ss_pred HHHHHcCCCCcCCCCceeeeHHHHHHHHHhhccccCcc----eeeEeeecC
Confidence 0000012234567788999999999999 77877764 567777763
|
DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex |
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=194.34 Aligned_cols=210 Identities=24% Similarity=0.233 Sum_probs=155.8
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC-CCCCChHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS-PGRVGLIKAR 275 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~-~~n~G~~~ar 275 (605)
.|++||+||+|||+...+.+++.|+.+|+++. +|||+|||+|+|++ .+.+++...+++.+++++.. .++.|.++|.
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al 129 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDET-YEILEELGAEYGPNFRVIYPEKKNGGKAGAL 129 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhH-HHHHHHHHhhcCcceEEEeccccCccchHHH
Confidence 59999999999999339999999999999988 79999999999984 55788888877436777754 6788999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
|.|+..++||+|+++|+|..++||+|.+++..+..++..+++........... ...-.....+.....+
T Consensus 130 ~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~---~~~l~~~~~~~~~~~~-------- 198 (439)
T COG1215 130 NNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDP---SNLLGRIQAIEYLSAF-------- 198 (439)
T ss_pred HHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCCh---hhhcchhcchhhhhhH--------
Confidence 99999999999999999999999999999999999877644322211111000 0000000000000000
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEE
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~ 425 (605)
.... ...........+.|++.++||++++++||+++..- .||.++++|+...|+++.++|++.+.
T Consensus 199 ~~~~--~~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~~~~ 263 (439)
T COG1215 199 YFRL--RAASKGGLISFLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEAIVW 263 (439)
T ss_pred HHhh--hhhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecceEe
Confidence 0000 00000113456789999999999999999999875 79999999999999999999998544
|
|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=168.60 Aligned_cols=179 Identities=25% Similarity=0.247 Sum_probs=127.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||++ +.|.++|.|+++|+.+. +|||||||+|++.+.. .+.++....+..+.++..+++.|++.++|.|++.
T Consensus 1 Viip~~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~ 76 (180)
T cd06423 1 IIVPAYNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLE-ILEELAALYIRRVLVVRDKENGGKAGALNAGLRH 76 (180)
T ss_pred CeecccChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHH-HHHHHhccccceEEEEEecccCCchHHHHHHHHh
Confidence 689999999 99999999999998755 7999999999998544 5666655443357888899999999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
++++|++|+|+|+.+.++||+.++..+.+++ ..++++.........-...... ...+. ...... ..
T Consensus 77 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~-~~------- 143 (180)
T cd06423 77 AKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQ---AIEYL--SIFRLG-RR------- 143 (180)
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccc---hheec--ceeeee-ee-------
Confidence 9999999999999999999999966665544 4666665544333210000000 00000 000000 00
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchh
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGEN 402 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED 402 (605)
........+.+.|++++++|++|+++||||+.+. +||
T Consensus 144 --~~~~~~~~~~~~g~~~~~~~~~~~~~ggf~~~~~---~eD 180 (180)
T cd06423 144 --AQSALGGVLVLSGAFGAFRREALREVGGWDEDTL---TED 180 (180)
T ss_pred --hhheecceeecCchHHHHHHHHHHHhCCccccCc---CCC
Confidence 0001122346788899999999999999999875 465
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the |
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-19 Score=169.82 Aligned_cols=179 Identities=22% Similarity=0.161 Sum_probs=128.5
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCC-CCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~-~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
||||+||++ ..+.+++.++..+.. ....+|||||||||+|++ .+.++++.++.+ +++++...+|.|.++|+|.|++
T Consensus 1 viIp~~n~~-~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t-~~~~~~~~~~~~-~i~~i~~~~n~G~~~a~n~g~~ 77 (181)
T cd04187 1 IVVPVYNEE-ENLPELYERLKAVLESLGYDYEIIFVDDGSTDRT-LEILRELAARDP-RVKVIRLSRNFGQQAALLAGLD 77 (181)
T ss_pred CEEeecCch-hhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccH-HHHHHHHHhhCC-CEEEEEecCCCCcHHHHHHHHH
Confidence 699999999 888888888766542 122379999999999985 447788877777 8999999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
.|+|+|++|+|+|+.+.++||+.+++.+..+.. ++.+....... .. . .....+ .......
T Consensus 78 ~a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~-~v~g~~~~~~~-------~~-~-~~~~~~---------~~~~~~~- 137 (181)
T cd04187 78 HARGDAVITMDADLQDPPELIPEMLAKWEEGYD-VVYGVRKNRKE-------SW-L-KRLTSK---------LFYRLIN- 137 (181)
T ss_pred hcCCCEEEEEeCCCCCCHHHHHHHHHHHhCCCc-EEEEEecCCcc-------hH-H-HHHHHH---------HHHHHHH-
Confidence 999999999999999999999999999665544 44433211100 00 0 000000 0000000
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHH
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFR 408 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~R 408 (605)
.....+.+...+++++++|++|+++|+||+.+.. ..+++++++
T Consensus 138 ---~~~~~~~~~~~~~~~~~~r~~~~~i~~~d~~~~~--~~~~~~~~~ 180 (181)
T cd04187 138 ---KLSGVDIPDNGGDFRLMDRKVVDALLLLPERHRF--LRGLIAWVG 180 (181)
T ss_pred ---HHcCCCCCCCCCCEEEEcHHHHHHHHhcCCCCcc--HHHHHHHhc
Confidence 0011234567788999999999999999999873 677776653
|
A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. |
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=173.89 Aligned_cols=191 Identities=12% Similarity=0.094 Sum_probs=130.2
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCC--------CCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC---
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPR--------SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG--- 270 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~--------~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G--- 270 (605)
||||+|||+...|.++|+|+++|+++ ...+|||||||||+|.. ..+...
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~~--------------------~gk~~~~~~ 60 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKKN--------------------RGKRDSQLW 60 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccccc--------------------CcchHHHHH
Confidence 79999999536899999999999998 44589999999999810 001011
Q ss_pred hHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCC-eeEEecccccceeeeeccceee
Q psy10463 271 LIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDV-TFAYVRSFELHWGAFNWELHFR 348 (605)
Q Consensus 271 ~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~-~~~~~~~~~~~~g~~~~~l~~~ 348 (605)
+..+.|.|+..|+||||+++|+|+.++|+||+.+++.+..++. ++|++.+...+.. ++. .....+.+....
T Consensus 61 ~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~------~~~q~~ey~~~~- 133 (244)
T cd04190 61 FFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPL------VMYQVFEYAISH- 133 (244)
T ss_pred HHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhH------HHhHheehhhhh-
Confidence 1246788999999999999999999999999999999976554 5666665433321 110 000001110000
Q ss_pred EeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCccc----------c-------cccchhhHHHHHHHH
Q psy10463 349 WYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEM----------Q-------VWGGENLEMSFRVWQ 411 (605)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~----------~-------~~g~ED~dl~~Rl~~ 411 (605)
+.. .... . ..-.+..+.|+++++|++.+.++|++...+ . ..-+||.+|++|+..
T Consensus 134 ~~~---~~~~----s--~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~ 204 (244)
T cd04190 134 WLD---KAFE----S--VFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLK 204 (244)
T ss_pred hhc---ccHH----H--cCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhc
Confidence 000 0000 0 001134678899999999999998765421 0 113799999999999
Q ss_pred cCCeEEE--ecceEEEEEc
Q psy10463 412 CGGSIEI--APCSHVAHLF 428 (605)
Q Consensus 412 ~G~~i~~--~p~s~v~H~~ 428 (605)
.|+++.+ .|.+.++...
T Consensus 205 ~G~~~~~~~~~~a~~~~~~ 223 (244)
T cd04190 205 AGPKRKYLYVPGAVAETDV 223 (244)
T ss_pred cCCccEEEEecccEEEEEC
Confidence 9999999 9999887654
|
Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified. |
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.4e-19 Score=167.09 Aligned_cols=178 Identities=21% Similarity=0.181 Sum_probs=117.7
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||++ +.+.++|+++.+|+++...+|||||||+|+|++.+ .++ .+...+.....+.+.|.+.|+|.|++.
T Consensus 1 VvIp~~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~-~~~----~~~~~~~~~~~~~~~gk~~aln~g~~~ 74 (183)
T cd06438 1 ILIPAHNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQ-VAR----AAGATVLERHDPERRGKGYALDFGFRH 74 (183)
T ss_pred CEEeccchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHH-HHH----HcCCeEEEeCCCCCCCHHHHHHHHHHH
Confidence 699999999 99999999999998864458999999999998543 333 333244444556788999999999987
Q ss_pred c-----cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 282 A-----EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 282 A-----~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
+ ++|+|+|+|+|+.++|+||..++..+.++...+.+... ..+... .. . .....+. +. .....
T Consensus 75 a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~~~~v~g~~~-~~~~~~-----~~-~-~~~~~~~--~~---~~~~~ 141 (183)
T cd06438 75 LLNLADDPDAVVVFDADNLVDPNALEELNARFAAGARVVQAYYN-SKNPDD-----SW-I-TRLYAFA--FL---VFNRL 141 (183)
T ss_pred HHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhhCCCeeEEEEe-eeCCcc-----CH-H-HHHHHHH--HH---HHHHH
Confidence 6 49999999999999999999999999876654444221 111100 00 0 0000000 00 00000
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHH
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEM 405 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl 405 (605)
......... ......|+++++||++|++ |||++... .||+||
T Consensus 142 ~~~~~~~~~---~~~~~~G~~~~~rr~~l~~-~g~~~~~l---~ED~~~ 183 (183)
T cd06438 142 RPLGRSNLG---LSCQLGGTGMCFPWAVLRQ-APWAAHSL---TEDLEF 183 (183)
T ss_pred HHHHHHHcC---CCeeecCchhhhHHHHHHh-CCCCCCCc---ccccCC
Confidence 000000000 1123568888999999999 88987543 699875
|
The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier. |
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.9e-17 Score=170.36 Aligned_cols=209 Identities=16% Similarity=0.142 Sum_probs=139.4
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCC------CCCceeEEEeeCCCChHHHHHHHHHHHHHC---CCCEEEEeC
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSP------RSMLKEILLVDDASTREFLKSSLDEYVAKL---SVPTRVIRS 265 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~------~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~---~~~v~~i~~ 265 (605)
...|.+|||||+||++ ..+.++|+++.++.. +...+|||||||||+|++. +.++++.+.. ..+++++..
T Consensus 67 ~~~~~isVVIP~yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~-~i~~~~~~~~~~~~~~i~vi~~ 144 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTL-KVAKDFWRQNINPNIDIRLLSL 144 (333)
T ss_pred CCCeEEEEEEeeCCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchH-HHHHHHHHhcCCCCCcEEEEEc
Confidence 4578899999999999 999999999876421 1223799999999999854 4677777654 126999999
Q ss_pred CCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc---CCcEEEeeeEeeecCCeeEEecccccceeeee
Q psy10463 266 PGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE---DRTRVVCPVIDIISDVTFAYVRSFELHWGAFN 342 (605)
Q Consensus 266 ~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~---~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~ 342 (605)
+.|.|.+.|+|.|++.|+|++|+++|+|...++++++.+++.+.+ +..++|.+......... .......+.
T Consensus 145 ~~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~------~~~~~~~~r 218 (333)
T PTZ00260 145 LRNKGKGGAVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSD------VVAKRKWYR 218 (333)
T ss_pred CCCCChHHHHHHHHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCc------ccccCcHHH
Confidence 999999999999999999999999999999999999999998864 44444443321110000 000000000
Q ss_pred ccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecce
Q psy10463 343 WELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCS 422 (605)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s 422 (605)
+.....-........ .........|..+++|++++.+= .......| .-|.|+..++...|.++..+|-.
T Consensus 219 -----~~~~~~~~~l~~~~~----~~~i~D~~~Gfk~~~r~~~~~i~-~~~~~~~~-~fd~Ell~~a~~~g~~I~EvPv~ 287 (333)
T PTZ00260 219 -----NILMYGFHFIVNTIC----GTNLKDTQCGFKLFTRETARIIF-PSLHLERW-AFDIEIVMIAQKLNLPIAEVPVN 287 (333)
T ss_pred -----HHHHHHHHHHHHHHc----CCCcccCCCCeEEEeHHHHHHHh-hhccccCc-cchHHHHHHHHHcCCCEEEEcee
Confidence 000000000000000 01122234456789999998871 11122233 35899999999999999999974
|
|
| >KOG2978|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-17 Score=145.45 Aligned_cols=212 Identities=17% Similarity=0.230 Sum_probs=156.5
Q ss_pred CCcceEEEEeechhhHHHH---HHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCChH
Q psy10463 197 LPKSSIVIVFHNEAWSALL---RTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLI 272 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~---~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~~ 272 (605)
.++.|||+|+|||. ..|. +.+.....+.... +|||+|||+|.|++.+ .++++++.++ .+|.+.......|++
T Consensus 2 ~~kYsvilPtYnEk-~Nlpi~~~li~~~~~e~~~~--~eiIivDD~SpDGt~~-~a~~L~k~yg~d~i~l~pR~~klGLg 77 (238)
T KOG2978|consen 2 SIKYSVILPTYNEK-ENLPIITRLIAKYMSEEGKK--YEIIIVDDASPDGTQE-VAKALQKIYGEDNILLKPRTKKLGLG 77 (238)
T ss_pred CcceeEEeccccCC-CCCeeeHHHHHhhhhhhcCc--eEEEEEeCCCCCccHH-HHHHHHHHhCCCcEEEEeccCcccch
Confidence 46789999999998 6554 4444445444444 8999999999999544 6777776554 478888888889999
Q ss_pred HHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 273 KARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 273 ~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
.|.-.|+++|+|+|++.||+|...+|.++.++++..+++.-++|.+. .|.++ .|...|.+..+....
T Consensus 78 tAy~hgl~~a~g~fiviMDaDlsHhPk~ipe~i~lq~~~~~div~GT---------RYa~~----ggV~gW~mkRk~IS~ 144 (238)
T KOG2978|consen 78 TAYIHGLKHATGDFIVIMDADLSHHPKFIPEFIRLQKEGNYDIVLGT---------RYAGG----GGVYGWDMKRKIISR 144 (238)
T ss_pred HHHHhhhhhccCCeEEEEeCccCCCchhHHHHHHHhhccCcceeeee---------eEcCC----CceecchhhHHHHhh
Confidence 99999999999999999999999999999999999998875554432 34332 445668888777777
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
+...+.....+ ..+..++|++-+.+|++.+.+-. +-.-.+| -=..|+..|+.+.|+.|--+|-+.+...+..+
T Consensus 145 gAn~la~~ll~----~~~sdltGsFrLykk~vl~~li~-e~vSkGy-vfqmEll~ra~~~~y~IgEvPitFvdR~~GeS 217 (238)
T KOG2978|consen 145 GANFLARILLN----PGVSDLTGSFRLYKKEVLEKLIE-ESVSKGY-VFQMELLARARQHGYTIGEVPITFVDRTYGES 217 (238)
T ss_pred hhHHHHHHhcc----CCCccCcceeeeehHHHHHhhHH-Hhhccch-hhhHHHHHhccccCceEeecceEEEeeccccc
Confidence 76665543221 22456788888888888876521 0001111 23689999999999999999998887666443
|
|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.7e-17 Score=160.13 Aligned_cols=206 Identities=14% Similarity=0.064 Sum_probs=134.8
Q ss_pred ceEEEEeechhhHHHHHHHHHHHh----cCC-CCCceeEEEeeCCCChHHHH---HHHHHHHHHCC--CCEEEEeCCCCC
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVIS----RSP-RSMLKEILLVDDASTREFLK---SSLDEYVAKLS--VPTRVIRSPGRV 269 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~----q~~-~~~~~eIIvVDd~S~d~~~~---~~l~~~~~~~~--~~v~~i~~~~n~ 269 (605)
|||+||+||++...+.++|.+..+ |.+ +. +||+++||++++.... ..+.+++++++ .++++++.+++.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCC
Confidence 699999999995558899988775 554 44 8999999998764321 12334544443 368999999988
Q ss_pred ChHHH-HHHHHhh--ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccc
Q psy10463 270 GLIKA-RLLGARQ--AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWEL 345 (605)
Q Consensus 270 G~~~a-rN~G~~~--A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l 345 (605)
|...+ .|.++.. +++|||+++|+|..+.|++|..++..+..++. ++|.......+.+++..
T Consensus 79 g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~~~~~--------------- 143 (254)
T cd04191 79 GRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAETLFA--------------- 143 (254)
T ss_pred CccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCCCHHH---------------
Confidence 87444 4445544 68899999999999999999999999986554 55543332333222100
Q ss_pred eeeEeecCchhHhh--hccCCCCccccccccceEEEEeHHHHhHhCCCCc--ccccc----cchhhHHHHHHHHcCCeEE
Q psy10463 346 HFRWYTYGSSDAII--KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDE--EMQVW----GGENLEMSFRVWQCGGSIE 417 (605)
Q Consensus 346 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe--~~~~~----g~ED~dl~~Rl~~~G~~i~ 417 (605)
++.......... .............+.|.++++||+.|+++|++.+ ++..| -.||+++++++...|+++.
T Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~ 221 (254)
T cd04191 144 --RLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVR 221 (254)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEE
Confidence 000000000000 0000000001234678999999999999766542 22222 2699999999999999999
Q ss_pred EecceEE
Q psy10463 418 IAPCSHV 424 (605)
Q Consensus 418 ~~p~s~v 424 (605)
+.|.+..
T Consensus 222 ~~~~~~~ 228 (254)
T cd04191 222 LAPDLEG 228 (254)
T ss_pred EccCCcc
Confidence 9998753
|
Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane. |
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-17 Score=172.00 Aligned_cols=97 Identities=26% Similarity=0.322 Sum_probs=86.7
Q ss_pred CCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHH
Q psy10463 88 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 167 (605)
Q Consensus 88 ~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~ 167 (605)
..|.+|||||+||++ ++|.+||+|+++|++++ +|||||||||+|+|. ++++++.++. ++++++.. +|.|.+.|+
T Consensus 4 ~~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~-~i~~~~~~~~-~~i~vi~~-~n~G~~~ar 77 (328)
T PRK10073 4 STPKLSIIIPLYNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSV-EIAKHYAENY-PHVRLLHQ-ANAGVSVAR 77 (328)
T ss_pred CCCeEEEEEeccCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHH-HHHHHHHhhC-CCEEEEEC-CCCChHHHH
Confidence 468999999999999 99999999999999987 799999999999984 5677776655 46888875 589999999
Q ss_pred HHHhhhccCceEEEecCcccccc
Q psy10463 168 LLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 168 n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
|.|++.|+|+|++|+|+|+...+
T Consensus 78 N~gl~~a~g~yi~flD~DD~~~p 100 (328)
T PRK10073 78 NTGLAVATGKYVAFPDADDVVYP 100 (328)
T ss_pred HHHHHhCCCCEEEEECCCCccCh
Confidence 99999999999999999998764
|
|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-17 Score=165.51 Aligned_cols=98 Identities=27% Similarity=0.274 Sum_probs=87.0
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~~~ 165 (605)
...|.+|||||+||++ ++|.+||+|+++|++++ +|||||||||++. +.+.++++.. .+++++++++.|.|.+.
T Consensus 2 ~~~p~VSVIip~yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~~---~~~~~~~~~~~~~ri~~i~~~~n~G~~~ 75 (279)
T PRK10018 2 KDNPLISIYMPTWNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTSW---EQLQQYVTALNDPRITYIHNDINSGACA 75 (279)
T ss_pred CCCCEEEEEEEeCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCH---HHHHHHHHHcCCCCEEEEECCCCCCHHH
Confidence 3579999999999999 99999999999999988 8999999999963 3356666653 45799999999999999
Q ss_pred HHHHHhhhccCceEEEecCcccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
|+|.|+..|+|+|++|+|+|+.+.+
T Consensus 76 a~N~gi~~a~g~~I~~lDaDD~~~p 100 (279)
T PRK10018 76 VRNQAIMLAQGEYITGIDDDDEWTP 100 (279)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCc
Confidence 9999999999999999999998764
|
|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=170.74 Aligned_cols=207 Identities=16% Similarity=0.108 Sum_probs=139.2
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhc-CCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCCh
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISR-SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 271 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q-~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~ 271 (605)
...|.++|+||+|||+ ..+.++|++++.+ .++. +||+|+||+|+|++.. .++++.+++| +++++..+. ..|.
T Consensus 63 ~~~p~vaIlIPA~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~-~v~~l~~~~p-~v~~vv~~~~gp~~K 137 (504)
T PRK14716 63 VPEKRIAIFVPAWREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLR-EVDRLAARYP-RVHLVIVPHDGPTSK 137 (504)
T ss_pred CCCCceEEEEeccCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHH-HHHHHHHHCC-CeEEEEeCCCCCCCH
Confidence 3489999999999999 9999999997654 5765 7999999999988544 7888888888 677555433 3458
Q ss_pred HHHHHHHHhhc------cC---CEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeee
Q psy10463 272 IKARLLGARQA------EG---EILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFN 342 (605)
Q Consensus 272 ~~arN~G~~~A------~g---d~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~ 342 (605)
+.|.|.|++.+ +| |+|+++|+|+.++|++|..+...+ .+...+..|.... +.... ....+.+.
T Consensus 138 a~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~-~~~~~VQ~pv~~~-~~~~~------~~~ag~y~ 209 (504)
T PRK14716 138 ADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL-PRHDFVQLPVFSL-PRDWG------EWVAGTYM 209 (504)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc-CCCCEEecceecc-CCchh------HHHHHHHH
Confidence 88999998654 56 999999999999999998765544 3333333444311 11000 00001000
Q ss_pred ccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh-----CC-CCcccccccchhhHHHHHHHHcCCeE
Q psy10463 343 WELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI-----GA-YDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i-----Gg-fDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
.+ |. ......... ...... .....|.++++||+.++++ |+ ||++.- .||+|+++|+.+.|+++
T Consensus 210 ~e--f~--~~~~~~l~~-r~~LG~---~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv 278 (504)
T PRK14716 210 DE--FA--ESHLKDLPV-REALGG---LIPSAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQ 278 (504)
T ss_pred HH--HH--HHHHHHHHH-HHhcCC---ccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEE
Confidence 00 00 000000000 000011 1124688999999999998 33 998853 79999999999999999
Q ss_pred EEecceEEE
Q psy10463 417 EIAPCSHVA 425 (605)
Q Consensus 417 ~~~p~s~v~ 425 (605)
.+.|.+..+
T Consensus 279 ~y~p~ai~~ 287 (504)
T PRK14716 279 IFVRVRADD 287 (504)
T ss_pred EEecccccc
Confidence 999988543
|
|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-17 Score=156.05 Aligned_cols=112 Identities=20% Similarity=0.210 Sum_probs=90.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC---CCCChHHHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP---GRVGLIKARLLG 278 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~---~n~G~~~arN~G 278 (605)
||||+||++ +.|.++|+|+++|+ +. +|||||||+|+|.+.. .++ +....+ ++++++.. .+.|.+.|+|.|
T Consensus 1 ViIp~~Ne~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~-~~~-~~~~~~-~v~~i~~~~~~~~~Gk~~aln~g 73 (191)
T cd06436 1 VLVPCLNEE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAG-IVR-LAITDS-RVHLLRRHLPNARTGKGDALNAA 73 (191)
T ss_pred CEEeccccH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHH-HHh-heecCC-cEEEEeccCCcCCCCHHHHHHHH
Confidence 699999999 99999999999998 44 7999999999998544 454 322334 78888753 568999999999
Q ss_pred Hhhcc-----------CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeE
Q psy10463 279 ARQAE-----------GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVI 320 (605)
Q Consensus 279 ~~~A~-----------gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i 320 (605)
++.++ +++|+|+|+|+.++|+||+.+...+......++++.+
T Consensus 74 ~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~ 126 (191)
T cd06436 74 YDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFSDPRVAGTQSRV 126 (191)
T ss_pred HHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhcCCceEEEeeeE
Confidence 99875 3799999999999999999988877654445555443
|
N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase. |
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.1e-17 Score=165.71 Aligned_cols=205 Identities=18% Similarity=0.176 Sum_probs=128.2
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEE-eCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVI-RSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i-~~~~n~G~~~a 274 (605)
..|++|||||+||++ ..|.++|.++.++.......|||||||||+|++.+ .++++..+.-...+++ ..+.|.|.+.|
T Consensus 29 ~~~~vSVVIPayNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~-ia~~~~~~v~~~~~~~~~~~~n~Gkg~A 106 (306)
T PRK13915 29 AGRTVSVVLPALNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAE-RAAAAGARVVSREEILPELPPRPGKGEA 106 (306)
T ss_pred CCCCEEEEEecCCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHH-HHHHhcchhhcchhhhhccccCCCHHHH
Confidence 478999999999999 99999999999886422236999999999998544 4554432211011222 24678999999
Q ss_pred HHHHHhhccCCEEEEecCCcc-cCcChHHHHHHHHHcC-CcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 275 RLLGARQAEGEILVFLDAHCE-CTLGWLENLVARVAED-RTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~-~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
+|.|+..|+||+|+|+|+|+. ++|+||+.+++.+..+ ...++.+..... ...........++....+ .
T Consensus 107 ~~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~----~~~~~~~~~~~~gr~~~~------~ 176 (306)
T PRK13915 107 LWRSLAATTGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRP----LRVSGGVDATGGGRVTEL------V 176 (306)
T ss_pred HHHHHHhcCCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccc----cccccccCcCCCCchHHH------H
Confidence 999999999999999999997 8999999999998744 445555431100 000000000000000000 0
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHH-cCC-eEEEec
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQ-CGG-SIEIAP 420 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~-~G~-~i~~~p 420 (605)
........... ...+. ...+|.++++|++++++. |++++ +.+.++...+.. .|. ++..++
T Consensus 177 ~~~l~~~~~~~-l~~i~--dp~sG~~a~rr~~l~~l~-~~~~y----g~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 177 ARPLLNLLRPE-LAGFV--QPLGGEYAGRRELLESLP-FVPGY----GVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred HHHHHHHHHHh-hhccc--CcchHhHHHHHHHHHhCC-CCCCC----eehHHHHHHHHHHhCcCceEEEE
Confidence 00000000000 00111 123456889999999985 66543 458889998874 686 666665
|
|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.1e-17 Score=165.46 Aligned_cols=101 Identities=54% Similarity=0.838 Sum_probs=90.1
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++.+.|.+||+|+++|+++...+|||||||||+|+|...+.+.......+.+++++++.|.|++.|+|.|++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~ 80 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR 80 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence 79999999987999999999999998876579999999999999776555344455667999999999999999999999
Q ss_pred hccCceEEEecCccccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~~~ 193 (605)
.|+|+|++|||+|+++.+.|+
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL 101 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWL 101 (299)
T ss_pred HccCCEEEEEeCCcccCccHH
Confidence 999999999999999987775
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. |
| >KOG3738|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-17 Score=165.33 Aligned_cols=345 Identities=21% Similarity=0.310 Sum_probs=194.9
Q ss_pred CeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCC--C
Q psy10463 151 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPR--S 228 (605)
Q Consensus 151 ~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~--~ 228 (605)
+++++++.++.|+...|+.|+..|.|.++.|||+|||+..+|+++.+ +.+...+.. .
T Consensus 180 kvr~LRN~~ReGLirSRvrGAdvA~a~vltFLDSHcEvN~~WLePLL---------------------~Rvaed~trvVs 238 (559)
T KOG3738|consen 180 KVRVLRNNEREGLIRSRVRGADVAQATVLTFLDSHCEVNEGWLEPLL---------------------ERVAEDTTRVVS 238 (559)
T ss_pred eeeeecccchhhhhhhhccccccccceEEEEEecceeecchhhHHHH---------------------HHHhhcccceee
Confidence 69999999999999999999999999999999999999988875332 222222110 0
Q ss_pred CceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHH--
Q psy10463 229 MLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVA-- 306 (605)
Q Consensus 229 ~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~-- 306 (605)
.+..+|-+|+.+--+.. +++. .|+ |+-+ .-.|...-++
T Consensus 239 PiiDvIn~dnf~Y~~as----adLr---------------GGF-------------DWsL--------hF~We~~~~eqr 278 (559)
T KOG3738|consen 239 PIIDVINLDNFSYVGAS----ADLR---------------GGF-------------DWSL--------HFKWEQMQLEQR 278 (559)
T ss_pred cccccccccccccccch----hhhc---------------CCc-------------ceEE--------EEEehhcCHHHH
Confidence 11355555554432210 0110 111 1111 1122111111
Q ss_pred HHHcCCc-----EEEeeeEeeecCCeeEEecccccc---eeeeeccceeeEeecCchhHhhhccCCCCc------ccccc
Q psy10463 307 RVAEDRT-----RVVCPVIDIISDVTFAYVRSFELH---WGAFNWELHFRWYTYGSSDAIIKRKDFTEP------FKTPA 372 (605)
Q Consensus 307 ~~~~~~~-----~vv~p~i~~i~~~~~~~~~~~~~~---~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 372 (605)
.-..++. .++.+-+.+||..+|.+.+.+++. |||.+.+++|+.|.|++.....++...... +..|.
T Consensus 279 ~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~ 358 (559)
T KOG3738|consen 279 ESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPG 358 (559)
T ss_pred hhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCC
Confidence 1111222 223334568999999888776544 999999999999999988665544333222 22222
Q ss_pred ccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEE---ecceEEEEEcccCCCCCCCCCcchhhhhhHH
Q psy10463 373 MAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEI---APCSHVAHLFRKASPYSFPGGVSEVLYGNLA 449 (605)
Q Consensus 373 ~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~---~p~s~v~H~~r~~~~~~~~~~~~~~~~rn~~ 449 (605)
-+|..+ .-+.--...+|+.-|+-+| .|.++ ..|+. ++..|--.
T Consensus 359 gs~~ty---------------------~~NTkr~AEvWmDEYK~~yyaarPsAr-------~vpfg------~i~~rL~~ 404 (559)
T KOG3738|consen 359 GSGNTY---------------------IKNTKRAAEVWMDEYKNYYYAARPSAR-------RVPFG------NIYDRLEL 404 (559)
T ss_pred CCCcch---------------------hhcchHHHHHHHHHHHHHHHhcCchhh-------cCCCc------cHHHHHHH
Confidence 222222 1233334444444444222 12221 11221 12111112
Q ss_pred HHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCccc----ccccccccCCCcCCCCC-ccc----cccccc
Q psy10463 450 RVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSF----KWYLTHVWPHHFLPMDD-KFF----GRIRHV 520 (605)
Q Consensus 450 r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f----~wyl~~v~p~~~~p~~~-~~~----G~ir~~ 520 (605)
|. +.-++.||||+.+++||.. +..-.....-.||..-+|-.- .==.-.+++|+....++ .++ ++ .+.
T Consensus 405 Rk-~l~CksFkWYLenVyPeL~--ip~~~~~~~g~lrqg~~Cl~s~~~~~~~~~gl~~C~~s~~nqqwa~~~t~~~-~~~ 480 (559)
T KOG3738|consen 405 RK-KLRCKSFKWYLENVYPELR--IPFKELIATGTLRQGDNCLDSQGQNSQEALGLASCHGSGGNQQWAFLRTSTQ-LIT 480 (559)
T ss_pred Hh-hcCCcchhhhhhhcCccee--ccccccccccchhccchhhhhhhcccccCcceeecccCCCCcchhhhhhhhh-HHH
Confidence 21 1237789999999999632 111111112233444445211 10133478888776543 222 22 233
Q ss_pred cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCC-Ccc
Q psy10463 521 QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQR 599 (605)
Q Consensus 521 ~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q~ 599 (605)
..++||++... .+|.+|.|.+| ....+.|.|.-. .+......+++|||....+. ..+.+..|.... +|+
T Consensus 481 ~~elCL~v~~~-----~pg~~v~l~~C-~~~e~~q~~v~~-~~~l~h~~s~KOGd~~~~g~---~~l~~~~C~~~~~sQ~ 550 (559)
T KOG3738|consen 481 HRELCLAVGSN-----TPGSPVALVPC-GNNETKQRWVEL-GGHLLHAGSHLCLDNPLKGR---WLLEVSTCESHLVSQS 550 (559)
T ss_pred HHhhhheeecC-----CCCCeEEEEec-CCCCCceEEEec-CCchhcccccceeccccCCC---cceeecccccccccce
Confidence 47899998753 56899999999 444668999876 44444456789999875321 358899998877 999
Q ss_pred eEeCC
Q psy10463 600 WTYDK 604 (605)
Q Consensus 600 W~~~~ 604 (605)
|.|..
T Consensus 551 w~f~~ 555 (559)
T KOG3738|consen 551 WQFAL 555 (559)
T ss_pred eeeeh
Confidence 99864
|
|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-16 Score=157.55 Aligned_cols=101 Identities=17% Similarity=0.077 Sum_probs=85.0
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 169 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~ 169 (605)
|.+|||||+|||+ +.|.++|+|+++|+|++..+|||||||+|+|+|.+ +++++......+++++.+..+.|++.|+|.
T Consensus 1 p~vsIiIp~~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~-i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~ 78 (241)
T cd06427 1 PVYTILVPLYKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIA-AARALRLPSIFRVVVVPPSQPRTKPKACNY 78 (241)
T ss_pred CeEEEEEecCCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHH-HHHHhccCCCeeEEEecCCCCCchHHHHHH
Confidence 7899999999999 99999999999999986557999999999999854 355543222234666777788999999999
Q ss_pred HhhhccCceEEEecCcccccccc
Q psy10463 170 GARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 170 g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|++.|+|+|++++|+|+.+.++|
T Consensus 79 g~~~a~gd~i~~~DaD~~~~~~~ 101 (241)
T cd06427 79 ALAFARGEYVVIYDAEDAPDPDQ 101 (241)
T ss_pred HHHhcCCCEEEEEcCCCCCChHH
Confidence 99999999999999999887543
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot |
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=157.69 Aligned_cols=118 Identities=25% Similarity=0.253 Sum_probs=98.0
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHH---hcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVI---SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI 272 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~---~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~ 272 (605)
.++++|||||+|||+ +.+.++++++. ++.... +|||||||||+|++. +.++++.++.+.+++.+....|.|.+
T Consensus 4 ~~~~vSVVIP~yNE~-~~i~~~l~~l~~~~~~~~~~--~EIIvVDDgS~D~T~-~il~~~~~~~~~~v~~i~~~~n~G~~ 79 (325)
T PRK10714 4 PIKKVSVVIPVYNEQ-ESLPELIRRTTAACESLGKE--YEILLIDDGSSDNSA-EMLVEAAQAPDSHIVAILLNRNYGQH 79 (325)
T ss_pred CCCeEEEEEcccCch-hhHHHHHHHHHHHHHhCCCC--EEEEEEeCCCCCcHH-HHHHHHHhhcCCcEEEEEeCCCCCHH
Confidence 367799999999999 88888887764 455443 799999999999854 46677666544478888888899999
Q ss_pred HHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEee
Q psy10463 273 KARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 273 ~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
.|.|.|+++|+||+++++|+|+..+|++++.+++.+.++.+ +|++
T Consensus 80 ~A~~~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~~~~~D-vV~~ 124 (325)
T PRK10714 80 SAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYD-VVGT 124 (325)
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHhhCC-EEEE
Confidence 99999999999999999999999999999999999976543 4444
|
|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.1e-16 Score=148.58 Aligned_cols=100 Identities=27% Similarity=0.244 Sum_probs=89.7
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 169 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~ 169 (605)
|++|||||+||++++.|.+||+|+++|++++ +|||||||||+|++++.+++.+.... +.++++..+.+.|.+.|+|.
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~a~n~ 77 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQD-PRIKVVFREENGGISAATNS 77 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhcC-CCEEEEEcccCCCHHHHHHH
Confidence 6899999999999889999999999999887 79999999999998777777766554 46889999999999999999
Q ss_pred HhhhccCceEEEecCcccccccc
Q psy10463 170 GARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 170 g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|++.|+++|++++|+|+.+.++|
T Consensus 78 g~~~a~~d~i~~ld~D~~~~~~~ 100 (202)
T cd04184 78 ALELATGEFVALLDHDDELAPHA 100 (202)
T ss_pred HHHhhcCCEEEEECCCCcCChHH
Confidence 99999999999999999886533
|
The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-15 Score=151.51 Aligned_cols=93 Identities=20% Similarity=0.207 Sum_probs=77.8
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhc---CCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISR---SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~---~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
|++|||||+||++ +.|.+||+||..| ++.+ +|||||||||+|+|.+ +++++... .+++++..+ +.|++.|
T Consensus 1 ~~vSVIi~~yN~~-~~l~~~l~sl~~~~~~~~~~--~EiIVvDdgStD~t~~-i~~~~~~~--~~i~~i~~~-~~G~~~A 73 (248)
T PRK10063 1 MLLSVITVAFRNL-EGIVKTHASLRHLAQDPGIS--FEWIVVDGGSNDGTRE-FLENLNGI--FNLRFVSEP-DNGIYDA 73 (248)
T ss_pred CeEEEEEEeCCCH-HHHHHHHHHHHHHHhCCCCC--EEEEEEECcCcccHHH-HHHHhccc--CCEEEEECC-CCCHHHH
Confidence 6899999999999 9999999999854 3444 7999999999999843 45554322 248888765 6699999
Q ss_pred HHHHhhhccCceEEEecCccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECT 189 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~ 189 (605)
+|.|++.|+|+|++|+|+||...
T Consensus 74 ~N~Gi~~a~g~~v~~ld~DD~~~ 96 (248)
T PRK10063 74 MNKGIAMAQGRFALFLNSGDIFH 96 (248)
T ss_pred HHHHHHHcCCCEEEEEeCCcccC
Confidence 99999999999999999999775
|
|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.6e-16 Score=147.61 Aligned_cols=94 Identities=20% Similarity=0.239 Sum_probs=83.6
Q ss_pred EEEEEeecCc-hHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 93 SIVIVFHNEA-WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 93 Siiip~yN~~-~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
|||||+||++ .++|.+||+|+++|++++ +|||||||||++++..++++++.++.+ ++++.++.|.|.+.|+|.|+
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~~~--i~~i~~~~n~G~~~a~N~g~ 76 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRKLP--LKVVPLEKNRGLGKALNEGL 76 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhcCC--eEEEEcCccccHHHHHHHHH
Confidence 7999999997 259999999999999886 799999999966666777777776654 99999999999999999999
Q ss_pred hhccCceEEEecCcccccc
Q psy10463 172 RQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|+|+|++|+|+|+...+
T Consensus 77 ~~a~gd~i~~lD~Dd~~~~ 95 (201)
T cd04195 77 KHCTYDWVARMDTDDISLP 95 (201)
T ss_pred HhcCCCEEEEeCCccccCc
Confidence 9999999999999998764
|
AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-15 Score=145.68 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=83.6
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcch---HH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVGL---IK 165 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G~---~~ 165 (605)
|++|||||+||++ ..|.++|+|+++|++++ +|||||||+|+|+|. ++++++.+.++. .++++....+.|. +.
T Consensus 1 p~vsviip~~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 76 (196)
T cd02520 1 PGVSILKPLCGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAI-PVVRKLIAKYPNVDARLLIGGEKVGINPKVN 76 (196)
T ss_pred CCeEEEEecCCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHH-HHHHHHHHHCCCCcEEEEecCCcCCCCHhHH
Confidence 7899999999999 88999999999999988 899999999999985 456777776653 4677777766553 45
Q ss_pred HHHHHhhhccCceEEEecCcccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
++|.|++.++|+|++++|+|+.+++.|
T Consensus 77 ~~n~g~~~a~~d~i~~~D~D~~~~~~~ 103 (196)
T cd02520 77 NLIKGYEEARYDILVISDSDISVPPDY 103 (196)
T ss_pred HHHHHHHhCCCCEEEEECCCceEChhH
Confidence 678999999999999999999876544
|
UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. |
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-15 Score=147.54 Aligned_cols=94 Identities=19% Similarity=0.288 Sum_probs=85.2
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++ ..|.+||+|+++|+++. +|||||||||+|+|. ++++++.++.+..++++.++.+.|.+.++|.|+.
T Consensus 1 sIvIp~yn~~-~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~t~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~ 76 (214)
T cd04196 1 AVLMATYNGE-KYLREQLDSILAQTYKN--DELIISDDGSTDGTV-EIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQ 76 (214)
T ss_pred CEEEEecCcH-HHHHHHHHHHHhCcCCC--eEEEEEeCCCCCCcH-HHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHH
Confidence 7999999999 99999999999999885 899999999999984 5577777776666888999999999999999999
Q ss_pred hccCceEEEecCcccccc
Q psy10463 173 QAEGEILVFLDAHCECTL 190 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~ 190 (605)
.++|+|++++|+|+...+
T Consensus 77 ~~~g~~v~~ld~Dd~~~~ 94 (214)
T cd04196 77 AADGDYVFFCDQDDIWLP 94 (214)
T ss_pred hCCCCEEEEECCCcccCh
Confidence 999999999999997764
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-15 Score=149.28 Aligned_cols=101 Identities=25% Similarity=0.267 Sum_probs=84.1
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHh---cCCCeEEeecCCCcc-hHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LSVPTRVIRSPGRVG-LIK 165 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~G-~~~ 165 (605)
|++|||||+|||+ +.|.++|+|+++|+++....||||||| |+|+|+.. +.++.+. ...+++++...++.| .+.
T Consensus 1 p~vSViIp~yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~-~~~~~~~~~~~~~~i~~~~~~~~~G~k~~ 77 (232)
T cd06437 1 PMVTVQLPVFNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRL-AREIVEEYAAQGVNIKHVRRADRTGYKAG 77 (232)
T ss_pred CceEEEEecCCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHH-HHHHHHHHhhcCCceEEEECCCCCCCchH
Confidence 6899999999999 999999999999999876679999998 99998654 4444333 234577777777677 588
Q ss_pred HHHHHhhhccCceEEEecCccccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
|+|.|++.|+|+|++++|+|+.+.++|+
T Consensus 78 a~n~g~~~a~~~~i~~~DaD~~~~~~~l 105 (232)
T cd06437 78 ALAEGMKVAKGEYVAIFDADFVPPPDFL 105 (232)
T ss_pred HHHHHHHhCCCCEEEEEcCCCCCChHHH
Confidence 9999999999999999999998876654
|
Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we |
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=130.81 Aligned_cols=153 Identities=30% Similarity=0.403 Sum_probs=124.2
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||++|+. +.+..++.|+.++.+.. .||+++||++++.+.. .+.+...... .+..+....+.|.+.++|.|++.
T Consensus 1 iii~~~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 75 (156)
T cd00761 1 VIIPAYNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLE-ILEEYAKKDP-RVIRVINEENQGLAAARNAGLKA 75 (156)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHH-HHHHHHhcCC-CeEEEEecCCCChHHHHHHHHHH
Confidence 689999999 99999999999998644 7999999999887443 4555444322 57778888899999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+.+++++++|+|+.+.+++++.++..+..++. .++.+.
T Consensus 76 ~~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~----------------------------------------- 114 (156)
T cd00761 76 ARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP----------------------------------------- 114 (156)
T ss_pred hcCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc-----------------------------------------
Confidence 99999999999999999999998665554433 332210
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
++++++++.|.++|++++....+ +||.+++.++...|..+
T Consensus 115 ---------------~~~~~~~~~~~~~~~~~~~~~~~-~ed~~~~~~~~~~g~~~ 154 (156)
T cd00761 115 ---------------GNLLFRRELLEEIGGFDEALLSG-EEDDDFLLRLLRGGKVA 154 (156)
T ss_pred ---------------chheeeHHHHHHhCCcchHhcCC-cchHHHHHHHHhhcccc
Confidence 56789999999999999988754 89999999988877554
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als |
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.1e-15 Score=137.74 Aligned_cols=94 Identities=37% Similarity=0.488 Sum_probs=79.4
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++ +.|.++|+|++.|+... +|||||||||+|+| .++++++.+ ....++++.++.+.|++.++|.|++
T Consensus 1 Svvip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~-~~~~~~~~~-~~~~i~~i~~~~n~g~~~~~n~~~~ 75 (169)
T PF00535_consen 1 SVVIPTYNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDET-EEILEEYAE-SDPNIRYIRNPENLGFSAARNRGIK 75 (169)
T ss_dssp EEEEEESS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSH-HHHHHHHHC-CSTTEEEEEHCCCSHHHHHHHHHHH
T ss_pred CEEEEeeCCH-HHHHHHHHHHhhccCCC--EEEEEecccccccc-ccccccccc-ccccccccccccccccccccccccc
Confidence 8999999998 99999999999996655 89999999999988 455666665 4567999999999999999999999
Q ss_pred hccCceEEEecCccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~ 191 (605)
.|.++|++++|+|+...+.
T Consensus 76 ~a~~~~i~~ld~D~~~~~~ 94 (169)
T PF00535_consen 76 HAKGEYILFLDDDDIISPD 94 (169)
T ss_dssp H--SSEEEEEETTEEE-TT
T ss_pred ccceeEEEEeCCCceEcHH
Confidence 9999999999999988643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A .... |
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.7e-15 Score=147.62 Aligned_cols=104 Identities=23% Similarity=0.239 Sum_probs=86.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcC-CCeEEeecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~G~~~ 165 (605)
...|++|||||+||++ ..|..+++++..+......+|||||||||+|+|. ++++++.+..+ ..++++.++.|.|++.
T Consensus 6 ~~~~~vsVvIp~yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~-~i~~~~~~~~~~~~v~~~~~~~n~G~~~ 83 (243)
T PLN02726 6 EGAMKYSIIVPTYNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQ-DVVKQLQKVYGEDRILLRPRPGKLGLGT 83 (243)
T ss_pred CCCceEEEEEccCCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHH-HHHHHHHHhcCCCcEEEEecCCCCCHHH
Confidence 4578999999999999 9999999988765432223799999999999984 45666665554 4588899999999999
Q ss_pred HHHHHhhhccCceEEEecCcccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|+|.|++.|+|+|++++|+|+...+.|
T Consensus 84 a~n~g~~~a~g~~i~~lD~D~~~~~~~ 110 (243)
T PLN02726 84 AYIHGLKHASGDFVVIMDADLSHHPKY 110 (243)
T ss_pred HHHHHHHHcCCCEEEEEcCCCCCCHHH
Confidence 999999999999999999999876543
|
|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.5e-15 Score=158.14 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=88.9
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
+..|.+|||||+|||+ +.|.+||+|+.+|++++...|||||||||+|+|. ++++++.+.. +.++++..+.+.|++.|
T Consensus 46 ~~~P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~-~il~~~~~~~-~~v~v~~~~~~~Gka~A 122 (439)
T TIGR03111 46 GKLPDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSF-QVFCRAQNEF-PGLSLRYMNSDQGKAKA 122 (439)
T ss_pred CCCCCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHH-HHHHHHHHhC-CCeEEEEeCCCCCHHHH
Confidence 5579999999999999 9999999999999999866799999999999994 4455554444 35777777788999999
Q ss_pred HHHHhhhccCceEEEecCcccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
+|.|++.++|+|++++|+|+.+.+++
T Consensus 123 lN~gl~~s~g~~v~~~DaD~~~~~d~ 148 (439)
T TIGR03111 123 LNAAIYNSIGKYIIHIDSDGKLHKDA 148 (439)
T ss_pred HHHHHHHccCCEEEEECCCCCcChHH
Confidence 99999999999999999999886543
|
Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602). |
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-14 Score=149.39 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=86.2
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCC------ccCcceEEEEeCCCchhhHHHHHHHHHHhc---CCCeEEeec
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSP------RSMLKEILLVDDASTREFLKSSLDEYVAKL---SVPTRVIRS 157 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~------~~~~~EiivvdD~S~d~~~~~~~~~~~~~~---~~~v~~~~~ 157 (605)
...|.+|||||+|||+ ..|.++|+++.++.. +...+|||||||||+|+|.+ +++++.+.. ..+++++.+
T Consensus 67 ~~~~~isVVIP~yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~-i~~~~~~~~~~~~~~i~vi~~ 144 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLK-VAKDFWRQNINPNIDIRLLSL 144 (333)
T ss_pred CCCeEEEEEEeeCCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHH-HHHHHHHhcCCCCCcEEEEEc
Confidence 5578999999999999 999999999987532 22237999999999999954 566666653 245999999
Q ss_pred CCCcchHHHHHHHhhhccCceEEEecCcccccc
Q psy10463 158 PGRVGLIKARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 158 ~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|.|.+.|+|.|++.|+|++++++|+|+..++
T Consensus 145 ~~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~ 177 (333)
T PTZ00260 145 LRNKGKGGAVRIGMLASRGKYILMVDADGATDI 177 (333)
T ss_pred CCCCChHHHHHHHHHHccCCEEEEEeCCCCCCH
Confidence 999999999999999999999999999997754
|
|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.9e-15 Score=156.21 Aligned_cols=103 Identities=22% Similarity=0.186 Sum_probs=87.4
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcC--CCeEEeecC----CC
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS--VPTRVIRSP----GR 160 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~--~~v~~~~~~----~~ 160 (605)
...|++|||||+|||+ +.|.+||+|+++|+|+. .+|||||||+|+|+| .++++++.++.+ ++++++..+ .+
T Consensus 37 ~~~p~VSVIIpa~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T-~~i~~~~~~~~~~~~~i~vi~~~~~~~g~ 113 (384)
T TIGR03469 37 EAWPAVVAVVPARNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGT-ADIARAAARAYGRGDRLTVVSGQPLPPGW 113 (384)
T ss_pred CCCCCEEEEEecCCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcH-HHHHHHHHHhcCCCCcEEEecCCCCCCCC
Confidence 4589999999999999 99999999999999984 279999999999998 455677766554 368888753 34
Q ss_pred cchHHHHHHHhhhcc-----CceEEEecCcccccccc
Q psy10463 161 VGLIKARLLGARQAE-----GEILVFLDAHCECTLVF 192 (605)
Q Consensus 161 ~G~~~a~n~g~~~a~-----g~~i~~lD~d~~~~~~~ 192 (605)
.|+..|.|.|++.|+ +|+++|+|+|+.+.++|
T Consensus 114 ~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~ 150 (384)
T TIGR03469 114 SGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDN 150 (384)
T ss_pred cchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhH
Confidence 688999999999999 99999999999887544
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms. |
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-14 Score=145.14 Aligned_cols=101 Identities=28% Similarity=0.320 Sum_probs=88.4
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
..+|++|||||+||++ +.|.++|+|++.|+++...+|||||||+|+|+|.+ ++.++... .++++..+.+.|.+.|
T Consensus 26 ~~~~~isVvip~~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~-~~~~~~~~---~v~~i~~~~~~g~~~a 100 (251)
T cd06439 26 AYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAE-IAREYADK---GVKLLRFPERRGKAAA 100 (251)
T ss_pred CCCCEEEEEEecCCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHH-HHHHHhhC---cEEEEEcCCCCChHHH
Confidence 5588999999999999 99999999999999887557999999999999843 45555443 5899999999999999
Q ss_pred HHHHhhhccCceEEEecCcccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
+|.|++.+.|+|++++|+|+.+.+.|
T Consensus 101 ~n~gi~~a~~d~i~~lD~D~~~~~~~ 126 (251)
T cd06439 101 LNRALALATGEIVVFTDANALLDPDA 126 (251)
T ss_pred HHHHHHHcCCCEEEEEccccCcCHHH
Confidence 99999999999999999999876433
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. |
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-14 Score=141.54 Aligned_cols=101 Identities=25% Similarity=0.253 Sum_probs=88.9
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
++|||||+||++ ..|.+||+|+..++ .|||||||||+|++. ++++ .+ +++++.. .+.|++.++|.|
T Consensus 1 ~isvii~~~Ne~-~~l~~~l~sl~~~~-----~eiivvD~gStD~t~-~i~~----~~--~~~v~~~-~~~g~~~~~n~~ 66 (229)
T cd02511 1 TLSVVIITKNEE-RNIERCLESVKWAV-----DEIIVVDSGSTDRTV-EIAK----EY--GAKVYQR-WWDGFGAQRNFA 66 (229)
T ss_pred CEEEEEEeCCcH-HHHHHHHHHHhccc-----CEEEEEeCCCCccHH-HHHH----Hc--CCEEEEC-CCCChHHHHHHH
Confidence 489999999999 99999999998774 399999999999853 3444 22 5788877 889999999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
+..|+++||+++|+|..++|++++.+++.+.+++.
T Consensus 67 ~~~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~ 101 (229)
T cd02511 67 LELATNDWVLSLDADERLTPELADEILALLATDDY 101 (229)
T ss_pred HHhCCCCEEEEEeCCcCcCHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999988764
|
UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. |
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.8e-15 Score=143.52 Aligned_cols=95 Identities=25% Similarity=0.278 Sum_probs=80.5
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEee----cCCCcchHHHHH
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIR----SPGRVGLIKARL 168 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~----~~~~~G~~~a~n 168 (605)
||||+||++ ++|.+||+|+++|+++. .+|||||||||+|+|. ++++++.++... +++++. .+.+.|.+.|+|
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N 77 (219)
T cd06913 1 IILPVHNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSA-EIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKN 77 (219)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHH-HHHHHHHHhCcccCeEEEEecccCCCCccHHHHHH
Confidence 799999999 99999999999999873 2799999999999984 567777766533 567664 345689999999
Q ss_pred HHhhhccCceEEEecCccccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~~ 191 (605)
.|++.|+|+|++|+|+|+...+.
T Consensus 78 ~g~~~a~gd~i~~lD~D~~~~~~ 100 (219)
T cd06913 78 QAIAQSSGRYLCFLDSDDVMMPQ 100 (219)
T ss_pred HHHHhcCCCEEEEECCCccCChh
Confidence 99999999999999999987643
|
This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified. |
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-14 Score=143.87 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=86.0
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcch-HHHHHHHh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL-IKARLLGA 171 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~-~~a~n~g~ 171 (605)
|||||+|||+.+.|.++|+|+.+|++++ +|||||||+|+|+|...+++++.++.+.+++++...++.|. +.|+|.|+
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~ 78 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYAL 78 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHH
Confidence 7999999998679999999999999987 79999999999999767777877777777888888877785 89999999
Q ss_pred hhcc--CceEEEecCcccccccc
Q psy10463 172 RQAE--GEILVFLDAHCECTLVF 192 (605)
Q Consensus 172 ~~a~--g~~i~~lD~d~~~~~~~ 192 (605)
+.+. ++|++++|+|+.+++.|
T Consensus 79 ~~a~~~~d~i~~lD~D~~~~~~~ 101 (236)
T cd06435 79 ERTAPDAEIIAVIDADYQVEPDW 101 (236)
T ss_pred HhcCCCCCEEEEEcCCCCcCHHH
Confidence 9986 69999999999886533
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. |
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=142.69 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=82.2
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcc-hHHHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-LIKARL 168 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G-~~~a~n 168 (605)
|.+|||||+||++.+.|.+||+|+++|++++..+|||||||||+|+|. ++++++.... .++++....+.| .++++|
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~n 77 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELR-ALAAELGVEY--GYRYLTRPDNRHAKAGNLN 77 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHH-HHHHHhhccc--CceEEEeCCCCCCcHHHHH
Confidence 789999999998757899999999999998865799999999999973 4455554333 466666666555 577899
Q ss_pred HHhhhccCceEEEecCcccccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
.|++.++|+|++++|+|+.+.+.|
T Consensus 78 ~~~~~a~~d~i~~lD~D~~~~~~~ 101 (234)
T cd06421 78 NALAHTTGDFVAILDADHVPTPDF 101 (234)
T ss_pred HHHHhCCCCEEEEEccccCcCccH
Confidence 999999999999999999887544
|
Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. |
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.9e-14 Score=157.63 Aligned_cols=205 Identities=13% Similarity=0.064 Sum_probs=139.3
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHH-hcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCCh
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 271 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~-~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~ 271 (605)
+..|.+||+||.|||+ ..+.+++++++ .++||+ +||+++++++++. +.+.++++.+++| +++++..+. +.|.
T Consensus 60 ~~~~~vsIlVPa~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~-T~~~~~~l~~~~p-~~~~v~~~~~g~~gK 134 (727)
T PRK11234 60 PDEKPLAIMVPAWNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPA-TQADVDAVCARFP-NVHKVVCARPGPTSK 134 (727)
T ss_pred CCCCCEEEEEecCcch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChh-HHHHHHHHHHHCC-CcEEEEeCCCCCCCH
Confidence 4568999999999999 99999999987 578888 7999998877665 5557888888888 777655444 7899
Q ss_pred HHHHHHHHhhc-------c--CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeee
Q psy10463 272 IKARLLGARQA-------E--GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFN 342 (605)
Q Consensus 272 ~~arN~G~~~A-------~--gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~ 342 (605)
+.|.|.|+..+ . .+++++.|+|+.++|+.|. +++.+......+-+|.. ....+.. ....+.+.
T Consensus 135 a~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l~~~~~~VQ~p~~-p~~~~~~------~~~~~~~~ 206 (727)
T PRK11234 135 ADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYLVERKDLIQIPVY-PFEREWT------HFTSGTYI 206 (727)
T ss_pred HHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhhcCCCCeEeeccc-CCCccHH------HHHHHHHH
Confidence 99999999887 3 3568889999999999998 66777655444444432 0000000 00000000
Q ss_pred ccceeeEeecCchhHhhhccCCCCccccccccceEEEE-eH--HHHhHhC---CCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 343 WELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI-DR--AYFFHIG---AYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i-~r--~~f~~iG---gfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
..|.+ ......... .....+ ...+|..+++ || +.+.++| +|+.+.- .||+|+++|+...|+++
T Consensus 207 --~EFa~-~~~~~~~~~--~~lgg~---~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v 275 (727)
T PRK11234 207 --DEFAE-LHGKDVPVR--EALAGQ---VPSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMRE 275 (727)
T ss_pred --HHHHH-HhhhhhHHH--HHcCCC---cccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEE
Confidence 01100 000000000 011111 1466778889 66 4688888 6888875 79999999999999999
Q ss_pred EEecceE
Q psy10463 417 EIAPCSH 423 (605)
Q Consensus 417 ~~~p~s~ 423 (605)
.+.|...
T Consensus 276 ~f~~~~v 282 (727)
T PRK11234 276 IFVRFPV 282 (727)
T ss_pred EEccccc
Confidence 9999544
|
|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-14 Score=148.93 Aligned_cols=99 Identities=24% Similarity=0.249 Sum_probs=83.3
Q ss_pred CCCcEEEEEEeecCchHHHHHHHHHHH---hcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchH
Q psy10463 88 FLPKSSIVIVFHNEAWSALLRTVHSVI---SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI 164 (605)
Q Consensus 88 ~~p~~Siiip~yN~~~~~l~~~l~sv~---~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~ 164 (605)
.++++|||||+|||+ +.|.++++++. .|...+ +|||||||||+|+|.+ +++++.+....+++.+....|.|.+
T Consensus 4 ~~~~vSVVIP~yNE~-~~i~~~l~~l~~~~~~~~~~--~EIIvVDDgS~D~T~~-il~~~~~~~~~~v~~i~~~~n~G~~ 79 (325)
T PRK10714 4 PIKKVSVVIPVYNEQ-ESLPELIRRTTAACESLGKE--YEILLIDDGSSDNSAE-MLVEAAQAPDSHIVAILLNRNYGQH 79 (325)
T ss_pred CCCeEEEEEcccCch-hhHHHHHHHHHHHHHhCCCC--EEEEEEeCCCCCcHHH-HHHHHHhhcCCcEEEEEeCCCCCHH
Confidence 467899999999999 99999888764 455444 7999999999999954 4556555555678888888999999
Q ss_pred HHHHHHhhhccCceEEEecCcccccc
Q psy10463 165 KARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 165 ~a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
.|.+.|++.|+||+++++|+|+..++
T Consensus 80 ~A~~~G~~~A~gd~vv~~DaD~q~~p 105 (325)
T PRK10714 80 SAIMAGFSHVTGDLIITLDADLQNPP 105 (325)
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCCH
Confidence 99999999999999999999998764
|
|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-14 Score=137.80 Aligned_cols=96 Identities=34% Similarity=0.370 Sum_probs=85.2
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 168 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n 168 (605)
+|.+|||||+||++ ..|.++|.|+++|++.+ +|||||||||+|+|.. ++.++.+.. ..+.......+.|.+.|+|
T Consensus 2 ~~~~siiip~~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~-~~~~~~~~~-~~~~~~~~~~~~g~~~~~~ 76 (291)
T COG0463 2 MPKVSVVIPTYNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE-IAIEYGAKD-VRVIRLINERNGGLGAARN 76 (291)
T ss_pred CccEEEEEeccchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH-HHHHHhhhc-ceEEEeecccCCChHHHHH
Confidence 68999999999999 99999999999999988 8999999999999844 455555444 4577788899999999999
Q ss_pred HHhhhccCceEEEecCcccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
.|+..+.|+++.++|+|+. .+
T Consensus 77 ~~~~~~~~~~~~~~d~d~~-~~ 97 (291)
T COG0463 77 AGLEYARGDYIVFLDADDQ-HP 97 (291)
T ss_pred hhHHhccCCEEEEEccCCC-CC
Confidence 9999999999999999997 64
|
|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.6e-14 Score=154.75 Aligned_cols=99 Identities=25% Similarity=0.290 Sum_probs=88.1
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
...|.+|||||+|||+ ..|.+||+|+++|+|++ +|||||||||+|+|. +.++++.++. +++++++.++|.|++.|
T Consensus 72 ~~~p~vsViIP~yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~-~~~~~~~~~~-~~v~vv~~~~n~Gka~A 146 (444)
T PRK14583 72 KGHPLVSILVPCFNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTA-QVLDALLAED-PRLRVIHLAHNQGKAIA 146 (444)
T ss_pred CCCCcEEEEEEeCCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHH-HHHHHHHHhC-CCEEEEEeCCCCCHHHH
Confidence 4578999999999999 89999999999999997 799999999999985 4456665554 46999999999999999
Q ss_pred HHHHhhhccCceEEEecCcccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
+|.|+..++||+++++|+|+.+.+
T Consensus 147 lN~gl~~a~~d~iv~lDAD~~~~~ 170 (444)
T PRK14583 147 LRMGAAAARSEYLVCIDGDALLDK 170 (444)
T ss_pred HHHHHHhCCCCEEEEECCCCCcCH
Confidence 999999999999999999998764
|
|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-14 Score=146.95 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=80.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEE-eecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRV-IRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~G~~~ 165 (605)
...|++|||||+|||+ ..|.++|+|+.+|.+....+|||||||||+|+|.+ ++.++....-....+ ..++.|.|++.
T Consensus 28 ~~~~~vSVVIPayNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~-ia~~~~~~v~~~~~~~~~~~~n~Gkg~ 105 (306)
T PRK13915 28 KAGRTVSVVLPALNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAE-RAAAAGARVVSREEILPELPPRPGKGE 105 (306)
T ss_pred cCCCCEEEEEecCCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHH-HHHHhcchhhcchhhhhccccCCCHHH
Confidence 3468999999999999 99999999999987533347999999999999854 333332111111111 22477899999
Q ss_pred HHHHHhhhccCceEEEecCccc-cccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCE-CTLVFN 193 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~-~~~~~~ 193 (605)
|.|.|+..++|++++|+|+|+. ..+.|.
T Consensus 106 A~~~g~~~a~gd~vv~lDaD~~~~~p~~l 134 (306)
T PRK13915 106 ALWRSLAATTGDIVVFVDADLINFDPMFV 134 (306)
T ss_pred HHHHHHHhcCCCEEEEEeCccccCCHHHH
Confidence 9999999999999999999996 665554
|
|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-14 Score=153.78 Aligned_cols=100 Identities=24% Similarity=0.255 Sum_probs=88.3
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
...|.+|||||+|||+ +.|.+||+|+++|++++ +|||||||||+|+|. +.++++.++. +++++++.++|.|++.|
T Consensus 51 ~~~p~vsViIp~yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~-~~l~~~~~~~-~~v~~i~~~~n~Gka~a 125 (420)
T PRK11204 51 KEYPGVSILVPCYNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTG-EILDRLAAQI-PRLRVIHLAENQGKANA 125 (420)
T ss_pred CCCCCEEEEEecCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHH-HHHHHHHHhC-CcEEEEEcCCCCCHHHH
Confidence 4578999999999999 99999999999999996 799999999999984 4455655544 46999999999999999
Q ss_pred HHHHhhhccCceEEEecCccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~ 191 (605)
+|.|++.+++|+++++|+|+.+.++
T Consensus 126 ln~g~~~a~~d~i~~lDaD~~~~~d 150 (420)
T PRK11204 126 LNTGAAAARSEYLVCIDGDALLDPD 150 (420)
T ss_pred HHHHHHHcCCCEEEEECCCCCCChh
Confidence 9999999999999999999987643
|
|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.1e-14 Score=155.30 Aligned_cols=210 Identities=13% Similarity=0.012 Sum_probs=137.2
Q ss_pred ccCCcceEEEEeechhhH----HHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHH---HHHHHHHHCC--CCEEEEeC
Q psy10463 195 EFLPKSSIVIVFHNEAWS----ALLRTVHSVISRSPRSMLKEILLVDDASTREFLKS---SLDEYVAKLS--VPTRVIRS 265 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~----~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~---~l~~~~~~~~--~~v~~i~~ 265 (605)
+..|+|+|+||+|||+.. .+..+++|+.++.++. .+||+|+||+++++.... .++++.++++ .++.+.+.
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R 199 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR 199 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 457899999999999832 5888889999887654 389999999998874321 2445566553 37888887
Q ss_pred CCCCCh-HHHHHHHHhh--ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeee
Q psy10463 266 PGRVGL-IKARLLGARQ--AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAF 341 (605)
Q Consensus 266 ~~n~G~-~~arN~G~~~--A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~ 341 (605)
..|.|. +++.|.+++. +++||++++|+|..+.+++|.+++..++.++. +++......++.+++-
T Consensus 200 ~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~slf------------ 267 (691)
T PRK05454 200 RRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGADTLF------------ 267 (691)
T ss_pred CcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCCCHH------------
Confidence 777775 3334445776 56699999999999999999999999986654 5554222122222110
Q ss_pred eccceeeEeecCchhHhh--hccCCCCccccccccceEEEEeHHHHhHhCCCCc--ccccc----cchhhHHHHHHHHcC
Q psy10463 342 NWELHFRWYTYGSSDAII--KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDE--EMQVW----GGENLEMSFRVWQCG 413 (605)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe--~~~~~----g~ED~dl~~Rl~~~G 413 (605)
. ++.......+.. ..+............|.+.++||+.|.++||+.. +...| -.||++.+.+++..|
T Consensus 268 a-----R~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~G 342 (691)
T PRK05454 268 A-----RLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAG 342 (691)
T ss_pred H-----HHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCC
Confidence 0 000000000000 0000000001224668889999999999876532 22222 258999999999999
Q ss_pred CeEEEecce
Q psy10463 414 GSIEIAPCS 422 (605)
Q Consensus 414 ~~i~~~p~s 422 (605)
+++.++|+.
T Consensus 343 yrV~~~pd~ 351 (691)
T PRK05454 343 WGVWLAPDL 351 (691)
T ss_pred CEEEEcCcc
Confidence 999999984
|
|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-14 Score=140.86 Aligned_cols=94 Identities=26% Similarity=0.340 Sum_probs=81.7
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ ..|.++|+|+.+|++ ...+|||||||||+|+|. ++++++.+..+ .+++++++.+.|++.|+|.|++.
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~-~~~~~~~~~~~-~i~~~~~~~n~G~~~a~n~g~~~ 76 (224)
T cd06442 1 IIIPTYNER-ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTA-EIVRELAKEYP-RVRLIVRPGKRGLGSAYIEGFKA 76 (224)
T ss_pred CeEeccchh-hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChH-HHHHHHHHhCC-ceEEEecCCCCChHHHHHHHHHH
Confidence 699999999 999999999999997 223899999999999984 45666655543 58999999999999999999999
Q ss_pred ccCceEEEecCccccccc
Q psy10463 174 AEGEILVFLDAHCECTLV 191 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~ 191 (605)
|.|++++|+|+|+.+.+.
T Consensus 77 a~gd~i~~lD~D~~~~~~ 94 (224)
T cd06442 77 ARGDVIVVMDADLSHPPE 94 (224)
T ss_pred cCCCEEEEEECCCCCCHH
Confidence 999999999999987643
|
Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, |
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-14 Score=140.41 Aligned_cols=95 Identities=26% Similarity=0.272 Sum_probs=82.7
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCC--ccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSP--RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~--~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
||||+||++ ..|.++|+|+++|++ +...+|||||||||+|+| .++++++.+..+..+++++++.|.|++.|+|.|+
T Consensus 1 iiip~yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t-~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~ 78 (211)
T cd04188 1 VVIPAYNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGT-AEVARKLARKNPALIRVLTLPKNRGKGGAVRAGM 78 (211)
T ss_pred CEEcccChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCch-HHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHH
Confidence 799999999 999999999999865 122389999999999998 4556777776665579999999999999999999
Q ss_pred hhccCceEEEecCcccccc
Q psy10463 172 RQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|.|+|++++|+|+...+
T Consensus 79 ~~a~gd~i~~ld~D~~~~~ 97 (211)
T cd04188 79 LAARGDYILFADADLATPF 97 (211)
T ss_pred HHhcCCEEEEEeCCCCCCH
Confidence 9999999999999998764
|
UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. |
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-14 Score=136.36 Aligned_cols=91 Identities=26% Similarity=0.283 Sum_probs=79.1
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++ +.|.+||.|+++|++++ +|||||||||+|+|. ++++++... +.++...++.|.+.|+|.|++
T Consensus 1 sivi~~~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~-~~~~~~~~~----~~~~~~~~~~g~~~a~n~~~~ 72 (202)
T cd06433 1 SIITPTYNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTV-DIIKKYEDK----ITYWISEPDKGIYDAMNKGIA 72 (202)
T ss_pred CEEEeccchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHH-HHHHHhHhh----cEEEEecCCcCHHHHHHHHHH
Confidence 7999999999 99999999999999987 899999999999984 344544332 556677889999999999999
Q ss_pred hccCceEEEecCccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~ 191 (605)
.|+++|++++|+|+.+.+.
T Consensus 73 ~a~~~~v~~ld~D~~~~~~ 91 (202)
T cd06433 73 LATGDIIGFLNSDDTLLPG 91 (202)
T ss_pred HcCCCEEEEeCCCcccCch
Confidence 9999999999999988643
|
Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.1e-14 Score=134.05 Aligned_cols=107 Identities=34% Similarity=0.321 Sum_probs=93.9
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 276 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN 276 (605)
+|++|||||+||++ ..|.++|.|+++|++.. +|||||||||+|++.. .++++....+ ++.......+.|.+.|+|
T Consensus 2 ~~~~siiip~~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~-~~~~~~~~~~-~~~~~~~~~~~g~~~~~~ 76 (291)
T COG0463 2 MPKVSVVIPTYNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE-IAIEYGAKDV-RVIRLINERNGGLGAARN 76 (291)
T ss_pred CccEEEEEeccchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH-HHHHHhhhcc-eEEEeecccCCChHHHHH
Confidence 68999999999999 99999999999999877 7999999999998544 6777766543 577777889999999999
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHH
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVA 309 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~ 309 (605)
.|+..+.|++++|+|+|+. .+..+..++....
T Consensus 77 ~~~~~~~~~~~~~~d~d~~-~~~~~~~~~~~~~ 108 (291)
T COG0463 77 AGLEYARGDYIVFLDADDQ-HPPELIPLVAAGG 108 (291)
T ss_pred hhHHhccCCEEEEEccCCC-CCHHHHHHHHHhh
Confidence 9999999999999999999 9998888555544
|
|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.5e-14 Score=148.23 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=86.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcc---
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVG--- 162 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G--- 162 (605)
...|.+|||||+|||+ +.|.+||+|+++|+|++ +||||+||+|+|.|. ++++++.++++. +++++..+.+.|
T Consensus 38 ~~~p~VSViiP~~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~-~iv~~~~~~~p~~~i~~v~~~~~~G~~~ 113 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPAL-AVVRRLRADFPDADIDLVIDARRHGPNR 113 (373)
T ss_pred CCCCCeEEEEECCCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHH-HHHHHHHHhCCCCceEEEECCCCCCCCh
Confidence 4478999999999999 99999999999999998 899999999999985 567777777654 488887776666
Q ss_pred hHHHHHHHhhhccCceEEEecCccccccccc
Q psy10463 163 LIKARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 163 ~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
+..+.+.+++.|+||+++|+|+|+.+.++|+
T Consensus 114 K~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L 144 (373)
T TIGR03472 114 KVSNLINMLPHARHDILVIADSDISVGPDYL 144 (373)
T ss_pred HHHHHHHHHHhccCCEEEEECCCCCcChhHH
Confidence 4455666789999999999999998876654
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano |
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=135.29 Aligned_cols=85 Identities=27% Similarity=0.269 Sum_probs=74.6
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 170 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g 170 (605)
++|||||+||++ ..|.+||+|+..|+ .|||||||||+|+|.+ ++++ ..++++.. .+.|++.++|.|
T Consensus 1 ~isvii~~~Ne~-~~l~~~l~sl~~~~-----~eiivvD~gStD~t~~-i~~~------~~~~v~~~-~~~g~~~~~n~~ 66 (229)
T cd02511 1 TLSVVIITKNEE-RNIERCLESVKWAV-----DEIIVVDSGSTDRTVE-IAKE------YGAKVYQR-WWDGFGAQRNFA 66 (229)
T ss_pred CEEEEEEeCCcH-HHHHHHHHHHhccc-----CEEEEEeCCCCccHHH-HHHH------cCCEEEEC-CCCChHHHHHHH
Confidence 489999999999 99999999999885 5999999999999843 2332 25788877 889999999999
Q ss_pred hhhccCceEEEecCccccc
Q psy10463 171 ARQAEGEILVFLDAHCECT 189 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~ 189 (605)
+..|+++|++++|+|+.+.
T Consensus 67 ~~~a~~d~vl~lDaD~~~~ 85 (229)
T cd02511 67 LELATNDWVLSLDADERLT 85 (229)
T ss_pred HHhCCCCEEEEEeCCcCcC
Confidence 9999999999999999876
|
UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. |
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-13 Score=129.84 Aligned_cols=96 Identities=28% Similarity=0.301 Sum_probs=80.2
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCc-cCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPR-SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~-~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
||||+||++ +.|.++|+|+..+..+ ...+|||||||||+|+|. ++++++.++.+ .++++...+|.|.+.|+|.|++
T Consensus 1 viIp~~n~~-~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~-~~~~~~~~~~~-~i~~i~~~~n~G~~~a~n~g~~ 77 (181)
T cd04187 1 IVVPVYNEE-ENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTL-EILRELAARDP-RVKVIRLSRNFGQQAALLAGLD 77 (181)
T ss_pred CEEeecCch-hhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHH-HHHHHHHhhCC-CEEEEEecCCCCcHHHHHHHHH
Confidence 699999999 9999998888766542 223799999999999984 45666655543 6899999999999999999999
Q ss_pred hccCceEEEecCcccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~~ 192 (605)
.|+|+|++++|+|+...+.|
T Consensus 78 ~a~~d~i~~~D~D~~~~~~~ 97 (181)
T cd04187 78 HARGDAVITMDADLQDPPEL 97 (181)
T ss_pred hcCCCEEEEEeCCCCCCHHH
Confidence 99999999999999886544
|
A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. |
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-13 Score=127.98 Aligned_cols=95 Identities=31% Similarity=0.348 Sum_probs=82.7
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ +.|.+||+|+++|+++. +|||||||+|+|.|.. .+.++.......+.++...++.|++.++|.|++.
T Consensus 1 Viip~~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~ 76 (180)
T cd06423 1 IIVPAYNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLE-ILEELAALYIRRVLVVRDKENGGKAGALNAGLRH 76 (180)
T ss_pred CeecccChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHH-HHHHHhccccceEEEEEecccCCchHHHHHHHHh
Confidence 699999999 99999999999999865 8999999999999854 4555555544557889999999999999999999
Q ss_pred ccCceEEEecCcccccccc
Q psy10463 174 AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~~ 192 (605)
+++++++++|+|+.+.+.|
T Consensus 77 ~~~~~i~~~D~D~~~~~~~ 95 (180)
T cd06423 77 AKGDIVVVLDADTILEPDA 95 (180)
T ss_pred cCCCEEEEECCCCCcChHH
Confidence 9999999999999876443
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the |
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-13 Score=133.95 Aligned_cols=96 Identities=26% Similarity=0.338 Sum_probs=80.5
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHh-cCCCeEEeecC--CCcchHHHHHHH
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK-LSVPTRVIRSP--GRVGLIKARLLG 170 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~-~~~~v~~~~~~--~~~G~~~a~n~g 170 (605)
||||+||++ +.|.+||+|++.|++++..+|||||||||+|+|.+ .++ +... ....++++..+ .+.|...++|.|
T Consensus 1 viip~~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~-~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g 77 (229)
T cd04192 1 VVIAARNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQ-ILE-FAAAKPNFQLKILNNSRVSISGKKNALTTA 77 (229)
T ss_pred CEEEecCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHH-HHH-HHHhCCCcceEEeeccCcccchhHHHHHHH
Confidence 799999999 99999999999999987557999999999999854 344 3333 23457888776 578999999999
Q ss_pred hhhccCceEEEecCcccccccc
Q psy10463 171 ARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
+..++++|++++|+|+.+.++|
T Consensus 78 ~~~~~~d~i~~~D~D~~~~~~~ 99 (229)
T cd04192 78 IKAAKGDWIVTTDADCVVPSNW 99 (229)
T ss_pred HHHhcCCEEEEECCCcccCHHH
Confidence 9999999999999999776543
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
Probab=99.45 E-value=3e-13 Score=127.88 Aligned_cols=95 Identities=25% Similarity=0.383 Sum_probs=77.9
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEE-eecCCCcchHHHHHHHhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRV-IRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~G~~~a~n~g~~ 172 (605)
||||+||+. +.|.+||+|+.+|++++ +|||||||+|+|.|. +.+.++.+..+.+++. .+...+.|.+.++|.|++
T Consensus 1 ivip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~ 76 (182)
T cd06420 1 LIITTYNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETK-ELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIA 76 (182)
T ss_pred CEEeecCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHH-HHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHH
Confidence 699999999 99999999999999876 799999999999984 4566665554444443 444445678899999999
Q ss_pred hccCceEEEecCcccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~~ 192 (605)
.|+|+|++++|+|+.+.+.|
T Consensus 77 ~a~g~~i~~lD~D~~~~~~~ 96 (182)
T cd06420 77 AAKGDYLIFIDGDCIPHPDF 96 (182)
T ss_pred HhcCCEEEEEcCCcccCHHH
Confidence 99999999999999876543
|
Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm |
| >PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=126.88 Aligned_cols=186 Identities=17% Similarity=0.183 Sum_probs=101.5
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
||||++..|+. .+.+|+.++.++..+. .|+|-+|+- ....+.+.|.|.|+
T Consensus 1 isiI~c~n~~~--~~~~~~~~i~~~~~~~--~~~i~i~~~--------------------------~~~~s~~~~yN~a~ 50 (217)
T PF13712_consen 1 ISIIICVNDEE--LYEECLRSIKRLIGPP--GELIEIDNV--------------------------RNAKSMAAAYNEAM 50 (217)
T ss_dssp EEEEEEES-HH--HHHHHHHHHHHTT--T--EEEEEEE-S--------------------------SS-S-TTTHHHHHG
T ss_pred CEEEEEECCHH--HHHHHHHHHHhhCCCC--ceEEEEecc--------------------------CCCcCHHHHHHHHH
Confidence 46777666664 7888999988886555 577766542 12267889999999
Q ss_pred hhccCCEEEEecCCccc-CcChHHHHHHHHHcCCc-EEEe---eeEeeecCCeeEEecccccceeeeecc-ceeeE--ee
Q psy10463 280 RQAEGEILVFLDAHCEC-TLGWLENLVARVAEDRT-RVVC---PVIDIISDVTFAYVRSFELHWGAFNWE-LHFRW--YT 351 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~-~~~~L~~ll~~~~~~~~-~vv~---p~i~~i~~~~~~~~~~~~~~~g~~~~~-l~~~~--~~ 351 (605)
++|+++|++|++.|+.+ +++|++.+++.+++++. +++| +.....++..+.- ....+. ..... ..
T Consensus 51 ~~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~~~~~~~~w~~--------~~~~g~~~~~~~~~~~ 122 (217)
T PF13712_consen 51 EKAKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKRLPPNGVWWES--------PNKVGKVREYGRIMHG 122 (217)
T ss_dssp GG--SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEESS-S-TTS-----------EEEEEETTEEEE----
T ss_pred HhCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCcCCCCCccccc--------cccccccccccccccc
Confidence 99999999999999987 68999999999966665 3333 2211111111100 000000 00000 00
Q ss_pred cCchhHhh-hccC--CCCccccccccceEEEEeHHHHhHhCCCCcc-cccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 352 YGSSDAII-KRKD--FTEPFKTPAMAGGLFAIDRAYFFHIGAYDEE-MQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 352 ~~~~~~~~-~~~~--~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~-~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
.+...... .... ...+.++.++.|.+|+++|+++ +|||. +..|-+-|+|+|++++++|+++.. +...+.|.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~~-~~~~~~H~ 197 (217)
T PF13712_consen 123 HGPNSAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVVV-PPPWCIHF 197 (217)
T ss_dssp E-------------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEEE------EE-
T ss_pred ccccccccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEEe-cCceEEEc
Confidence 01000000 0001 1245667789999999999999 99999 777888999999999999999955 44667776
Q ss_pred c
Q psy10463 428 F 428 (605)
Q Consensus 428 ~ 428 (605)
-
T Consensus 198 s 198 (217)
T PF13712_consen 198 S 198 (217)
T ss_dssp S
T ss_pred C
Confidence 4
|
|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.2e-13 Score=133.44 Aligned_cols=98 Identities=29% Similarity=0.367 Sum_probs=82.4
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 170 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g 170 (605)
++|||||+||++ +.|.++|+|+.+|+++...+|||||||+|+|+|. +.++++.+. .+.++++.++ +.|.+.|+|.|
T Consensus 1 ~~sIiip~~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~-~~~~~~~~~-~~~v~~i~~~-~~~~~~a~N~g 76 (249)
T cd02525 1 FVSIIIPVRNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTR-EIVQEYAAK-DPRIRLIDNP-KRIQSAGLNIG 76 (249)
T ss_pred CEEEEEEcCCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHH-HHHHHHHhc-CCeEEEEeCC-CCCchHHHHHH
Confidence 489999999999 9999999999999986444899999999999984 445555444 4458888765 46899999999
Q ss_pred hhhccCceEEEecCcccccccc
Q psy10463 171 ARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
++.|+++|++++|+|+.+.+.|
T Consensus 77 ~~~a~~d~v~~lD~D~~~~~~~ 98 (249)
T cd02525 77 IRNSRGDIIIRVDAHAVYPKDY 98 (249)
T ss_pred HHHhCCCEEEEECCCccCCHHH
Confidence 9999999999999999876544
|
Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. |
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-12 Score=143.88 Aligned_cols=197 Identities=14% Similarity=0.160 Sum_probs=131.9
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHH-hcCCCCCceeEEE---eeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC--
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILL---VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR-- 268 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~-~q~~~~~~~eIIv---VDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n-- 268 (605)
...|.+||+||.|||+ ..+.++|++++ +.+||. +||+| +||+.|.. .++++...+| +++++..+.+
T Consensus 68 ~~~~~vsIlVPa~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~~----~~~~~~~~~p-~~~~v~~~~~gp 139 (703)
T PRK15489 68 RDEQPLAIMVPAWKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETIT----EVERMRRRYK-RLVRVEVPHDGP 139 (703)
T ss_pred cCCCceEEEEeCCCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHHH----HHHHHhccCC-cEEEEEcCCCCC
Confidence 3468999999999999 99999999987 568886 69988 46665443 5667777777 7877766554
Q ss_pred CChHHHHHHHHhhc-------cCCE--EEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEeccccccee
Q psy10463 269 VGLIKARLLGARQA-------EGEI--LVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWG 339 (605)
Q Consensus 269 ~G~~~arN~G~~~A-------~gd~--i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g 339 (605)
.|.+.|.|.|+..+ .++| +++.|+|+.++|+.|..+ +.+..++..+.+|+....+..+ ... .+
T Consensus 140 ~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~~~~iQ~pV~~~~~~~~-~~l------~~ 211 (703)
T PRK15489 140 TCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYF-NYLLPRKDLVQLPVLSLERKWY-EWV------AG 211 (703)
T ss_pred CCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHH-HhhcCCcceeeeeeccCCCccc-cHH------HH
Confidence 78999999999875 3444 899999999999999766 5655555666666543221110 000 01
Q ss_pred eeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh---CC---CCcccccccchhhHHHHHHHHcC
Q psy10463 340 AFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI---GA---YDEEMQVWGGENLEMSFRVWQCG 413 (605)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i---Gg---fDe~~~~~g~ED~dl~~Rl~~~G 413 (605)
.+.-+ | ..........+ .....++ ..+|..++++|++++++ || ||.+.- -||.|+++|+.+.|
T Consensus 212 ~~~~E--f--a~~~~~~l~~r-~~l~~~i---pl~Gv~~~frr~aL~~l~~~gg~~~~n~~sL---TED~Dlg~RL~~~G 280 (703)
T PRK15489 212 TYMDE--F--AEWHQKDLVVR-ESLTGTV---PSAGVGTCFSRRALLALMKERGNQPFNTSSL---TEDYDFSFRLAELG 280 (703)
T ss_pred HHHHH--H--HHHhhhHHHHH-HHcCCce---eccCcceeeeHHHHHHHHHhcCCCCCCCCCc---hHhHHHHHHHHHCC
Confidence 00000 0 00001011111 1122222 25666888999998887 54 665553 69999999999999
Q ss_pred CeEEE
Q psy10463 414 GSIEI 418 (605)
Q Consensus 414 ~~i~~ 418 (605)
++..+
T Consensus 281 ~r~~f 285 (703)
T PRK15489 281 MQEIF 285 (703)
T ss_pred CceEE
Confidence 99888
|
|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.6e-13 Score=127.87 Aligned_cols=93 Identities=24% Similarity=0.190 Sum_probs=76.3
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+|||+ +.|.++|+|+.+|+++...+|||||||||+|+|.+. +++....+.+.....+.|++.|+|.|+..
T Consensus 1 VvIp~~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~-----~~~~~~~~~~~~~~~~~gk~~aln~g~~~ 74 (183)
T cd06438 1 ILIPAHNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQV-----ARAAGATVLERHDPERRGKGYALDFGFRH 74 (183)
T ss_pred CEEeccchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHH-----HHHcCCeEEEeCCCCCCCHHHHHHHHHHH
Confidence 799999999 999999999999998654579999999999998542 23333334445557788999999999998
Q ss_pred cc-----CceEEEecCcccccccc
Q psy10463 174 AE-----GEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~-----g~~i~~lD~d~~~~~~~ 192 (605)
+. +++++++|+|+.+++.|
T Consensus 75 a~~~~~~~d~v~~~DaD~~~~p~~ 98 (183)
T cd06438 75 LLNLADDPDAVVVFDADNLVDPNA 98 (183)
T ss_pred HHhcCCCCCEEEEEcCCCCCChhH
Confidence 74 99999999999887544
|
The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier. |
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.1e-13 Score=128.12 Aligned_cols=96 Identities=28% Similarity=0.284 Sum_probs=83.1
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ +.|.+||+|+.+|.++...+|||||||+|+|+| ...++++.++.+ .++++.++.|.|++.|+|.|++.
T Consensus 1 iii~~~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~-~~~~~~~~~~~~-~~~~~~~~~n~G~~~a~n~g~~~ 77 (185)
T cd04179 1 VVIPAYNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGT-AEIARELAARVP-RVRVIRLSRNFGKGAAVRAGFKA 77 (185)
T ss_pred CeecccChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCCh-HHHHHHHHHhCC-CeEEEEccCCCCccHHHHHHHHH
Confidence 699999998 999999999999987433489999999999987 455666666553 57899999999999999999999
Q ss_pred ccCceEEEecCcccccccc
Q psy10463 174 AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~~ 192 (605)
|.|+|++++|+|+...+.|
T Consensus 78 a~gd~i~~lD~D~~~~~~~ 96 (185)
T cd04179 78 ARGDIVVTMDADLQHPPED 96 (185)
T ss_pred hcCCEEEEEeCCCCCCHHH
Confidence 9999999999999876433
|
DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex |
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.4e-13 Score=150.31 Aligned_cols=106 Identities=21% Similarity=0.219 Sum_probs=87.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhH-------------HHHHHHHHHhcCCCeE
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL-------------KSSLDEYVAKLSVPTR 153 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~-------------~~~~~~~~~~~~~~v~ 153 (605)
+..|++|||||+|||+.+.+.+||.++++++|+...+||+||||||+|+|. ...++++.++. +++
T Consensus 128 ~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~--~v~ 205 (713)
T TIGR03030 128 EEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL--GVN 205 (713)
T ss_pred ccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc--CcE
Confidence 567999999999999956667899999999999655899999999999873 23444554443 588
Q ss_pred EeecCCC-cchHHHHHHHhhhccCceEEEecCcccccccccc
Q psy10463 154 VIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCECTLVFNE 194 (605)
Q Consensus 154 ~~~~~~~-~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~ 194 (605)
+++.++| .|++++.|.|++.++|||++++|+|+.+.++++.
T Consensus 206 yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~ 247 (713)
T TIGR03030 206 YITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQ 247 (713)
T ss_pred EEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHH
Confidence 8887766 4679999999999999999999999988766654
|
Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. |
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.2e-13 Score=130.81 Aligned_cols=95 Identities=19% Similarity=0.211 Sum_probs=78.2
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 170 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g 170 (605)
.+|||||+||++.+.|.+||+|+.+|+ . .|||||||+|+|++...+ .+ . ...+.++++ ...+.|+..|+|.|
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~--~--~eiivvdd~s~d~~~~~l-~~-~-~~~~~~~v~-~~~~~g~~~a~n~g 72 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK--P--LEIIVVTDGDDEPYLSIL-SQ-T-VKYGGIFVI-TVPHPGKRRALAEG 72 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC--C--CEEEEEeCCCChHHHHHH-Hh-h-ccCCcEEEE-ecCCCChHHHHHHH
Confidence 489999999998899999999999998 2 699999999999985433 11 1 122335555 46789999999999
Q ss_pred hhhccCceEEEecCccccccccc
Q psy10463 171 ARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
++.|+|++++++|+|+.+.++|+
T Consensus 73 ~~~a~~d~v~~lD~D~~~~~~~l 95 (235)
T cd06434 73 IRHVTTDIVVLLDSDTVWPPNAL 95 (235)
T ss_pred HHHhCCCEEEEECCCceeChhHH
Confidence 99999999999999998876553
|
Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. |
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.41 E-value=5e-13 Score=128.83 Aligned_cols=93 Identities=18% Similarity=0.166 Sum_probs=78.6
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ +.|.+||+|+++|+++. +|||||||||+|.|. ++++++.... +++++..++|.|.+.++|.|+..
T Consensus 1 viI~~~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~-~~~~~~~~~~--~i~~~~~~~n~g~~~~~n~~~~~ 74 (202)
T cd04185 1 AVVVTYNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTA-EWLTSLGDLD--NIVYLRLPENLGGAGGFYEGVRR 74 (202)
T ss_pred CEEEeeCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchH-HHHHHhcCCC--ceEEEECccccchhhHHHHHHHH
Confidence 699999999 99999999999999886 799999999999984 3344443322 27899999999999999999987
Q ss_pred c---cCceEEEecCcccccccc
Q psy10463 174 A---EGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a---~g~~i~~lD~d~~~~~~~ 192 (605)
| .+++++|+|+|+.+.+.|
T Consensus 75 a~~~~~d~v~~ld~D~~~~~~~ 96 (202)
T cd04185 75 AYELGYDWIWLMDDDAIPDPDA 96 (202)
T ss_pred HhccCCCEEEEeCCCCCcChHH
Confidence 6 699999999999886443
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.6e-13 Score=127.55 Aligned_cols=92 Identities=21% Similarity=0.215 Sum_probs=75.2
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeec---CCCcchHHHHHHH
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS---PGRVGLIKARLLG 170 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~---~~~~G~~~a~n~g 170 (605)
||||+|||+ +.|.+||+|+++|+ +. +|||||||+|+|.|.+. ++ + ....+++++++. ..+.|++.|+|.|
T Consensus 1 ViIp~~Ne~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~-~~-~-~~~~~~v~~i~~~~~~~~~Gk~~aln~g 73 (191)
T cd06436 1 VLVPCLNEE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGI-VR-L-AITDSRVHLLRRHLPNARTGKGDALNAA 73 (191)
T ss_pred CEEeccccH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHH-Hh-h-eecCCcEEEEeccCCcCCCCHHHHHHHH
Confidence 799999999 99999999999998 54 79999999999998543 33 2 223356888875 3578999999999
Q ss_pred hhhcc-----------CceEEEecCcccccccc
Q psy10463 171 ARQAE-----------GEILVFLDAHCECTLVF 192 (605)
Q Consensus 171 ~~~a~-----------g~~i~~lD~d~~~~~~~ 192 (605)
++.++ +++++++|+|+.+.+.|
T Consensus 74 ~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~ 106 (191)
T cd06436 74 YDQIRQILIEEGADPERVIIAVIDADGRLDPNA 106 (191)
T ss_pred HHHHhhhccccccCCCccEEEEECCCCCcCHhH
Confidence 99985 37999999999887543
|
N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase. |
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-12 Score=148.93 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=89.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC-CcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~G~~~ 165 (605)
+..|+||||||+|||+.+.+.++|.++++++|+...+||+||||||+|++ .+ .+++. .+++++.++ +.|+++
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-~~----la~~~--~v~yI~R~~n~~gKAG 329 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-RQ----FAQEV--GVKYIARPTHEHAKAG 329 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-HH----HHHHC--CcEEEEeCCCCcchHH
Confidence 45799999999999996677899999999999976689999999999997 22 33333 588887765 457899
Q ss_pred HHHHHhhhccCceEEEecCccccccccccc------cCCcceEEE
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVFNEE------FLPKSSIVI 204 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~------~~p~vSVII 204 (605)
+.|.|++.++|||++++|+|+.+.++++.. ..|++.+|-
T Consensus 330 nLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQ 374 (852)
T PRK11498 330 NINNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQ 374 (852)
T ss_pred HHHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEE
Confidence 999999999999999999999887766542 235555554
|
|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.4e-13 Score=128.97 Aligned_cols=90 Identities=30% Similarity=0.316 Sum_probs=75.2
Q ss_pred EEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
+|||||+||++ ..|.++|+|+++|++++ +|||||||+|+|+|... +.+ ..++++. .+.|.+.|+|.|+
T Consensus 1 vsvii~~~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~-~~~------~~~~~~~--~~~g~~~a~n~g~ 68 (221)
T cd02522 1 LSIIIPTLNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAI-ARS------AGVVVIS--SPKGRARQMNAGA 68 (221)
T ss_pred CEEEEEccCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHH-Hhc------CCeEEEe--CCcCHHHHHHHHH
Confidence 69999999999 89999999999999855 79999999999998542 222 3455554 4578999999999
Q ss_pred hhccCceEEEecCccccccccc
Q psy10463 172 RQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
..|+|++++++|+|+.+.+.|.
T Consensus 69 ~~a~~~~i~~~D~D~~~~~~~l 90 (221)
T cd02522 69 AAARGDWLLFLHADTRLPPDWD 90 (221)
T ss_pred HhccCCEEEEEcCCCCCChhHH
Confidence 9999999999999998875543
|
Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >KOG2978|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-12 Score=117.40 Aligned_cols=102 Identities=22% Similarity=0.213 Sum_probs=78.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCC-ccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcchHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~-~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~~~a 166 (605)
.++-|||+|+|||. .+|.-++.-+..-.+ ....+|||||||+|.|+|.+ ..++..+-+ .++|.+.......|++.|
T Consensus 2 ~~kYsvilPtYnEk-~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~-~a~~L~k~yg~d~i~l~pR~~klGLgtA 79 (238)
T KOG2978|consen 2 SIKYSVILPTYNEK-ENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQE-VAKALQKIYGEDNILLKPRTKKLGLGTA 79 (238)
T ss_pred CcceeEEeccccCC-CCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHH-HHHHHHHHhCCCcEEEEeccCcccchHH
Confidence 35689999999999 777644444433322 12348999999999999954 344444333 456888888999999999
Q ss_pred HHHHhhhccCceEEEecCcccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
...|+..|+|+|++.+|+|...+|.+
T Consensus 80 y~hgl~~a~g~fiviMDaDlsHhPk~ 105 (238)
T KOG2978|consen 80 YIHGLKHATGDFIVIMDADLSHHPKF 105 (238)
T ss_pred HHhhhhhccCCeEEEEeCccCCCchh
Confidence 99999999999999999999887644
|
|
| >cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-11 Score=115.43 Aligned_cols=159 Identities=19% Similarity=0.292 Sum_probs=106.9
Q ss_pred cceEEEEeechhhHHHHHHHHH---HHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHS---VISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~s---l~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
+++||||.+++. +.|...+.. .+.+..-. +.|.|+..-.. ..++.+...
T Consensus 3 ~~aiivpyr~R~-~~l~~~l~~~~~~L~rq~~~--~~i~vi~Q~~~-------------------------~~FNR~~ll 54 (219)
T cd00899 3 KVAIIVPFRNRF-EHLLIFLPHLHPFLQRQQLD--YRIFVIEQVGN-------------------------FRFNRAKLL 54 (219)
T ss_pred ceEEEEecCCHH-HHHHHHHHHHHHHHHhcCCc--EEEEEEEecCC-------------------------ccchhhhhh
Confidence 689999999999 776655544 44444322 56766643211 124556667
Q ss_pred HHHHhhc----cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEee
Q psy10463 276 LLGARQA----EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 276 N~G~~~A----~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
|.|...| ..++++|-|-|..+..+++.. ...+.+.-...+. + .+
T Consensus 55 NvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y---~~~~~p~H~s~~~-~------------------~~---------- 102 (219)
T cd00899 55 NVGFLEALKDGDWDCFIFHDVDLLPENDRNLY---GCEEGPRHLSVPL-D------------------KF---------- 102 (219)
T ss_pred hHHHHHHhhcCCccEEEEecccccccCccccc---cCCCCCeEEEEee-c------------------cc----------
Confidence 8877666 357999999999988877442 1122222111110 0 00
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceE--EEEEcc
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH--VAHLFR 429 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~--v~H~~r 429 (605)
....| .+.+.||+++++|+.|.+++|||+.|.+||+||.||+.|++..|.++...+... ..|+..
T Consensus 103 -----------~~~lp--y~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H 169 (219)
T cd00899 103 -----------HYKLP--YKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRH 169 (219)
T ss_pred -----------ccccC--cccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeec
Confidence 01111 235688999999999999999999999999999999999999999999887654 445544
Q ss_pred c
Q psy10463 430 K 430 (605)
Q Consensus 430 ~ 430 (605)
.
T Consensus 170 ~ 170 (219)
T cd00899 170 I 170 (219)
T ss_pred C
Confidence 3
|
Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen. |
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.6e-12 Score=125.26 Aligned_cols=90 Identities=18% Similarity=0.191 Sum_probs=76.8
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
+|||+||++.+.|.+||+|+++|. +|||||||+|+|.+.. ..++ ....+++++.+.|.|++.|+|.|++.
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q~-----~~iivvDn~s~~~~~~--~~~~---~~~~i~~i~~~~n~G~~~a~N~g~~~ 70 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQV-----DKVVVVDNSSGNDIEL--RLRL---NSEKIELIHLGENLGIAKALNIGIKA 70 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhccC-----CEEEEEeCCCCccHHH--Hhhc---cCCcEEEEECCCceehHHhhhHHHHH
Confidence 589999999899999999999982 7999999999887632 1221 34569999999999999999999999
Q ss_pred ccC---ceEEEecCccccccccc
Q psy10463 174 AEG---EILVFLDAHCECTLVFN 193 (605)
Q Consensus 174 a~g---~~i~~lD~d~~~~~~~~ 193 (605)
|.| +|++++|+|+...+.|.
T Consensus 71 a~~~~~d~v~~lD~D~~~~~~~l 93 (237)
T cd02526 71 ALENGADYVLLFDQDSVPPPDMV 93 (237)
T ss_pred HHhCCCCEEEEECCCCCcCHhHH
Confidence 988 99999999998876554
|
Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen. |
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-12 Score=128.72 Aligned_cols=99 Identities=29% Similarity=0.382 Sum_probs=71.1
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcc---hHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVG---LIK 165 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G---~~~ 165 (605)
|.||||||+||+. ..|.++|+|++.|+++. .||+||||+|++++. +.++++.+..+. +++++..+.+.| +..
T Consensus 1 P~v~Vvip~~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~-~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~ 76 (228)
T PF13641_consen 1 PRVSVVIPAYNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETA-EILRALAARYPRVRVRVIRRPRNPGPGGKAR 76 (228)
T ss_dssp --EEEE--BSS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GC-TTHHHHHHTTGG-GEEEEE----HHHHHHHH
T ss_pred CEEEEEEEecCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHH-HHHHHHHHHcCCCceEEeecCCCCCcchHHH
Confidence 7899999999999 89999999999999866 899999999999985 346666666664 478988887665 688
Q ss_pred HHHHHhhhccCceEEEecCcccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
++|.|++.+++++++++|+|+.+.+.|
T Consensus 77 a~n~~~~~~~~d~i~~lD~D~~~~p~~ 103 (228)
T PF13641_consen 77 ALNEALAAARGDYILFLDDDTVLDPDW 103 (228)
T ss_dssp HHHHHHHH---SEEEEE-SSEEE-CHH
T ss_pred HHHHHHHhcCCCEEEEECCCcEECHHH
Confidence 999999999999999999999886533
|
|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-12 Score=116.59 Aligned_cols=90 Identities=26% Similarity=0.325 Sum_probs=77.9
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||+. +.|.++|+|+.+|+++. +|||||||||+|++...+ .+ ....++++..+.+.|++.|+|.|++.
T Consensus 1 vii~~~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~-~~----~~~~~~~~~~~~~~g~~~a~n~~~~~ 72 (166)
T cd04186 1 IIIVNYNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELL-RE----LFPEVRLIRNGENLGFGAGNNQGIRE 72 (166)
T ss_pred CEEEecCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHH-HH----hCCCeEEEecCCCcChHHHhhHHHhh
Confidence 699999997 99999999999998855 799999999999974432 22 22368899999999999999999999
Q ss_pred ccCceEEEecCccccccc
Q psy10463 174 AEGEILVFLDAHCECTLV 191 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~ 191 (605)
+.+++++|+|+|+...+.
T Consensus 73 ~~~~~i~~~D~D~~~~~~ 90 (166)
T cd04186 73 AKGDYVLLLNPDTVVEPG 90 (166)
T ss_pred CCCCEEEEECCCcEECcc
Confidence 999999999999977643
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-11 Score=134.72 Aligned_cols=102 Identities=32% Similarity=0.316 Sum_probs=89.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeec-CCCcchHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS-PGRVGLIKAR 167 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~-~~~~G~~~a~ 167 (605)
+|.+||+||+|||+.+.+.+++.|+.+|.|+. .|||||||+|+|++ .+++++...+..+.++++.. .++.|++.|.
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al 129 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDET-YEILEELGAEYGPNFRVIYPEKKNGGKAGAL 129 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhH-HHHHHHHHhhcCcceEEEeccccCccchHHH
Confidence 59999999999999669999999999999999 79999999999998 45567777776556777755 6889999999
Q ss_pred HHHhhhccCceEEEecCccccccccc
Q psy10463 168 LLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 168 n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
|.|+..++||+++++|+|..+.++++
T Consensus 130 ~~~l~~~~~d~V~~~DaD~~~~~d~l 155 (439)
T COG1215 130 NNGLKRAKGDVVVILDADTVPEPDAL 155 (439)
T ss_pred HHHHhhcCCCEEEEEcCCCCCChhHH
Confidence 99999999999999999998876554
|
|
| >KOG2977|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-11 Score=116.86 Aligned_cols=95 Identities=27% Similarity=0.283 Sum_probs=76.2
Q ss_pred cEEEEEEeecCchHHHHHH----HHHHHhc--CCccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcch
Q psy10463 91 KSSIVIVFHNEAWSALLRT----VHSVISR--SPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGL 163 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~----l~sv~~~--~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~ 163 (605)
.+|||||+|||+ ..|..+ ++++-.+ ..++.-+|||||||||+|.|++. .-++..+. .+.++|+...+|.|.
T Consensus 68 ~lsVIVpaynE~-~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~-a~k~s~K~~~d~irV~~l~~nrgK 145 (323)
T KOG2977|consen 68 YLSVIVPAYNEE-GRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEV-ALKFSRKLGDDNIRVIKLKKNRGK 145 (323)
T ss_pred eeEEEEecCCcc-cchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHH-HHHHHHHcCcceEEEeehhccCCC
Confidence 589999999998 655554 4444333 33446689999999999999664 44555444 467999999999999
Q ss_pred HHHHHHHhhhccCceEEEecCccc
Q psy10463 164 IKARLLGARQAEGEILVFLDAHCE 187 (605)
Q Consensus 164 ~~a~n~g~~~a~g~~i~~lD~d~~ 187 (605)
++|...|+-.++|++++|.|+|-.
T Consensus 146 GgAvR~g~l~~rG~~ilfadAdGa 169 (323)
T KOG2977|consen 146 GGAVRKGMLSSRGQKILFADADGA 169 (323)
T ss_pred CcceehhhHhccCceEEEEcCCCC
Confidence 999999999999999999999973
|
|
| >KOG2977|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.2e-11 Score=115.92 Aligned_cols=113 Identities=27% Similarity=0.227 Sum_probs=86.1
Q ss_pred cCCcceEEEEeechhh---HHHHHHHHHHHhcC--CCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCC
Q psy10463 196 FLPKSSIVIVFHNEAW---SALLRTVHSVISRS--PRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRV 269 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~---~~l~~~l~sl~~q~--~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~ 269 (605)
..+-+|||||.||++. ..+.+|+.++..+. .+...+|||||||||+|.+++ +.-++..++. .+++++...+|.
T Consensus 65 ~~~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~-~a~k~s~K~~~d~irV~~l~~nr 143 (323)
T KOG2977|consen 65 EKMYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVE-VALKFSRKLGDDNIRVIKLKKNR 143 (323)
T ss_pred hhceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHH-HHHHHHHHcCcceEEEeehhccC
Confidence 3457999999999982 34667777776654 334568999999999998665 4555664444 589999999999
Q ss_pred ChHHHHHHHHhhccCCEEEEecCCccc---CcChHHHHHHHHH
Q psy10463 270 GLIKARLLGARQAEGEILVFLDAHCEC---TLGWLENLVARVA 309 (605)
Q Consensus 270 G~~~arN~G~~~A~gd~i~flD~D~~~---~~~~L~~ll~~~~ 309 (605)
|.++|.-.|+.+++|++++|.|+|-.- +-..|+..+....
T Consensus 144 gKGgAvR~g~l~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 144 GKGGAVRKGMLSSRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred CCCcceehhhHhccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 999999999999999999999999763 2234444444443
|
|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=117.85 Aligned_cols=185 Identities=14% Similarity=0.170 Sum_probs=124.2
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC----C-------
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG----R------- 268 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~----n------- 268 (605)
+.|||.+||++ +.+.++|+||+++.|.....+|||.+||+.++ +.+.+..+. ..++++.+.. +
T Consensus 2 ~PVlv~ayNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~-~~~~v~~~~----~~i~~i~~~~~~~~~~~~~~~~ 75 (334)
T cd02514 2 IPVLVIACNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE-VADVAKSFG----DGVTHIQHPPISIKNVNPPHKF 75 (334)
T ss_pred cCEEEEecCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH-HHHHHHhhc----cccEEEEcccccccccCccccc
Confidence 57999999999 99999999999985444448999999999876 333444442 2566666532 2
Q ss_pred ---CChHH----HHHHHHhhccCCEEEEecCCcccCcCh---HHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccc
Q psy10463 269 ---VGLIK----ARLLGARQAEGEILVFLDAHCECTLGW---LENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELH 337 (605)
Q Consensus 269 ---~G~~~----arN~G~~~A~gd~i~flD~D~~~~~~~---L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~ 337 (605)
.++++ |+|.++..+.++++++|++|+++.|++ ++.++..++.++. ..+++-- .+
T Consensus 76 ~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~N----dn----------- 140 (334)
T cd02514 76 QGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWN----DN----------- 140 (334)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeec----cC-----------
Confidence 22344 889999888999999999999999995 5777777777765 3333211 00
Q ss_pred eeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHH--HHcCCe
Q psy10463 338 WGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRV--WQCGGS 415 (605)
Q Consensus 338 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl--~~~G~~ 415 (605)
|.. ... ...+...+++..+.|...|+.|+.|+++ ++... .-|+|+++|. .++| |
T Consensus 141 -G~~---------~~~-------~~~~~~lyrs~ff~glGWml~r~~W~e~---~~~wp---~~~WD~w~R~~~~rkg-r 196 (334)
T cd02514 141 -GKE---------HFV-------DDTPSLLYRTDFFPGLGWMLTRKLWKEL---EPKWP---KAFWDDWMRLPEQRKG-R 196 (334)
T ss_pred -Ccc---------ccc-------CCCcceEEEecCCCchHHHHHHHHHHHh---CCCCC---CCChHHhhcchhhhcC-C
Confidence 000 000 0002233456667777778999999998 66554 4599999996 3445 4
Q ss_pred EEEecc-eEEEEEcc
Q psy10463 416 IEIAPC-SHVAHLFR 429 (605)
Q Consensus 416 i~~~p~-s~v~H~~r 429 (605)
-.+.|+ ++++|..+
T Consensus 197 ~cirPeisRt~~~g~ 211 (334)
T cd02514 197 ECIRPEISRTYHFGK 211 (334)
T ss_pred ccccCCcchheeccc
Confidence 444444 56666653
|
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. |
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.6e-11 Score=118.34 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=62.4
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCc--------cCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchH-
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPR--------SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI- 164 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~--------~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~- 164 (605)
||||+|||+...|.++|+||++|+|+ ...+|||||||||+|. |.|+.
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~------------------------~~gk~~ 56 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKK------------------------NRGKRD 56 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCcccc------------------------cCcchH
Confidence 79999999757999999999999998 3347999999999991 23332
Q ss_pred ------HHHHHHhhhccCceEEEecCcccccccc
Q psy10463 165 ------KARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 165 ------~a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
.+.|.|+..|+|++++++|+|+.+.+.|
T Consensus 57 ~~~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~ 90 (244)
T cd04190 57 SQLWFFNYFCRVLFPDDPEFILLVDADTKFDPDS 90 (244)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEECCCCcCCHhH
Confidence 3568888899999999999999887543
|
Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified. |
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.1e-10 Score=113.41 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=81.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcchHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIKAR 167 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~~~a~ 167 (605)
+|.+|+||++||.. +.+.+||.|+.+|+++. .++++|||+|+|++.+. ++.. .+.++++.+.+|.|++++-
T Consensus 2 ~~~i~~iiv~yn~~-~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~-----~~~~~~~~v~~i~~~~NlG~agg~ 73 (305)
T COG1216 2 MPKISIIIVTYNRG-EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEA-----LKARFFPNVRLIENGENLGFAGGF 73 (305)
T ss_pred CcceEEEEEecCCH-HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHH-----HHhhcCCcEEEEEcCCCccchhhh
Confidence 68999999999999 99999999999999988 57778999999998543 2222 5679999999999999999
Q ss_pred HHHhhhccCc---eEEEecCccccc
Q psy10463 168 LLGARQAEGE---ILVFLDAHCECT 189 (605)
Q Consensus 168 n~g~~~a~g~---~i~~lD~d~~~~ 189 (605)
|.|++.|.++ |+++|+.|..+.
T Consensus 74 n~g~~~a~~~~~~~~l~LN~D~~~~ 98 (305)
T COG1216 74 NRGIKYALAKGDDYVLLLNPDTVVE 98 (305)
T ss_pred hHHHHHHhcCCCcEEEEEcCCeeeC
Confidence 9999999766 899999997654
|
|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.8e-10 Score=104.76 Aligned_cols=143 Identities=18% Similarity=0.271 Sum_probs=97.3
Q ss_pred EEEeCCCCCCh---HHHHHHHHhh-ccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEeccccc
Q psy10463 261 RVIRSPGRVGL---IKARLLGARQ-AEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFEL 336 (605)
Q Consensus 261 ~~i~~~~n~G~---~~arN~G~~~-A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~ 336 (605)
+++..+...|. ..+...|+++ |++|+|+|+|+|+.++|+||..|+..+.+...++|+......+.+.+
T Consensus 5 ~lvv~~~~~g~N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~-------- 76 (175)
T PF13506_consen 5 RLVVGGPPRGCNPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGF-------- 76 (175)
T ss_pred EEEECCCCCCCChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCH--------
Confidence 35555555553 4445567787 99999999999999999999999999998777777754322222211
Q ss_pred ceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 337 HWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 337 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
++... ... .......... .-..+...|++|++||+.++++|||+.--. +-.||+.|..++++.|+++
T Consensus 77 -~~~l~-~~~---~~~~~~~~~a-------~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~-~ladD~~l~~~~~~~G~~v 143 (175)
T PF13506_consen 77 -WSRLE-AAF---FNFLPGVLQA-------LGGAPFAWGGSMAFRREALEEIGGFEALAD-YLADDYALGRRLRARGYRV 143 (175)
T ss_pred -HHHHH-HHH---HhHHHHHHHH-------hcCCCceecceeeeEHHHHHHcccHHHHhh-hhhHHHHHHHHHHHCCCeE
Confidence 00000 000 0000000000 113457889999999999999999987333 3489999999999999999
Q ss_pred EEecceEE
Q psy10463 417 EIAPCSHV 424 (605)
Q Consensus 417 ~~~p~s~v 424 (605)
...|.+.+
T Consensus 144 ~~~~~~v~ 151 (175)
T PF13506_consen 144 VLSPYPVV 151 (175)
T ss_pred EEcchhee
Confidence 99997654
|
|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.3e-10 Score=116.47 Aligned_cols=84 Identities=18% Similarity=0.164 Sum_probs=70.7
Q ss_pred EeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchh-hHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhc-
Q psy10463 97 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTRE-FLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA- 174 (605)
Q Consensus 97 p~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~-~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a- 174 (605)
.+||++.+.|.+||+|+++|+ +|||||||||++. +++ +..+. .+.++++++++|.|++.|+|.|++.|
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~~~~~----~~~~~-~~~i~~i~~~~N~G~a~a~N~Gi~~a~ 70 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV-----DRIIAVDNSPHSDQPLK----NARLR-GQKIALIHLGDNQGIAGAQNQGLDASF 70 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC-----CEEEEEECcCCCcHhHH----HHhcc-CCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 379986699999999999996 6999999999764 433 32222 35699999999999999999999998
Q ss_pred --cCceEEEecCcccccc
Q psy10463 175 --EGEILVFLDAHCECTL 190 (605)
Q Consensus 175 --~g~~i~~lD~d~~~~~ 190 (605)
.++|++++|+|+.+.+
T Consensus 71 ~~~~d~i~~lD~D~~~~~ 88 (281)
T TIGR01556 71 RRGVQGVLLLDQDSRPGN 88 (281)
T ss_pred HCCCCEEEEECCCCCCCH
Confidence 7899999999998764
|
Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids. |
| >KOG3588|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.7e-09 Score=102.99 Aligned_cols=212 Identities=18% Similarity=0.282 Sum_probs=142.2
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCC-CChHHHH-HHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDA-STREFLK-SSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~-S~d~~~~-~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
..|.+.+|+|-..+. ..+.+...++....... .+++||-=| |.++..+ +.+..+..+++ ++.++.....+.-+.
T Consensus 227 ~~pgih~i~pl~gr~-~~f~rf~q~~c~~~d~~--l~l~vv~f~~se~e~ak~e~~tslra~f~-~~q~l~lngeFSRa~ 302 (494)
T KOG3588|consen 227 EDPGIHMIMPLRGRA-AIFARFAQSICARGDDR--LALSVVYFGYSEDEMAKRETITSLRASFI-PVQFLGLNGEFSRAK 302 (494)
T ss_pred cCCCceEEEeccchH-HHhhhhhHHHhccCCCc--eEEEEEEecCCChHHHhhhHHHHHhhcCC-ceEEecccchhhhhH
Confidence 467899999999999 88888888888776655 466655444 4444333 34456667777 777766655566777
Q ss_pred HHHHHHhhccCCE-EEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 274 ARLLGARQAEGEI-LVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 274 arN~G~~~A~gd~-i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
|...|++.-..+. ++|.|-|..++.++|++.-.... ...-+..|++...-.....|..... .
T Consensus 303 aL~vGAe~~~~nvLLFfcDVDi~FT~efL~rcr~Nt~-~gkqiyfPivFS~ynp~ivy~~~~~----------------~ 365 (494)
T KOG3588|consen 303 ALMVGAETLNANVLLFFCDVDIYFTTEFLNRCRLNTI-LGKQIYFPIVFSQYNPEIVYEQDKP----------------L 365 (494)
T ss_pred HHHhhHHHhccceeEEEeccceeehHHHHHHHhhccC-CCceEEEEEEEeecCcceeecCCCC----------------C
Confidence 8889999987665 46679999999988877643322 2345666776332211122211100 1
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
+ .+........+..++ .+.-|..++-|..|..+||||..+.+||+||++|..+..+.|.++.-.|..-+.|+++..
T Consensus 366 p-~e~~~~~~~~tGfwR--dfGfGmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~~H~~ 441 (494)
T KOG3588|consen 366 P-AEQQLVIKKDTGFWR--DFGFGMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHLWHPK 441 (494)
T ss_pred c-hhHheeecccccccc--ccCCceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEeeccc
Confidence 1 111110111122222 233345567899999999999999999999999999999999999999999999998654
|
|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.9e-09 Score=108.27 Aligned_cols=94 Identities=35% Similarity=0.437 Sum_probs=70.7
Q ss_pred EEEEEeecCch-----HHHHHHHHHHHhc-CCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCC---cch
Q psy10463 93 SIVIVFHNEAW-----SALLRTVHSVISR-SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR---VGL 163 (605)
Q Consensus 93 Siiip~yN~~~-----~~l~~~l~sv~~~-~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~---~G~ 163 (605)
|||||++|... +.|..||.++..+ ..++ .|||||||||++.+. +.+.+..+... .++++..... .|.
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~--~eiIvvd~~s~~~~~-~~l~~~~~~~~-~~~~i~~~~~~~~f~~ 76 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPD--FEIIVVDDGSSDEFD-EELKKLCEKNG-FIRYIRHEDNGEPFSR 76 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCC--EEEEEEECCCchhHH-HHHHHHHhccC-ceEEEEcCCCCCCcCH
Confidence 79999999983 3566667777763 3333 799999999999863 33555555443 2336666544 499
Q ss_pred HHHHHHHhhhccCceEEEecCcccccc
Q psy10463 164 IKARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 164 ~~a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|||.|+..|++++++|+|+|+.+.+
T Consensus 77 a~arN~g~~~A~~d~l~flD~D~i~~~ 103 (281)
T PF10111_consen 77 AKARNIGAKYARGDYLIFLDADCIPSP 103 (281)
T ss_pred HHHHHHHHHHcCCCEEEEEcCCeeeCH
Confidence 999999999999999999999997753
|
|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=118.34 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=79.9
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHH-hcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC--Ccch
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 163 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~-~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~G~ 163 (605)
...|.+||+||+|||+ +.|.++|+|++ ++.|++ +||+|+||+|+|+|.+ .+++..++++ .++++..+. ..|+
T Consensus 63 ~~~p~vaIlIPA~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~-~v~~l~~~~p-~v~~vv~~~~gp~~K 137 (504)
T PRK14716 63 VPEKRIAIFVPAWREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLR-EVDRLAARYP-RVHLVIVPHDGPTSK 137 (504)
T ss_pred CCCCceEEEEeccCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHH-HHHHHHHHCC-CeEEEEeCCCCCCCH
Confidence 4478999999999999 99999999976 456876 7999999999999854 4666666664 365444333 3468
Q ss_pred HHHHHHHhhhc------cC---ceEEEecCccccccccc
Q psy10463 164 IKARLLGARQA------EG---EILVFLDAHCECTLVFN 193 (605)
Q Consensus 164 ~~a~n~g~~~a------~g---~~i~~lD~d~~~~~~~~ 193 (605)
+.|.|.|++.+ +| ++++++|+|+.+.++++
T Consensus 138 a~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~L 176 (504)
T PRK14716 138 ADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLEL 176 (504)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHH
Confidence 99999998654 56 99999999998876543
|
|
| >COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.2e-09 Score=99.51 Aligned_cols=212 Identities=16% Similarity=0.204 Sum_probs=124.3
Q ss_pred CCcceEEEEeechh-hH-HHHHHHH--HHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh-
Q psy10463 197 LPKSSIVIVFHNEA-WS-ALLRTVH--SVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL- 271 (605)
Q Consensus 197 ~p~vSVIIp~~n~~-~~-~l~~~l~--sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~- 271 (605)
+|+.++|||+-... .+ .-.|.+. ++++--.+....+||+++..+..+ ..+..+....+ ++-++.-.....+
T Consensus 1 m~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d---~~i~~~i~~~~-~~~yl~~~s~~~F~ 76 (346)
T COG4092 1 MQPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD---RLIRSYIDPMP-RVLYLDFGSPEPFA 76 (346)
T ss_pred CCCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhHH---HHHHHHhcccc-ceEEEecCCCcccc
Confidence 46789999986644 11 2233343 323322233448999998876433 45777888777 7777765554443
Q ss_pred --HHHHHHHHhhcc----CCEEEEecCCcccCcChHHHHHHHH-----HcCC-cEEEeeeEeeecCCeeEEeccccccee
Q psy10463 272 --IKARLLGARQAE----GEILVFLDAHCECTLGWLENLVARV-----AEDR-TRVVCPVIDIISDVTFAYVRSFELHWG 339 (605)
Q Consensus 272 --~~arN~G~~~A~----gd~i~flD~D~~~~~~~L~~ll~~~-----~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g 339 (605)
+..+|.|+..|. .++|+|||.||....+-.++++..+ ..+= ...|-|+.-.-...+... ..
T Consensus 77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~-------f~ 149 (346)
T COG4092 77 SETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVF-------FD 149 (346)
T ss_pred chhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHH-------HH
Confidence 567899998886 8999999999999877777776543 2221 345556542111111000 00
Q ss_pred eeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 340 AFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
.++. .|...-.+.......... .+-. ....+.++|.|..|...|||||.|.++|.||.||..|+-.. +...
T Consensus 150 ~~d~----f~d~~i~es~~~~~~~~~-~ff~-~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~---~~~~ 220 (346)
T COG4092 150 VEDM----FLDAMIFESPLAEFRKED-NFFI-APYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY---IKNL 220 (346)
T ss_pred HHHH----hhhhHhhhhHHHHhCccc-cccc-ccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH---Hhcc
Confidence 0110 000000000000011111 1111 23456889999999999999999999999999999998654 4444
Q ss_pred cceEEEEEc
Q psy10463 420 PCSHVAHLF 428 (605)
Q Consensus 420 p~s~v~H~~ 428 (605)
|.-.-.|.+
T Consensus 221 p~~~~nh~y 229 (346)
T COG4092 221 PMLTKNHLY 229 (346)
T ss_pred ccccccccc
Confidence 544444554
|
|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.2e-09 Score=102.69 Aligned_cols=125 Identities=21% Similarity=0.283 Sum_probs=80.9
Q ss_pred EEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCC
Q psy10463 286 ILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365 (605)
Q Consensus 286 ~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 365 (605)
||+++|+|+.+++++|+.+++.+.++...++.+.+...+.+++ -.....+.+... .... .. ...
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~--~~---~~~ 64 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFRNRGSL------LTRLQDFEYAIS-----HGLS--RL---SQS 64 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEecCCCCh------hheeehhhhhhh-----hhhh--HH---HHH
Confidence 6899999999999999999999994445655554422211111 000111111000 0000 00 000
Q ss_pred CccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 366 ~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
..-....+.|+++++|+++++++|||| .... -+||.|+++|++++|+++.++|.+.+++..
T Consensus 65 ~~~~~~~~~G~~~~~r~~~l~~vg~~~-~~~~-~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~ 125 (193)
T PF13632_consen 65 SLGRPLFLSGSGMLFRREALREVGGFD-DPFS-IGEDMDLGFRLRRAGYRIVYVPDAIVYTEA 125 (193)
T ss_pred hcCCCccccCcceeeeHHHHHHhCccc-cccc-ccchHHHHHHHHHCCCEEEEecccceeeeC
Confidence 111233577999999999999999999 3333 379999999999999999999999776553
|
|
| >PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.8e-10 Score=90.30 Aligned_cols=59 Identities=37% Similarity=0.683 Sum_probs=45.3
Q ss_pred cccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEE-EEEc
Q psy10463 370 TPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHV-AHLF 428 (605)
Q Consensus 370 ~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v-~H~~ 428 (605)
.+.+.||.++++|+.|.++|||||.|..||+||.||+.|++.+|.++...|.+.+ +|..
T Consensus 16 ~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~ 75 (78)
T PF02709_consen 16 YPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLW 75 (78)
T ss_dssp STT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEE
T ss_pred CCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEe
Confidence 4678899999999999999999999999999999999999999999988877665 5765
|
The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A .... |
| >PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis | Back alignment and domain information |
|---|
Probab=98.97 E-value=9e-10 Score=97.09 Aligned_cols=83 Identities=25% Similarity=0.565 Sum_probs=66.5
Q ss_pred ccccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCC--CeeeecCCCCCCCCCceEE
Q psy10463 513 FFGRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDE--SVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 513 ~~G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~--~~CLd~~~~~~~~g~~v~l 589 (605)
|+|.|++.. +++|||+. ... ..|++|++++| ++ ..+|.|.++ ..+.|+... ..||++.+.. .|+.+.+
T Consensus 1 ~~g~i~~~~~~~~cl~~~-~~~---~~~~~v~l~~c-~~-~~~Q~w~~~-~~~~i~~~~~~~~CL~~~~~~--~~~~i~l 71 (124)
T PF00652_consen 1 ASGYIRNVNKSGLCLDVQ-GST---KNGSPVVLYPC-DG-SDNQLWRFD-PDGQIRSNNNPNLCLDVDGSS--PGTKIVL 71 (124)
T ss_dssp EEEEEEEEEGGGEEEEEG-GSS---STTTBEEEEE---S-SGGGEEEEE-TTSBEEETTETTEEEEESSSS--TTEBEEE
T ss_pred CceEEEEeeCCCCeEEEc-CCC---CCCCEEEEEEC-CC-CCceeEEEc-CCCceeeccCcceEEEeeccC--CCceEEE
Confidence 578999977 99999998 333 56899999999 65 778999999 778888643 3599998765 5789999
Q ss_pred EeCCCCC-CcceEeCC
Q psy10463 590 LACSGFN-RQRWTYDK 604 (605)
Q Consensus 590 ~~C~~~~-~Q~W~~~~ 604 (605)
++|+... +|+|.+..
T Consensus 72 ~~C~~~~~~Q~W~~~~ 87 (124)
T PF00652_consen 72 WPCDSNSSNQRWKFDP 87 (124)
T ss_dssp EETTTTGGGGBEEEET
T ss_pred eeccCCccCCeEEEcC
Confidence 9999876 79999864
|
The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A .... |
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.7e-09 Score=103.61 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=73.5
Q ss_pred EEEEEEeecCchHHHHHHHHHHHh----cCC-ccCcceEEEEeCCCchhhHH---HHHHHHHHhc--CCCeEEeecCCCc
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVIS----RSP-RSMLKEILLVDDASTREFLK---SSLDEYVAKL--SVPTRVIRSPGRV 161 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~----~~~-~~~~~EiivvdD~S~d~~~~---~~~~~~~~~~--~~~v~~~~~~~~~ 161 (605)
+||+||+|||....|.++|.|+.. |.| +. +||+|+||+++++... ..+.+..++. ..++++++..++.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCC
Confidence 699999999997779999998875 565 44 8999999999875421 1223344444 3458888888887
Q ss_pred ch-HHHHHHHhhh--ccCceEEEecCcccccccc
Q psy10463 162 GL-IKARLLGARQ--AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 162 G~-~~a~n~g~~~--a~g~~i~~lD~d~~~~~~~ 192 (605)
|. +++.|.++.. +++++++++|+|..+.+++
T Consensus 79 g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~ 112 (254)
T cd04191 79 GRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDT 112 (254)
T ss_pred CccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHH
Confidence 77 5556666655 7889999999999887544
|
Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane. |
| >cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.6e-09 Score=92.08 Aligned_cols=81 Identities=35% Similarity=0.660 Sum_probs=64.2
Q ss_pred ccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecC-CCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATD-ESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~-~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.|++.. +++|||+.+.. +|+.|.+++| ++...+|.|.++ ..|.++.. +++||++.+.. .|..+.+++|
T Consensus 1 ~~~~~~~~~~~cL~~~~~~-----~~~~v~~~~c-~~~~~~Q~W~~~-~~g~~~~~~~~~Cl~~~~~~--~~~~~~~~~c 71 (124)
T cd00161 1 GTIRNVNNTGLCLDVNGGS-----DGGPVQLYPC-HGNGNNQKWTLT-SDGTIRIKSSNLCLDVGGDA--PGSKVRLYTC 71 (124)
T ss_pred CeeEeCCCCCeEEECCCCC-----CCCEEEEEEC-CCCCccCCEEEe-CCCeEEEcCCCeEEcccCCC--CCCEEEEEEC
Confidence 3566666 89999987642 3678999999 664589999999 68888865 57999987654 4679999999
Q ss_pred CC-CCCcceEeCC
Q psy10463 593 SG-FNRQRWTYDK 604 (605)
Q Consensus 593 ~~-~~~Q~W~~~~ 604 (605)
++ ..+|+|.+..
T Consensus 72 ~~~~~~Q~W~~~~ 84 (124)
T cd00161 72 SGGSDNQRWTFNK 84 (124)
T ss_pred CCCCcCCEEEECC
Confidence 98 4499999864
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.3e-08 Score=114.87 Aligned_cols=102 Identities=8% Similarity=-0.060 Sum_probs=82.7
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHH-hcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC--Ccch
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 163 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~-~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~G~ 163 (605)
++.|.+||+||+|||+ ..+.+++++++ .+.||+ +||++++|++++.|. +.+++..++++ .++++.... +.|+
T Consensus 60 ~~~~~vsIlVPa~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~-~~~~~l~~~~p-~~~~v~~~~~g~~gK 134 (727)
T PRK11234 60 PDEKPLAIMVPAWNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQ-ADVDAVCARFP-NVHKVVCARPGPTSK 134 (727)
T ss_pred CCCCCEEEEEecCcch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHH-HHHHHHHHHCC-CcEEEEeCCCCCCCH
Confidence 5679999999999999 99999999987 689998 799999998877774 45777766664 455544443 7899
Q ss_pred HHHHHHHhhhc-------c--CceEEEecCccccccccc
Q psy10463 164 IKARLLGARQA-------E--GEILVFLDAHCECTLVFN 193 (605)
Q Consensus 164 ~~a~n~g~~~a-------~--g~~i~~lD~d~~~~~~~~ 193 (605)
+.|.|.|+..+ . .+.+++.|+|+.+.++++
T Consensus 135 a~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L 173 (727)
T PRK11234 135 ADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMEL 173 (727)
T ss_pred HHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHH
Confidence 99999999987 3 356788999998876554
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.4e-09 Score=89.15 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=68.1
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC-Cce--ee-cCCCeeeecCCCCCCCCCceEE
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP-TDL--IA-TDESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~-~g~--i~-~~~~~CLd~~~~~~~~g~~v~l 589 (605)
.-.|++..+++|||+.+... .+|+.|.+++| ++ ..+|+|.+... +|. |+ ..+++|||+.+...++|+.|.+
T Consensus 16 ~Y~i~n~~sg~~L~v~~~~~---~~g~~v~~~~~-~~-~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~~~~~g~~v~~ 90 (105)
T PF14200_consen 16 YYKIRNVNSGKYLDVAGGST---ANGTNVQQWTC-NG-NDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGGSTANGTNVQQ 90 (105)
T ss_dssp EEEEEETTTTEEEEEGCTTC---STTEBEEEEES-SS-SGGGEEEEEESTTSEEEEEETSTTEEEEEGGGSSSTTEBEEE
T ss_pred EEEEEECCCCCEEEeCCCCc---CCCcEEEEecC-CC-CcCcEEEEEEecCCeEEEEECCCCcEEEECCCCCCCCCEEEE
Confidence 45788888999999987665 57899999999 55 78999998733 343 33 3568999999888888999999
Q ss_pred EeC-CCCCCcceEeC
Q psy10463 590 LAC-SGFNRQRWTYD 603 (605)
Q Consensus 590 ~~C-~~~~~Q~W~~~ 603 (605)
++| ++..+|+|.+.
T Consensus 91 ~~~~~~~~~Q~W~l~ 105 (105)
T PF14200_consen 91 WEYDNGSDNQQWKLE 105 (105)
T ss_dssp EE-STSSGGGEEEEE
T ss_pred EeCCCCCccCEEEeC
Confidence 999 77669999873
|
... |
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.9e-08 Score=89.60 Aligned_cols=94 Identities=31% Similarity=0.390 Sum_probs=78.5
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||+. ..|..++.|+..+.+.. .|++|+||+|++.+... +.+.... ...+..+....+.|.+.++|.++..
T Consensus 1 iii~~~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 75 (156)
T cd00761 1 VIIPAYNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEI-LEEYAKK-DPRVIRVINEENQGLAAARNAGLKA 75 (156)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHH-HHHHHhc-CCCeEEEEecCCCChHHHHHHHHHH
Confidence 689999998 99999999999998744 79999999999987543 3333222 2357788889999999999999999
Q ss_pred ccCceEEEecCcccccccc
Q psy10463 174 AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~~ 192 (605)
+.+++++++|+|+...+.+
T Consensus 76 ~~~d~v~~~d~D~~~~~~~ 94 (156)
T cd00761 76 ARGEYILFLDADDLLLPDW 94 (156)
T ss_pred hcCCEEEEECCCCccCccH
Confidence 9999999999999876543
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als |
| >cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-08 Score=88.74 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=65.0
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
.|.++...+++|||+.+.. +|.++.+++| ++...+|+|.+. ..+.|++ .+++|||+.+... +|..|.+++|
T Consensus 43 ~g~~~~~~~~~Cl~~~~~~-----~~~~~~~~~c-~~~~~~Q~W~~~-~~~~i~~~~~~~cl~~~~~~~-~~~~v~~~~c 114 (124)
T cd00161 43 DGTIRIKSSNLCLDVGGDA-----PGSKVRLYTC-SGGSDNQRWTFN-KDGTIRNLKSGKCLDVKGGNT-NGTNLILWTC 114 (124)
T ss_pred CCeEEEcCCCeEEcccCCC-----CCCEEEEEEC-CCCCcCCEEEEC-CCcEEEECCCCeEEeCCCCCC-CCCEEEEEeC
Confidence 4777776678999986542 3688999999 554679999998 6577775 3579999987655 6789999999
Q ss_pred CCCCCcceEe
Q psy10463 593 SGFNRQRWTY 602 (605)
Q Consensus 593 ~~~~~Q~W~~ 602 (605)
++..+|+|.+
T Consensus 115 ~~~~~Q~W~~ 124 (124)
T cd00161 115 DGGPNQKWKF 124 (124)
T ss_pred CCCccceEeC
Confidence 9888999975
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-07 Score=106.65 Aligned_cols=105 Identities=16% Similarity=0.080 Sum_probs=78.9
Q ss_pred CCCCcEEEEEEeecCchH----HHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHH---HHHHHHhc--CCCeEEeec
Q psy10463 87 EFLPKSSIVIVFHNEAWS----ALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS---LDEYVAKL--SVPTRVIRS 157 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~----~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~---~~~~~~~~--~~~v~~~~~ 157 (605)
...|+++|+||+|||+.+ .|..+++|+..+.+++ .+|++|+||++++++.... ..+..++. ..++.+.+.
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R 199 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR 199 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 557899999999999853 6888999999888754 3899999999999874322 23444444 345788777
Q ss_pred CCCcc-hHHHHHHHhhh--ccCceEEEecCcccccccc
Q psy10463 158 PGRVG-LIKARLLGARQ--AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 158 ~~~~G-~~~a~n~g~~~--a~g~~i~~lD~d~~~~~~~ 192 (605)
.+|.| ++++.|..++. +.+||++.+|+|..+.+++
T Consensus 200 ~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~ 237 (691)
T PRK05454 200 RRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDT 237 (691)
T ss_pred CcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHH
Confidence 76665 45566666877 5669999999999886544
|
|
| >KOG2547|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.4e-07 Score=94.39 Aligned_cols=202 Identities=13% Similarity=0.121 Sum_probs=139.7
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCChHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLIK 273 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~~~ 273 (605)
+.+|.||||.|...-. +.+...++|.....|+. +|++.+-+.++|+..+ .++.+.+++| ...+++-..+..|..-
T Consensus 82 ~~LPgVSiikPl~G~d-~nl~~Nlesffts~Y~~--~ElLfcv~s~eDpAi~-vv~~Ll~kyp~VdAklf~gG~~vg~np 157 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVD-PNLYHNLESFFTSQYHK--YELLFCVESSEDPAIE-VVERLLKKYPNVDAKLFFGGEKVGLNP 157 (431)
T ss_pred CCCCCceEEeecccCC-chhHHhHHHHHhhccCc--eEEEEEEccCCCcHHH-HHHHHHhhCCCcceEEEEcccccccCh
Confidence 4799999999999999 99999999999988875 8999998888888544 8899999998 2347888777788644
Q ss_pred HHH---HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 274 ARL---LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 274 arN---~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
-.| -|.+.|+.|+|+|.|+|..+.||.+-.|...+..+.+ +.|+..-...| ++||+-.+.-.+
T Consensus 158 KInN~mpgy~~a~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~d-------------r~Gf~atle~~~ 224 (431)
T KOG2547|consen 158 KINNMMPGYRAAKYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKD-------------RQGFDATLEQVY 224 (431)
T ss_pred hhhccCHHHHHhcCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeec-------------cccchhhhhhee
Confidence 433 6899999999999999999999999999999987655 33332111111 344432222111
Q ss_pred eec-CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 350 YTY-GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 350 ~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
..- +.+.. .......+. +.+|-..++||+++++.||+- .+..|-.||+=+...+...|++..+.
T Consensus 225 fgTsh~r~y---l~~n~~~~~--c~tgms~~mrK~~ld~~ggi~-~f~~yLaedyFaaksllSRG~ksais 289 (431)
T KOG2547|consen 225 FGTSHPRIY---LSGNVLGFN--CSTGMSSMMRKEALDECGGIS-AFGGYLAEDYFAAKSLLSRGWKSAIS 289 (431)
T ss_pred eccCCceEE---Ecccccccc--ccccHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 110 00000 000011111 222334468999999999983 44445579998888888888775443
|
|
| >KOG3916|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.4e-07 Score=91.76 Aligned_cols=149 Identities=21% Similarity=0.322 Sum_probs=97.0
Q ss_pred CCcceEEEEeechhhHHHH---HHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 197 LPKSSIVIVFHNEAWSALL---RTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~---~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
.-+|.||||++|+. ..|. .-|..++.+..-+ +-|+||+...++. +..+.
T Consensus 150 r~kvAIIIPfR~Re-~HL~~~l~~LhP~LqrQrL~--y~iyVieQ~g~~~-------------------------FNRak 201 (372)
T KOG3916|consen 150 RHKVAIIIPFRNRE-EHLRYLLHHLHPFLQRQRLD--YRIYVIEQAGNKP-------------------------FNRAK 201 (372)
T ss_pred cceeEEEeecccHH-HHHHHHHHHhhHHHHhhhhc--eeEEEEEecCCCc-------------------------ccHHH
Confidence 34799999999999 6654 4455555554333 6777776544332 34455
Q ss_pred HHHHHHhhc----cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 274 ARLLGARQA----EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 274 arN~G~~~A----~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
-.|.|...| .-|-++|-|-|..+..|. ....||.. ..-.......+.+
T Consensus 202 L~NVGf~eAlkd~~wdCfIFHDVDllPenDr------------NlY~C~~~----------PRH~sva~dk~gy------ 253 (372)
T KOG3916|consen 202 LLNVGFLEALKDYGWDCFIFHDVDLLPENDR------------NLYGCPEQ----------PRHMSVALDKFGY------ 253 (372)
T ss_pred hhhhHHHHHHHhcCCCEEEEecccccccCCC------------CccCCCCC----------Ccchhhhhhhccc------
Confidence 578887776 346789999997764332 22223210 0000000001111
Q ss_pred eecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEE
Q psy10463 350 YTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEI 418 (605)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 418 (605)
..+-..+-||..++.++-|.+|.||...|-+|||||-||+-|+...|++|.-
T Consensus 254 -----------------~LPY~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsR 305 (372)
T KOG3916|consen 254 -----------------RLPYKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISR 305 (372)
T ss_pred -----------------cccchhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeec
Confidence 1112346688889999999999999999999999999999999999999864
|
|
| >smart00458 RICIN Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Probab=98.68 E-value=5.7e-08 Score=84.64 Aligned_cols=78 Identities=24% Similarity=0.485 Sum_probs=61.4
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
-|.|++. +++|||+.+.. +.++.++.| ++...+|+|.+. ..+.|++ .+++|||+.+.... .++.+++|
T Consensus 38 ~g~~~~~-~~~Cl~~~~~~------~~~v~l~~c-~~~~~~Q~W~~~-~~~~i~~~~~~~cl~~~~~~~~--~~~~~~~c 106 (117)
T smart00458 38 DGAIRIA-TDLCLTANGNT------GSTVTLYSC-DGDADNQYWTVN-KDGTIRNPDSGLCLDVKDGNTG--TKVILWTC 106 (117)
T ss_pred CCeEEec-CCccCccCCCC------CCEEEEEEC-CCCCcCCEEEEC-CCeeEEeCCCCEEEecCCCCCC--ceEEEEeC
Confidence 4777776 78999986532 157899999 555789999998 6778875 47899999875432 47999999
Q ss_pred CCCCCcceEe
Q psy10463 593 SGFNRQRWTY 602 (605)
Q Consensus 593 ~~~~~Q~W~~ 602 (605)
++..+|+|.+
T Consensus 107 ~~~~~Q~W~~ 116 (117)
T smart00458 107 NGNPNQKWIF 116 (117)
T ss_pred CCCccccEEe
Confidence 9878999986
|
Carbohydrate-binding domain formed from presumed gene triplication. |
| >PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.64 E-value=2e-06 Score=93.95 Aligned_cols=210 Identities=16% Similarity=0.210 Sum_probs=138.9
Q ss_pred CCcceEEEEeech-hhHHHHHHHHHHHh---cCCCCCceeEEEeeCCC-Ch----HHHHHHHHHHHHHCC-CCEEEEeCC
Q psy10463 197 LPKSSIVIVFHNE-AWSALLRTVHSVIS---RSPRSMLKEILLVDDAS-TR----EFLKSSLDEYVAKLS-VPTRVIRSP 266 (605)
Q Consensus 197 ~p~vSVIIp~~n~-~~~~l~~~l~sl~~---q~~~~~~~eIIvVDd~S-~d----~~~~~~l~~~~~~~~-~~v~~i~~~ 266 (605)
..+|.||||..++ . +.+.+-++...+ ++... .-++||-.++ .+ ..+++.++++..+++ .++.+|...
T Consensus 246 ~~~V~iIvPl~~r~~-~~~~~Fl~~~~~~~l~~~~~--~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~~~ 322 (499)
T PF05679_consen 246 STRVHIIVPLSGREA-DWFRRFLENFEKVCLETDDN--VFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWISVK 322 (499)
T ss_pred CCEEEEEEEecCccH-HHHHHHHHHHHHHhcccCCc--eEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEEec
Confidence 4779999999999 5 666655555433 23222 3455554443 22 123457778877765 468888887
Q ss_pred -CCCChHHHHHHHHhhc-cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeecc
Q psy10463 267 -GRVGLIKARLLGARQA-EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWE 344 (605)
Q Consensus 267 -~n~G~~~arN~G~~~A-~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~ 344 (605)
+.+..+.|...|++.. ..++++|+|.|..+++++|.+.-..-..+ .-|-.|++.. +|.+.... ++
T Consensus 323 ~~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g-~qvy~PI~Fs------~y~p~~~~--~~---- 389 (499)
T PF05679_consen 323 TGEFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRMNTIPG-KQVYFPIVFS------QYNPDIVY--AG---- 389 (499)
T ss_pred CCCccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHHhhhcC-cEEEEeeecc------ccCCcccc--cC----
Confidence 7788889999999865 45688889999999999999886655443 4556676531 12221100 00
Q ss_pred ceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh--CCCCcccccccchhhHHHHHHHHcC--CeEEEec
Q psy10463 345 LHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI--GAYDEEMQVWGGENLEMSFRVWQCG--GSIEIAP 420 (605)
Q Consensus 345 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i--GgfDe~~~~~g~ED~dl~~Rl~~~G--~~i~~~p 420 (605)
.+..............++ ...-|.+++-++.|.++ ||||.....||+||+||.-++.+.| ..+.-+|
T Consensus 390 -------~~~~~~~~~i~~~~G~w~--~~gfg~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ 460 (499)
T PF05679_consen 390 -------KPPEPDQFDISKDTGFWR--RFGFGMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAV 460 (499)
T ss_pred -------CCCccccCccCCCCCccc--cCCCceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEcc
Confidence 000000000001111122 22336778899999999 9999999999999999999999999 8899999
Q ss_pred ceEEEEEcccC
Q psy10463 421 CSHVAHLFRKA 431 (605)
Q Consensus 421 ~s~v~H~~r~~ 431 (605)
+..+.|.++..
T Consensus 461 ep~L~h~yh~~ 471 (499)
T PF05679_consen 461 EPGLVHRYHPK 471 (499)
T ss_pred CCCeEEEeccc
Confidence 99999998654
|
Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane |
| >smart00458 RICIN Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.4e-07 Score=82.16 Aligned_cols=72 Identities=26% Similarity=0.514 Sum_probs=56.7
Q ss_pred cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCC-CCCcc
Q psy10463 521 QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSG-FNRQR 599 (605)
Q Consensus 521 ~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~-~~~Q~ 599 (605)
.+++|||+.+. ++.|.+++| ++.+.+|.|.|+ ..|.++..+++||++.+... ..+.++.|++ ..+|+
T Consensus 5 ~~~~Cl~~~~~-------~~~v~l~~c-~~~~~~Q~w~~~-~~g~~~~~~~~Cl~~~~~~~---~~v~l~~c~~~~~~Q~ 72 (117)
T smart00458 5 NTGKCLDVNGN-------SNPVGLFDC-HGTGGNQLWKLT-SDGAIRIATDLCLTANGNTG---STVTLYSCDGDADNQY 72 (117)
T ss_pred cCCccEecCCC-------CceEEEEeC-CCCCccceEEEe-CCCeEEecCCccCccCCCCC---CEEEEEECCCCCcCCE
Confidence 57899998653 147899999 554678999999 88888864569999876421 5899999998 55999
Q ss_pred eEeCC
Q psy10463 600 WTYDK 604 (605)
Q Consensus 600 W~~~~ 604 (605)
|.+..
T Consensus 73 W~~~~ 77 (117)
T smart00458 73 WTVNK 77 (117)
T ss_pred EEECC
Confidence 99864
|
Carbohydrate-binding domain formed from presumed gene triplication. |
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.8e-07 Score=102.96 Aligned_cols=97 Identities=10% Similarity=0.047 Sum_probs=75.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHH-hcCCccCcceEEE---EeCCCchhhHHHHHHHHHHhcCCCeEEeecCCC--
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILL---VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR-- 160 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~-~~~~~~~~~Eiiv---vdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~-- 160 (605)
...|.+||+||+|||+ +.|.++|++++ .+.||+ +||+| +||++|... +++....+ +.++++..+.+
T Consensus 68 ~~~~~vsIlVPa~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~~~----~~~~~~~~-p~~~~v~~~~~gp 139 (703)
T PRK15489 68 RDEQPLAIMVPAWKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETITE----VERMRRRY-KRLVRVEVPHDGP 139 (703)
T ss_pred cCCCceEEEEeCCCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHHHH----HHHHhccC-CcEEEEEcCCCCC
Confidence 4568999999999999 99999999987 679997 69999 588866655 44444444 36777665554
Q ss_pred cchHHHHHHHhhhc-------cCce--EEEecCccccccc
Q psy10463 161 VGLIKARLLGARQA-------EGEI--LVFLDAHCECTLV 191 (605)
Q Consensus 161 ~G~~~a~n~g~~~a-------~g~~--i~~lD~d~~~~~~ 191 (605)
.|++.|.|.|+..+ .+++ ++..|+|+.+++.
T Consensus 140 ~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~ 179 (703)
T PRK15489 140 TCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPL 179 (703)
T ss_pred CCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChh
Confidence 78999999999886 3444 8999999988754
|
|
| >PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.9e-07 Score=80.93 Aligned_cols=77 Identities=23% Similarity=0.466 Sum_probs=58.9
Q ss_pred ccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.|++.. .++||++.+.. +|+++.+++| +....+|.|.+. ..+.|++ .+++||++.+.. .+..|.+++|
T Consensus 46 ~~i~~~~~~~~CL~~~~~~-----~~~~i~l~~C-~~~~~~Q~W~~~-~~~~i~n~~s~~cL~~~~~~--~~~~l~~~~c 116 (124)
T PF00652_consen 46 GQIRSNNNPNLCLDVDGSS-----PGTKIVLWPC-DSNSSNQRWKFD-PDGRIRNKNSGLCLDVKGGS--DGNPLVLWPC 116 (124)
T ss_dssp SBEEETTETTEEEEESSSS-----TTEBEEEEET-TTTGGGGBEEEE-TTSBEEETTTTEEEEEGGGS--TTEBEEEEE-
T ss_pred CceeeccCcceEEEeeccC-----CCceEEEeec-cCCccCCeEEEc-CCeeEEeCCCCEEEEecCCC--CCCEEEEEEC
Confidence 6676655 34599987653 3678999999 555667999999 6677774 468999998754 4789999999
Q ss_pred CCCCCcce
Q psy10463 593 SGFNRQRW 600 (605)
Q Consensus 593 ~~~~~Q~W 600 (605)
++..+|+|
T Consensus 117 ~~~~~Q~W 124 (124)
T PF00652_consen 117 NGSPNQQW 124 (124)
T ss_dssp TSSGGGBE
T ss_pred CCCccccC
Confidence 76669999
|
The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A .... |
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.4e-05 Score=88.88 Aligned_cols=188 Identities=11% Similarity=0.097 Sum_probs=113.0
Q ss_pred CCCCcEEEEEEe---ecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVF---HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~---yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
+++|.+.|.|++ +.|..-....|+-|+++-.||....-+-|-|||.+.-|.....+. +++.-=|=+|-..-+.|.
T Consensus 98 ~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R~ 177 (734)
T PLN02893 98 SDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERC 177 (734)
T ss_pred ccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 569999999999 788878889999999999999977889999999999997665543 222211112211111111
Q ss_pred chHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhc-----------------
Q psy10463 162 GLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISR----------------- 224 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q----------------- 224 (605)
-.+ -.... ++ ....+|.. ...+ .+.++..|+++.+.
T Consensus 178 P~~---YF~~~-----------~~-~~~~e~~~-----------~k~~-Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f 230 (734)
T PLN02893 178 PEA---YFSSN-----------SH-SWSPETEQ-----------IKMM-YESMKVRVENVVERGKVSTDYITCDQEREAF 230 (734)
T ss_pred HHH---HhccC-----------CC-ccchHHHH-----------HHHH-HHHHHHHHHHHHhcCcCchhhhhhccccccc
Confidence 000 00000 00 00001100 0011 14445555554211
Q ss_pred ----------CCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCC
Q psy10463 225 ----------SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGE 285 (605)
Q Consensus 225 ----------~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd 285 (605)
..+. ..+ |+.|+.+..+ .. . ..+| .+.++..+++.| .++|.|.+++. +.|+
T Consensus 231 ~~w~~~~~~~dH~~-ivq-V~l~~~~~~d-~~----g--~~lP-~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~Tngp 300 (734)
T PLN02893 231 SRWTDKFTRQDHPT-VIQ-VLLESGKDKD-IT----G--HTMP-NLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAP 300 (734)
T ss_pred ccCcCCCCCCCCCc-eee-eeccCCCccc-hh----h--ccCC-ceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCC
Confidence 1111 112 2234433222 11 1 2366 899998888754 68999999985 7899
Q ss_pred EEEEecCCccc-CcChHHHHHHHHHcC
Q psy10463 286 ILVFLDAHCEC-TLGWLENLVARVAED 311 (605)
Q Consensus 286 ~i~flD~D~~~-~~~~L~~ll~~~~~~ 311 (605)
||+.+|+|..+ +|+.|.+.+-.+.+.
T Consensus 301 fIl~lDcD~y~n~p~~l~~amcff~Dp 327 (734)
T PLN02893 301 IILTLDCDMYSNDPQTPLRALCYLLDP 327 (734)
T ss_pred EEEEecCCcCCCchhHHHHHHHHhcCC
Confidence 99999999996 689999999988653
|
|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.6e-06 Score=85.55 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=72.4
Q ss_pred EEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC----C-------
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG----R------- 160 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~----~------- 160 (605)
+.|||++||.. ++|.++|+|+++|.|....+||||.+|||.+++. +.+..+ ...++++.+.. +
T Consensus 2 ~PVlv~ayNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~-~~v~~~----~~~i~~i~~~~~~~~~~~~~~~~ 75 (334)
T cd02514 2 IPVLVIACNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVA-DVAKSF----GDGVTHIQHPPISIKNVNPPHKF 75 (334)
T ss_pred cCEEEEecCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHHH-HHHHhh----ccccEEEEcccccccccCccccc
Confidence 57999999999 9999999999998544334899999999988753 333333 23466666432 2
Q ss_pred ---cchHH----HHHHHhhhccCceEEEecCccccccccc
Q psy10463 161 ---VGLIK----ARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 161 ---~G~~~----a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
.+++. |+|.+...+.++++++||.|+.+.+++.
T Consensus 76 ~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf 115 (334)
T cd02514 76 QGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFF 115 (334)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHH
Confidence 23344 8888888889999999999999986553
|
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. |
| >PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ] | Back alignment and domain information |
|---|
Probab=98.24 E-value=7e-05 Score=77.37 Aligned_cols=224 Identities=18% Similarity=0.206 Sum_probs=131.8
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHH--H---------------HHHHHHHHH-------
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL--K---------------SSLDEYVAK------- 255 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~--~---------------~~l~~~~~~------- 255 (605)
|=|.|..|... .+..||.+++++.......-|-||+.....+.. . +....+...
T Consensus 2 IFvsiasyRD~--~c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 79 (343)
T PF11397_consen 2 IFVSIASYRDP--ECAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWP 79 (343)
T ss_pred EEEEEeeecCc--hHHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhcccccccc
Confidence 34667777775 588999999988633323455566543222111 0 000111111
Q ss_pred ------CCCCEEEEeC--CCCCChHHHHHHHHhhccC-CEEEEecCCcccCcChHHHHHHHHHc--CCcEEEeeeEeeec
Q psy10463 256 ------LSVPTRVIRS--PGRVGLIKARLLGARQAEG-EILVFLDAHCECTLGWLENLVARVAE--DRTRVVCPVIDIIS 324 (605)
Q Consensus 256 ------~~~~v~~i~~--~~n~G~~~arN~G~~~A~g-d~i~flD~D~~~~~~~L~~ll~~~~~--~~~~vv~p~i~~i~ 324 (605)
...+|++++. ..-.|...||+.+.+.-+| +|.+.+|+|+.+.++|=+.|++.+.. ++..|.+.--..++
T Consensus 80 ~~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~~~ 159 (343)
T PF11397_consen 80 DGALCLRSDQIRVIRVDASEARGPCWARYLAQKLYRGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPGYE 159 (343)
T ss_pred cccccccCCeEEEEEeCHHHCcChHHHHHHHHHHhCCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCCcc
Confidence 1135666554 4468999999999988876 58999999999999999999998876 34455542211111
Q ss_pred C--CeeEEeccc--ccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccc-ccc
Q psy10463 325 D--VTFAYVRSF--ELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQ-VWG 399 (605)
Q Consensus 325 ~--~~~~~~~~~--~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~-~~g 399 (605)
. ......... .+....|.- ............. ......|..++..++|+++-+-++..++ .||+.+. ++.
T Consensus 160 ~~~~~~~~~~~~~~~lc~~~~~~---~g~~~~~~~~~~~-~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~ 234 (343)
T PF11397_consen 160 PDGGQPEPEKTTVPRLCAARFGP---DGMVRLGARWIKP-APKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFD 234 (343)
T ss_pred cccCCccccCCcccEEEEeEECC---CCcEeecceeccc-ccccCCCeeeceecccEEEcchhheecC-CCCCCcccccc
Confidence 1 000000000 000111100 0011111111111 1122456667777766665555555554 8999872 346
Q ss_pred chhhHHHHHHHHcCCeEEEecceEEEEEccc
Q psy10463 400 GENLEMSFRVWQCGGSIEIAPCSHVAHLFRK 430 (605)
Q Consensus 400 ~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~ 430 (605)
||++-++.|+|-.|+.++.-+...++|.+..
T Consensus 235 GEE~~~aaRlwT~GYD~Y~P~~~v~~H~Y~r 265 (343)
T PF11397_consen 235 GEEISMAARLWTHGYDFYSPTRNVLFHLYSR 265 (343)
T ss_pred cHHHHHHHHHHHcCCccccCCCceeEEEccC
Confidence 9999999999999999999999999999974
|
|
| >PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00067 Score=71.47 Aligned_cols=192 Identities=17% Similarity=0.221 Sum_probs=96.2
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--------
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-------- 267 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-------- 267 (605)
..+.+-|+|.++|++ ..+.+||+++++..+....+.|||-.||+... +.+.+..+.. .+++++...
T Consensus 91 ~~~~~pVlV~AcNRp-~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~-~~~vi~~y~~----~v~~i~~~~~~~i~~~~ 164 (434)
T PF03071_consen 91 KEPVIPVLVFACNRP-DYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEE-VAEVIKSYGD----QVTYIQHPDFSPITIPP 164 (434)
T ss_dssp ------EEEEESS-T-T-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HH-HHHHHHGGGG----GSEEEE-S--S-----T
T ss_pred CCCcceEEEEecCCc-HHHHHHHHHHHHcCCCCCCccEEEEecCCcHH-HHHHHHHhhh----hheeeecCCcCCceeCc
Confidence 466788999999999 99999999999976554457899999998765 3444554422 345554321
Q ss_pred -CCChH----HHHH--HHHhh----ccCCEEEEecCCcccCcChHHHHHHH---HHcCCcE-EEeeeEeeecCCeeEEec
Q psy10463 268 -RVGLI----KARL--LGARQ----AEGEILVFLDAHCECTLGWLENLVAR---VAEDRTR-VVCPVIDIISDVTFAYVR 332 (605)
Q Consensus 268 -n~G~~----~arN--~G~~~----A~gd~i~flD~D~~~~~~~L~~ll~~---~~~~~~~-vv~p~i~~i~~~~~~~~~ 332 (605)
...+. -|+. .|+.. -..+.++++.+|.++.||+++-+.+. +++++.. .+++- +++.
T Consensus 165 ~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSaw----NdnG----- 235 (434)
T PF03071_consen 165 KEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAW----NDNG----- 235 (434)
T ss_dssp T-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES------TT------
T ss_pred ccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEcc----ccCC-----
Confidence 10111 1222 22222 25688999999999999998877664 4555442 22211 0000
Q ss_pred ccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHH-HH
Q psy10463 333 SFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRV-WQ 411 (605)
Q Consensus 333 ~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl-~~ 411 (605)
.........+...+++..+.|-..|+.|+.|+++.. .|-..-+|.++|. .+
T Consensus 236 ----------------------~~~~~~~~~~~~lyRsdffpglGWml~r~~w~el~~------~Wp~~~WDdwmR~~~~ 287 (434)
T PF03071_consen 236 ----------------------KEHFVDDSRPSLLYRSDFFPGLGWMLTRELWDELEP------KWPKAFWDDWMRQPEQ 287 (434)
T ss_dssp ----------------------BGGGS-TT-TT-EEEESS---SSEEEEHHHHHHHGG------G--SS-HHHHHTSHHH
T ss_pred ----------------------ccccccCCCccceEecccCCchHHHhhHHHHHhhcc------cCCCCCchhhhcCccc
Confidence 000000112344567777888889999999998752 2333447777773 23
Q ss_pred cCCeEEEecc-eEEEEEccc
Q psy10463 412 CGGSIEIAPC-SHVAHLFRK 430 (605)
Q Consensus 412 ~G~~i~~~p~-s~v~H~~r~ 430 (605)
..+|-.+.|+ ++++|..+.
T Consensus 288 rkgR~cIrPeisRt~~fg~~ 307 (434)
T PF03071_consen 288 RKGRQCIRPEISRTYHFGKK 307 (434)
T ss_dssp HTT-EEEEESSBSEEE--SS
T ss_pred cCCCceeeccCCCccccCcC
Confidence 3445444455 457776543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A. |
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.5e-05 Score=80.91 Aligned_cols=135 Identities=16% Similarity=0.151 Sum_probs=78.1
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
.|+.....|||+++|+|+.+.|+.+..|+..+.+++. ..+|+.+..-+.. .. .-.....|.+. -+.
T Consensus 195 ~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~-~s----~~t~~Q~fEY~--------ish 261 (527)
T PF03142_consen 195 IGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKG-QS----WWTMYQVFEYA--------ISH 261 (527)
T ss_pred hccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCC-CC----Hhhheeccchh--------HHH
Confidence 3555566799999999999999999999999987765 6777654222211 00 00001111111 111
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhH--------------hCCCCc---------ccccccchhhHHHHHHHHc
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFH--------------IGAYDE---------EMQVWGGENLEMSFRVWQC 412 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~--------------iGgfDe---------~~~~~g~ED~dl~~Rl~~~ 412 (605)
...+....... .+....|++-++|-+.... +.+|.+ .+ ..-+||--|+--+.+.
T Consensus 262 ~l~Ka~Es~fG--~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl-~~lGEDR~LttLlLk~ 338 (527)
T PF03142_consen 262 HLQKAFESVFG--SVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNL-LDLGEDRWLTTLLLKQ 338 (527)
T ss_pred HHHHHHHHHhC--ceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhh-hhcchhHHHHHHHHhh
Confidence 11111111111 2345667777766655443 112211 11 1358999999887776
Q ss_pred --CCeEEEecceEEEEE
Q psy10463 413 --GGSIEIAPCSHVAHL 427 (605)
Q Consensus 413 --G~~i~~~p~s~v~H~ 427 (605)
|+++.++|.|...-.
T Consensus 339 ~~~~k~~y~~~A~a~T~ 355 (527)
T PF03142_consen 339 FPGYKTEYVPSAVAYTD 355 (527)
T ss_pred CCCceEEEccccccccc
Confidence 789999999876533
|
4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups |
| >PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0028 Score=62.71 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=83.9
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeE-EEeeCCCChHHHHHHHHHHHHH----------CCCCEEEEe
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEI-LLVDDASTREFLKSSLDEYVAK----------LSVPTRVIR 264 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eI-IvVDd~S~d~~~~~~l~~~~~~----------~~~~v~~i~ 264 (605)
..+.|-|+.|..|.+ +.+.+-+..|.+.++|.....+ .+|.|.+..+.+.+.+++..++ +. .|.+++
T Consensus 23 ~~e~VLILtplrna~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~-~itIl~ 100 (269)
T PF03452_consen 23 NKESVLILTPLRNAA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFR-SITILR 100 (269)
T ss_pred cCCeEEEEEecCCch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcc-eEEEEc
Confidence 467899999999999 9999999999999999877787 4555555333444455544433 22 677776
Q ss_pred CCCC--------------------CChHHHHHHHHhhc---cCCEEEEecCCccc-CcChHHHHHHHHHcCCcEEEeeeE
Q psy10463 265 SPGR--------------------VGLIKARLLGARQA---EGEILVFLDAHCEC-TLGWLENLVARVAEDRTRVVCPVI 320 (605)
Q Consensus 265 ~~~n--------------------~G~~~arN~G~~~A---~gd~i~flD~D~~~-~~~~L~~ll~~~~~~~~~vv~p~i 320 (605)
.+-. .-+++|||.-+..| ..+|++++|+|++- +|+.|+.| ......++.|.+
T Consensus 101 ~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dl----i~~~kdIivPn~ 176 (269)
T PF03452_consen 101 KDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDL----IAHDKDIIVPNC 176 (269)
T ss_pred CCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHH----HhCCCCEEccce
Confidence 5431 11577888877776 45899999999985 45554444 456677777776
|
These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes []. |
| >PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0067 Score=50.74 Aligned_cols=82 Identities=22% Similarity=0.126 Sum_probs=53.8
Q ss_pred echhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC---h-HHHHHHHHhh-
Q psy10463 207 HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG---L-IKARLLGARQ- 281 (605)
Q Consensus 207 ~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G---~-~~arN~G~~~- 281 (605)
+|++ ..|.+.|...++.-. ..|+|+||+|+|++.. .++ +++ .++++....... . ...++.-++.
T Consensus 1 rne~-~~L~~wl~~~~~lG~----d~i~i~d~~s~D~t~~-~l~----~~~-~v~i~~~~~~~~~~~~~~~~~~~~~~~~ 69 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGV----DHIYIYDDGSTDGTRE-ILR----ALP-GVGIIRWVDPYRDERRQRAWRNALIERA 69 (97)
T ss_pred CChH-HHHHHHHHHHHHcCC----CEEEEEECCCCccHHH-HHH----hCC-CcEEEEeCCCccchHHHHHHHHHHHHhC
Confidence 4777 888899988865432 4799999999998533 444 444 577776554332 1 1223333333
Q ss_pred ccCCEEEEecCCcccCcC
Q psy10463 282 AEGEILVFLDAHCECTLG 299 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~ 299 (605)
..+++++++|+|-.+.+.
T Consensus 70 ~~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 70 FDADWVLFLDADEFLVPP 87 (97)
T ss_pred CCCCEEEEEeeeEEEecC
Confidence 478999999999876433
|
|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.015 Score=67.01 Aligned_cols=202 Identities=10% Similarity=0.046 Sum_probs=118.9
Q ss_pred CCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCcc
Q psy10463 88 FLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRVG 162 (605)
Q Consensus 88 ~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~G 162 (605)
.+|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-..-+.|.-
T Consensus 329 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaP 408 (1040)
T PLN02189 329 MLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAP 408 (1040)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCH
Confidence 49999999999754 446778899999999999877789999999999997665443 2222211111111111110
Q ss_pred hHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC
Q psy10463 163 LIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST 241 (605)
Q Consensus 163 ~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~ 241 (605)
.+- ... +.++. -|. ..+...+|.. . .+..+.++..|+++.++.... ..|--+.+||+.
T Consensus 409 e~Y---Fs~---~~~~~--~~~~~~~F~~e~~~-----------~-K~eYEe~kvRI~~l~a~~~~~-p~~~~~m~dGt~ 467 (1040)
T PLN02189 409 EFY---FSL---KVDYL--KDKVQPTFVKERRA-----------M-KREYEEFKVRINAIVAKAQKV-PPEGWIMQDGTP 467 (1040)
T ss_pred HHH---hcc---CCCcc--cccCCchHHHHHHH-----------H-HHHHHHHHHHHHHHHhhcCcc-CCccceeccCcc
Confidence 000 000 00000 000 0000001100 0 011256777777776433211 135566788872
Q ss_pred --------hHHHHHHHHHH-------HHHCCCCEEEEeCCCCCC-----hHHHHHHHHh----hccCCEEEEecCCcccC
Q psy10463 242 --------REFLKSSLDEY-------VAKLSVPTRVIRSPGRVG-----LIKARLLGAR----QAEGEILVFLDAHCECT 297 (605)
Q Consensus 242 --------d~~~~~~l~~~-------~~~~~~~v~~i~~~~n~G-----~~~arN~G~~----~A~gd~i~flD~D~~~~ 297 (605)
.+.+.+++.+- -..+| .+.||..+++.| .++|+|..++ .+.|+||+.||+|..++
T Consensus 468 W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP-~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~N 546 (1040)
T PLN02189 468 WPGNNTRDHPGMIQVFLGHSGGHDTEGNELP-RLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYIN 546 (1040)
T ss_pred CCCCCCCCCHHHHHHHhcCCCCccccccccc-eeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccC
Confidence 23333333220 11244 688898888888 5899999984 45899999999999985
Q ss_pred -cChHHHHHHHHHcC
Q psy10463 298 -LGWLENLVARVAED 311 (605)
Q Consensus 298 -~~~L~~ll~~~~~~ 311 (605)
+..|.+.+-.+.+.
T Consensus 547 ns~alr~AMCfflDp 561 (1040)
T PLN02189 547 NSKAVREAMCFLMDP 561 (1040)
T ss_pred chHHHHHhhhhhcCC
Confidence 69999999988764
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0014 Score=55.88 Aligned_cols=51 Identities=18% Similarity=0.306 Sum_probs=40.9
Q ss_pred cceEEEEecC---Ccee--e-cCCCeeeecCCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 553 LTQMFVMKLP---TDLI--A-TDESVCLDVPEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 553 ~nQ~w~~~~~---~g~i--~-~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
.||+|+++.. .|.. + ..+++||++.+....+|+.|.+++|++..+|+|.+.
T Consensus 1 ~nQ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~ 57 (105)
T PF14200_consen 1 DNQQWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIE 57 (105)
T ss_dssp CGGEEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEE
T ss_pred CCCEEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEE
Confidence 3799998731 3443 3 357899999988888899999999999779999975
|
... |
| >PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0089 Score=61.66 Aligned_cols=156 Identities=16% Similarity=0.228 Sum_probs=91.8
Q ss_pred CChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc----CCcEEEeeeEeeecCCeeEEeccc--c-cceeee
Q psy10463 269 VGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE----DRTRVVCPVIDIISDVTFAYVRSF--E-LHWGAF 341 (605)
Q Consensus 269 ~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~----~~~~vv~p~i~~i~~~~~~~~~~~--~-~~~g~~ 341 (605)
.-.-..||.|...|+.++++.+|.|..+.++.-+.+.+.+.. .....|.|..+.-....+-..... . ...|..
T Consensus 113 YPiN~LRNvAr~~a~T~~v~~~DvD~~ps~~l~~~l~~~~~~~~~~~~~a~VvPaFE~~~~~~~P~~K~eL~~~~~~~~~ 192 (317)
T PF13896_consen 113 YPINLLRNVARSGARTDYVFLLDVDFLPSPGLYEKLLRFARRNIDKSKTAFVVPAFETREGADIPRTKKELLELLKNGKA 192 (317)
T ss_pred CChHHHHHHHHHhcCcceEEEecceeeeCcchHHHHHHHhhhhccCCceEEEEeeeecccCcCCCCCHHHHHHHHHhCch
Confidence 345678999999999999999999999999988888777654 344778888754333221100000 0 000100
Q ss_pred eccceeeEeecCc--hhHhhhcc-----CCCCccccccccce--EEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHc
Q psy10463 342 NWELHFRWYTYGS--SDAIIKRK-----DFTEPFKTPAMAGG--LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQC 412 (605)
Q Consensus 342 ~~~l~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~G~--~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~ 412 (605)
..++.+....+. .....-.. ....++.+..-.+- .+..+| ..-.|||.|..+|..-.-...-+...
T Consensus 193 -~~Fh~~~~~~~h~~t~~~~W~~~~~~~~~~~~y~v~~~~~~EP~~I~~~----~~P~yDErF~~yg~nk~s~~~eL~~~ 267 (317)
T PF13896_consen 193 -RPFHHKVCPQGHGPTNYDRWFSAPESDELDVPYEVKYEDGWEPYYIGRR----NVPLYDERFRGYGFNKISQIYELCAA 267 (317)
T ss_pred -hhccccccccCcCCccHHHHhccCCcCCCcceEEEccCCCccCEEEccC----CCCCCcccccccccchHHHHHHHHHc
Confidence 000000000000 00000000 00111222111111 233343 46789999999999999999999999
Q ss_pred CCeEEEecceEEEEEcc
Q psy10463 413 GGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 413 G~~i~~~p~s~v~H~~r 429 (605)
|+++.++|.+.+.|...
T Consensus 268 gy~F~VL~~aFlVH~~h 284 (317)
T PF13896_consen 268 GYRFHVLPNAFLVHRPH 284 (317)
T ss_pred CCEEEEcCCeeEEecCC
Confidence 99999999999999843
|
|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.084 Score=61.33 Aligned_cols=203 Identities=11% Similarity=0.051 Sum_probs=119.3
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 425 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 359999999999754 446778899999999999877789999999999997665443 222221111111111111
Q ss_pred chHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCC
Q psy10463 162 GLIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS 240 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S 240 (605)
-.+ -... +.++. -|. ..+...+|.. . .+..+.++..|+++.++.... ..|--+.+||+
T Consensus 426 Pe~---YFs~---~~~~~--~~~~~~~F~~e~~~-----------m-K~eYEe~k~RIe~l~a~~~~~-p~~~~~m~dgt 484 (1079)
T PLN02638 426 PEW---YFAQ---KIDYL--KDKVQPSFVKDRRA-----------M-KREYEEFKVRINGLVAKAQKV-PEEGWIMQDGT 484 (1079)
T ss_pred HHH---Hhcc---CCCcc--cccCCchHHHHHHH-----------H-HHHHHHHHHHHHHHHhhcccc-CCccccccCCc
Confidence 000 0000 00000 000 0000001100 0 112266778888877433111 12445567787
Q ss_pred C--------hHHHHHHHHHH-------HHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCCccc
Q psy10463 241 T--------REFLKSSLDEY-------VAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAHCEC 296 (605)
Q Consensus 241 ~--------d~~~~~~l~~~-------~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D~~~ 296 (605)
. .+++.+++.+- -..+| .+.|+..+++.| .++|+|..++. +.|+||+.||+|..+
T Consensus 485 ~W~g~~~~dHp~IiqVll~~~~~~d~~g~~lP-~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYi 563 (1079)
T PLN02638 485 PWPGNNTRDHPGMIQVFLGHSGGLDTEGNELP-RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYI 563 (1079)
T ss_pred cCCCCCCCCCHHHHHHHhcCCCcccccccccc-ceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCccc
Confidence 1 23333333210 01345 678888888888 58999999844 489999999999987
Q ss_pred C-cChHHHHHHHHHcC
Q psy10463 297 T-LGWLENLVARVAED 311 (605)
Q Consensus 297 ~-~~~L~~ll~~~~~~ 311 (605)
+ |..|.+.+-.+.+.
T Consensus 564 Nns~alr~AMCf~lDp 579 (1079)
T PLN02638 564 NNSKALREAMCFLMDP 579 (1079)
T ss_pred CchHHHHHhhhhhcCc
Confidence 5 99999999988754
|
|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.028 Score=64.55 Aligned_cols=203 Identities=10% Similarity=0.027 Sum_probs=111.4
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|.....+. +++.-=|=.|-..-+.|.
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 328 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRA 328 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 459999999999754 446677899999999999877789999999999997665443 222211111111111111
Q ss_pred chHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCC
Q psy10463 162 GLIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS 240 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S 240 (605)
-.+- ... +.++. -|. ..+...+|..- .+..+.++..|+++.+..... ..|.-...||+
T Consensus 329 Pe~Y---Fs~---~~~~~--~~~~~~~F~~e~~~~------------K~eYEe~k~RIe~~~~~~~~~-~~~~~~m~d~t 387 (977)
T PLN02195 329 PEFY---FSQ---KIDYL--KDKVQPSFVKERRAM------------KRDYEEYKVRVNALVAKAQKT-PEEGWTMQDGT 387 (977)
T ss_pred HHHH---hcc---CCCcc--cCCCCchhHHHHHHH------------HHHHHHHHHHHHHHHhhcccC-CcccccccCCc
Confidence 0000 000 00000 000 00000011000 011255666666665431100 01222223333
Q ss_pred --------ChHHHHHHHHH-------HHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCCccc
Q psy10463 241 --------TREFLKSSLDE-------YVAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAHCEC 296 (605)
Q Consensus 241 --------~d~~~~~~l~~-------~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D~~~ 296 (605)
+.+.+-+++-. --..+| .+.||..+++.| .++|+|.+++. +.|+||+.||+|..+
T Consensus 388 ~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP-~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~ 466 (977)
T PLN02195 388 PWPGNNTRDHPGMIQVFLGETGARDIEGNELP-RLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYV 466 (977)
T ss_pred cCCCCCCCCCcchhhhhccCCCCcccccccCc-eeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCcccc
Confidence 11111111100 011356 788888888888 48889999875 469999999999987
Q ss_pred Cc-ChHHHHHHHHHcC
Q psy10463 297 TL-GWLENLVARVAED 311 (605)
Q Consensus 297 ~~-~~L~~ll~~~~~~ 311 (605)
++ ++|.+.+-.+.+.
T Consensus 467 n~s~~lr~AMCf~~D~ 482 (977)
T PLN02195 467 NNSKAVREAMCFLMDP 482 (977)
T ss_pred CcHHHHHHHHhhccCc
Confidence 55 7999999888764
|
|
| >PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.013 Score=48.88 Aligned_cols=79 Identities=23% Similarity=0.142 Sum_probs=51.8
Q ss_pred ecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcc---hH-HHHHHHhhh-
Q psy10463 99 HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG---LI-KARLLGARQ- 173 (605)
Q Consensus 99 yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G---~~-~a~n~g~~~- 173 (605)
+||+ ..|.+.|..-+.... ..++|+||||+|+|.+ ++.+ . +.++++....... .. ..++.-.+.
T Consensus 1 rne~-~~L~~wl~~~~~lG~----d~i~i~d~~s~D~t~~-~l~~----~-~~v~i~~~~~~~~~~~~~~~~~~~~~~~~ 69 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGV----DHIYIYDDGSTDGTRE-ILRA----L-PGVGIIRWVDPYRDERRQRAWRNALIERA 69 (97)
T ss_pred CChH-HHHHHHHHHHHHcCC----CEEEEEECCCCccHHH-HHHh----C-CCcEEEEeCCCccchHHHHHHHHHHHHhC
Confidence 4777 889999998876642 4799999999999833 3333 3 3366655443221 11 223333333
Q ss_pred ccCceEEEecCcccc
Q psy10463 174 AEGEILVFLDAHCEC 188 (605)
Q Consensus 174 a~g~~i~~lD~d~~~ 188 (605)
..++|++++|+|.-.
T Consensus 70 ~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 70 FDADWVLFLDADEFL 84 (97)
T ss_pred CCCCEEEEEeeeEEE
Confidence 478999999999844
|
|
| >PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.017 Score=56.14 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=46.4
Q ss_pred EEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
|||||++-|+ ..+.+|++++.++..++ .|+|-||+ .....+++.|.|.|+
T Consensus 1 isiI~c~n~~--~~~~~~~~~i~~~~~~~--~~~i~i~~--------------------------~~~~~s~~~~yN~a~ 50 (217)
T PF13712_consen 1 ISIIICVNDE--ELYEECLRSIKRLIGPP--GELIEIDN--------------------------VRNAKSMAAAYNEAM 50 (217)
T ss_dssp EEEEEEES-H--HHHHHHHHHHHHTT--T--EEEEEEE---------------------------SSS-S-TTTHHHHHG
T ss_pred CEEEEEECCH--HHHHHHHHHHHhhCCCC--ceEEEEec--------------------------cCCCcCHHHHHHHHH
Confidence 5777766555 68889999999887665 46555554 223367888999999
Q ss_pred hhccCceEEEecCccccc
Q psy10463 172 RQAEGEILVFLDAHCECT 189 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~ 189 (605)
+.|+++|++|+..|....
T Consensus 51 ~~a~~~ylvflHqDv~i~ 68 (217)
T PF13712_consen 51 EKAKAKYLVFLHQDVFII 68 (217)
T ss_dssp GG--SSEEEEEETTEE-S
T ss_pred HhCCCCEEEEEeCCeEEc
Confidence 999999999999998764
|
|
| >KOG3917|consensus | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.014 Score=54.88 Aligned_cols=45 Identities=18% Similarity=0.405 Sum_probs=41.7
Q ss_pred cccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 372 AMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 372 ~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
.+.||.++++++-|.++.|....+-+||.||-||.+|+..+|..+
T Consensus 180 ~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLql 224 (310)
T KOG3917|consen 180 KFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQL 224 (310)
T ss_pred hhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceE
Confidence 578999999999999999999999999999999999999999654
|
|
| >PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.11 Score=51.01 Aligned_cols=202 Identities=16% Similarity=0.125 Sum_probs=103.9
Q ss_pred EEEeechhhHHHHHHHH----HHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHH---HHCCCCEEEEeCCCCC------
Q psy10463 203 VIVFHNEAWSALLRTVH----SVISRSPRSMLKEILLVDDASTREFLKSSLDEYV---AKLSVPTRVIRSPGRV------ 269 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~----sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~---~~~~~~v~~i~~~~n~------ 269 (605)
..-.||.+ +.|..... .+++.-.+.. .=|-|++++|.|. +++.|+.+. ...+.+-.++..+...
T Consensus 5 A~~l~~~~-~iL~~~~~~~ll~li~~LGp~n-v~vSIyE~~S~D~-T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~ 81 (241)
T PF11735_consen 5 AANLYNNE-DILPSLWGDALLELIRFLGPEN-VFVSIYESGSWDG-TKEALRALDAELDALGVPHSIVLSDITHRDEIER 81 (241)
T ss_pred EEEcccCH-hHHHHHHHHHHHHHHHHhCcCe-EEEEEEeCCCCcc-HHHHHHHHHHHHHhCCCCeEEEeCCCcccccccc
Confidence 33456655 45543333 3444434432 5777899999997 455676665 5555444554422211
Q ss_pred --------ChHHHHHHHHhhc---------cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEec
Q psy10463 270 --------GLIKARLLGARQA---------EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVR 332 (605)
Q Consensus 270 --------G~~~arN~G~~~A---------~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~ 332 (605)
-++.-||.+++-- .-+-|+||| |+.+.+.-+-+|+..-......++|. +|.+.+..|.-.-
T Consensus 82 ~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~~~~~~~aCa-mDf~~~~~fYD~w 159 (241)
T PF11735_consen 82 PPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRNRGNYDMACA-MDFINPPKFYDTW 159 (241)
T ss_pred cchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcCcccccchhh-cccccCcccccee
Confidence 1367899987432 235799999 77776654445544443333455554 4544333331000
Q ss_pred c-cccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhC--CCCc--ccccccchhhHHHH
Q psy10463 333 S-FELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIG--AYDE--EMQVWGGENLEMSF 407 (605)
Q Consensus 333 ~-~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG--gfDe--~~~~~g~ED~dl~~ 407 (605)
. .+. .|... ....++...............|+++.+..+|..+++.+.|..-+ .|.- .....+.|..=++.
T Consensus 160 v~RD~-~G~~~---~~~~~p~f~~~~~~~~~~~~~pv~V~SCWnG~va~~a~pf~~~~~lrFR~~~~~~~~~sEc~Li~~ 235 (241)
T PF11735_consen 160 VLRDI-EGDSF---GSPFWPYFRSASSRDRLRRGDPVPVFSCWNGMVAFDAEPFLPPTPLRFRADSEGECEASECCLIHA 235 (241)
T ss_pred EEecC-CCCcc---ccccCcCcCCHHHHHHHhcCCCeeeecccCCcccccchhhccCCceeecCCCCCceeccchhHhHh
Confidence 0 000 11110 01111111111222233456788888899999999999998765 2322 11122345554554
Q ss_pred HHHHcC
Q psy10463 408 RVWQCG 413 (605)
Q Consensus 408 Rl~~~G 413 (605)
-+|..|
T Consensus 236 D~~~~g 241 (241)
T PF11735_consen 236 DLWRWG 241 (241)
T ss_pred hhhhcC
Confidence 444433
|
It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor. |
| >PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.098 Score=53.26 Aligned_cols=107 Identities=22% Similarity=0.279 Sum_probs=62.8
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
+-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.++.+......++-++++..
T Consensus 49 l~~maIVVP~KnE~l----~lleGVL~gIPh~--C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA 122 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKL----KLLEGVLSGIPHD--CLIIVVSNSSREPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLA 122 (381)
T ss_dssp HTTEEEEEEESS--H----HHHHHHHHCS-TT--SEEEEEE---CSSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHH
T ss_pred HhCcEEEEECCCCch----hhhhhhhhcCCCC--CeEEEEECCCCCCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHH
Confidence 567899999999993 4455566655655 78999988877 4332 2356666665443566776653
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHc
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAE 310 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~ 310 (605)
+.|.+.++-.|+..| .-+||-|+|+|..+ |+.+.+.+..+..
T Consensus 123 ~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyi-PGaV~EYvk~yAA 185 (381)
T PF09488_consen 123 EAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYI-PGAVNEYVKDYAA 185 (381)
T ss_dssp HHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS--HHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCC-cchHHHHHHHHHh
Confidence 456777777786555 46999999999877 5555555555433
|
Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A. |
| >KOG2547|consensus | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.05 Score=55.43 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=82.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G~~~ 165 (605)
..+|.||||.|-.--. +.+..-++|.....|+. +|++.+-+-+.|+.++ ..++.+++++. ..+++.-.+.-|...
T Consensus 82 ~~LPgVSiikPl~G~d-~nl~~Nlesffts~Y~~--~ElLfcv~s~eDpAi~-vv~~Ll~kyp~VdAklf~gG~~vg~np 157 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVD-PNLYHNLESFFTSQYHK--YELLFCVESSEDPAIE-VVERLLKKYPNVDAKLFFGGEKVGLNP 157 (431)
T ss_pred CCCCCceEEeecccCC-chhHHhHHHHHhhccCc--eEEEEEEccCCCcHHH-HHHHHHhhCCCcceEEEEcccccccCh
Confidence 3599999999999998 99999999999999986 8999999999998754 46777777762 257888888788765
Q ss_pred HHH---HHhhhccCceEEEecCcccccc
Q psy10463 166 ARL---LGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 166 a~n---~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
-.| -|.+.|+.++++++|++....+
T Consensus 158 KInN~mpgy~~a~ydlvlisDsgI~m~p 185 (431)
T KOG2547|consen 158 KINNMMPGYRAAKYDLVLISDSGIFMKP 185 (431)
T ss_pred hhhccCHHHHHhcCCEEEEecCCeeecC
Confidence 544 4999999999999999986653
|
|
| >PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.11 Score=50.93 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=63.5
Q ss_pred HHHHHHHHhcCCCCCceeEEEe-eCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh---ccCCEE--E
Q psy10463 215 LRTVHSVISRSPRSMLKEILLV-DDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ---AEGEIL--V 288 (605)
Q Consensus 215 ~~~l~sl~~q~~~~~~~eIIvV-Dd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~---A~gd~i--~ 288 (605)
.-||.|+.+||.++ +..||+ |+.... ..++.|+++.+.+| .++++..+... ...+....++. ..++++ +
T Consensus 45 ~~~LpSl~~QTd~d--F~~lv~~~~~~P~-~~~~rL~~l~~~~p-~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 119 (234)
T PF11316_consen 45 TYCLPSLRAQTDQD--FTWLVLFDDDLPE-PYRERLRDLLADYP-QFRIVFRPPGP-HRDAMRRAINAARRDGADPVLQF 119 (234)
T ss_pred HHHhhHHHhccCCC--eEEEEEECCCCCH-HHHHHHHHHhccCC-CcEEEecCCch-HHHHHHHHHhhhccCCCCEEEEE
Confidence 35899999999887 677665 555554 46667888888888 78877665522 34444444322 244543 4
Q ss_pred EecCCcccCcChHHHHHHHHH
Q psy10463 289 FLDAHCECTLGWLENLVARVA 309 (605)
Q Consensus 289 flD~D~~~~~~~L~~ll~~~~ 309 (605)
-||+|+.+..++++.+-+...
T Consensus 120 RLDdDDAl~~dFV~rlr~~a~ 140 (234)
T PF11316_consen 120 RLDDDDALHRDFVARLRRAAA 140 (234)
T ss_pred EECCcchhhHHHHHHHHHHHH
Confidence 479999999999999999874
|
|
| >TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.34 Score=49.18 Aligned_cols=108 Identities=24% Similarity=0.291 Sum_probs=67.9
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
+-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.+..+..-...++-++++..
T Consensus 49 ~~~maIVVP~KdE~l----~lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~r~~i~vHQkDp~la 122 (381)
T TIGR02460 49 LGKTAIVVPVKNEKL----HLLEGVLSGIPHE--CPIIIVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALA 122 (381)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCChhHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 456889999999993 3445555555555 68888987754 3211 1244455443322455555442
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+.|.+.++-.|+..| ..+||-|+|+|..+ |+...+.+..+..+
T Consensus 123 ~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyi-PGaV~EYvk~yAaG 186 (381)
T TIGR02460 123 EAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYF-PGAVNEYVKIYAAG 186 (381)
T ss_pred HHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCC-CchHHHHHHHHHhh
Confidence 345666666776554 46999999999987 56666666655543
|
This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase. |
| >PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.33 Score=49.51 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=67.4
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
+-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.+..+..-...++-++++..
T Consensus 50 ~~~mAIVVP~KdE~l----~lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la 123 (393)
T PRK14503 50 LGRMAIVVPVKNERL----KLLEGVLKGIPHE--CPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLA 123 (393)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHH
Confidence 456889999999993 4445555555555 68888887644 3221 1244455443322455555442
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+.|.+.++-.|+..| ..+||-|+|+|..+ |+...+.+..+..+
T Consensus 124 ~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyi-PGaV~EYvk~yAAG 187 (393)
T PRK14503 124 EALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYI-PGAVNEYVKIYAAG 187 (393)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCC-CchHHHHHHHHHhh
Confidence 345566666665544 46999999999987 56666666655443
|
|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.24 Score=55.76 Aligned_cols=192 Identities=10% Similarity=0.038 Sum_probs=109.0
Q ss_pred CCCCcEEEEEEeec---CchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHN---EAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN---~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
+++|.|.|.|+++| |.......|+.|+++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-..-+.|.
T Consensus 90 ~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRa 169 (756)
T PLN02190 90 HDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRA 169 (756)
T ss_pred ccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCC
Confidence 35899999999999 8889999999999999999977788999999999997665543 222211111111111111
Q ss_pred chHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHHHHh------------------
Q psy10463 162 GLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVIS------------------ 223 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~------------------ 223 (605)
-.+- .... ..+. .+.+...+|..- .++.+.++..++....
T Consensus 170 Pe~Y---F~~~-~~~~------~~~~f~~e~~~~------------K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~ 227 (756)
T PLN02190 170 PFRY---FLNP-PVAT------EDSEFSKDWEMT------------KREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTK 227 (756)
T ss_pred HHHH---hcCC-CCCC------CCchhHHHHHHH------------HHHHHHHHHHHHhhccCCCCcccCCcccccCCCC
Confidence 0000 0000 0000 000110011000 0001222333332211
Q ss_pred -cCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCC
Q psy10463 224 -RSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAH 293 (605)
Q Consensus 224 -q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D 293 (605)
++.+. ..+|++ |+ +.... --..+| .+.++..+++.| .++|+|.-++. +.+++|+-+|.|
T Consensus 228 ~~dH~~-iiqVll-~~-~~~~~-------~~~~lP-~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCD 296 (756)
T PLN02190 228 PNDHST-IVKVVW-EN-KGGVG-------DEKEVP-HLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCD 296 (756)
T ss_pred CCCCcc-ceEEEe-cC-CCCcc-------ccccCc-eEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCc
Confidence 11111 134432 33 21110 012466 888999888888 58889987754 489999999999
Q ss_pred ccc-CcChHHHHHHHHHcC
Q psy10463 294 CEC-TLGWLENLVARVAED 311 (605)
Q Consensus 294 ~~~-~~~~L~~ll~~~~~~ 311 (605)
... ++..+.+.+-.+.+.
T Consensus 297 mY~Nns~~~r~AmCf~ld~ 315 (756)
T PLN02190 297 MYANEADVVRQAMCIFLQK 315 (756)
T ss_pred cccCchhHHHHhhhhhcCC
Confidence 987 788888888887643
|
|
| >KOG2571|consensus | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.023 Score=64.53 Aligned_cols=139 Identities=11% Similarity=0.029 Sum_probs=77.8
Q ss_pred hHHHHHHHHhhccC--CEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeecccee
Q psy10463 271 LIKARLLGARQAEG--EILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHF 347 (605)
Q Consensus 271 ~~~arN~G~~~A~g--d~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~ 347 (605)
.-...+........ +||+++|+|+.+.|+.+-.|++.++.++. +.+|+.|...-+....... .|.+.+++
T Consensus 426 ~r~~~y~~~~~L~~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG~I~~~~~~w~v~~Q-------~FEY~Ish 498 (862)
T KOG2571|consen 426 HRWVMYTAFKALMPSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACGRILNKGGSWVVAYQ-------NFEYAISH 498 (862)
T ss_pred HHHHHHHHHHHhcCcceEEEEecCCCccCcHHHHHHHHHhccCcccceeccccccCCCceEEeHH-------HHHHHHHH
Confidence 33444455554433 47799999999999999999999998765 7788766333222211111 11111100
Q ss_pred eEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh------------CCCCcccccccchhhHHHHHHHHcCCe
Q psy10463 348 RWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI------------GAYDEEMQVWGGENLEMSFRVWQCGGS 415 (605)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i------------GgfDe~~~~~g~ED~dl~~Rl~~~G~~ 415 (605)
...+...+.... +...+|+.-++|-+++..- +.+.-... -+||--||.++..+|++
T Consensus 499 --------~l~Ka~ESvFG~--VsclPGcfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~--~geDR~L~~~llskgy~ 566 (862)
T KOG2571|consen 499 --------NLQKATESVFGC--VSCLPGCFSLYRASALMDQFVEYFYGEKFSGPRHGIQYS--LGEDRWLCTLLLSKGYR 566 (862)
T ss_pred --------HHHHhhhhhcee--EEecCchhHHHHHHHHhcchHHhhhchhhcCcccccccc--cchhHHHHHHHHhccce
Confidence 011111111111 2234455445554333211 01111112 37999999999999999
Q ss_pred EEEecceEEEEEc
Q psy10463 416 IEIAPCSHVAHLF 428 (605)
Q Consensus 416 i~~~p~s~v~H~~ 428 (605)
+.|++.|...-..
T Consensus 567 l~Y~a~s~a~t~~ 579 (862)
T KOG2571|consen 567 LKYVAASDAETEA 579 (862)
T ss_pred eeeeccccccccC
Confidence 9999988776443
|
|
| >PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.062 Score=53.34 Aligned_cols=108 Identities=23% Similarity=0.247 Sum_probs=68.9
Q ss_pred ceEEEEe-echhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 200 SSIVIVF-HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 200 vSVIIp~-~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
.+|||.+ |.+. +.|.+.|.++.+.. .+.|||||=++....-. . ..... ...+|++++.+.|. -..|-.-
T Consensus 1 fTvvi~t~~~R~-~~L~~~l~~l~~~~---~l~~IvVvWn~~~~~P~--~-~~~~~-~~vpV~~~~~~~ns--LnnRF~p 70 (247)
T PF09258_consen 1 FTVVINTSYKRS-DLLKRLLRHLASSP---SLRKIVVVWNNPNPPPP--S-SKWPS-TGVPVRVVRSSRNS--LNNRFLP 70 (247)
T ss_dssp EEEEEEE-SS-H-HHHHHHHHHHTTST---TEEEEEEEEE-TS--TH--H-HHHT----S-EEEEEESSHH--GGGGGS-
T ss_pred CEEEEEecccch-HHHHHHHHHHHcCC---CCCeEEEEeCCCCCCCc--c-cccCC-CCceEEEEecCCcc--HHhcCcC
Confidence 4789999 9998 99999999984332 24799999665322110 1 12222 22478998866521 1122233
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEe
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~ 317 (605)
...-+.+.|+.+|+|..++.+.|+-..+..++.+..+||
T Consensus 71 ~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~pdrlVG 109 (247)
T PF09258_consen 71 DPEIETDAVLSLDDDVMLSCDELEFAFQVWREFPDRLVG 109 (247)
T ss_dssp -TT--SSEEEEEETTEEE-HHHHHHHHHHHCCSTTSEEE
T ss_pred ccccCcceEEEecCCcccCHHHHHHHHHHHHhChhheeC
Confidence 345688999999999999999999999999999988877
|
They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B. |
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.21 Score=53.20 Aligned_cols=207 Identities=17% Similarity=0.173 Sum_probs=108.4
Q ss_pred cCCcceEEEEeechhhHH----HHHHHHHHHhcCCCCCceeEEEeeCCCChHHH-H--HHHHHHHHHCC--CCEEEEeCC
Q psy10463 196 FLPKSSIVIVFHNEAWSA----LLRTVHSVISRSPRSMLKEILLVDDASTREFL-K--SSLDEYVAKLS--VPTRVIRSP 266 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~----l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~-~--~~l~~~~~~~~--~~v~~i~~~ 266 (605)
...+..|++|+|||.... |..+-+|+.+.... ..+.+.|.-|..+.+.. . +..-+++++.. .+|-|-+..
T Consensus 142 ~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~-~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr 220 (736)
T COG2943 142 DLHRTAILMPIYNEDVNRVFAGLRATYESLAATGHA-EHFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNIFYRRRR 220 (736)
T ss_pred cccceeEEeeccccCHHHHHHHHHHHHHHHHhhCCc-ccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCceeeehHh
Confidence 344588999999998433 45555566554333 33788777665443321 1 11223344443 245444444
Q ss_pred CCCChHHHHHHH--Hhh--ccCCEEEEecCCcccCcChHHHHHHHHHcCCcE-EEeeeEeeecCCeeEEecc--ccc-ce
Q psy10463 267 GRVGLIKARLLG--ARQ--AEGEILVFLDAHCECTLGWLENLVARVAEDRTR-VVCPVIDIISDVTFAYVRS--FEL-HW 338 (605)
Q Consensus 267 ~n~G~~~arN~G--~~~--A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~-vv~p~i~~i~~~~~~~~~~--~~~-~~ 338 (605)
+|.|--.+ |.+ .+. ...++.+.||+|..+..+.+-.|++.++.++.. ++...=..++.++. |... +.. ..
T Consensus 221 ~n~~RKaG-NIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~TL-~AR~qQFatrvY 298 (736)
T COG2943 221 RNVKRKAG-NIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGGDTL-YARCQQFATRVY 298 (736)
T ss_pred hhhccccc-CHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHhhCCCCceeecchhhcCcchH-HHHHHHHHHHHh
Confidence 43332111 111 111 246899999999999999999999999999873 32211112333332 1000 000 01
Q ss_pred eeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCc--ccccccc----hhhHHHHHHHHc
Q psy10463 339 GAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDE--EMQVWGG----ENLEMSFRVWQC 412 (605)
Q Consensus 339 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe--~~~~~g~----ED~dl~~Rl~~~ 412 (605)
|..-+ ....|+..+ -....|.+-.||.+.|-+.-|..+ +-..+|| -|+-=+.-+++.
T Consensus 299 Gpl~~-~GLawW~~~----------------Es~yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRa 361 (736)
T COG2943 299 GPLFT-AGLAWWQLG----------------ESHYWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRA 361 (736)
T ss_pred chHHh-hhhHHHhcc----------------ccccccccceeechhhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhc
Confidence 10000 000111111 124567777889999888765532 1111233 244445557788
Q ss_pred CCeEEEecce
Q psy10463 413 GGSIEIAPCS 422 (605)
Q Consensus 413 G~~i~~~p~s 422 (605)
|+.+.+.|+.
T Consensus 362 GW~v~ia~dL 371 (736)
T COG2943 362 GWGVWIAYDL 371 (736)
T ss_pred CceEEEeccC
Confidence 9998887754
|
|
| >PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.21 Score=44.01 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=46.7
Q ss_pred CcceEEEEeechhhHHHHHHHH---HHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVH---SVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~---sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~a 274 (605)
-++.||||.+|+. ..|...|. .++.+..- .+.|+||....+. .+..+.-
T Consensus 47 ~kvAiIIPyRdR~-~hL~~fl~~l~~~L~rQ~~--~y~I~vieQ~~~~-------------------------~FNRg~L 98 (136)
T PF13733_consen 47 HKVAIIIPYRDRE-EHLRIFLPHLHPFLQRQQL--DYRIFVIEQVDNG-------------------------PFNRGKL 98 (136)
T ss_dssp -EEEEEEEESS-H-HHHHHHHHHHHHHHHHTT---EEEEEEEEE-SSS----------------------------HHHH
T ss_pred cceEEEEEeCCHH-HHHHHHHHHHHHHHhhCcc--eEEEEEEeeccCC-------------------------CCchhhh
Confidence 4799999999998 66655444 45554432 3788888754322 1445666
Q ss_pred HHHHHhhc----cCCEEEEecCCcccCcCh
Q psy10463 275 RLLGARQA----EGEILVFLDAHCECTLGW 300 (605)
Q Consensus 275 rN~G~~~A----~gd~i~flD~D~~~~~~~ 300 (605)
.|.|...| .-|.++|-|-|..+..+.
T Consensus 99 ~NvGf~eA~~~~~~dc~ifHDVDllP~~~~ 128 (136)
T PF13733_consen 99 MNVGFLEALKDDDFDCFIFHDVDLLPENDR 128 (136)
T ss_dssp HHHHHHHHHHHS--SEEEEE-TTEEESBTT
T ss_pred hhHHHHHHhhccCCCEEEEecccccccCCC
Confidence 78887766 368999999998876543
|
... |
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
Probab=94.01 E-value=1.2 Score=52.19 Aligned_cols=196 Identities=10% Similarity=0.053 Sum_probs=111.2
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRa 441 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRA 441 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 459999999999754 446778899999999999877789999999999997665443 322221112211111111
Q ss_pred chHHHHHHHhhhccCceEEEec-CccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhc--CCCC----------
Q psy10463 162 GLIKARLLGARQAEGEILVFLD-AHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISR--SPRS---------- 228 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD-~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q--~~~~---------- 228 (605)
-.+- ... +.++. -| ...+...+|..- .++.+.++..|+++.+. ..+.
T Consensus 442 Pe~Y---Fs~---~~~~~--~~~~~~~F~~e~~~m------------KreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~ 501 (1094)
T PLN02436 442 PEWY---FSQ---KMDYL--KNKVHPAFVRERRAM------------KREYEEFKVKINALVATAQKVPEDGWTMQDGTP 501 (1094)
T ss_pred HHHH---hhc---cCCcc--cccCChhHHHHHHHH------------HHHHHHHHHHHHHHHhhcccCchhhhhhccCcc
Confidence 1000 000 00000 00 000010111100 01125566666666542 1110
Q ss_pred ----------CceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhhc----cCCEEEE
Q psy10463 229 ----------MLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQA----EGEILVF 289 (605)
Q Consensus 229 ----------~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~A----~gd~i~f 289 (605)
...+|++ |.....+ .. -..+| ++.|+..+++.| .++|+|.-++.+ .++||+-
T Consensus 502 W~g~~~~dHp~IIqVll-~~~~~~d-~~------g~~LP-~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILN 572 (1094)
T PLN02436 502 WPGNNVRDHPGMIQVFL-GHSGVRD-VE------GNELP-RLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLN 572 (1094)
T ss_pred CCCCCCCCCccceEEEe-cCCCCcc-cc------cccCc-eEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEe
Confidence 1123332 3211111 11 12366 889999999888 488999888754 7999999
Q ss_pred ecCCccc-CcChHHHHHHHHHcC
Q psy10463 290 LDAHCEC-TLGWLENLVARVAED 311 (605)
Q Consensus 290 lD~D~~~-~~~~L~~ll~~~~~~ 311 (605)
||.|... ++..+.+.+-.+-+.
T Consensus 573 LDCDmYiNns~a~r~AMCfllD~ 595 (1094)
T PLN02436 573 VDCDHYINNSKALREAMCFMMDP 595 (1094)
T ss_pred cccccccCchHHHHHhhhhhcCC
Confidence 9999976 788998888887653
|
|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.58 Score=54.72 Aligned_cols=203 Identities=11% Similarity=0.037 Sum_probs=112.1
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRa 432 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRA 432 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCC
Confidence 359999999999754 446677899999999999987889999999999997665543 222211111111111110
Q ss_pred chHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCC
Q psy10463 162 GLIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS 240 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S 240 (605)
-.+ -... +.++. -|. ..+...+|.. -.+..+.++..|+++.+..... ..|.....|++
T Consensus 433 Pe~---YFs~---~~~~~--~~~~~~~F~~e~~~------------mK~eYEe~k~RIe~l~~~~~~~-~~~~~~m~dgt 491 (1085)
T PLN02400 433 PEF---YFAQ---KIDYL--KDKIQPSFVKERRA------------MKREYEEFKVRINALVAKAQKI-PEEGWTMQDGT 491 (1085)
T ss_pred HHH---Hhcc---CCCcc--cCCCchhhHHHHHH------------HHHHHHHHHHHHHHHHhhhccC-CccccccccCc
Confidence 000 0000 00000 000 0000001100 0011256667777765322111 01222233443
Q ss_pred --------ChHHHHHHHHHH-------HHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCCccc
Q psy10463 241 --------TREFLKSSLDEY-------VAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAHCEC 296 (605)
Q Consensus 241 --------~d~~~~~~l~~~-------~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D~~~ 296 (605)
+.+.+-+++-+- -..+| .+.|+..+++.| .++|+|.-++. +.++||+-||.|..+
T Consensus 492 ~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP-~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~ 570 (1085)
T PLN02400 492 PWPGNNPRDHPGMIQVFLGHSGGLDTDGNELP-RLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYF 570 (1085)
T ss_pred cCCCCCCCCCchhhhhhhcCCCCcccccccCc-eeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEeccccccc
Confidence 112211111100 01355 788999999888 48899988774 489999999999998
Q ss_pred -CcChHHHHHHHHHcC
Q psy10463 297 -TLGWLENLVARVAED 311 (605)
Q Consensus 297 -~~~~L~~ll~~~~~~ 311 (605)
++..+.+.+-.+-+.
T Consensus 571 Nns~a~r~AMCf~lD~ 586 (1085)
T PLN02400 571 NNSKALKEAMCFMMDP 586 (1085)
T ss_pred CCchhHHhhhhheecc
Confidence 788888888777553
|
|
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.54 E-value=5.5 Score=39.56 Aligned_cols=189 Identities=14% Similarity=0.151 Sum_probs=111.1
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|.|+.+ .+.-+|..+...-- .+|+||-.--+....++.+.+ -+++..++.++.+++..|++.|.-.|-...
T Consensus 25 LlpV~~KP--mi~y~l~~L~~aGI----~dI~II~~~~~~~~~~~llGd-gs~~gv~itY~~Q~~p~GlA~Av~~a~~fv 97 (286)
T COG1209 25 LLPVYDKP--MIYYPLETLMLAGI----RDILIVVGPEDKPTFKELLGD-GSDFGVDITYAVQPEPDGLAHAVLIAEDFV 97 (286)
T ss_pred cceecCcc--hhHhHHHHHHHcCC----ceEEEEecCCchhhhhhhhcC-ccccCcceEEEecCCCCcHHHHHHHHHhhc
Confidence 46777765 67777777765432 477776433232322222211 123455899999999999999999999998
Q ss_pred c-CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhc
Q psy10463 283 E-GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKR 361 (605)
Q Consensus 283 ~-gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 361 (605)
. .+++++|.+..... =|++++..+.+...++......+-|+..|... ...-..+...+-
T Consensus 98 ~~~~f~l~LGDNi~~~--~l~~~~~~~~~~~~ga~i~~~~V~dP~rfGV~----------e~d~~~~v~~l~-------- 157 (286)
T COG1209 98 GDDDFVLYLGDNIFQD--GLSELLEHFAEEGSGATILLYEVDDPSRYGVV----------EFDEDGKVIGLE-------- 157 (286)
T ss_pred CCCceEEEecCceecc--ChHHHHHHHhccCCCcEEEEEEcCCcccceEE----------EEcCCCcEEEeE--------
Confidence 7 67777776555544 67888888776444333322223344433221 111000111111
Q ss_pred cCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEec
Q psy10463 362 KDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 362 ~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
..+..|- |.....|+.+++.++|+.+-..-+.-.. -.|=+|.--.....|..+....
T Consensus 158 EKP~~P~-SNlAvtGlY~~d~~Vf~~~~~ikPS~RG-ElEITd~i~~~i~~G~~~~~~~ 214 (286)
T COG1209 158 EKPKEPK-SNLAVTGLYFYDPSVFEAIKQIKPSARG-ELEITDAIDLYIEKGYLVVAIL 214 (286)
T ss_pred ECCCCCC-CceeEEEEEEeChHHHHHHHcCCCCCCC-ceEehHHHHHHHHcCcEEEEEE
Confidence 1112221 2334456788999999998776555443 2466788888889998876654
|
|
| >PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.52 Score=46.88 Aligned_cols=101 Identities=21% Similarity=0.155 Sum_probs=72.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceE-EEEeCCCchhhHHHHHHHHHHhcC---------CCeEEee
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEI-LLVDDASTREFLKSSLDEYVAKLS---------VPTRVIR 156 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~Ei-ivvdD~S~d~~~~~~~~~~~~~~~---------~~v~~~~ 156 (605)
..-|+|=|++|.-|.+ +++..-.+.+.+.+||.....| .+|.|.+..+.+.+.++++++... ..|.+++
T Consensus 22 ~~~e~VLILtplrna~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~ 100 (269)
T PF03452_consen 22 RNKESVLILTPLRNAA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILR 100 (269)
T ss_pred ccCCeEEEEEecCCch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEc
Confidence 4568899999999988 9999999999999999977777 666666644444455665554432 1355655
Q ss_pred cCCC--------------------cchHHHHHHHhhhcc---CceEEEecCcccc
Q psy10463 157 SPGR--------------------VGLIKARLLGARQAE---GEILVFLDAHCEC 188 (605)
Q Consensus 157 ~~~~--------------------~G~~~a~n~g~~~a~---g~~i~~lD~d~~~ 188 (605)
.+-. .-+++|||.-+..|- ..|++++|+|..-
T Consensus 101 ~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~ 155 (269)
T PF03452_consen 101 KDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVE 155 (269)
T ss_pred CCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCccc
Confidence 4321 113778888777774 5899999999853
|
These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes []. |
| >PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=93.38 E-value=0.13 Score=51.85 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=68.3
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHH----HHHCCCCEEEEeCCC--CCCh
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEY----VAKLSVPTRVIRSPG--RVGL 271 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~----~~~~~~~v~~i~~~~--n~G~ 271 (605)
..+.||||+-........+.-+.++. . +.+|||-|+...+.++ +.+-+ ..+.. -.+++-.+. ..--
T Consensus 8 ~~~divi~~~~~~l~~~~~~wr~~~~----~--~hliiv~d~~~~~~~~-~p~g~~~~~y~~~d-i~~~lg~~~~i~~~~ 79 (348)
T PF03214_consen 8 DEVDIVIPALRPNLTDFLEEWRPFFS----P--YHLIIVQDPDPNEEIK-VPEGFDYEVYNRND-IERVLGAKTLIPFKG 79 (348)
T ss_pred CcccEEeecccccHHHHHHHHHHhhc----c--eeEEEEeCCCcccccc-CCcccceeeecHhh-HHhhcCCcccccccc
Confidence 45789999988553344444455542 2 6888988875443221 00000 00000 001111111 1223
Q ss_pred HHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEee
Q psy10463 272 IKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 272 ~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
...||.|.-.|+-+|++++|+||.+..++.-..++.+.++.....+|
T Consensus 80 ~a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh~~~~~~~ 126 (348)
T PF03214_consen 80 DACRNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQHVENLSTP 126 (348)
T ss_pred cchhhhHhhhcccceEEEEccccccccCCccceehhhhccceeeecc
Confidence 56799999999999999999999999888888888887775554444
|
It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction |
| >PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.28 E-value=1.1 Score=42.60 Aligned_cols=161 Identities=11% Similarity=0.106 Sum_probs=85.0
Q ss_pred eeEEEeeCCCC--hHHHHHHHHHHHHHCCCCEEEEeCCCC-CChH----HHHHHHHhhcc-CCEEEEecCCcccCcChHH
Q psy10463 231 KEILLVDDAST--REFLKSSLDEYVAKLSVPTRVIRSPGR-VGLI----KARLLGARQAE-GEILVFLDAHCECTLGWLE 302 (605)
Q Consensus 231 ~eIIvVDd~S~--d~~~~~~l~~~~~~~~~~v~~i~~~~n-~G~~----~arN~G~~~A~-gd~i~flD~D~~~~~~~L~ 302 (605)
..++.|-..+. +..+.+.+.+-.+.+. .+-.+...+. .++. .+.+-+.++.. .+|++..|+|+.+.+.-|.
T Consensus 21 ~~~~FvvG~~~~~~~~~~~~l~~E~~~y~-Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~~~~v~k~DDD~~vn~~~l~ 99 (195)
T PF01762_consen 21 VKVVFVVGESPNSDSDLQEALQEEAEKYG-DILQGDFVDSYRNLTLKTLAGLKWASKHCPNAKYVLKVDDDVFVNPDRLV 99 (195)
T ss_pred EEEEEEEecCCCCcHHHHHHhhhhhhhcC-ceEeeecccccchhhHHHHHHHHHHHhhCCchhheeecCcEEEEehHHhh
Confidence 35555543333 4555555665566666 4433333221 2332 33334444444 7999999999999988877
Q ss_pred HHHHHH--HcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEE
Q psy10463 303 NLVARV--AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI 380 (605)
Q Consensus 303 ~ll~~~--~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i 380 (605)
..+... ......+.|..+. ...........|.. +.... ....-.|.+.|+++++
T Consensus 100 ~~L~~~~~~~~~~~~~g~~~~----------~~~~~r~~~~kw~v-------~~~~y-------~~~~yP~y~~G~~yvl 155 (195)
T PF01762_consen 100 SFLKSLKQDPSKNSIYGGCIK----------NGPPIRDPSSKWYV-------SEEEY-------PDDYYPPYCSGGGYVL 155 (195)
T ss_pred hhhhhcccCcccccccccccc----------CCccccccccCcee-------eeeec-------ccccCCCcCCCCeEEe
Confidence 777766 1122222222110 00000000111111 11111 1111234678999999
Q ss_pred eHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 381 DRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 381 ~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
++++...|...-.....+..||+-+..=+...|.+.
T Consensus 156 s~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~ 191 (195)
T PF01762_consen 156 SSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKP 191 (195)
T ss_pred cHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCc
Confidence 999999886543344444589998877666666543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane |
| >PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.98 Score=46.24 Aligned_cols=95 Identities=22% Similarity=0.274 Sum_probs=55.6
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
+-...||||+.||... .|+-||.--|.+ --||||-+.+. |.- -.+.+.++.......+-++++..
T Consensus 49 l~~maIVVP~KnE~l~----lleGVL~gIPh~--C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA 122 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKLK----LLEGVLSGIPHD--CLIIVVSNSSREPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLA 122 (381)
T ss_dssp HTTEEEEEEESS--HH----HHHHHHHCS-TT--SEEEEEE---CSSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHH
T ss_pred HhCcEEEEECCCCchh----hhhhhhhcCCCC--CeEEEEECCCCCCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHH
Confidence 4578999999999954 445555555444 47889988888 543 12344555554455566666543
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCccccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECT 189 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~~~ 189 (605)
+.|++-+...|+..| ..+|+-|+|+|...+
T Consensus 123 ~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiP 173 (381)
T PF09488_consen 123 EAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIP 173 (381)
T ss_dssp HHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-H
T ss_pred HHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCc
Confidence 567888888888777 579999999998664
|
Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A. |
| >PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.33 Score=51.62 Aligned_cols=101 Identities=18% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC-------
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG------- 159 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~------- 159 (605)
...|.+-|+|-+||.. .+|.+||+|++...+....+.|||-.||+...+ .+.+..| ...++++++..
T Consensus 90 ~~~~~~pVlV~AcNRp-~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~-~~vi~~y----~~~v~~i~~~~~~~i~~~ 163 (434)
T PF03071_consen 90 NKEPVIPVLVFACNRP-DYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEV-AEVIKSY----GDQVTYIQHPDFSPITIP 163 (434)
T ss_dssp -------EEEEESS-T-T-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHH-HHHHHGG----GGGSEEEE-S--S-----
T ss_pred cCCCcceEEEEecCCc-HHHHHHHHHHHHcCCCCCCccEEEEecCCcHHH-HHHHHHh----hhhheeeecCCcCCceeC
Confidence 3467789999999999 999999999999766554578999999998875 3333333 33344444321
Q ss_pred --C-c--c---hHHHHHHHhhh----ccCceEEEecCccccccccc
Q psy10463 160 --R-V--G---LIKARLLGARQ----AEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 160 --~-~--G---~~~a~n~g~~~----a~g~~i~~lD~d~~~~~~~~ 193 (605)
. . | ++.-.-.|+.. -..+.+++++-|.++.+++.
T Consensus 164 ~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf 209 (434)
T PF03071_consen 164 PKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFF 209 (434)
T ss_dssp TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHH
T ss_pred cccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHH
Confidence 1 0 1 11111223333 25678999999998887664
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.17 E-value=1.6 Score=49.18 Aligned_cols=108 Identities=18% Similarity=0.267 Sum_probs=67.4
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
.-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.+..+..-...++-++++..
T Consensus 54 ~~~~aivvp~k~e~~----~~~~gvl~~ip~~--c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~~~~~~vhq~dp~~a 127 (694)
T PRK14502 54 EKKMAIVLPIKDEDL----KVFEGVLSGIPHD--CLMIVISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELA 127 (694)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCchHHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 456889999999993 3445555555555 68888887664 3211 1244445443322455555432
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+.|.+.++-.|+..| ..+||-|+|+|..+ |+...+.+..+..+
T Consensus 128 ~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~-pg~v~ey~~~yaag 191 (694)
T PRK14502 128 NAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYI-PGAVWEYAKHFATG 191 (694)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCC-CchHHHHHHHHHhh
Confidence 345666677776555 45999999999988 56666666655443
|
|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
Probab=91.79 E-value=9 Score=39.08 Aligned_cols=184 Identities=14% Similarity=0.101 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC--CCCCChHHHHHHHHhhcc--CCEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS--PGRVGLIKARLLGARQAE--GEIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~--~~n~G~~~arN~G~~~A~--gd~i 287 (605)
+.+...++.+..... . .+|||+- .++.+ .++.... .++++.. ....|.+++. .|++... .|++
T Consensus 73 PLL~~vi~~a~~~~~-~--~~VVV~~---~~e~I----~~~~~~~--~v~vi~~~~~~~~GT~~~~-~a~~~l~~~~d~V 139 (293)
T PLN02917 73 PMIQRTWERAKLATT-L--DHIVVAT---DDERI----AECCRGF--GADVIMTSESCRNGTERCN-EALKKLEKKYDIV 139 (293)
T ss_pred EHHHHHHHHHHcCCC-C--CEEEEEC---ChHHH----HHHHHHc--CCEEEeCCcccCCchHHHH-HHHHhccCCCCEE
Confidence 456666666654332 2 2455542 22222 3333433 3555543 3445666653 5665543 6899
Q ss_pred EEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeEeeec-CCeeEEecccccce-eeeeccceeeEeecCchhHhhhccCC
Q psy10463 288 VFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVIDIIS-DVTFAYVRSFELHW-GAFNWELHFRWYTYGSSDAIIKRKDF 364 (605)
Q Consensus 288 ~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i~~i~-~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~ 364 (605)
+++++|.- +.+..|+.+++.+.++...++...+..++ ++.+.|..-..... .+. .+.|....++.. ++.
T Consensus 140 lil~gD~PlI~~~tI~~li~~~~~~~~~iv~t~~~~~~~~~~~~ygrv~vv~~~~g~--alyfsr~~Ipe~------kd~ 211 (293)
T PLN02917 140 VNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDASDPNRVKCVVDNQGY--AIYFSRGLIPYN------KSG 211 (293)
T ss_pred EEecCCcCCCCHHHHHHHHHHHHhcCCceEEEEeeecCHHHhcCCCceEEEECCCCe--EEEeecCcCCcC------CCc
Confidence 99999997 59999999999887655433322211111 11122211100000 000 011110101100 010
Q ss_pred C-CccccccccceEEEEeHHHHhHhCCCCcc-cc-cccchhhHHHHHHHHcCCeEEEec
Q psy10463 365 T-EPFKTPAMAGGLFAIDRAYFFHIGAYDEE-MQ-VWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 365 ~-~~~~~~~~~G~~~~i~r~~f~~iGgfDe~-~~-~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
. ..........|.++++++++..+...++. .. .++.||+ |+...|.++..++
T Consensus 212 ~~~~~~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl----~~le~G~~i~~~~ 266 (293)
T PLN02917 212 KVNPQFPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQL----KVLENGYKMKVIK 266 (293)
T ss_pred ccccccceEEEEEEEEeCHHHHHHHHcCCCCcccchhccHHH----HHHhCCCceEEEE
Confidence 0 00111245678999999998887766543 21 2334554 5789999987664
|
|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
Probab=91.73 E-value=2.3 Score=49.83 Aligned_cols=194 Identities=9% Similarity=0.035 Sum_probs=107.7
Q ss_pred CCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCcc
Q psy10463 88 FLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRVG 162 (605)
Q Consensus 88 ~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~G 162 (605)
.+|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.-
T Consensus 285 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaP 364 (1044)
T PLN02915 285 RLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAP 364 (1044)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCH
Confidence 49999999999754 446677899999999999877789999999999987665443 2222211111111111110
Q ss_pred hHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcC--CC------------
Q psy10463 163 LIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRS--PR------------ 227 (605)
Q Consensus 163 ~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~--~~------------ 227 (605)
.+- ... +.++. -|. ..+...+|..- .++.+.++..|+++.+.. .+
T Consensus 365 e~Y---Fs~---~~~~~--~~~~~~~F~~e~~~m------------KreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W 424 (1044)
T PLN02915 365 EFY---FSQ---KIDYL--KDKVQPTFVKERRAM------------KREYEEFKVRINALVAKAQKKPEEGWVMQDGTPW 424 (1044)
T ss_pred HHH---hcc---CCCcc--ccccCchhHHHHHHH------------HHHHHHHHHHHHHHHhhhccCCcccccccCCccC
Confidence 000 000 00000 000 00000011000 011255666666665331 00
Q ss_pred --------CCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhhc----cCCEEEEe
Q psy10463 228 --------SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQA----EGEILVFL 290 (605)
Q Consensus 228 --------~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~A----~gd~i~fl 290 (605)
....+|++ |+ +...... -..+| .+-|+..+++.| .++|+|.-++.+ .++||+-|
T Consensus 425 ~g~~~~dHp~IIqVll-~~-~~~~d~~------g~~lP-~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNl 495 (1044)
T PLN02915 425 PGNNTRDHPGMIQVYL-GS-EGALDVE------GKELP-RLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNL 495 (1044)
T ss_pred CCCCCCCCccceEEee-cC-CCCcccc------cCccc-eeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEee
Confidence 01123332 22 2210000 01366 888998898888 488899887765 79999999
Q ss_pred cCCccc-CcChHHHHHHHHHc
Q psy10463 291 DAHCEC-TLGWLENLVARVAE 310 (605)
Q Consensus 291 D~D~~~-~~~~L~~ll~~~~~ 310 (605)
|.|... ++..+.+.+-.+-+
T Consensus 496 DCDmY~Nns~a~r~AMCf~lD 516 (1044)
T PLN02915 496 DCDHYINNSKAVREAMCFLMD 516 (1044)
T ss_pred ccccccCcchhhHhhceeeec
Confidence 999987 67777776666544
|
|
| >COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.76 Score=44.87 Aligned_cols=96 Identities=11% Similarity=0.151 Sum_probs=60.7
Q ss_pred CCcEEEEEEeecCch-H-HHHHHHH--HHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcch-
Q psy10463 89 LPKSSIVIVFHNEAW-S-ALLRTVH--SVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL- 163 (605)
Q Consensus 89 ~p~~Siiip~yN~~~-~-~l~~~l~--sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~- 163 (605)
||.+++|||+--.+. . .-.+... +.+.--.+....++|+++.-+... ..+..|+...+ ++-++.......+
T Consensus 1 m~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d---~~i~~~i~~~~-~~~yl~~~s~~~F~ 76 (346)
T COG4092 1 MQPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD---RLIRSYIDPMP-RVLYLDFGSPEPFA 76 (346)
T ss_pred CCCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhHH---HHHHHHhcccc-ceEEEecCCCcccc
Confidence 577899999886542 1 1122222 222222334457999998887544 34666666554 4666665444444
Q ss_pred --HHHHHHHhhhcc----CceEEEecCcccc
Q psy10463 164 --IKARLLGARQAE----GEILVFLDAHCEC 188 (605)
Q Consensus 164 --~~a~n~g~~~a~----g~~i~~lD~d~~~ 188 (605)
+..+|.|+..+. .++++|+|.||-.
T Consensus 77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~ 107 (346)
T COG4092 77 SETICANNGADYSHEKCESNLVLFLDVDCFG 107 (346)
T ss_pred chhhhhhccchhhhccccccEEEEEeccccc
Confidence 456788888886 9999999999954
|
|
| >KOG1413|consensus | Back alignment and domain information |
|---|
Probab=91.65 E-value=1.8 Score=44.16 Aligned_cols=109 Identities=15% Similarity=0.134 Sum_probs=76.8
Q ss_pred ccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC------
Q psy10463 193 NEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP------ 266 (605)
Q Consensus 193 ~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~------ 266 (605)
+....|.+.||+-..|++ +.+.+++..++..-|....+.|||--|++..+ +++.+..|-+ .+..+.++
T Consensus 62 ~~~~~~v~pvvVf~csR~-~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~-vk~~~~~~g~----~v~~i~~~~h~~~e 135 (411)
T KOG1413|consen 62 LKNWPPVIPVVVFACSRA-DALRRHVKKLLEYRPSAEKFPIIVSQDCEKEA-VKKKLLSYGS----DVSHIQHPMHLKDE 135 (411)
T ss_pred ccCCCCceeEEEEecCcH-HHHHHHHHHHHHhCcchhhcCEEEeccCCcHH-HHHHHHHhcc----chhhhcCccccccc
Confidence 344577888999999999 99999999999988777767888888887665 4445555433 22222222
Q ss_pred -------C-CCC-------hHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHH
Q psy10463 267 -------G-RVG-------LIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 267 -------~-n~G-------~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
. ..| +-.|.|.....-+.+.++...+|....|++.+-....
T Consensus 136 i~v~~~~~k~~~Yy~IarHYkwAL~q~F~~~~~s~vii~eDDl~iapDFF~YF~~t 191 (411)
T KOG1413|consen 136 ISVPPRHKKFNAYYKIARHYKWALNQLFIVFRESRVIITEDDLNIAPDFFSYFRNT 191 (411)
T ss_pred cccCCcccccchhHHHHHHHHHHHhhHHhhcCCceeEEecchhhhhhHHHHHHHHH
Confidence 1 112 2344555565567889999999999999998887665
|
|
| >PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum | Back alignment and domain information |
|---|
Probab=91.49 E-value=1 Score=45.76 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=37.4
Q ss_pred eCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 264 RSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 264 ~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+...+.-++-.++.+. ..|+|++.|.+|+...|+|+..+...+..-
T Consensus 152 rsKq~lDya~Lm~y~~--~~~~YyL~LEDDVia~~~f~~~i~~~v~~~ 197 (297)
T PF04666_consen 152 RSKQNLDYAFLMNYCQ--NLGDYYLQLEDDVIAAPGFLSRIKRFVEAW 197 (297)
T ss_pred HHhhcccHHHHHHHHH--hcCCeEEEecCCeEechhHHHHHHHHHHHh
Confidence 3455677777777654 468899999999999999999999998764
|
N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane |
| >PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional | Back alignment and domain information |
|---|
Probab=91.44 E-value=13 Score=37.77 Aligned_cols=101 Identities=12% Similarity=0.192 Sum_probs=62.0
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|.++.+ .+...|.++....- .+|++|-.....+...+.+.+ ...++.++.++..+...|.+.|.-.|....
T Consensus 28 Llpv~gkP--mI~~~l~~l~~aGi----~~I~ii~~~~~~~~~~~~l~~-g~~~g~~i~y~~q~~~~Gta~Al~~a~~~i 100 (292)
T PRK15480 28 LLPIYDKP--MIYYPLSTLMLAGI----RDILIISTPQDTPRFQQLLGD-GSQWGLNLQYKVQPSPDGLAQAFIIGEEFI 100 (292)
T ss_pred EeEECCEE--HHHHHHHHHHHCCC----CEEEEEecCCchHHHHHHHcC-ccccCceeEEEECCCCCCHHHHHHHHHHHh
Confidence 56777764 67777777765422 488766443322222222211 122444688888888899999988888776
Q ss_pred cC-CEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 283 EG-EILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 283 ~g-d~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
.+ ++++++ +|..+...-+..+++...+.
T Consensus 101 ~~~~~~lv~-gD~i~~~~~l~~ll~~~~~~ 129 (292)
T PRK15480 101 GGDDCALVL-GDNIFYGHDLPKLMEAAVNK 129 (292)
T ss_pred CCCCEEEEE-CCeeeeccCHHHHHHHHHhC
Confidence 43 666655 55555444578888876543
|
|
| >TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | Back alignment and domain information |
|---|
Probab=91.43 E-value=5.1 Score=40.97 Aligned_cols=94 Identities=24% Similarity=0.307 Sum_probs=59.6
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
+-...||||+.||... .|+-|+.--|.+ --||||-+.+. |.- -.+.+..+..-....+-++++..
T Consensus 49 ~~~maIVVP~KdE~l~----lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~r~~i~vHQkDp~la 122 (381)
T TIGR02460 49 LGKTAIVVPVKNEKLH----LLEGVLSGIPHE--CPIIIVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALA 122 (381)
T ss_pred HhCcEEEEEcCCCchh----HHhhHhhcCCCC--CeEEEEeCCCCCChhHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 4568999999999954 445555554443 36788887776 321 12233344333334455554432
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCcccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCEC 188 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~~ 188 (605)
+.|++-+...|+..| ..+|+-|+|+|...
T Consensus 123 ~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyi 172 (381)
T TIGR02460 123 EAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYF 172 (381)
T ss_pred HHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCC
Confidence 467777777887776 57999999999844
|
This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase. |
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
Probab=91.40 E-value=14 Score=35.43 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH---CCCCEEEEeCCCCCChHHHHHHHHhhccCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LSVPTRVIRSPGRVGLIKARLLGARQAEGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~---~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~ 288 (605)
+.+...+..+.+.. ..+|+|+-+... +. +.++... ++..+.+.......|.+.+.-.|++....+.++
T Consensus 30 pli~~~l~~l~~~g----~~~v~vv~~~~~-~~----i~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~~~~~~~~l 100 (223)
T cd06915 30 PFLEYLLEYLARQG----ISRIVLSVGYLA-EQ----IEEYFGDGYRGGIRIYYVIEPEPLGTGGAIKNALPKLPEDQFL 100 (223)
T ss_pred chHHHHHHHHHHCC----CCEEEEEcccCH-HH----HHHHHcCccccCceEEEEECCCCCcchHHHHHHHhhcCCCCEE
Confidence 46777777766542 136777654322 22 2223322 122355566566788888888888877678899
Q ss_pred EecCCcccCcChHHHHHHHHHcCCc
Q psy10463 289 FLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 289 flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
++++|..++. .+..+++.+.+...
T Consensus 101 v~~~D~~~~~-~~~~~l~~~~~~~~ 124 (223)
T cd06915 101 VLNGDTYFDV-DLLALLAALRASGA 124 (223)
T ss_pred EEECCcccCC-CHHHHHHHHHhCCC
Confidence 9999997754 46778777655433
|
WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars. |
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=91.34 E-value=5.6 Score=46.96 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=47.1
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHH
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLD 142 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~ 142 (605)
.++|.|.|.|++-+. ..-....||-||++-.||....-+-|-|||.+.-|.....+
T Consensus 364 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 364 SDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred ccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 359999999999754 44567789999999999998788999999999999766554
|
|
| >PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [] | Back alignment and domain information |
|---|
Probab=90.50 E-value=1.2 Score=44.84 Aligned_cols=118 Identities=16% Similarity=0.066 Sum_probs=83.5
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEe-------CCCC--C
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR-------SPGR--V 269 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~-------~~~n--~ 269 (605)
..|-.|-+.||+ .+|.++|+|++..- .|.|+.=|.|+|++ ++++.++++++|.-+.+.. ++.. .
T Consensus 88 ~~~~~iRvKnE~-~tl~~si~S~Lpai-----~~gVI~yNdc~D~t-~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n 160 (347)
T PF06306_consen 88 NPWAFIRVKNEA-MTLAESIESILPAI-----DEGVIGYNDCTDGT-EEIILEFCKKYPSFIPIKYPYEVIIKNPKSEEN 160 (347)
T ss_pred CcceEEEEcchh-hhHHHHHHHHHHHH-----hccEEEeecCCCCH-HHHHHHHHHhCcccccccCcchhhccCCchhhh
Confidence 478899999999 99999999999533 58888888889885 6789999999985444321 1110 1
Q ss_pred ChHHHHHHHHhhc-cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeee
Q psy10463 270 GLIKARLLGARQA-EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDII 323 (605)
Q Consensus 270 G~~~arN~G~~~A-~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i 323 (605)
-+..=.|.++... +.+|++=+|+|-+..+.-|-...=...+....+..+.|+..
T Consensus 161 ~l~~YYNy~ls~ipk~~w~iKID~DhIy~~~KL~ksfY~pk~~~~~v~YsRINF~ 215 (347)
T PF06306_consen 161 SLYNYYNYVLSFIPKNEWAIKIDADHIYDTKKLYKSFYIPKNDYDVVSYSRINFH 215 (347)
T ss_pred hhhhhhhhhhcccccceEEEEeccceeecHHHHhhhheeeccccceEEecceeEE
Confidence 1333356666663 68999999999998887664444444555567777877643
|
|
| >cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis | Back alignment and domain information |
|---|
Probab=90.40 E-value=1.9 Score=41.55 Aligned_cols=98 Identities=17% Similarity=0.255 Sum_probs=61.4
Q ss_pred CcceEEEEeechhh--HHHHHHHHHHHhcCCCCCceeEEEeeCCC-ChHHHHHHHHHHHHHCCCCEEEEeCCCC------
Q psy10463 198 PKSSIVIVFHNEAW--SALLRTVHSVISRSPRSMLKEILLVDDAS-TREFLKSSLDEYVAKLSVPTRVIRSPGR------ 268 (605)
Q Consensus 198 p~vSVIIp~~n~~~--~~l~~~l~sl~~q~~~~~~~eIIvVDd~S-~d~~~~~~l~~~~~~~~~~v~~i~~~~n------ 268 (605)
|.+-||-|||.+.. ..|.+.-+.+. .-+ + .--|||+|+. ..+. ..++.++.+...+.+..+.+
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~-lVp-~--l~WIVVEd~~~~t~~----va~lL~~sgl~y~HL~~~~~~~~~~~ 72 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLR-LVP-P--LHWIVVEDSEEKTPL----VAELLRRSGLMYTHLNAKTPSDPTWL 72 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHh-cCC-c--eEEEEEeCCCCCCHH----HHHHHHHcCCceEEeccCCCCCcccC
Confidence 45678889999872 23444444443 333 3 5789999987 3332 44555665545555544432
Q ss_pred --CChHHHHHHHHhhc-------cCCEEEEecCCcccCcChHHHH
Q psy10463 269 --VGLIKARLLGARQA-------EGEILVFLDAHCECTLGWLENL 304 (605)
Q Consensus 269 --~G~~~arN~G~~~A-------~gd~i~flD~D~~~~~~~L~~l 304 (605)
.| ...||.|++.- ..-++.|.|+|...+-..+++|
T Consensus 73 ~~rg-~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~em 116 (223)
T cd00218 73 KPRG-VEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEM 116 (223)
T ss_pred Cccc-HHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHH
Confidence 33 45699998654 3358999999998877666663
|
Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
Probab=90.38 E-value=2.7 Score=41.32 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=67.1
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC---CCEEEEeCCCCCChHHHHHHHHh
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS---VPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~---~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
+|..+.. +.+...|+.+.+... .++|+|-.+..... +.++..... .++.++..+...|.+.|.-.+..
T Consensus 25 l~i~g~~-pli~~~l~~l~~~g~----~~ii~V~~~~~~~~----i~~~~~~~~~~~~~i~~i~~~~~~Gta~al~~a~~ 95 (248)
T PF00483_consen 25 LPIGGKY-PLIDYVLENLANAGI----KEIIVVVNGYKEEQ----IEEHLGSGYKFGVKIEYIVQPEPLGTAGALLQALD 95 (248)
T ss_dssp SEETTEE-EHHHHHHHHHHHTTC----SEEEEEEETTTHHH----HHHHHTTSGGGTEEEEEEEESSSSCHHHHHHHTHH
T ss_pred ceecCCC-cchhhhhhhhcccCC----ceEEEEEeeccccc----ccccccccccccccceeeecccccchhHHHHHHHH
Confidence 3455664 577777777776433 47555544443332 444444332 24888888888999999999988
Q ss_pred hccCCE----EEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 281 QAEGEI----LVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 281 ~A~gd~----i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
....+. ++++.+|..... -+..+++...+...
T Consensus 96 ~i~~~~~~~~~lv~~gD~i~~~-~~~~~l~~~~~~~~ 131 (248)
T PF00483_consen 96 FIEEEDDDEDFLVLNGDIIFDD-DLQDMLEFHRESNA 131 (248)
T ss_dssp HHTTSEE-SEEEEETTEEEEST-THHHHHHHHHHHSS
T ss_pred HhhhccccceEEEEeccccccc-hhhhHHHhhhcccc
Confidence 887765 899999998877 56777777665444
|
; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C .... |
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
Probab=90.34 E-value=18 Score=35.59 Aligned_cols=183 Identities=13% Similarity=0.109 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC--CCCCChHHHHHHHHhh---ccCCE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS--PGRVGLIKARLLGARQ---AEGEI 286 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~--~~n~G~~~arN~G~~~---A~gd~ 286 (605)
+.+..+++.+... .. .+|+|+-| ++. +.+..+.++ ++++.. ....|..+.. .+++. ...++
T Consensus 25 Pli~~~le~~~~~-~~---d~VvVvt~---~~~----i~~~~~~~g--~~~v~~~~~~~~Gt~r~~-~~~~~l~~~~~d~ 90 (238)
T TIGR00466 25 PMIVHVAENANES-GA---DRCIVATD---DES----VAQTCQKFG--IEVCMTSKHHNSGTERLA-EVVEKLALKDDER 90 (238)
T ss_pred CHHHHHHHHHHhC-CC---CeEEEEeC---HHH----HHHHHHHcC--CEEEEeCCCCCChhHHHH-HHHHHhCCCCCCE
Confidence 5677777776543 22 47777643 222 233344443 444432 2333432222 22222 25689
Q ss_pred EEEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeEeeec------CCeeEEecccccceeeeeccceeeEeec--CchhH
Q psy10463 287 LVFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVIDIIS------DVTFAYVRSFELHWGAFNWELHFRWYTY--GSSDA 357 (605)
Q Consensus 287 i~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i~~i~------~~~~~~~~~~~~~~g~~~~~l~~~~~~~--~~~~~ 357 (605)
++++|+|.- ++++.++.+++.+.+....++++.+...+ +++....... .|. .+.|..... .....
T Consensus 91 Vli~~gD~Pli~~~~I~~li~~~~~~~~~~a~~~~~~~d~~~~~~p~~vk~v~~~---~g~---alyfsr~~ip~~R~~~ 164 (238)
T TIGR00466 91 IVNLQGDEPFIPKEIIRQVADNLATKNVPMAALAVKIHDAEEAFNPNAVKVVLDS---QGY---ALYFSRSLIPFDRDFF 164 (238)
T ss_pred EEEEcCCcCcCCHHHHHHHHHHHhcCCCCEEEEeeecCCHHHccCCCceEEEeCC---CCe---EEEecCCCCCCCCCcc
Confidence 999999997 69999999999986544444444443333 2232222100 010 000100000 00000
Q ss_pred hhhccCCCCcccc-ccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEec
Q psy10463 358 IIKRKDFTEPFKT-PAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 358 ~~~~~~~~~~~~~-~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
. ....|... -...-|..+++++++.+.-...+...- -.|.+|. +|+...|++|.+..
T Consensus 165 ~----~~~tpq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le-~~e~leq-lr~le~g~~i~~~~ 222 (238)
T TIGR00466 165 A----KRQTPVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLE-EIEKLEQ-LRVLYYGEKIHVKI 222 (238)
T ss_pred c----ccccccccceeEEEEEEeCCHHHHHHHHhCCCCccc-ccchhHH-HhhhhcCCceEEEE
Confidence 0 00011100 012347889999999997766554322 3688886 89999999997764
|
|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
Probab=90.26 E-value=1.8 Score=39.36 Aligned_cols=95 Identities=19% Similarity=0.318 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC-CCCChHHHHHHHHhhc-cCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP-GRVGLIKARLLGARQA-EGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~-~n~G~~~arN~G~~~A-~gd~i~f 289 (605)
+.+..+++.+.+... .+|+||-.. +. +....... +++++.++ ...|...+.-.|+... ..+.+++
T Consensus 25 ~li~~~l~~l~~~~~----~~Ivvv~~~--~~-----~~~~~~~~--~~~~v~~~~~~~G~~~sl~~a~~~~~~~~~vlv 91 (160)
T PF12804_consen 25 PLIERVLEALREAGV----DDIVVVTGE--EE-----IYEYLERY--GIKVVVDPEPGQGPLASLLAALSQLPSSEPVLV 91 (160)
T ss_dssp EHHHHHHHHHHHHTE----SEEEEEEST--HH-----HHHHHTTT--TSEEEE-STSSCSHHHHHHHHHHTSTTSSEEEE
T ss_pred cHHHHHHHHhhccCC----ceEEEecCh--HH-----HHHHHhcc--CceEEEeccccCChHHHHHHHHHhcccCCCcEE
Confidence 577777777765532 378887554 22 22223332 57877775 3589999999999998 8999999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEEEeee
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRVVCPV 319 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~ 319 (605)
+..|.. ++++.++.+++.+.+++..++.+.
T Consensus 92 ~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~ 122 (160)
T PF12804_consen 92 LPCDQPFLSPELLRRLLEALEKSPADIVVPV 122 (160)
T ss_dssp EETTETTS-HHHHHHHHHHHHHTTTSEEEEE
T ss_pred EeCCccccCHHHHHHHHHHHhccCCcEEEEE
Confidence 999995 599999999999987666665544
|
... |
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
Probab=89.78 E-value=8.8 Score=37.44 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccC--CEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEG--EILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~g--d~i~f 289 (605)
+.+...+.++.+..- .+|+||-.... +.+.+.+.++....+..+.+.......|.+.+...+...... +-+++
T Consensus 32 pli~~~l~~l~~~g~----~~v~iv~~~~~-~~~~~~l~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~~~lv 106 (233)
T cd06425 32 PMIEHQIEALAKAGV----KEIILAVNYRP-EDMVPFLKEYEKKLGIKITFSIETEPLGTAGPLALARDLLGDDDEPFFV 106 (233)
T ss_pred chHHHHHHHHHHCCC----cEEEEEeeeCH-HHHHHHHhcccccCCeEEEeccCCCCCccHHHHHHHHHHhccCCCCEEE
Confidence 577778888776532 36666544322 223333333322222223333345567888888877776543 33566
Q ss_pred ecCCcccCcChHHHHHHHHHcCCc
Q psy10463 290 LDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 290 lD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
+++|.....+ +..+++...+...
T Consensus 107 ~~~D~~~~~~-~~~~~~~~~~~~~ 129 (233)
T cd06425 107 LNSDVICDFP-LAELLDFHKKHGA 129 (233)
T ss_pred EeCCEeeCCC-HHHHHHHHHHcCC
Confidence 6899887766 5888887765544
|
GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation. |
| >PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2 | Back alignment and domain information |
|---|
Probab=89.70 E-value=6.6 Score=40.75 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=36.7
Q ss_pred ceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHH-----cCCeEEEecceEEEEEcc
Q psy10463 375 GGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQ-----CGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 375 G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~-----~G~~i~~~p~s~v~H~~r 429 (605)
.-.|++.|++|.+|-..-+.|=-|.--++|+++-... ...++.+.-.++|.|+..
T Consensus 233 NmGmAfNRs~W~kI~~ca~~FC~yDDYNWDwSL~~ls~~cl~~~~kvL~~~~PRV~HiGd 292 (356)
T PF05060_consen 233 NMGMAFNRSTWNKIKSCADEFCTYDDYNWDWSLQHLSQRCLPSPLKVLVPKGPRVFHIGD 292 (356)
T ss_pred cceeEecHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhccCCccEEEEEccCcEEEccc
Confidence 3468999999999976655554443445666665332 245566667788999853
|
4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane |
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=89.39 E-value=1.1 Score=43.40 Aligned_cols=88 Identities=14% Similarity=0.261 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCChHHHHHHHHhhccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGLIKARLLGARQAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~~~arN~G~~~A~gd~i~f 289 (605)
+.+.++|+++....- .|+++|-+|-.. +.++++.++++...+++.++. ..+-....-.|.....++ ++.
T Consensus 32 ~ii~~~i~~L~~~gi----~e~vvV~~g~~~----~lve~~l~~~~~~~~iv~N~~y~ktN~~~Sl~~akd~~~~~-fii 102 (239)
T COG1213 32 EIIYRTIENLAKAGI----TEFVVVTNGYRA----DLVEEFLKKYPFNAKIVINSDYEKTNTGYSLLLAKDYMDGR-FIL 102 (239)
T ss_pred EeHHHHHHHHHHcCC----ceEEEEeccchH----HHHHHHHhcCCcceEEEeCCCcccCCceeEEeeehhhhcCc-EEE
Confidence 568889998887653 489999777543 367888888887888888765 122233345666777777 677
Q ss_pred ecCCcccCcChHHHHHHHH
Q psy10463 290 LDAHCECTLGWLENLVARV 308 (605)
Q Consensus 290 lD~D~~~~~~~L~~ll~~~ 308 (605)
+++|...+|..++.++++-
T Consensus 103 ~~sD~vye~~~~e~l~~a~ 121 (239)
T COG1213 103 VMSDHVYEPSILERLLEAP 121 (239)
T ss_pred EeCCEeecHHHHHHHHhCc
Confidence 8999999999999998865
|
|
| >PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.14 E-value=11 Score=38.95 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=59.1
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
+-...||||+.||... .|+-||.--|.+ --||||-+.+. |.- -.+.+..+..-....+.++++..
T Consensus 50 ~~~mAIVVP~KdE~l~----lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la 123 (393)
T PRK14503 50 LGRMAIVVPVKNERLK----LLEGVLKGIPHE--CPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLA 123 (393)
T ss_pred HhCcEEEEEcCCCchh----HHhhHhhcCCCC--CeEEEEeCCCCCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHH
Confidence 4568999999999954 445555554443 36777777765 321 12233344333334455554432
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCcccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCEC 188 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~~ 188 (605)
+.|++-+...|+..| ..+|+-|+|+|..+
T Consensus 124 ~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyi 173 (393)
T PRK14503 124 EALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYI 173 (393)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCC
Confidence 467777777887776 57999999999844
|
|
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.01 E-value=17 Score=35.70 Aligned_cols=94 Identities=11% Similarity=0.139 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh--hccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR--QAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~--~A~gd~i~f 289 (605)
+.|...+..+... .. .+|+|+-+. +. +.++...++..+.+...+...|.+.+...... ....+.+++
T Consensus 28 pll~~~l~~l~~~-~i---~~ivvv~~~---~~----i~~~~~~~~~~v~~~~~~~~~gt~~~~~~~~~~~~~~~~~vlv 96 (245)
T PRK05450 28 PMIVRVYERASKA-GA---DRVVVATDD---ER----IADAVEAFGGEVVMTSPDHPSGTDRIAEAAAKLGLADDDIVVN 96 (245)
T ss_pred CHHHHHHHHHHhc-CC---CeEEEECCc---HH----HHHHHHHcCCEEEECCCcCCCchHHHHHHHHhcCCCCCCEEEE
Confidence 4667777766654 21 477776431 21 33334444423333233444454443332211 124688999
Q ss_pred ecCCc-ccCcChHHHHHHHHHcCCcEEE
Q psy10463 290 LDAHC-ECTLGWLENLVARVAEDRTRVV 316 (605)
Q Consensus 290 lD~D~-~~~~~~L~~ll~~~~~~~~~vv 316 (605)
+++|. .++++.++.+++....++..++
T Consensus 97 ~~~D~Pli~~~~l~~li~~~~~~~~~~~ 124 (245)
T PRK05450 97 VQGDEPLIPPEIIDQVAEPLANPEADMA 124 (245)
T ss_pred ecCCCCCCCHHHHHHHHHHHhcCCCCeE
Confidence 99999 5799999999998876544333
|
|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
Probab=88.51 E-value=4.6 Score=37.55 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC-CCCChHHHHHHHHhhcc--CCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP-GRVGLIKARLLGARQAE--GEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~-~n~G~~~arN~G~~~A~--gd~i~ 288 (605)
..+...++.+... .. .+|+||-+.. ... ........ .+.++..+ ...|...+...|++.+. .++++
T Consensus 27 ~li~~~i~~l~~~-~~---~~i~vv~~~~-~~~----~~~~~~~~--~~~~~~~~~~~~G~~~~i~~al~~~~~~~~~vl 95 (186)
T cd04182 27 PLLRHALDAALAA-GL---SRVIVVLGAE-ADA----VRAALAGL--PVVVVINPDWEEGMSSSLAAGLEALPADADAVL 95 (186)
T ss_pred eHHHHHHHHHHhC-CC---CcEEEECCCc-HHH----HHHHhcCC--CeEEEeCCChhhCHHHHHHHHHHhccccCCEEE
Confidence 4666777776654 11 3676664322 111 12222222 35555544 33688888888988876 79999
Q ss_pred EecCCcc-cCcChHHHHHHHHHcCCcEEEeee
Q psy10463 289 FLDAHCE-CTLGWLENLVARVAEDRTRVVCPV 319 (605)
Q Consensus 289 flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~ 319 (605)
++.+|.. +++..++.+++.+..++..++.|.
T Consensus 96 v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 127 (186)
T cd04182 96 ILLADQPLVTAETLRALIDAFREDGAGIVAPV 127 (186)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 9999994 688999999998876555555543
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [] | Back alignment and domain information |
|---|
Probab=88.38 E-value=1.3 Score=44.59 Aligned_cols=91 Identities=16% Similarity=0.107 Sum_probs=69.4
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEee-------cCC--Cc
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR-------SPG--RV 161 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~-------~~~--~~ 161 (605)
-.|-.|=+.||+ .+|.++|+|++... .|+||.=+-|+|+| ++++.++.++++.-+.+.. ++. ..
T Consensus 88 ~~~~~iRvKnE~-~tl~~si~S~Lpai-----~~gVI~yNdc~D~t-~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n 160 (347)
T PF06306_consen 88 NPWAFIRVKNEA-MTLAESIESILPAI-----DEGVIGYNDCTDGT-EEIILEFCKKYPSFIPIKYPYEVIIKNPKSEEN 160 (347)
T ss_pred CcceEEEEcchh-hhHHHHHHHHHHHH-----hccEEEeecCCCCH-HHHHHHHHHhCcccccccCcchhhccCCchhhh
Confidence 368899999999 99999999999665 78888888889999 7889999999987655422 111 11
Q ss_pred chHHHHHHHhhhc-cCceEEEecCcccc
Q psy10463 162 GLIKARLLGARQA-EGEILVFLDAHCEC 188 (605)
Q Consensus 162 G~~~a~n~g~~~a-~g~~i~~lD~d~~~ 188 (605)
-+..=.|.++..- +.+|++=+|+|-..
T Consensus 161 ~l~~YYNy~ls~ipk~~w~iKID~DhIy 188 (347)
T PF06306_consen 161 SLYNYYNYVLSFIPKNEWAIKIDADHIY 188 (347)
T ss_pred hhhhhhhhhhcccccceEEEEeccceee
Confidence 2344457777774 58999999998743
|
|
| >PLN02458 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=88.36 E-value=2.8 Score=42.58 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=62.4
Q ss_pred CCcceEEEEeec-hhh--HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC---
Q psy10463 197 LPKSSIVIVFHN-EAW--SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG--- 270 (605)
Q Consensus 197 ~p~vSVIIp~~n-~~~--~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G--- 270 (605)
.+.+=||.|||. +.. ..|.+.-+.+ ..-+++ .--|||+|++.-.. ..++.++.+...+.+..+.+..
T Consensus 111 ~rlIivVTPTY~rR~~Q~a~LTRLahTL-~lVp~p--L~WIVVEd~~~t~~----va~lLrrsGl~y~HL~~k~~~~~~~ 183 (346)
T PLN02458 111 RRLVIIVTPISTKDRYQGVLLRRLANTL-RLVPPP--LLWIVVEGQSDSEE----VSEMLRKTGIMYRHLVFKENFTDPE 183 (346)
T ss_pred CceEEEECCCCCCcchhHHHHHHHHHHH-hcCCCC--ceEEEEeCCCCCHH----HHHHHHHcCCceEEeccCCCCCCcc
Confidence 456778889998 331 2344444433 344444 47888988775443 4455666554555555444431
Q ss_pred --hHHHHHHHHhhcc----CCEEEEecCCcccCcChHHHH
Q psy10463 271 --LIKARLLGARQAE----GEILVFLDAHCECTLGWLENL 304 (605)
Q Consensus 271 --~~~arN~G~~~A~----gd~i~flD~D~~~~~~~L~~l 304 (605)
....||.|++.-+ .-+|.|.|+|...+-+.+++|
T Consensus 184 ~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEm 223 (346)
T PLN02458 184 AELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEI 223 (346)
T ss_pred chhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHH
Confidence 2345999987663 468999999988776666553
|
|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=88.28 E-value=35 Score=35.88 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=70.6
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH---CCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~---~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
+|.-|.+ .+...|.++.++.- .||+++ -+.. .+.++++... ++.++.++......|-++|.-.+..
T Consensus 27 lpI~gkP--ii~~~l~~L~~~Gv----~eivi~-~~y~----~~~i~~~~~d~~~~~~~I~y~~e~~~lGTag~l~~a~~ 95 (358)
T COG1208 27 LPIAGKP--LIEYVLEALAAAGV----EEIVLV-VGYL----GEQIEEYFGDGEGLGVRITYVVEKEPLGTAGALKNALD 95 (358)
T ss_pred ceeCCcc--HHHHHHHHHHHCCC----cEEEEE-eccc----hHHHHHHHhcccccCCceEEEecCCcCccHHHHHHHHH
Confidence 3444553 67777777766432 477777 3333 3344555543 3458999999999999999888888
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
.-.++-+++++.|...+-+ |..+++..++.
T Consensus 96 ~l~~~~f~v~~GDv~~~~d-l~~l~~~~~~~ 125 (358)
T COG1208 96 LLGGDDFLVLNGDVLTDLD-LSELLEFHKKK 125 (358)
T ss_pred hcCCCcEEEEECCeeeccC-HHHHHHHHHhc
Confidence 8887888899999999988 99999988877
|
|
| >TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form | Back alignment and domain information |
|---|
Probab=88.11 E-value=23 Score=35.92 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=59.9
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|.++.+ .+...|..+..... .+|+||-.....+...+.+.. ...++.++.++..++..|.+.|.-.|...-
T Consensus 24 Llpv~gkP--mI~~~L~~l~~aGi----~~I~iv~~~~~~~~~~~~lg~-g~~~g~~i~~~~q~~~~Gta~al~~a~~~l 96 (286)
T TIGR01207 24 LLPIYDKP--MIYYPLSTLMLAGI----RDILIISTPQDTPRFQQLLGD-GSQWGVNLSYAVQPSPDGLAQAFIIGEDFI 96 (286)
T ss_pred eeEECCEE--hHHHHHHHHHHCCC----CEEEEEecCCcHHHHHHHhcc-ccccCceEEEEEccCCCCHHHHHHHHHHHh
Confidence 56777764 66667776665432 477766432222222222211 112344677888878899999988888775
Q ss_pred c-CCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 283 E-GEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 283 ~-gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
. .++++++ .|..+...-+..+++...+.
T Consensus 97 ~~~~~~li~-gD~i~~~~~l~~ll~~~~~~ 125 (286)
T TIGR01207 97 GGDPSALVL-GDNIFYGHDLSDLLKRAAAR 125 (286)
T ss_pred CCCCEEEEE-CCEeccccCHHHHHHHHHhc
Confidence 4 4566555 66555555677888766543
|
This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. |
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
Probab=87.54 E-value=12 Score=37.14 Aligned_cols=103 Identities=14% Similarity=0.193 Sum_probs=60.2
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA- 282 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A- 282 (605)
+|+-++ +.|...|.++.+.... .+|+||-.... +.+.+.+.+........+.++...+..|.+.|.-.+...-
T Consensus 26 lpv~g~--plI~~~l~~l~~~~gi---~~i~iv~~~~~-~~i~~~l~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~ 99 (257)
T cd06428 26 FPVAGK--PMIHHHIEACAKVPDL---KEVLLIGFYPE-SVFSDFISDAQQEFNVPIRYLQEYKPLGTAGGLYHFRDQIL 99 (257)
T ss_pred CeECCe--eHHHHHHHHHHhcCCC---cEEEEEecCCH-HHHHHHHHhcccccCceEEEecCCccCCcHHHHHHHHHHhh
Confidence 444454 4677777777653222 37777754332 2233333322222233466666666788887766555442
Q ss_pred --cCCEEEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 283 --EGEILVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 283 --~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
..+.++++.+|.....+ +..+++...+...
T Consensus 100 ~~~~~~~lv~~gD~~~~~d-l~~~~~~h~~~~~ 131 (257)
T cd06428 100 AGNPSAFFVLNADVCCDFP-LQELLEFHKKHGA 131 (257)
T ss_pred ccCCCCEEEEcCCeecCCC-HHHHHHHHHHcCC
Confidence 24677889999987665 7888887766543
|
N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre |
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
Probab=87.43 E-value=5.3 Score=37.34 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-CCChHHHHHHHHh-hccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIKARLLGAR-QAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-n~G~~~arN~G~~-~A~gd~i~f 289 (605)
+.+...++.+.+... .+||||-+...+. ..+.+...+ .+.++..+. ..|...+...|++ ....+.+++
T Consensus 26 pll~~~i~~l~~~~~----~~iivv~~~~~~~----~~~~~~~~~--~v~~v~~~~~~~g~~~si~~~l~~~~~~~~vlv 95 (188)
T TIGR03310 26 TILEHVVDNALRLFF----DEVILVLGHEADE----LVALLANHS--NITLVHNPQYAEGQSSSIKLGLELPVQSDGYLF 95 (188)
T ss_pred eHHHHHHHHHHHcCC----CcEEEEeCCcHHH----HHHHhccCC--CeEEEECcChhcCHHHHHHHHhcCCCCCCEEEE
Confidence 567777777765421 3666653322221 223332222 477766543 3577777777877 456789999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEEEee
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
+++|.. +.++.++.+++.+..++..++.|
T Consensus 96 ~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~ 125 (188)
T TIGR03310 96 LLGDQPFVTPDIIQLLLEAFALKNDEIVVP 125 (188)
T ss_pred EeCCcCCCCHHHHHHHHHHHHhCCCcEEEe
Confidence 999985 68999999999877666555554
|
Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate. |
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
Probab=86.88 E-value=27 Score=34.01 Aligned_cols=87 Identities=14% Similarity=0.207 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC--CCCChHHHHHHHHhhccC--CEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP--GRVGLIKARLLGARQAEG--EIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~--~n~G~~~arN~G~~~A~g--d~i 287 (605)
+.+...++.+...... .+|+|+-+ .+ .+.++...++ ++++... ...|.+.+. .++..... +.+
T Consensus 27 pll~~~l~~l~~~~~i---~~ivvv~~---~~----~i~~~~~~~~--~~~~~~~~~~~~gt~~~~-~~~~~~~~~~d~v 93 (239)
T cd02517 27 PMIQHVYERAKKAKGL---DEVVVATD---DE----RIADAVESFG--GKVVMTSPDHPSGTDRIA-EVAEKLDADDDIV 93 (239)
T ss_pred CHHHHHHHHHHhCCCC---CEEEEECC---cH----HHHHHHHHcC--CEEEEcCcccCchhHHHH-HHHHhcCCCCCEE
Confidence 4667777766654221 47777633 12 2334444443 4554432 234555433 34444444 889
Q ss_pred EEecCCc-ccCcChHHHHHHHHHcC
Q psy10463 288 VFLDAHC-ECTLGWLENLVARVAED 311 (605)
Q Consensus 288 ~flD~D~-~~~~~~L~~ll~~~~~~ 311 (605)
+++++|. .+.+..|..+++.+..+
T Consensus 94 lv~~gD~Pli~~~~l~~l~~~~~~~ 118 (239)
T cd02517 94 VNVQGDEPLIPPEMIDQVVAALKDD 118 (239)
T ss_pred EEecCCCCCCCHHHHHHHHHHHHhC
Confidence 9999999 67899999999988665
|
CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design. |
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
Probab=85.58 E-value=10 Score=42.95 Aligned_cols=56 Identities=14% Similarity=0.063 Sum_probs=44.5
Q ss_pred CCCCEEEEeCCCCCCh-----HHHHHHHHhh----ccCCEEEEecCCccc-CcChHHHHHHHHHcCC
Q psy10463 256 LSVPTRVIRSPGRVGL-----IKARLLGARQ----AEGEILVFLDAHCEC-TLGWLENLVARVAEDR 312 (605)
Q Consensus 256 ~~~~v~~i~~~~n~G~-----~~arN~G~~~----A~gd~i~flD~D~~~-~~~~L~~ll~~~~~~~ 312 (605)
+| .+-++..+++.|+ ++|.|.-++. +.++||+-||.|... ++..+.+.+-.+.+..
T Consensus 165 lP-~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~ 230 (720)
T PF03552_consen 165 LP-MLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPK 230 (720)
T ss_pred CC-eEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCC
Confidence 56 7888988888884 7777776644 479999999999976 7888888888876644
|
The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane |
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
Probab=85.51 E-value=12 Score=36.25 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc--CCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE--GEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~--gd~i~f 289 (605)
+.+..+++++.+..- .+|++|-.. ..+ .+.++...+ +++++..+...|.+.+.-.|+.... .+.+++
T Consensus 27 pli~~~i~~l~~~~i----~~i~iv~~~-~~~----~i~~~~~~~--~~~~~~~~~~~g~~~ai~~a~~~~~~~~~~vli 95 (229)
T cd02540 27 PMLEHVLDAARALGP----DRIVVVVGH-GAE----QVKKALANP--NVEFVLQEEQLGTGHAVKQALPALKDFEGDVLV 95 (229)
T ss_pred cHHHHHHHHHHhCCC----CeEEEEECC-CHH----HHHHHhCCC--CcEEEECCCCCCCHHHHHHHHHhhccCCCeEEE
Confidence 577788888776431 365555422 222 233444332 5777777777888888888877654 688999
Q ss_pred ecCCc-ccCcChHHHHHHHHHcCCcE
Q psy10463 290 LDAHC-ECTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 290 lD~D~-~~~~~~L~~ll~~~~~~~~~ 314 (605)
+++|. .+.+..+..+++...+....
T Consensus 96 ~~~D~p~~~~~~i~~l~~~~~~~~~~ 121 (229)
T cd02540 96 LYGDVPLITPETLQRLLEAHREAGAD 121 (229)
T ss_pred EeCCccccCHHHHHHHHHHHHhcCCc
Confidence 99998 46788999999888765443
|
The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively. |
| >KOG1476|consensus | Back alignment and domain information |
|---|
Probab=85.17 E-value=6.7 Score=39.55 Aligned_cols=99 Identities=17% Similarity=0.239 Sum_probs=64.0
Q ss_pred CCcceEEEEeechhhH--HHHHHHHHHHhcCCCCCceeEEEeeCCC-ChHHHHHHHHHHHHHCCCCEEEEeCCCCCChH-
Q psy10463 197 LPKSSIVIVFHNEAWS--ALLRTVHSVISRSPRSMLKEILLVDDAS-TREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI- 272 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~--~l~~~l~sl~~q~~~~~~~eIIvVDd~S-~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~- 272 (605)
.|.|-||-|||.+... .|.+ +..-+.+-+ + .--|||+||+ ..+. ...+.++.+...+++..+.+.+..
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtR-lanTL~~V~-n--LhWIVVEd~~~~~p~----v~~~L~rtgl~ythl~~~t~~~~~~ 157 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTR-LANTLRLVP-N--LHWIVVEDGEGTTPE----VSGILRRTGLPYTHLVHKTPMGYKA 157 (330)
T ss_pred CccEEEEcccccchhHHHHHHH-HHHHHhhcC-C--eeEEEEecCCCCCHH----HHHHHHHcCCceEEEeccCCCCCcc
Confidence 6888999999999822 2222 333333444 4 4789999984 3333 345556655556666666656543
Q ss_pred ----HHHHHHHhhcc---------CCEEEEecCCcccCcChHHH
Q psy10463 273 ----KARLLGARQAE---------GEILVFLDAHCECTLGWLEN 303 (605)
Q Consensus 273 ----~arN~G~~~A~---------gd~i~flD~D~~~~~~~L~~ 303 (605)
..||.|++.-+ .-++.|-|+|...+-..+++
T Consensus 158 ~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e 201 (330)
T KOG1476|consen 158 RRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE 201 (330)
T ss_pred ccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH
Confidence 45898876543 45889999998887766666
|
|
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
Probab=84.83 E-value=5.3 Score=37.73 Aligned_cols=88 Identities=17% Similarity=0.239 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCChHHHHHHHHhhccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGLIKARLLGARQAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~~~arN~G~~~A~gd~i~f 289 (605)
..+..+++.+. . . ..+|+||-+.. .. .+ ... .++++.... ..|...+...|++....+++++
T Consensus 31 ~ll~~~i~~l~--~--~-~~~i~vv~~~~-~~-------~~-~~~--~~~~v~~~~~~~~g~~~~i~~~l~~~~~~~vlv 94 (193)
T PRK00317 31 PLIQHVIERLA--P--Q-VDEIVINANRN-LA-------RY-AAF--GLPVIPDSLADFPGPLAGILAGLKQARTEWVLV 94 (193)
T ss_pred EHHHHHHHHHh--h--h-CCEEEEECCCC-hH-------HH-Hhc--CCcEEeCCCCCCCCCHHHHHHHHHhcCCCeEEE
Confidence 56677777665 1 1 24777773321 11 11 122 345555432 3677778888888878899999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEE
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRV 315 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~v 315 (605)
+++|.- ++++.++.+++.+.++...+
T Consensus 95 ~~~D~P~i~~~~i~~l~~~~~~~~~~~ 121 (193)
T PRK00317 95 VPCDTPFIPPDLVARLAQAAGKDDADV 121 (193)
T ss_pred EcCCcCCCCHHHHHHHHHhhhcCCCcE
Confidence 999995 59999999999876554433
|
|
| >cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose | Back alignment and domain information |
|---|
Probab=84.34 E-value=48 Score=33.31 Aligned_cols=86 Identities=19% Similarity=0.180 Sum_probs=53.7
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE 283 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~ 283 (605)
+|..++. +.+..++..+...... .+|+||-+..... .++++.......+.++..+...|-+.|.-.++....
T Consensus 27 l~l~g~~-~li~~~l~~l~~~~~~---~~i~vvt~~~~~~----~v~~~l~~~~~~~~ii~ep~~~gTa~ai~~a~~~~~ 98 (274)
T cd02509 27 LKLFGDK-SLLQQTLDRLKGLVPP---DRILVVTNEEYRF----LVREQLPEGLPEENIILEPEGRNTAPAIALAALYLA 98 (274)
T ss_pred eEcCCCC-cHHHHHHHHHhcCCCC---CcEEEEechHHHH----HHHHHHhhcCCCceEEECCCCCCcHHHHHHHHHHHH
Confidence 4555544 6788888877654322 3777775422112 233333331226788888877888888777765543
Q ss_pred ----CCEEEEecCCcccC
Q psy10463 284 ----GEILVFLDAHCECT 297 (605)
Q Consensus 284 ----gd~i~flD~D~~~~ 297 (605)
.++++++.+|..+.
T Consensus 99 ~~~~~~~vlVl~~D~~i~ 116 (274)
T cd02509 99 KRDPDAVLLVLPSDHLIE 116 (274)
T ss_pred hcCCCCeEEEecchhccc
Confidence 57899999998775
|
GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes. |
| >PLN03180 reversibly glycosylated polypeptide; Provisional | Back alignment and domain information |
|---|
Probab=83.81 E-value=1.9 Score=43.89 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=26.2
Q ss_pred hHHHHHHHHhhccCCEEEEecCCcccCcCh
Q psy10463 271 LIKARLLGARQAEGEILVFLDAHCECTLGW 300 (605)
Q Consensus 271 ~~~arN~G~~~A~gd~i~flD~D~~~~~~~ 300 (605)
-.+.||.|.-.++.+|++++|+||.+..+|
T Consensus 81 ~~a~R~fGyL~s~~~yivsiDDD~~Pa~d~ 110 (346)
T PLN03180 81 DSACRCFGYLVSKKKYIFTIDDDCFVAKDP 110 (346)
T ss_pred cccchhhhheeecceEEEEECCCCCCCCCC
Confidence 356799999999999999999999997774
|
|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
Probab=82.19 E-value=24 Score=33.58 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEec
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLD 291 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD 291 (605)
+.+..++.++.+... .+|+||-+...+ .+.+.+.+.. ..+..+.++..+...|.+.+...+......+.+++++
T Consensus 30 pli~~~l~~l~~~g~----~~i~vv~~~~~~-~i~~~~~~~~-~~~~~i~~~~~~~~~g~~~al~~~~~~~~~~~~lv~~ 103 (217)
T cd04181 30 PILEYIIERLARAGI----DEIILVVGYLGE-QIEEYFGDGS-KFGVNIEYVVQEEPLGTAGAVRNAEDFLGDDDFLVVN 103 (217)
T ss_pred eHHHHHHHHHHHCCC----CEEEEEeccCHH-HHHHHHcChh-hcCceEEEEeCCCCCccHHHHHHhhhhcCCCCEEEEE
Confidence 567777777766431 467776544322 2222222111 0223577777766688888888888877778899999
Q ss_pred CCcccCcChHHHHHHHHHcCC
Q psy10463 292 AHCECTLGWLENLVARVAEDR 312 (605)
Q Consensus 292 ~D~~~~~~~L~~ll~~~~~~~ 312 (605)
+|.....+ +..+++...+..
T Consensus 104 ~D~~~~~~-~~~~~~~~~~~~ 123 (217)
T cd04181 104 GDVLTDLD-LSELLRFHREKG 123 (217)
T ss_pred CCeecCcC-HHHHHHHHHhcC
Confidence 99988777 455555554433
|
Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. |
| >PF03498 CDtoxinA: Cytolethal distending toxin A/C family; InterPro: IPR003558 Escherichia coli, Haemophilus spp and Campylobacter spp | Back alignment and domain information |
|---|
Probab=81.98 E-value=1.4 Score=39.94 Aligned_cols=82 Identities=18% Similarity=0.286 Sum_probs=44.5
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec-CCc--eeec-CCCeeeecCCCCCC-CCCceE
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL-PTD--LIAT-DESVCLDVPEYEND-ISPRVR 588 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~-~~g--~i~~-~~~~CLd~~~~~~~-~g~~v~ 588 (605)
+=+++|..++.||.+... +.+..-.| ......|.|.+-. ..| +|+. .++.||.+...... ....+.
T Consensus 53 ~Vqf~n~~~~~CL~~~~~--------G~~~~~~C-~~~~~~q~F~iiPtttgAVQIks~~~~~Cl~~~~~~~~~~~~~i~ 123 (150)
T PF03498_consen 53 YVQFVNPKTGTCLAAYGN--------GVFHYKSC-DQDNLEQVFSIIPTTTGAVQIKSLSTGECLQTFNNSRTPIYYSIG 123 (150)
T ss_dssp EEEEEETTTSEEEEEETT--------CEEEE--T-TTCHGHH-EEEEEBTTS-EEEEETTT--EEEE-STTSS-SSEEEE
T ss_pred EEEEEcCCCCcceeecCC--------CeEeeccc-CCCChhceEEEEEcCCCcEEEEecCCCceEEecCCCceeEEeeEE
Confidence 336778788889998432 33344449 4434579997631 444 5664 46799998764321 123788
Q ss_pred EEeCCCCC----CcceEeCC
Q psy10463 589 ILACSGFN----RQRWTYDK 604 (605)
Q Consensus 589 l~~C~~~~----~Q~W~~~~ 604 (605)
+.+|+... .|+|.+..
T Consensus 124 l~~Cd~~~~~~l~~lw~itP 143 (150)
T PF03498_consen 124 LTPCDKSKEINLDQLWFITP 143 (150)
T ss_dssp EE---S-EEETGGGEEEEE-
T ss_pred eeeCCCcCCCCHHHcEEEcC
Confidence 99994432 79998753
|
all produce a toxin that is seen to cause distension in certain cell lines [, ], which eventually disintegrate and die. This novel toxin, termed cytolethal distending toxin (cdt), has three subunits: A, B and C. Their sizes are approx. 27.7, 29.5 and 19.9kDa respectively [], and they appear to be entirely novel []. Further research on the complete toxin has revealed that it blocks the cell cycle at stage G2, through inactivation of the cyclin-dependent kinase Cdk1, and without induction of DNA breaks. This leads to multipolar abortive mitosis and micronucleation, associated with centrosomal amplification []. The roles of each subunit are unclear, but it is believed that they have separate roles in pathogenicity. This entry represents the A and C subunits.; GO: 0009405 pathogenesis; PDB: 2F2F_A 1SR4_C. |
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
Probab=81.54 E-value=20 Score=33.64 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-CCChHHHHHHHHhhc---cCCEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIKARLLGARQA---EGEIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-n~G~~~arN~G~~~A---~gd~i 287 (605)
..+..++..++... ..+|+||-....+. .. .+........ .+.++..+. ..|...+.-.|++++ ..+++
T Consensus 27 ~ll~~~i~~~~~~~----~~~i~vv~~~~~~~-~~-~~~~~~~~~~-~~~~~~~~~~~~G~~~si~~gl~~~~~~~~d~v 99 (190)
T TIGR03202 27 TLGSASLKTALSSR----LSKVIVVIGEKYAH-LS-WLDPYLLADE-RIMLVCCRDACEGQAHSLKCGLRKAEAMGADAV 99 (190)
T ss_pred cHHHHHHHHHHhCC----CCcEEEEeCCccch-hh-hhhHhhhcCC-CeEEEECCChhhhHHHHHHHHHHHhccCCCCeE
Confidence 46666676655422 14777775443221 11 1111111112 456554433 357777888888875 47999
Q ss_pred EEecCCcc-cCcChHHHHHHHHHcCCcEEEe
Q psy10463 288 VFLDAHCE-CTLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 288 ~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~ 317 (605)
+++++|.- ++++.++.|++.+...+..++.
T Consensus 100 lv~~~D~P~v~~~~i~~L~~~~~~~~~~~~~ 130 (190)
T TIGR03202 100 VILLADQPFLTADVINALLALAKRRPDDYVA 130 (190)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhhCCCCEEE
Confidence 99999997 5899999999988765554444
|
In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.17 E-value=40 Score=38.31 Aligned_cols=93 Identities=18% Similarity=0.304 Sum_probs=58.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
.-...||||+.||.. ..|+-||.--|.+ --||||-+.+. |.- -.+.+..+..-....+-++++..
T Consensus 54 ~~~~aivvp~k~e~~----~~~~gvl~~ip~~--c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~~~~~~vhq~dp~~a 127 (694)
T PRK14502 54 EKKMAIVLPIKDEDL----KVFEGVLSGIPHD--CLMIVISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELA 127 (694)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCchHHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 456899999999994 4445555555443 36777777775 321 12233344333334454444332
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCE 187 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~ 187 (605)
+.|++-+...|+..| ..+|+-|+|+|..
T Consensus 128 ~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny 176 (694)
T PRK14502 128 NAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNY 176 (694)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCC
Confidence 567777788887777 4799999999973
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 605 | ||||
| 1xhb_A | 472 | The Crystal Structure Of Udp-Galnac: Polypeptide Al | 1e-113 | ||
| 2ffu_A | 501 | Crystal Structure Of Human Ppgalnact-2 Complexed Wi | 1e-83 | ||
| 2d7i_A | 570 | Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac | 4e-82 |
| >pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N- Acetylgalactosaminyltransferase-T1 Length = 472 | Back alignment and structure |
|
| >pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp And Ea2 Length = 501 | Back alignment and structure |
|
| >pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ Length = 570 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472 | Back alignment and structure |
|---|
Score = 402 bits (1035), Expect = e-135
Identities = 201/422 (47%), Positives = 268/422 (63%), Gaps = 14/422 (3%)
Query: 185 HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREF 244
C + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR M++EI+LVDDAS R+F
Sbjct: 16 LEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF 75
Query: 245 LKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENL 304
LK L+ YV KL VP VIR R GLI+ARL GA + G+++ FLDAHCECT GWLE L
Sbjct: 76 LKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPL 135
Query: 305 VARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDF 364
+AR+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D
Sbjct: 136 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDR 195
Query: 365 TEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHV 424
T P +TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV
Sbjct: 196 TLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHV 255
Query: 425 AHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLE 484
H+FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P + D + SRL
Sbjct: 256 GHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGV-TKVDYGDISSRLG 314
Query: 485 LRKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASL 544
LR++L+C F WYL +++P +P G IR+V+T++C++ K + +
Sbjct: 315 LRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKE-----NEKVGI 369
Query: 545 LPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYD 603
C H Q+F I TD+ +CLDV + V +L C Q W YD
Sbjct: 370 FNC-HGMGGNQVFSYT-ANKEIRTDD-LCLDVSKLNG----PVTMLKCHHLKGNQLWEYD 422
Query: 604 KE 605
Sbjct: 423 PV 424
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 2e-48
Identities = 84/136 (61%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 62 SDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSM 121
S+ I +NR+LPDVR CKTKV+ + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR M
Sbjct: 2 SEMIALNRSLPDVRLEGCKTKVYPDN-LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHM 60
Query: 122 LKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVF 181
++EI+LVDDAS R+FLK L+ YV KL VP VIR R GLI+ARL GA + G+++ F
Sbjct: 61 IEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITF 120
Query: 182 LDAHCECTLVFNEEFL 197
LDAHCECT + E L
Sbjct: 121 LDAHCECTAGWLEPLL 136
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501 | Back alignment and structure |
|---|
Score = 390 bits (1002), Expect = e-130
Identities = 172/423 (40%), Positives = 232/423 (54%), Gaps = 20/423 (4%)
Query: 185 HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREF 244
H +C LP +S+VI FHNEA SALLRTV SV+ +SP ++KEI+LVDD S
Sbjct: 53 HDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPE 112
Query: 245 LKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENL 304
+ L + RV+R+ R GL+++R+ GA A+ ++L FLD+HCEC WLE L
Sbjct: 113 DGALLGKIE-----KVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL 167
Query: 305 VARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDF 364
+ RVAEDRTRVV P+ID+I+ F YV + G F+W L F+W ++ +
Sbjct: 168 LERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNP 227
Query: 365 TEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHV 424
P KTP +AGGLF +D+ YF +G YD M VWGGENLE+SFRVWQCGGS+EI PCS V
Sbjct: 228 VAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRV 287
Query: 425 AHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLE 484
H+FRK PY+FPGG V N R A VWMDE+ FY+ P A ++SRLE
Sbjct: 288 GHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARN-VPYGNIQSRLE 346
Query: 485 LRKQLKCHSFKWYLTHVWPHHFLPMD-DKFFGRIRHVQTHKCVEKPLAKGSMNQASGPAS 543
LRK+L C FKWYL +V+P +P D FG ++ A G
Sbjct: 347 LRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGH-------FADGVVG 399
Query: 544 LLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTY 602
+ C H Q + + + + CL V + +++ C + RQ+W
Sbjct: 400 VYEC-HNAGGNQEWALT-KEKSVKHMDL-CLTVVDRAP--GSLIKLQGCRENDSRQKWEQ 454
Query: 603 DKE 605
+
Sbjct: 455 IEG 457
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501 | Back alignment and structure |
|---|
Score = 168 bits (425), Expect = 1e-45
Identities = 61/142 (42%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 48 AQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALL 107
Q Y N+FN + SD++ ++R +PD R +C+ K + + LP +S+VI FHNEA SALL
Sbjct: 25 GQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVD-LPATSVVITFHNEARSALL 83
Query: 108 RTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 167
RTV SV+ +SP ++KEI+LVDD S + L + RV+R+ R GL+++R
Sbjct: 84 RTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKI-----EKVRVLRNDRREGLMRSR 138
Query: 168 LLGARQAEGEILVFLDAHCECT 189
+ GA A+ ++L FLD+HCEC
Sbjct: 139 VRGADAAQAKVLTFLDSHCECN 160
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570 | Back alignment and structure |
|---|
Score = 384 bits (988), Expect = e-127
Identities = 164/438 (37%), Positives = 241/438 (55%), Gaps = 34/438 (7%)
Query: 185 HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREF 244
H C E LP +SI+I FHNE WS+LLRTVHSV++RSP ++ EI+LVDD S RE
Sbjct: 99 HPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREH 158
Query: 245 LKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENL 304
LK L++Y+A R++R+ R GLI+ R+LGA A G+++ FLD+HCE + WL L
Sbjct: 159 LKKPLEDYMALFP-SVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPL 217
Query: 305 VARVAEDRTRVVCPVIDIISDVTFAYVR-SFELHWGAFNWELHFRWYTYGSSDAIIKRKD 363
+ R+A +R +VCP+ID+I F Y + + GAF+WE++++ ++ D
Sbjct: 218 LDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPEL---QKAD 274
Query: 364 FTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH 423
++PF++P MAGGLFA+DR +F+ +G YD +++WGGE E+SF+VW CGG +E PCS
Sbjct: 275 PSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSR 334
Query: 424 VAHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRL 483
V H++RK PY P G L NL RVA VWMDE+AE+ ++ PE + V +
Sbjct: 335 VGHIYRKYVPYKVPAG--VSLARNLKRVAEVWMDEYAEYIYQRRPEY-RHLSAGDVAVQK 391
Query: 484 ELRKQLKCHSFKWYLTHVWP---HHFLPMD--DKFFGRIRHVQTHKCVEKPLAKGSMNQA 538
+LR L C SFKW++T + + P++ +G IR+V T C + + + A
Sbjct: 392 KLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCAD------TKHGA 445
Query: 539 SG-PASLLPC-----THLPVLTQMFVM----KLPTDLIATDESVCLDVPEYENDISPRVR 588
G P L C Q+F + + C D + + V
Sbjct: 446 LGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTS----PVT 501
Query: 589 ILACSGFN-RQRWTYDKE 605
+ C Q W Y K+
Sbjct: 502 LYDCHSMKGNQLWKYRKD 519
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570 | Back alignment and structure |
|---|
Score = 170 bits (431), Expect = 5e-46
Identities = 73/147 (49%), Positives = 103/147 (70%), Gaps = 2/147 (1%)
Query: 43 SNLSDAQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEA 102
++ Q Y+ N FN+ VSD+I +NR+LPD+R P C +K + E LP +SI+I FHNE
Sbjct: 66 TDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLET-LPNTSIIIPFHNEG 124
Query: 103 WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG 162
WS+LLRTVHSV++RSP ++ EI+LVDD S RE LK L++Y+A R++R+ R G
Sbjct: 125 WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP-SVRILRTKKREG 183
Query: 163 LIKARLLGARQAEGEILVFLDAHCECT 189
LI+ R+LGA A G+++ FLD+HCE
Sbjct: 184 LIRTRMLGASVATGDVITFLDSHCEAN 210
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 74.2 bits (182), Expect = 4e-14
Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 28/261 (10%)
Query: 193 NEEFLPKSSIVI-VFHNEAWSALLRTVHSVIS-RSPRSMLKEILLVDDAS---TREFLKS 247
+ + SIVI ++ L T+ + + ++ E+++ DD S E ++
Sbjct: 88 KQLIIDGLSIVIPTYNRAKI--LAITLACLCNQKTIYDY--EVIVADDGSKENIEEIVR- 142
Query: 248 SLDEYVAKLSVPTRVIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVA 306
E+ + L++ + +R L R LG R A+ + LD W+++ +
Sbjct: 143 ---EFESLLNI--KYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYME 197
Query: 307 RVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTE 366
+A D + I Y+ K D+
Sbjct: 198 LLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRI 257
Query: 367 PFKTP------------AMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGG 414
+GG A + + F G +DEE WGGE+ E +R+++ G
Sbjct: 258 EHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGC 317
Query: 415 SIEIAPCSHVAHLFRKASPYS 435
+ H
Sbjct: 318 YFRSVEGAMAYHQEPPGKENE 338
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 32/234 (13%), Positives = 73/234 (31%), Gaps = 33/234 (14%)
Query: 181 FLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS 240
+ E + +P SI I +N + ++R V S ++++ E+ + DD S
Sbjct: 358 YFYRKKEKIESATLKRVPLVSIYIPAYNCSK-YIVRCVESALNQTITD--LEVCICDDGS 414
Query: 241 TREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGW 300
T + L+ L E+ A R I + G+ A R G + LD+
Sbjct: 415 TDDTLRI-LQEHYANHPR-VRFISQKNK-GIGSASNTAVRLCRGFYIGQLDSDDFLEPDA 471
Query: 301 LENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360
+E + +D + Y + + + +
Sbjct: 472 VELCLDEFRKD------------LSLACVY--TTNRNIDREGNLISNGY----------N 507
Query: 361 RKDFTEP-FKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCG 413
++ + + + ++E + + +M ++ + G
Sbjct: 508 WPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG 559
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 6e-06
Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 66 PVNRTLPDVRKPKCKTKVFNEEFLPKSSIVI-VFHNEAWSALLRTVHSVIS-RSPRSMLK 123
N + ++ + + + SIVI ++ L T+ + + ++
Sbjct: 69 STNDYVWAGKRKELDDYPRKQLIIDGLSIVIPTYNRAKI--LAITLACLCNQKTIYDY-- 124
Query: 124 EILLVDDAS---TREFLKSSLDEYVAKLSVPTRVIRSPGR-VGLIKARLLGARQAEGEIL 179
E+++ DD S E ++ E+ + L++ + +R L R LG R A+ +
Sbjct: 125 EVIVADDGSKENIEEIVR----EFESLLNI--KYVRQKDYGYQLCAVRNLGLRAAKYNYV 178
Query: 180 VFLDA 184
LD
Sbjct: 179 AILDC 183
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 72 PDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDA 131
P + K K + + +P SI I +N + ++R V S ++++ E+ + DD
Sbjct: 357 PYFYRKKEKIESATLKRVPLVSIYIPAYNCSK-YIVRCVESALNQTITD--LEVCICDDG 413
Query: 132 STREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 184
ST + L+ L E+ A R I + G+ A R G + LD+
Sbjct: 414 STDDTLRI-LQEHYANHPR-VRFISQKNK-GIGSASNTAVRLCRGFYIGQLDS 463
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Length = 657 | Back alignment and structure |
|---|
Score = 60.0 bits (145), Expect = 1e-09
Identities = 24/244 (9%), Positives = 70/244 (28%), Gaps = 22/244 (9%)
Query: 198 PKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
++ I N + + + + ++ +++ D + A+L
Sbjct: 180 ANIAVGIPTFN-RPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL 238
Query: 257 SVPTRVIRSPGR-------VGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVA 309
+ P + +A + + + ++F+D + ++A
Sbjct: 239 GSRLSIHDQPNLGGSGGYSRVMYEAL----KNTDCQQILFMDDDIRLEPDSILRVLAMHR 294
Query: 310 EDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNW------ELHFRWYTYGSSDAIIKRK 362
+ +V + + + + ++ + F W E + Y +D + K
Sbjct: 295 FAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSK 354
Query: 363 DFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCS 422
I R +G + + ++ + R + G P +
Sbjct: 355 LLHRRIDVDYNGWWTCMIPRQVAEELG-QPLPLFIK-WDDADYGLRAAEHGYPTVTLPGA 412
Query: 423 HVAH 426
+ H
Sbjct: 413 AIWH 416
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Length = 729 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 45/351 (12%), Positives = 95/351 (27%), Gaps = 30/351 (8%)
Query: 198 PKSSIVIVFHN-EAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
K +I++ ++N E + + + S+ + + +++V+D ST + K +DE +
Sbjct: 2 NKLTIIVTYYNAEEY--ITGCLESIKQQRTQDF--NLIIVNDGSTDQSKKL-MDEAIKDY 56
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
R I G AR + + E +FLDA E + + + + ++
Sbjct: 57 DKNIRFIDLDENSGHAHARNIALEEVETPYFMFLDADDELASYAITFYLEK-FNNTDGLI 115
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS--DAIIKRKDFTE-------- 366
P+ + +V + FN + + + S + I +
Sbjct: 116 APIHSFTTQ-RPQFVDLDRVRVEYFNAKENINSFLRKQSACNIIFRTAIVRAHHIRFNEN 174
Query: 367 -------PFKTPAM--AGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIE 417
F M I F+ G + + S
Sbjct: 175 LNTYVDWSFVLEYMKYVNKFVRIFNFPFYFRGEVYDPFETLTLSEQNFDILFKDYVNSFY 234
Query: 418 IAPCSHVAHLFRKASPYSFPGGVSEVLYGNL---ARVALVWMDEWAEFYFKFNPEAEKQR 474
A R+ ++ D E + K +
Sbjct: 235 DAIKRATNPKVREFIVTKMGNKIANEFEPTRYDINERYQTHKDTLVELSKFLHVHLVKNQ 294
Query: 475 DKQAVRSRLELRKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKC 525
+ L +FK H + + + R +
Sbjct: 295 KLINKIETILLMNNETDKAFKVNQFRKTLRHVKNIVLRRKNKERSLYDLTD 345
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Length = 729 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 90 PKSSIVIVFHN-EAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 148
K +I++ ++N E + + + S+ + + +++V+D ST + K +DE +
Sbjct: 2 NKLTIIVTYYNAEEY--ITGCLESIKQQRTQDF--NLIIVNDGSTDQSKKL-MDEAIKDY 56
Query: 149 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 184
R I G AR + + E +FLDA
Sbjct: 57 DKNIRFIDLDENSGHAHARNIALEEVETPYFMFLDA 92
|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Length = 249 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 2e-06
Identities = 28/236 (11%), Positives = 57/236 (24%), Gaps = 42/236 (17%)
Query: 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPT 260
S+ + ++A R + S E L D+ +F
Sbjct: 19 SVCSLVRDQAK--YDRLLESFERFGFTPDKAEFLAADNREGNQF---------------- 60
Query: 261 RVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVI 320
+ +G ++F E ++LVA + P
Sbjct: 61 ---------HGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEAD--PKW 109
Query: 321 DIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI 380
+ A L+ LH R+ P + ++ +
Sbjct: 110 LVAG---VAGSPWRPLNHSVTAQALHISDVFG------NDRRRGNVPCRVESLDECFLLM 160
Query: 381 DRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSF 436
R + + ++ + GG H+ H R + +F
Sbjct: 161 RRLKPVLNSYDMQG---FHYYGADLCLQAEFLGGRAYAID-FHLHHYGRAIADENF 212
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Length = 329 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 1e-05
Identities = 39/255 (15%), Positives = 77/255 (30%), Gaps = 26/255 (10%)
Query: 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAKL- 256
S+V+ +E + + IS ++ E++++D S T A++
Sbjct: 51 SVVLPALDEE-DTIGSVI-DSISPLVDGLVDELIVLDSGSTDDTEIRAV----AAGARVV 104
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHC-ECTLGWLENLVARVAEDRTRV 315
S + P R G +A + G+I+VF+D+ ++ LV +
Sbjct: 105 SREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVH 164
Query: 316 VCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAG 375
+ V Y R + + E G
Sbjct: 165 L---------VKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAALRPELGCILQPLG 215
Query: 376 GLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYS 435
G +A R + +G E + + + G IA + + + P +
Sbjct: 216 GEYAATRELLTSVPFAPG----YGVE-IGLLVDTFDRLGLDAIAQVN-LGVREHRNRPLA 269
Query: 436 FPGGVSEVLYGNLAR 450
G +S + L
Sbjct: 270 ELGAMSRQVIATLLS 284
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Length = 329 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 9e-04
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS---TREFLKSSLDEYVAKL- 148
S+V+ +E + + IS ++ E++++D S T A++
Sbjct: 51 SVVLPALDEE-DTIGSVI-DSISPLVDGLVDELIVLDSGSTDDTEIRAV----AAGARVV 104
Query: 149 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 184
S + P R G +A + G+I+VF+D+
Sbjct: 105 SREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDS 140
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* Length = 432 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 2e-04
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLP----VLTQMFVMKLPTDLIATDE 570
G I + ++ C++ +GS SG + C L + + +
Sbjct: 197 GEIVNAKSGMCLD---VEGSDG--SGNVGIYRCDDLRDQMWSRPNAYCNGDYCSFLNKES 251
Query: 571 SVCLDVPEYENDISPRVRILACSGFNRQRWTYD 603
+ CLDV + + V C G QR+ +
Sbjct: 252 NKCLDVSGDQG--TGDVGTWQCDGLPDQRFKWV 282
|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Length = 255 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLK--EILLVDDAS---TREFLKSSLDEY 144
PK S+++ +N++ + +++ S++S++ E+ ++DD S T ++ L++
Sbjct: 1 PKVSVIMTSYNKS-DYVAKSISSILSQT----FSDFELFIMDDNSNEETLNVIRPFLNDN 55
Query: 145 VAKL--SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 184
+ S + V + AEGE + +
Sbjct: 56 RVRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATD 97
|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Length = 255 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLK--EILLVDDAS---TREFLKSSLDEY 252
PK S+++ +N++ + +++ S++S++ E+ ++DD S T ++ L++
Sbjct: 1 PKVSVIMTSYNKS-DYVAKSISSILSQT----FSDFELFIMDDNSNEETLNVIRPFLNDN 55
Query: 253 VAKL--SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDA 292
+ S + V + AEGE + +
Sbjct: 56 RVRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATD 97
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 8e-04
Identities = 89/616 (14%), Positives = 171/616 (27%), Gaps = 192/616 (31%)
Query: 15 NQQDYIDRRGVHVVVGHYLGD----SVDGGLHSNLSDAQQLYQINRFNLLVSDRIPVNRT 70
+ Y + + V ++ + V S LS + + ++ + V+ T
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEE-------IDHIIMSKDAVSGT 64
Query: 71 --LPDV--RKPKCKTKVFNEEFLPKS---------------SIVIVFHNEAWSALLRTVH 111
L K + + F EE L + S++ + E L
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 112 SV----ISR-SPRSMLKEILLVDDASTREFL-------KSSL-----DEYVAKLSVPTRV 154
+SR P L++ LL + + K+ + Y + + ++
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184
Query: 155 -------IRSPGRVGLIKARLL---------GARQAEGEILVFLDAHCECTLVFNEEFLP 198
SP V + +LL + + L E + +
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 199 KSSIVI--VFHNEAWSA-------LLRT-------VHSVISRSPRSMLKEILLVDDASTR 242
+V+ V + +AW+A LL T S + + S+ + + +
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 243 EFLKSSLDEYVAKLSVPTRVIR-SPGRVGLIKARL------------LGARQAEGEILVF 289
L LD L P V+ +P R+ +I + + + I
Sbjct: 305 SLLLKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 290 LDA-------HC--------------ECTLG--W-----------LENLVAR--VAEDRT 313
L+ L W + L V +
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 314 RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAM 373
+ I ++ + LH +I+ + + F + +
Sbjct: 423 ESTISIPSIYLELKVKLENEYALH------------------RSIVDHYNIPKTFDSDDL 464
Query: 374 AGGLFAIDRAYFFHIGAY-------DEEMQV---------WGGENLEMSFRVWQCGGSIE 417
+D+ ++ HIG + E M + + + + W GSI
Sbjct: 465 --IPPYLDQYFYSHIG-HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 418 ------------IAPCSHVAHLFRKASPY-SFPGGVSEVL----YGNLARVALVWMDEWA 460
I C + R + F + E L Y +L R+AL M E
Sbjct: 522 NTLQQLKFYKPYI--CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIAL--MAEDE 577
Query: 461 EFYFKFNPEAEKQRDK 476
+ EA KQ +
Sbjct: 578 AIFE----EAHKQVQR 589
|
| >3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} Length = 118 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 9e-04
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 15/87 (17%)
Query: 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCL 574
G +R+ QT +C++ + G LPC Q ++ + + L
Sbjct: 45 GTVRNAQTGRCLD--------SNYDGAVYTLPCNGGS--YQKWLFYSNGYIQNVETGRVL 94
Query: 575 DVPEYENDISPRVRILACSGFNRQRWT 601
D + V L +G N Q+W
Sbjct: 95 DSNY-----NGNVYTLPANGGNYQKWY 116
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 605 | |||
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 100.0 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 100.0 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 100.0 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 100.0 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.96 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.95 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 99.95 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.94 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 99.91 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.9 | |
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 99.9 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 99.89 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.89 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 99.87 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 99.86 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 99.86 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.84 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 99.82 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.75 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.73 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 99.64 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 99.61 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 99.59 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 99.52 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 99.47 | |
| 1knl_A | 130 | Endo-1,4-beta-xylanase A; carbohydrate binding mod | 99.47 | |
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 99.43 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 99.4 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 99.35 | |
| 2ao3_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.34 | |
| 2dry_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.32 | |
| 2dry_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.31 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 99.23 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 99.23 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 99.22 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 99.21 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.19 | |
| 1knl_A | 130 | Endo-1,4-beta-xylanase A; carbohydrate binding mod | 99.19 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 99.19 | |
| 3a07_A | 118 | Actinohivin; carbohydrate-binding module family 13 | 99.19 | |
| 3lw6_A | 287 | FI08434P, beta-4-galactosyltransferase 7; protein- | 99.18 | |
| 3phz_A | 286 | Ricin B-related lectin; beta trefoil, saccharide b | 99.17 | |
| 3a07_A | 118 | Actinohivin; carbohydrate-binding module family 13 | 99.15 | |
| 1abr_B | 267 | Abrin-A; glycosidase/carbohydrate complex, lectin, | 99.15 | |
| 3c9z_A | 258 | Agglutinin II, SNA-II; beta-trefoil, ricin-B domai | 99.09 | |
| 1vcl_A | 432 | Hemolytic lectin CEL-III; hemolysis, hemagglutinat | 99.09 | |
| 3phz_A | 286 | Ricin B-related lectin; beta trefoil, saccharide b | 99.08 | |
| 2aai_B | 262 | Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG | 99.08 | |
| 1m2t_B | 263 | Mistletoe lectin I B chain; ribosome inactivation, | 99.08 | |
| 1ggp_B | 254 | TKL-1, protein (lectin 1 B chain); sugar binding p | 99.04 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 99.03 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 99.01 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 98.99 | |
| 1vcl_A | 432 | Hemolytic lectin CEL-III; hemolysis, hemagglutinat | 98.97 | |
| 2aai_B | 262 | Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG | 98.93 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.92 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 98.9 | |
| 1ggp_B | 254 | TKL-1, protein (lectin 1 B chain); sugar binding p | 98.89 | |
| 2vlc_A | 570 | Cinnamomin, type 2 ribosome-inactivating protein c | 98.88 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 98.87 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 98.87 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 98.87 | |
| 1abr_B | 267 | Abrin-A; glycosidase/carbohydrate complex, lectin, | 98.86 | |
| 3c9z_A | 258 | Agglutinin II, SNA-II; beta-trefoil, ricin-B domai | 98.85 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 98.85 | |
| 2vlc_A | 570 | Cinnamomin, type 2 ribosome-inactivating protein c | 98.83 | |
| 1m2t_B | 263 | Mistletoe lectin I B chain; ribosome inactivation, | 98.79 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 98.67 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 98.65 | |
| 1ybi_A | 288 | HA33A, HA33/A, non-toxin haemagglutinin HA34; beta | 98.6 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 98.54 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 98.54 | |
| 2vse_A | 841 | MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra | 98.19 | |
| 2vse_A | 841 | MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra | 98.02 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 97.99 | |
| 2c0n_A | 203 | A197; thermophil protein, thermophilic virus, STIV | 97.96 | |
| 1ybi_A | 288 | HA33A, HA33/A, non-toxin haemagglutinin HA34; beta | 97.84 | |
| 1dqg_A | 135 | Mannose receptor; beta trefoil, multilectin recept | 97.55 | |
| 1xez_A | 721 | Hemolysin, cytolysin; pore-forming toxin, Pro-toxi | 97.17 | |
| 2ao3_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 96.68 | |
| 2x2s_A | 153 | Agglutinin, agglutinin SSA; fungal lectin, beta-tr | 96.42 | |
| 1sr4_A | 206 | CDT A, cytolethal distending toxin subunit A; bact | 95.44 | |
| 1omz_A | 293 | Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro | 94.5 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 94.33 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 94.28 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 92.62 | |
| 2d0j_A | 246 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 92.52 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 92.01 | |
| 1sr4_A | 206 | CDT A, cytolethal distending toxin subunit A; bact | 91.28 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 90.55 | |
| 3cu0_A | 281 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 90.43 | |
| 1v84_A | 253 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 88.59 | |
| 3lw6_A | 287 | FI08434P, beta-4-galactosyltransferase 7; protein- | 87.61 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 86.95 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 86.15 | |
| 2e3d_A | 302 | UTP--glucose-1-phosphate uridylyltransferase; UDP- | 85.3 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 85.03 | |
| 3tzt_A | 276 | Glycosyl transferase family 8; structural genomics | 82.08 |
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-75 Score=642.49 Aligned_cols=433 Identities=42% Similarity=0.786 Sum_probs=380.1
Q ss_pred cchHHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcce
Q psy10463 45 LSDAQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKE 124 (605)
Q Consensus 45 ~~~~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~E 124 (605)
....++.|++++||.++|++|++.|++||+|++.|+...|+ ..+|.+|||||+||++++.|.+||+||++|++++..+|
T Consensus 22 ~~~~~~~~~~~~~n~~~s~~i~~~r~~~d~r~~~~~~~~~~-~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~E 100 (501)
T 2ffu_A 22 VRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWR-VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKE 100 (501)
T ss_dssp CCTTSCTTTTTSSCHHHHHHSCTTCCCCCCSCGGGGGCCCC-SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEE
T ss_pred hhhhhhhHHhcCcCHHHHcccCCCCcCCCCChhHhccccCC-cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhcee
Confidence 44566789999999999999999999999999999999998 88999999999999994488888888888887764457
Q ss_pred EEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEE
Q psy10463 125 ILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVI 204 (605)
Q Consensus 125 iivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVII 204 (605)
||||||||+|+|+
T Consensus 101 IIvVDDgS~D~t~------------------------------------------------------------------- 113 (501)
T 2ffu_A 101 IILVDDYSNDPED------------------------------------------------------------------- 113 (501)
T ss_dssp EEEEECSCSCTHH-------------------------------------------------------------------
T ss_pred EEEEECCCCchHH-------------------------------------------------------------------
Confidence 7777777776642
Q ss_pred EeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccC
Q psy10463 205 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEG 284 (605)
Q Consensus 205 p~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~g 284 (605)
.. +.++.+ +|++++.++|.|+++|+|.|+++|+|
T Consensus 114 -----------------------------------------~~----~~~~~~-~v~vi~~~~n~G~~~A~N~G~~~A~g 147 (501)
T 2ffu_A 114 -----------------------------------------GA----LLGKIE-KVRVLRNDRREGLMRSRVRGADAAQA 147 (501)
T ss_dssp -----------------------------------------HH----GGGGBT-TEEEEECSSCCHHHHHHHHHHHHCCS
T ss_pred -----------------------------------------HH----HHhcCC-CEEEEECCCCcCHHHHHHHHHHhcCC
Confidence 10 112234 79999999999999999999999999
Q ss_pred CEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCC
Q psy10463 285 EILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDF 364 (605)
Q Consensus 285 d~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~ 364 (605)
|||+|||+|+++.|+||++|++.+.+++..+|+|.++.++.+++.+........+++.|.+.+.|...+...........
T Consensus 148 d~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (501)
T 2ffu_A 148 KVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNP 227 (501)
T ss_dssp SEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCT
T ss_pred CEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCC
Confidence 99999999999999999999999999999999999999999998887766555889999999999887776555444456
Q ss_pred CCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhh
Q psy10463 365 TEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVL 444 (605)
Q Consensus 365 ~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~ 444 (605)
..++.++.+.|++++++|++|+++|+|||.+.+||+||+||++|++++|+++.++|++.|+|.+|...||.++++.....
T Consensus 228 ~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~ 307 (501)
T 2ffu_A 228 VAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVF 307 (501)
T ss_dssp TSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCTTCHHHHH
T ss_pred CCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCcCCccchhHH
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999887766677
Q ss_pred hhhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCCcCCCC-Ccccccccccccc
Q psy10463 445 YGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHHFLPMD-DKFFGRIRHVQTH 523 (605)
Q Consensus 445 ~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~~~p~~-~~~~G~ir~~~~~ 523 (605)
.+|..|++++||++|+.++|..+| ..+..++|++++|++||++|+||+|+|||++|||++.+|.. ..++|+|++ ++
T Consensus 308 ~~n~~r~~~~w~d~~~~~~y~~~p-~~~~~~~g~~~~r~~lr~~l~c~~f~w~l~~v~p~~~~p~~~~~~~g~i~~--~~ 384 (501)
T 2ffu_A 308 ARNTRRAAEVWMDEYKNFYYAAVP-SARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQ--GT 384 (501)
T ss_dssp HHHHHHHHHHHCGGGHHHHHHHCG-GGGGCCCCCCHHHHHHHHHTTCCCHHHHHHHTCTTSCCCCCCCCCEEEEEE--TT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCc-ccccCCccchHHHHHHHHhcCCCCeEEehhccccccccccccccccccccc--cC
Confidence 899999999999999999999999 66788999999999999999999999999999999998875 468999998 79
Q ss_pred ccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCC-CcceEe
Q psy10463 524 KCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTY 602 (605)
Q Consensus 524 ~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q~W~~ 602 (605)
+|||+.+.. +|++|++|+| |+.++||.|.++ ..|+|++. ++|||+.+ +.+|+.|++++|+++. +|+|.+
T Consensus 385 ~Cld~~~~~-----~~~~v~l~~C-~g~~~nQ~w~~~-~~g~i~~~-~~Cld~~~--~~~g~~v~l~~C~~~~~~Q~W~~ 454 (501)
T 2ffu_A 385 NCLDTLGHF-----ADGVVGVYEC-HNAGGNQEWALT-KEKSVKHM-DLCLTVVD--RAPGSLIKLQGCRENDSRQKWEQ 454 (501)
T ss_dssp EEEECTTCC-----TTCCCEEEEC-CSSCGGGCEEEC-TTSCEEET-TEEEECSC--CSTTCBCEEEECCTTCGGGCEEE
T ss_pred ccccccCCC-----CCCEEEEEEc-CCCCcceEEEEe-cCCceeec-cccceecc--CCCCCeEEEEecCCCCcCceEEE
Confidence 999997643 4688999999 877779999999 88999974 59999974 3457899999999865 999998
Q ss_pred CC
Q psy10463 603 DK 604 (605)
Q Consensus 603 ~~ 604 (605)
+.
T Consensus 455 ~~ 456 (501)
T 2ffu_A 455 IE 456 (501)
T ss_dssp ET
T ss_pred EC
Confidence 64
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-75 Score=636.97 Aligned_cols=422 Identities=50% Similarity=0.971 Sum_probs=356.6
Q ss_pred eeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHH
Q psy10463 61 VSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS 140 (605)
Q Consensus 61 ~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~ 140 (605)
+||+|+++|++||+|++.|+...|+ ..+|++|||||+||++++.|.+||+|+++|++++..
T Consensus 1 ~s~~~~~~r~~~d~r~~~c~~~~~~-~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~------------------ 61 (472)
T 1xhb_A 1 ASEMIALNRSLPDVRLEGCKTKVYP-DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMI------------------ 61 (472)
T ss_dssp -------CCCCCCCSCGGGGTCCCC-SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGE------------------
T ss_pred CCccccCCCCCCCCCChhhccCcCC-cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHc------------------
Confidence 5899999999999999999999999 899999999999999878888888888887765532
Q ss_pred HHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHH
Q psy10463 141 LDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHS 220 (605)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~s 220 (605)
T Consensus 62 -------------------------------------------------------------------------------- 61 (472)
T 1xhb_A 62 -------------------------------------------------------------------------------- 61 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcCh
Q psy10463 221 VISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGW 300 (605)
Q Consensus 221 l~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~ 300 (605)
+|||||||+|+|+.+.+.++++.++++.++++++.++|.|+++|+|.|+++|+||||+|||+|+++.|+|
T Consensus 62 ----------~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~ 131 (472)
T 1xhb_A 62 ----------EEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGW 131 (472)
T ss_dssp ----------EEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTC
T ss_pred ----------eEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhccCCeEEEECCCeEeCccH
Confidence 3555555555554344456666666665799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEE
Q psy10463 301 LENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI 380 (605)
Q Consensus 301 L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i 380 (605)
|+++++.+.+++..+++|.++.++.+++.+........++++|.+.+.+...+.............++.++.+.|++|+|
T Consensus 132 L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i 211 (472)
T 1xhb_A 132 LEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSI 211 (472)
T ss_dssp HHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEE
T ss_pred HHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEE
Confidence 99999999999999999999999999888876666668899999999998887766555444556688899999999999
Q ss_pred eHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhhhhhHHHHHHHHhhhhH
Q psy10463 381 DRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWA 460 (605)
Q Consensus 381 ~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~~rn~~r~a~~W~d~~k 460 (605)
+|++|+++|||||.+.+||+||+||++|++++|+++.++|++.++|.++.+.++..+.+....+.+|..|++++|||+|+
T Consensus 212 rr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~ 291 (472)
T 1xhb_A 212 DRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFK 291 (472)
T ss_dssp EHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGG
T ss_pred EHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887766566789999999999999999
Q ss_pred hhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCCcCCCCCccccccccccccccccccccCCCCCCCCC
Q psy10463 461 EFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHHFLPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASG 540 (605)
Q Consensus 461 ~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~~~p~~~~~~G~ir~~~~~~CLD~~~~~~~~~~~g~ 540 (605)
.+||..+| .+...++|++++|++||++|+||+|+|||++|||++.+|....++|+|++.++++|||+.+. .+|+
T Consensus 292 ~~~~~~~p-~~~~~~~g~~~~~~~lr~~l~~~~f~w~l~~v~p~~~~p~~~~~~g~i~~~~~~~Cld~~~~-----~~g~ 365 (472)
T 1xhb_A 292 NFFYIISP-GVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMAR-----KENE 365 (472)
T ss_dssp HHHHHTST-TGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTCTTCSSCSSEEEEECEEETTTCEEEECTTC-----CTTE
T ss_pred HHHHhhCc-ccccCCCCCHHHHHHHHHhcCCCCccchhhhhhhhhcccccccccceEEECCCCccccccCC-----CCCC
Confidence 99999999 66789999999999999999999999999999999999988789999999999999998763 3478
Q ss_pred CeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCC-CcceEeCC
Q psy10463 541 PASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYDK 604 (605)
Q Consensus 541 ~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q~W~~~~ 604 (605)
+|++|+| |+.++||+|+++ ..|+|+..+ +|||+. .+|+.|++++|++.+ +|+|.++.
T Consensus 366 ~v~l~~C-~~~~~nQ~w~~~-~~g~i~~~~-~Cld~~----~~g~~v~l~~C~~~~~~Q~W~~~~ 423 (472)
T 1xhb_A 366 KVGIFNC-HGMGGNQVFSYT-ANKEIRTDD-LCLDVS----KLNGPVTMLKCHHLKGNQLWEYDP 423 (472)
T ss_dssp ECEEEEC-CSCCGGGCEEEE-TTSCEEETT-EEEECC----STTCCCEEEECCTTCGGGCEEEET
T ss_pred eEEEEeC-CCCCcceeEEEc-ccceeeecc-eEEeec----CCCceEEEEeCCCCCcCceEEEeC
Confidence 9999999 887889999999 889999754 999987 247899999999944 99999864
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-75 Score=644.41 Aligned_cols=430 Identities=41% Similarity=0.811 Sum_probs=368.6
Q ss_pred HHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEE
Q psy10463 48 AQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILL 127 (605)
Q Consensus 48 ~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~Eiiv 127 (605)
.++.|++++||+++||+|++.|++|++|++.|....|+ ..+|+||||||+||++++.|.+||+||++|+++++.
T Consensus 71 ~~~~~~~~~~n~~~sd~i~l~R~~~d~r~~~~~~~~~~-~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~----- 144 (570)
T 2d7i_A 71 VDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYL-ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELV----- 144 (570)
T ss_dssp SSHHHHTTSSCHHHHHTSCTTCCCCCCSCGGGGTCCEE-SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGE-----
T ss_pred HHHHHHHcCCCHHHHhccCCCccCCCCCCccceecccC-CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCc-----
Confidence 46789999999999999999999999999999999888 889999999999999877777777777777765532
Q ss_pred EeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEee
Q psy10463 128 VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFH 207 (605)
Q Consensus 128 vdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~ 207 (605)
T Consensus 145 -------------------------------------------------------------------------------- 144 (570)
T 2d7i_A 145 -------------------------------------------------------------------------------- 144 (570)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEE
Q psy10463 208 NEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEIL 287 (605)
Q Consensus 208 n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i 287 (605)
+|||||||+|+|+++.+.++++.++++ +|++++.++|.|+++|+|.|+++|+||||
T Consensus 145 -----------------------~EIIVVDDgS~D~tl~~~l~~~~~~~~-~v~vi~~~~n~G~~~A~N~G~~~A~gd~i 200 (570)
T 2d7i_A 145 -----------------------AEIVLVDDFSDREHLKKPLEDYMALFP-SVRILRTKKREGLIRTRMLGASVATGDVI 200 (570)
T ss_dssp -----------------------EEEEEEECSCCCGGGTHHHHHHHTTST-TEEEEECSSCCCHHHHHHHHHHHCCSSEE
T ss_pred -----------------------EEEEEEECCCCcHHHHHHHHHHHHhCC-eEEEEECCCCCCHHHHHHHHHHhcCCCEE
Confidence 355555555555443445566666665 89999999999999999999999999999
Q ss_pred EEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecc-cccceeeeeccceeeEeecCchhHhhhccCCCC
Q psy10463 288 VFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRS-FELHWGAFNWELHFRWYTYGSSDAIIKRKDFTE 366 (605)
Q Consensus 288 ~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~-~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 366 (605)
+|||+|+++.|+||++|++.+.+++..+++|.++.++.+++.+... .....+.++|.+.+.+....... .......
T Consensus 201 ~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 277 (570)
T 2d7i_A 201 TFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPEL---QKADPSD 277 (570)
T ss_dssp EECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTT---CCSSTTS
T ss_pred EEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhh---hccCCCc
Confidence 9999999999999999999999999999999999999988887664 33347889998888776655421 1223456
Q ss_pred ccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhhhh
Q psy10463 367 PFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVLYG 446 (605)
Q Consensus 367 ~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~~r 446 (605)
++.++.++|++++|+|++|+++|||||.|.+||+||+||++|++++|+++.++|++.|+|.++.+.|+..+.. ..+.+
T Consensus 278 ~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~--~~~~~ 355 (570)
T 2d7i_A 278 PFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAG--VSLAR 355 (570)
T ss_dssp CEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSS--CCHHH
T ss_pred ceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCch--hhhHH
Confidence 7788999999999999999999999999999999999999999999999999999999999998888876653 56889
Q ss_pred hHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCCc--CCC---CCcccccccccc
Q psy10463 447 NLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHHF--LPM---DDKFFGRIRHVQ 521 (605)
Q Consensus 447 n~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~~--~p~---~~~~~G~ir~~~ 521 (605)
|..|++++||++|+++||..+| .++.+++|++++|++||++|+||+|+|||++|+|++. +|. ...++|+|++.+
T Consensus 356 n~~r~~~~W~d~~~~~~y~~~p-~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~~~~~~~~p~~~~~~~~~G~irn~~ 434 (570)
T 2d7i_A 356 NLKRVAEVWMDEYAEYIYQRRP-EYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVG 434 (570)
T ss_dssp HHHHHHHHHCGGGHHHHHTTCG-GGTTSCCCCCHHHHHHHHHHTCCCHHHHHHHTSTTHHHHSCSSCCCCSEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHhcCc-ccccCCccchHHHHHHHHHcCCCCcHHHHHHhhhhcccccCcccccccccceeeecc
Confidence 9999999999999999999999 7788999999999999999999999999999999973 332 346889999999
Q ss_pred ccccccccccCCCCCCCCCCeEEeecCCCC------CcceEEEEecCCceeec-----CCCeeeecCCCCCCCCCceEEE
Q psy10463 522 THKCVEKPLAKGSMNQASGPASLLPCTHLP------VLTQMFVMKLPTDLIAT-----DESVCLDVPEYENDISPRVRIL 590 (605)
Q Consensus 522 ~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~------~~nQ~w~~~~~~g~i~~-----~~~~CLd~~~~~~~~g~~v~l~ 590 (605)
+++|||+.+. .+|++|++|+| |+. ++||+|+++ ..|+|+. .+++|||+.+ +|++|+++
T Consensus 435 s~~CLD~~~~-----~~g~~v~l~~C-~g~~~~~~~~~nQ~w~~t-~~g~ir~~~~~~~~~~CLd~~~----~g~~v~l~ 503 (570)
T 2d7i_A 435 TGLCADTKHG-----ALGSPLRLEGC-VRGRGEAAWNNMQVFTFT-WREDIRPGDPQHTKKFCFDAIS----HTSPVTLY 503 (570)
T ss_dssp TCCEECCCSC-----TTTCCCCEECC-CTTCSCGGGCCCCCEEEC-TTSCEEESCTTSCCSBCCBCCS----SSSBCBCC
T ss_pred cCccccccCC-----CCCCeEEEEEC-CCCCcCCCCCCCceEEEe-cCCceeecccccCCCcceeecC----CCCeEEEE
Confidence 9999999764 34789999999 662 789999999 8899985 5679999975 36799999
Q ss_pred eCCCCC-CcceEeCC
Q psy10463 591 ACSGFN-RQRWTYDK 604 (605)
Q Consensus 591 ~C~~~~-~Q~W~~~~ 604 (605)
+|+++. ||+|.++.
T Consensus 504 ~C~~~~~nQ~W~~~~ 518 (570)
T 2d7i_A 504 DCHSMKGNQLWKYRK 518 (570)
T ss_dssp BCCSSSSTTCCEECT
T ss_pred eCCCCCcCCeEEECC
Confidence 999954 99999863
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=371.89 Aligned_cols=334 Identities=18% Similarity=0.184 Sum_probs=251.1
Q ss_pred ccceeec------cccCCCCCCCCCCccccc-----------ccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCc
Q psy10463 57 FNLLVSD------RIPVNRTLPDVRKPKCKT-----------KVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPR 119 (605)
Q Consensus 57 ~n~~~~~------~~~~~r~~~~~r~~~~~~-----------~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~ 119 (605)
.|+.+.+ ..+++|.++......|.. ..++...+|.+|||||+||++ +.|.+||+|++.|+++
T Consensus 43 ~~~~~~~~~~ip~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~vsviIp~~n~~-~~l~~~l~sl~~q~~~ 121 (625)
T 2z86_A 43 ERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVIPTYNRA-KILAITLACLCNQKTI 121 (625)
T ss_dssp EECCCCCCCSSCTTCCTTCCCCCCCSSTTCHHHHHTCCCC-------CCCCCEEEEEEESSCH-HHHHHHHHHHHTCCCS
T ss_pred ccccccccCCCCCCCcccCCCCCCCCCccccchhhhcccccCCCcccccCCcEEEEEecCCcH-HHHHHHHHHHHhhccC
Confidence 5565555 566666665544433321 111224579999999999998 9999999999999765
Q ss_pred cCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCC-cchHHHHHHHhhhccCceEEEecCcccc----------
Q psy10463 120 SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCEC---------- 188 (605)
Q Consensus 120 ~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~G~~~a~n~g~~~a~g~~i~~lD~d~~~---------- 188 (605)
. .+|||||||||+|+|. ++++++.. ...++++..+.+ .|++.|+|.|++.|+|+|++|+|+|+.+
T Consensus 122 ~-~~eiivvDd~s~d~t~-~~~~~~~~--~~~i~~i~~~~~~~g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~ 197 (625)
T 2z86_A 122 Y-DYEVIVADDGSKENIE-EIVREFES--LLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYME 197 (625)
T ss_dssp S-CEEEEEEEESCSSCHH-HHHHTTTT--TSCEEEEEECCCSCCHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHH
T ss_pred C-CeEEEEEeCCCchhHH-HHHHHhhh--cCCeEEEEeCCCCcchhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHH
Confidence 3 3899999999999973 33444321 245888887754 4799999999999999999999999711
Q ss_pred -------------------cc-----------------------------------cc--------------------cc
Q psy10463 189 -------------------TL-----------------------------------VF--------------------NE 194 (605)
Q Consensus 189 -------------------~~-----------------------------------~~--------------------~~ 194 (605)
.. .| ..
T Consensus 198 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (625)
T 2z86_A 198 LLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFS 277 (625)
T ss_dssp HHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCC
T ss_pred HHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEe
Confidence 00 00 00
Q ss_pred --------------------------------------------------------------------------------
Q psy10463 195 -------------------------------------------------------------------------------- 194 (605)
Q Consensus 195 -------------------------------------------------------------------------------- 194 (605)
T Consensus 278 g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 357 (625)
T 2z86_A 278 GGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETDRAAGKNITVQLLQQKVP 357 (625)
T ss_dssp TTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGGCEEEECCC----------------CTTTTTCT
T ss_pred eceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccchhhccCCccccchhhhhhcccchhhhcccCcc
Confidence
Q ss_pred --------------ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCE
Q psy10463 195 --------------EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPT 260 (605)
Q Consensus 195 --------------~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v 260 (605)
..+|+||||||+||++ ..|.+||.|+++|+++. +|||||||||+|++ .+.++++.++.+ ++
T Consensus 358 ~~~rk~~~~~~~~~~~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t-~~~~~~~~~~~~-~i 432 (625)
T 2z86_A 358 YFYRKKEKIESATLKRVPLVSIYIPAYNCS-KYIVRCVESALNQTITD--LEVCICDDGSTDDT-LRILQEHYANHP-RV 432 (625)
T ss_dssp TTTCCCCCTTTCCCCSSCSEEEEEEESSCT-TTHHHHHHHHHSSSCCS--EEEEEEEESCSSSH-HHHHHHHHTTCT-TE
T ss_pred eEEecccccccchhccCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCCC--eEEEEEECcCChhH-HHHHHHHHhhCC-cE
Confidence 1257899999999999 99999999999999876 79999999999985 447777777776 89
Q ss_pred EEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEeccccccee
Q psy10463 261 RVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWG 339 (605)
Q Consensus 261 ~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g 339 (605)
+++. ..|.|++.|+|.|++.|+||||+|||+|+.+.|+||+.+++.+.+++ .+++++....++.+..... .
T Consensus 433 ~~~~-~~n~G~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~ 504 (625)
T 2z86_A 433 RFIS-QKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLIS-------N 504 (625)
T ss_dssp EEEE-ECCCCHHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEE-------E
T ss_pred EEEe-CCCCCHHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEec-------c
Confidence 9997 67899999999999999999999999999999999999999997654 4666665444443322111 1
Q ss_pred eeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 340 AFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
++.|. ..... .+....+.|++++++|+.|+++||||+.+. ++||+||++|+.+.| ++.++
T Consensus 505 ~~~~~------~~~~~-----------~~~~~~~~~~~~~~~r~~~~~~ggfd~~~~--~~eD~dl~~r~~~~g-~~~~~ 564 (625)
T 2z86_A 505 GYNWP------IYSRE-----------KLTSAMICHHFRMFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG-PFKHI 564 (625)
T ss_dssp CCCCS------SCCHH-----------HHTTSCCCCSCEEEEHHHHTTTTCCCSSCS--SCHHHHHHHHHTTTS-CEEEE
T ss_pred Ccccc------cCCHH-----------HHhhcccCCceEEEEHHHHHHhCCCCCccC--ChHHHHHHHHHHHhC-CEEEe
Confidence 11110 00000 011234667788999999999999999987 479999999999999 99999
Q ss_pred cceEEEEEc
Q psy10463 420 PCSHVAHLF 428 (605)
Q Consensus 420 p~s~v~H~~ 428 (605)
|...+.|..
T Consensus 565 ~~~~~~~r~ 573 (625)
T 2z86_A 565 NKICYNRVL 573 (625)
T ss_dssp EEEEEEEEC
T ss_pred CCcEEEEEE
Confidence 998766543
|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-29 Score=244.88 Aligned_cols=213 Identities=17% Similarity=0.210 Sum_probs=149.3
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
.+|+||||||+||++ +.|.+||.|+++|+++. +|||||||||+|++ .+.++++.++++ ++++++ .+|.|++.|+
T Consensus 3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t-~~~~~~~~~~~~-~i~~i~-~~n~G~~~a~ 76 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNC-PKICDDYAAQYP-NIKVIH-KKNAGLGMAC 76 (240)
T ss_dssp CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSH-HHHHHHHHHHCS-SEEEEE-CCCCCHHHHH
T ss_pred CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCH-HHHHHHHHhhCC-CEEEEE-CCCCChHHHH
Confidence 368999999999999 99999999999999876 79999999999985 557888888888 899997 5689999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcC-CcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCc
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAED-RTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~-~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
|.|++.|+|+||+|||+|+.+.|+||+.+++.+.++ ...++++.. .++.+.... ..... . ......+ ..
T Consensus 77 N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~-~~~~~~~~~-~~~~~-~-----~~~~~~~--~~ 146 (240)
T 3bcv_A 77 NSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLK-RITMAGIPT-GTVTH-Q-----KEFKLYK--NK 146 (240)
T ss_dssp HHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC----------------------------CEEEC--SH
T ss_pred HHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeE-EEccCCccc-ccccc-c-----ccccccc--CH
Confidence 999999999999999999999999999999999874 344444332 222211000 00000 0 0000000 10
Q ss_pred hhHhhhccCC--CCcc----ccccccceEEEEeHHHHhHhC-CCCcccccccchhhHHHHHHHHcCCeEEEecceEEE
Q psy10463 355 SDAIIKRKDF--TEPF----KTPAMAGGLFAIDRAYFFHIG-AYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425 (605)
Q Consensus 355 ~~~~~~~~~~--~~~~----~~~~~~G~~~~i~r~~f~~iG-gfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~ 425 (605)
.......... ..+. ....+++++++++|++|+++| +||+.+.. .+||+||++|++..|+++.++|.+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~-~~eD~~~~~r~~~~g~~i~~~~~~~~~ 223 (240)
T 3bcv_A 147 NEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERIL-PSEDLIFNVDVLANSNIVCVLPQTFYN 223 (240)
T ss_dssp HHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTC-TTHHHHHHHHHHTTCSCEEECC-----
T ss_pred HHHHHHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCc-cCCCHHHHHHHHHhCCEEEEECCCeEE
Confidence 0000000000 0000 011245778899999999999 99999765 369999999999999999999998443
|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=236.18 Aligned_cols=198 Identities=12% Similarity=0.085 Sum_probs=155.2
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC--------CCC
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP--------GRV 269 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~--------~n~ 269 (605)
|+||||||+||++ +.|.+||.|+++|+++. +|||||||||+|++ .+.++++.+ .+ ++++++.+ .|.
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t-~~~~~~~~~-~~-~i~~i~~~~~~~~~~~~n~ 74 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEET-LNVIRPFLN-DN-RVRFYQSDISGVKERTEKT 74 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHH-HHHHGGGGG-ST-TEEEEECCCCSHHHHHSSC
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchH-HHHHHHHhh-cC-CEEEEeccccccccccccc
Confidence 7899999999999 99999999999999876 79999999999985 446666654 44 89999998 899
Q ss_pred ChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcC-CcEEEeeeEeee--cCCeeEEecccccceeeeeccce
Q psy10463 270 GLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAED-RTRVVCPVIDII--SDVTFAYVRSFELHWGAFNWELH 346 (605)
Q Consensus 270 G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~-~~~vv~p~i~~i--~~~~~~~~~~~~~~~g~~~~~l~ 346 (605)
|.+.|+|.|++.|+|+||+|+|+|+.+.|+||+.+++.+.++ ...++++....+ +........ .
T Consensus 75 G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~------ 141 (255)
T 1qg8_A 75 RYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKE-------T------ 141 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEE-------E------
T ss_pred CHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhh-------c------
Confidence 999999999999999999999999999999999999999876 456666665443 222111000 0
Q ss_pred eeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhC-CC------CcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 347 FRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIG-AY------DEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG-gf------De~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
..... . ........+.|++++++|++|+++| +| |+.+. .+||+||++|+.+.| ++.++
T Consensus 142 --~~~~~-~---------~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~--~~eD~~~~~r~~~~g-~~~~~ 206 (255)
T 1qg8_A 142 --VRPAA-Q---------VTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFY--RIGDARFFWRVNHFY-PFYPL 206 (255)
T ss_dssp --EECCC-S---------CBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGS--TTHHHHHHHHHTTTC-CBEEE
T ss_pred --cCchH-H---------HHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccc--hHHHHHHHHHHHHhC-CEEEe
Confidence 00000 0 0001233566788999999999999 88 66664 589999999999987 79999
Q ss_pred cceEEEEEcc
Q psy10463 420 PCSHVAHLFR 429 (605)
Q Consensus 420 p~s~v~H~~r 429 (605)
|.+.+.|..+
T Consensus 207 ~~~~~~~r~~ 216 (255)
T 1qg8_A 207 DEELDLNYIT 216 (255)
T ss_dssp EEEEEEEEEC
T ss_pred cCcEEEEEEc
Confidence 9998887654
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=267.40 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=172.1
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCC-CCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPR-SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~-~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
+..|+||||||+||+. +.|.+||.|+++|++. ...+|||||||||+|++....+.++.+....+|++|+++ |.|+++
T Consensus 177 ~~~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~-N~G~a~ 254 (657)
T 4fix_A 177 PGTANIAVGIPTFNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP-NLGGSG 254 (657)
T ss_dssp CSCCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC-CCHHHH
T ss_pred CCCCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC-CCCHHH
Confidence 4568999999999999 9999999999999851 122699999999998532212223333322389999988 999999
Q ss_pred HHHHHHhhcc----CCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceee
Q psy10463 274 ARLLGARQAE----GEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFR 348 (605)
Q Consensus 274 arN~G~~~A~----gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~ 348 (605)
|+|.|++.|. +|||+|||+|+++.|+||+.+++.+..++. ++++|.+...+........+ +.+++ ..+.
T Consensus 255 a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g-----~~~~~-~~~~ 328 (657)
T 4fix_A 255 GYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMG-----EVVDR-SIFM 328 (657)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSC-----EEEET-TTTE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecc-----cEecc-cccc
Confidence 9999999994 589999999999999999999999988654 67887765444432211100 00111 0111
Q ss_pred EeecCchhHh------------hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 349 WYTYGSSDAI------------IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 349 ~~~~~~~~~~------------~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
+...+..... ................|++++|+|++|+++|+||+ ++++ +||+|||+|+++.|+++
T Consensus 329 ~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~-~F~~-~ED~Dl~lR~~~~G~ki 406 (657)
T 4fix_A 329 WTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP-LFIK-WDDADYGLRAAEHGYPT 406 (657)
T ss_dssp EEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS-CSSS-SHHHHHHHHHHHTTCCE
T ss_pred ccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh-Hhcc-CcHHHHHHHHHHcCCeE
Confidence 1111110000 00000112334557788999999999999999994 5554 69999999999999999
Q ss_pred EEecceEEEEEcccCCCCCCCCCcchhhhhhHHHHHHHHh
Q psy10463 417 EIAPCSHVAHLFRKASPYSFPGGVSEVLYGNLARVALVWM 456 (605)
Q Consensus 417 ~~~p~s~v~H~~r~~~~~~~~~~~~~~~~rn~~r~a~~W~ 456 (605)
.++|.+.|+|......... .........||...+..++.
T Consensus 407 ~~~p~a~V~H~~~~~~~~~-s~~r~Yy~~RN~l~~~~k~~ 445 (657)
T 4fix_A 407 VTLPGAAIWHMAWSDKDDA-IDWQAYFHLRNRLVVAAMHW 445 (657)
T ss_dssp EEEEEEEEEECCSSSSCCT-TSTHHHHHHHHHHHHHHHHC
T ss_pred EEECCEEEEEcCcCccccc-cHHHHHHHHHHHHHHHHHhC
Confidence 9999999999543221111 11233456777777766654
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-26 Score=256.49 Aligned_cols=228 Identities=20% Similarity=0.264 Sum_probs=163.1
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC-CChHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR-VGLIK 273 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n-~G~~~ 273 (605)
..+|+||||||+||++ ..|.++|.|+++|+++. .+|||||||||+|++ .+.++++.+. + ++++++.+.+ .|.++
T Consensus 90 ~~~p~vsviIp~~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t-~~~~~~~~~~-~-~i~~i~~~~~~~g~~~ 164 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENI-EEIVREFESL-L-NIKYVRQKDYGYQLCA 164 (625)
T ss_dssp CCCCCEEEEEEESSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCH-HHHHHTTTTT-S-CEEEEEECCCSCCHHH
T ss_pred ccCCcEEEEEecCCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhH-HHHHHHhhhc-C-CeEEEEeCCCCcchhH
Confidence 4578999999999999 99999999999997653 389999999999984 4455555322 2 6888887653 46999
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEec---ccc------------cc
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVR---SFE------------LH 337 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~---~~~------------~~ 337 (605)
|+|.|++.|+|+||+|+|+|+.+.|+||+.+++.+.+++. .++++... .+.....+.. ... ..
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKY-IDTSKHTYLDFLSQKSLINEIPEIITNNQV 243 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEE-ECCTTCCHHHHHHSTTGGGTSCC-------
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeee-ccCcccchhhcccchHHhhhcchhccCCch
Confidence 9999999999999999999999999999999999987665 55555442 2222110000 000 00
Q ss_pred eeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEE
Q psy10463 338 WGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIE 417 (605)
Q Consensus 338 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~ 417 (605)
.|.+.+.....|.. ..................+.|++++++|++|+++||||+.+..||+||+||++|++++|+++.
T Consensus 244 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~ 320 (625)
T 2z86_A 244 AGKVEQNKSVDWRI---EHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFR 320 (625)
T ss_dssp --------CCCTHH---HHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEE
T ss_pred hhhhccCCccccch---hhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEE
Confidence 01000000000000 000000011122233456889999999999999999999999998999999999999999999
Q ss_pred EecceEEEEEcccC
Q psy10463 418 IAPCSHVAHLFRKA 431 (605)
Q Consensus 418 ~~p~s~v~H~~r~~ 431 (605)
++|++.++|..+..
T Consensus 321 ~~p~~~v~H~~~~~ 334 (625)
T 2z86_A 321 SVEGAMAYHQEPPG 334 (625)
T ss_dssp ECGGGCEEEECCC-
T ss_pred EcccchhhccCCcc
Confidence 99999999997654
|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=208.05 Aligned_cols=185 Identities=12% Similarity=0.031 Sum_probs=132.6
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCC-CCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~-~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~a 274 (605)
..|.+||| |+||+. +.|.+||+|+.+... ... +|||||||+|+|. .|++.|
T Consensus 14 ~~~~iSII-~~yN~~-~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~-------------------------~g~a~a 65 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQ-AKYDRLLESFERFGFTPDK-AEFLAADNREGNQ-------------------------FHGFSW 65 (249)
T ss_dssp CCCSEEEE-EEESCH-HHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS-------------------------CCTTTH
T ss_pred CcceEEEE-EeeCCH-HHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc-------------------------ccHHHH
Confidence 45789975 679998 999999998865321 112 7999999999751 478999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc-----CCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE-----DRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~-----~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
+|.|++.|+||||+|||+|++++++||+.|++.+++ ...++++|.....+.. +.... .....+
T Consensus 66 ~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~-----g~~~~-~~~~~~------ 133 (249)
T 2nxv_A 66 HKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPL-----NHSVT-AQALHI------ 133 (249)
T ss_dssp HHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCS-----CTTSC-CCEEEE------
T ss_pred HHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCC-----Cceee-eccccc------
Confidence 999999999999999999999999999999999987 3346677654322210 00000 000000
Q ss_pred eecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 350 YTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
..+... ..... ..+..++.+.|++|+++|++ +|||||.+..|..||+|||+|++++|+++.+.|. .+.|..
T Consensus 134 -~~~~~~-~~~~~--~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~-~v~H~~ 204 (249)
T 2nxv_A 134 -SDVFGN-DRRRG--NVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDF-HLHHYG 204 (249)
T ss_dssp -EETTEE-EEEES--CSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCC-CCEECC
T ss_pred -CCcccc-ccccC--CCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEecc-EEEECC
Confidence 000000 00000 23445667889999999999 7899998876667999999999999999999985 488865
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-24 Score=232.78 Aligned_cols=134 Identities=16% Similarity=0.278 Sum_probs=91.4
Q ss_pred HhhhhHhhhhccCchhhcc---CCccchHHHHHHhhhcCCccccc----ccccccCCCcCCCCCc----ccccccccccc
Q psy10463 455 WMDEWAEFYFKFNPEAEKQ---RDKQAVRSRLELRKQLKCHSFKW----YLTHVWPHHFLPMDDK----FFGRIRHVQTH 523 (605)
Q Consensus 455 W~d~~k~~~~~~~p~~~~~---~~~g~~~~r~~lr~~l~ck~f~w----yl~~v~p~~~~p~~~~----~~G~ir~~~~~ 523 (605)
-++.|+||+.+.+|+.... ...|.+... ..-.|-.-.- ---.++||+....++. ..|+|++ ++
T Consensus 320 ~~~~f~w~l~~v~p~~~~p~~~~~~g~i~~~----~~~~Cld~~~~~~g~~v~l~~C~~~~~nQ~w~~~~~g~i~~--~~ 393 (472)
T 1xhb_A 320 QCKPFSWYLENIYPDSQIPRHYFSLGEIRNV----ETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTANKEIRT--DD 393 (472)
T ss_dssp TCCCHHHHHHHTCTTCSSCSSEEEEECEEET----TTCEEEECTTCCTTEECEEEECCSCCGGGCEEEETTSCEEE--TT
T ss_pred CCCCccchhhhhhhhhcccccccccceEEEC----CCCccccccCCCCCCeEEEEeCCCCCcceeEEEcccceeee--cc
Confidence 4678999999999964321 223444221 1123432111 1123688876554442 3488886 57
Q ss_pred ccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCCCCCCcceEe
Q psy10463 524 KCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACSGFNRQRWTY 602 (605)
Q Consensus 524 ~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~ 602 (605)
+|||+. .+|+.|.+|+| ++.++||+|.++..+|.|++ .+++|||+.+ +++|+.|++++|+++.+|+|.+
T Consensus 394 ~Cld~~-------~~g~~v~l~~C-~~~~~~Q~W~~~~~~g~i~~~~sg~CLd~~~--~~~~~~~~~~~C~~~~~Q~W~~ 463 (472)
T 1xhb_A 394 LCLDVS-------KLNGPVTMLKC-HHLKGNQLWEYDPVKLTLQHVNSNQCLDKAT--EEDSQVPSIRDCTGSRSQQWLL 463 (472)
T ss_dssp EEEECC-------STTCCCEEEEC-CTTCGGGCEEEETTTTEEEESSSCEEEESCC--SSSTTSCEEEECCCCGGGCEEE
T ss_pred eEEeec-------CCCceEEEEeC-CCCCcCceEEEeCCCCeEEeCCCCeeEcccc--CCCCCeEEEEeCCCCCcceEEE
Confidence 999986 13689999999 66678999999933788875 5789999984 3458899999999777999998
Q ss_pred CC
Q psy10463 603 DK 604 (605)
Q Consensus 603 ~~ 604 (605)
..
T Consensus 464 ~~ 465 (472)
T 1xhb_A 464 RN 465 (472)
T ss_dssp CC
T ss_pred eC
Confidence 63
|
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=239.42 Aligned_cols=217 Identities=16% Similarity=0.106 Sum_probs=156.9
Q ss_pred cccCCcceEEEEeechhhHHH-HHHHHHHHhcCCCCCceeEEEeeCCCChHHH--------------HHHHHHHHHHCCC
Q psy10463 194 EEFLPKSSIVIVFHNEAWSAL-LRTVHSVISRSPRSMLKEILLVDDASTREFL--------------KSSLDEYVAKLSV 258 (605)
Q Consensus 194 ~~~~p~vSVIIp~~n~~~~~l-~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~--------------~~~l~~~~~~~~~ 258 (605)
++..|+||||||+||++ ..+ .+||+|+++|++++..+|||||||||+|++. .+.++++.++.
T Consensus 136 ~~~~P~VSViIPtyNe~-~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~-- 212 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEP-ADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL-- 212 (802)
T ss_dssp TTTCCCEEEEEECTTCC-HHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ccCCCcEEEEEEECCCC-HHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc--
Confidence 34579999999999999 655 8899999999988766799999999999873 33455555554
Q ss_pred CEEEEeCCCC-CChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEeccccc
Q psy10463 259 PTRVIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFEL 336 (605)
Q Consensus 259 ~v~~i~~~~n-~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~ 336 (605)
+++++..+++ .|.++|+|.|++.|+||||+|+|+|+.++|+||+.+++.+.+++ .+++++.....+++.+...
T Consensus 213 ~v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~----- 287 (802)
T 4hg6_A 213 GVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRN----- 287 (802)
T ss_dssp TCEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHH-----
T ss_pred CcEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhh-----
Confidence 4777776665 78999999999999999999999999999999999999997654 4566554433333211100
Q ss_pred ceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 337 HWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 337 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
.+.+.. .....................+.+.|+++++||++|+++||||+... .||.|+++|+.+.|+++
T Consensus 288 -~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~~~~---~ED~~l~~rl~~~G~ri 357 (802)
T 4hg6_A 288 -LALGDR------CPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGETI---TEDAETALEIHSRGWKS 357 (802)
T ss_dssp -HTCCTT------SCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCCSSS---SHHHHHHHHHHTTTCCE
T ss_pred -hhHHhh------hhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcCCCCc---chHHHHHHHHHHcCCeE
Confidence 000000 00000000000000000112234678899999999999999998764 69999999999999999
Q ss_pred EEecceEEEEEc
Q psy10463 417 EIAPCSHVAHLF 428 (605)
Q Consensus 417 ~~~p~s~v~H~~ 428 (605)
.++|.+.++|..
T Consensus 358 ~~~~~~~~~~~~ 369 (802)
T 4hg6_A 358 LYIDRAMIAGLQ 369 (802)
T ss_dssp EECCCCCEEECC
T ss_pred EEecCCEEEecC
Confidence 999999998864
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-25 Score=253.77 Aligned_cols=205 Identities=13% Similarity=0.162 Sum_probs=0.0
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 276 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN 276 (605)
||+||||||+||++ +.|.+||.|+++|++++ +|||||||||+|++ .++++++.++++.+|+++++++|.|.++|+|
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t-~~il~~~~~~~~~~i~~i~~~~n~G~~~arN 76 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQS-KKLMDEAIKDYDKNIRFIDLDENSGHAHARN 76 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcH-HHHHHHHHHhCCCCEEEEECCCCCCHHHHHH
Confidence 58999999999999 99999999999999876 79999999999985 4578888877666899999999999999999
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
.|++.|+|+||+|||+|+.+.|+||+.+++.+. +...++++.....+... .... ..... ..+....
T Consensus 77 ~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~~~~~~~~~-~~~~-----~~~~~----~~~~~~~--- 142 (729)
T 3l7i_A 77 IALEEVETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPIHSFTTQRP-QFVD-----LDRVR----VEYFNAK--- 142 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEeeEEeecCCC-cccc-----cccee----eeeecch---
Confidence 999999999999999999999999999999998 44444444321111100 0000 00000 0000000
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhC-CCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIG-AYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG-gfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
...... .....+++++++|++|.++| +||+.+. .+||+||++|+...|.++.++|...++|..
T Consensus 143 -----~~~~~~--~~~~~~~~~~~rr~~l~~~gl~fde~~~--~~ED~d~~~rl~~~g~~i~~~~~~~~~~yr 206 (729)
T 3l7i_A 143 -----ENINSF--LRKQSACNIIFRTAIVRAHHIRFNENLN--TYVDWSFVLEYMKYVNKFVRIFNFPFYFRG 206 (729)
T ss_dssp -------------------------------------------------------------------------
T ss_pred -----hhHHHH--hhccchhheeeeHHHHHHcCCCcCCCCC--cccCHHHHHHHHHhcCCEEEecCcEEEEEE
Confidence 000000 11345667899999999999 8999986 389999999999999999999555555544
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.4e-23 Score=225.11 Aligned_cols=132 Identities=14% Similarity=0.162 Sum_probs=92.0
Q ss_pred hhhhHhhhhccCchhhc----cCCccchHHHHHHhhhcCCcccccc----cccccCCCcCCCCCc----ccccccccccc
Q psy10463 456 MDEWAEFYFKFNPEAEK----QRDKQAVRSRLELRKQLKCHSFKWY----LTHVWPHHFLPMDDK----FFGRIRHVQTH 523 (605)
Q Consensus 456 ~d~~k~~~~~~~p~~~~----~~~~g~~~~r~~lr~~l~ck~f~wy----l~~v~p~~~~p~~~~----~~G~ir~~~~~ 523 (605)
++.|+||+.+++|+... ....|.+.. .-.|-.-.-- --.++||+....++. ..|+|++ ++
T Consensus 353 c~~f~w~l~~v~p~~~~p~~~~~~~g~i~~------~~~Cld~~~~~~~~~v~l~~C~g~~~nQ~w~~~~~g~i~~--~~ 424 (501)
T 2ffu_A 353 CKPFKWYLENVYPELRVPDHQDIAFGALQQ------GTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKEKSVKH--MD 424 (501)
T ss_dssp CCCHHHHHHHTCTTSCCCCCCCCCEEEEEE------TTEEEECTTCCTTCCCEEEECCSSCGGGCEEECTTSCEEE--TT
T ss_pred CCCeEEehhccccccccccccccccccccc------cCccccccCCCCCCEEEEEEcCCCCcceEEEEecCCceee--cc
Confidence 67899999999996421 233466633 2234322100 023688876554442 3488885 68
Q ss_pred ccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCCCCCCcceEe
Q psy10463 524 KCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACSGFNRQRWTY 602 (605)
Q Consensus 524 ~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~ 602 (605)
+|||+.+. .+|++|.+|+| |+.++||+|.++..+|.|.+ .+++|||+.. ++|+.|++++|+++.+|+|.+
T Consensus 425 ~Cld~~~~-----~~g~~v~l~~C-~~~~~~Q~W~~~~~~~~i~~~~sg~CLd~~~---~~~~~~~~~~C~~~~~Q~W~~ 495 (501)
T 2ffu_A 425 LCLTVVDR-----APGSLIKLQGC-RENDSRQKWEQIEGNSKLRHVGSNLCLDSRT---AKSGGLSVEVCGPALSQQWKF 495 (501)
T ss_dssp EEEECSCC-----STTCBCEEEEC-CTTCGGGCEEEETTTTEEEETTSSEEEECTT---GGGTSCEEEECCSCGGGCCEE
T ss_pred ccceeccC-----CCCCeEEEEec-CCCCcCceEEEECCCCeEEeCCCCeEEeeec---CCCCeEEEEeCCCCCcceEEE
Confidence 99998632 35789999999 77678999999933788865 6789999872 346799999998766999998
Q ss_pred CC
Q psy10463 603 DK 604 (605)
Q Consensus 603 ~~ 604 (605)
..
T Consensus 496 ~~ 497 (501)
T 2ffu_A 496 TL 497 (501)
T ss_dssp EE
T ss_pred eC
Confidence 64
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-22 Score=209.58 Aligned_cols=212 Identities=16% Similarity=0.096 Sum_probs=138.6
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEE-eCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVI-RSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i-~~~~n~G~~~a 274 (605)
..|+||||||+||++ ..|.++|.|+++|+++. .+|||||||||+|++.+ .++++..+...+++++ ..+.|.|++.|
T Consensus 46 ~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~-~~~~~~~~~~~~~~~~~~~~~n~G~~~a 122 (329)
T 3ckj_A 46 AGRTISVVLPALDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEI-RAVAAGARVVSREQALPEVPIRPGKGEA 122 (329)
T ss_dssp TTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHH-HHHHTTCEEEEHHHHCTTSCCCCSHHHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHH-HHHHhhhhhccceeeeccCCCCCCHHHH
Confidence 468999999999999 99999999999999653 27999999999998543 4544422110012223 27889999999
Q ss_pred HHHHHhhccCCEEEEecCCcc-cCcChHHHHHHHHHcCC-cEEEeeeEeeecC-CeeEEecccccceeeeeccceeeEee
Q psy10463 275 RLLGARQAEGEILVFLDAHCE-CTLGWLENLVARVAEDR-TRVVCPVIDIISD-VTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~-~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
+|.|++.|+|+||+|+|+|+. +.|+||+.+++.+.+++ ..++++....... ...... .....++.....
T Consensus 123 ~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~------ 194 (329)
T 3ckj_A 123 LWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGG--AGATGGGRVTEL------ 194 (329)
T ss_dssp HHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC-----------------CHHHHH------
T ss_pred HHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCccccc--ccccCCCceehh------
Confidence 999999999999999999999 89999999999976654 4566554432211 000000 000000000000
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHH-cCCe-EEEecceEEEE
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQ-CGGS-IEIAPCSHVAH 426 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~-~G~~-i~~~p~s~v~H 426 (605)
........... .........|++++++|++|+++| |++++ +||+||++|+.+ .|++ +..+|.....|
T Consensus 195 ~~~~~~~~~~~---~~~~~~~~~~g~~~~rr~~l~~i~-f~~~~----~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 195 VARPLLAALRP---ELGCILQPLGGEYAATRELLTSVP-FAPGY----GVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp THHHHHHHHCG---GGGGCSCTTCSCEEEEHHHHTTSC-BCCGG----GHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred hHHHHHHHhhh---hhccccCCCccceeeeHHHHHhCC-CCCCC----cccHHHHHHHHHhcCCccEeeecceEEec
Confidence 00000000000 001122345678899999999997 88765 499999999987 6664 77777654444
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-24 Score=239.09 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=129.6
Q ss_pred hhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhc-CCcccccccccccCCCcCCCCCccc-ccccccccc
Q psy10463 446 GNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQL-KCHSFKWYLTHVWPHHFLPMDDKFF-GRIRHVQTH 523 (605)
Q Consensus 446 rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l-~ck~f~wyl~~v~p~~~~p~~~~~~-G~ir~~~~~ 523 (605)
+|..|.+++|||+|+.++|.+ | ....++|+++.|++||++| +||+|+||+++++|+...|. .++ |+|+|.+++
T Consensus 423 ~N~~R~aeVwmD~~k~~~~~~-P--~~~~~~gdvs~~~~Lr~~l~ncksF~wy~~~~~P~~~~~~--~~~~g~i~n~~sg 497 (614)
T 3a21_A 423 TSSARTATLQVNGQTATTVSF-P--PTGASAGTVSVEVSLSKGSANTLALSGGPATEGITVRPLP--GTNGALVTGKQSG 497 (614)
T ss_dssp SSSCEEEEEEETTSCCEEEEE-C--CCCSSCEEEEEEEEECSEEEEEEEEESSSCEEEEEEEECG--GGCBBCCEETTTC
T ss_pred CCCCceEEEEECCceeEEEec-C--CCCCCccceeEEEecccCCcceeeecccccccCceeeccC--CCceEEEEECCCC
Confidence 688899999999999999874 6 3467899999999999996 99999999999999986552 345 899999999
Q ss_pred ccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 524 KCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 524 ~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
+|||+.+... .+|++|++|+| |+ +.+|+|.++ ..|+|+..+++|||+.+..+.+|++|++++|++..+|+|.+.
T Consensus 498 ~CLDv~~~~~---~~g~~v~l~~C-~g-~~nQ~w~~~-~~g~ir~~~~~CLdv~~~~~~~G~~V~l~~C~g~~nQ~W~~~ 571 (614)
T 3a21_A 498 RCADIYNNTI---TNGTQAELWDC-NG-GPNQSWTYT-SRKELVLYGNKCLDAYNLGTTNGTKVVIWDCNGQANQKWNIN 571 (614)
T ss_dssp CEEECGGGCC---CTTCBCEEECC-CC-CGGGCBEEC-TTSCEEETTTEEEEEGGGCCSTTCBEEEEECCCCGGGCEEEC
T ss_pred cEEEeCCCCC---CCCCEEEEECC-CC-CCCceEEEE-CCceEEECCCcEEECCCCcCCCCceEEEeCCCCCCccEEEEc
Confidence 9999987655 56899999999 66 789999999 889999876799999887777899999999999779999986
Q ss_pred C
Q psy10463 604 K 604 (605)
Q Consensus 604 ~ 604 (605)
.
T Consensus 572 ~ 572 (614)
T 3a21_A 572 S 572 (614)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-22 Score=200.73 Aligned_cols=159 Identities=21% Similarity=0.258 Sum_probs=117.6
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHH---hcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVI---SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~---~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
.|+||||||+||++ +.|.++|.|++ +|++.. +|||||||+++. ..+.+.
T Consensus 64 ~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~-------------------------~f~~a~ 115 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDT-------------------------IFNRAK 115 (287)
T ss_dssp SCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSS-------------------------CCCHHH
T ss_pred CCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCC-------------------------ccchhh
Confidence 68999999999999 99999999999 677665 899999994321 136789
Q ss_pred HHHHHH----hhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 274 ARLLGA----RQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 274 arN~G~----~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
++|.|+ +.|+||||+|+|+|+++.++++... .. ..|.. + . .+ .+ . +
T Consensus 116 a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~~-----~~----~~p~~-------~------~--~~-~~-~--~-- 165 (287)
T 2fy7_A 116 LLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYR-----CF----SQPRH-------I------S--VA-MD-K--F-- 165 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCS-----CC----SSCEE-------C------C--CE-EG-G--G--
T ss_pred hhhhHHHHHHHhCCCCEEEEECCCcccCCCcceEe-----cC----CCCce-------E------E--Ee-ec-c--c--
Confidence 999999 8999999999999999999972100 00 00000 0 0 00 00 0 0
Q ss_pred eecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEE-----EecceEE
Q psy10463 350 YTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIE-----IAPCSHV 424 (605)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~-----~~p~s~v 424 (605)
....++ ..+.|++++++|+.|.++|||||.+..||+||.||++|+++.|+++. +.+.+.+
T Consensus 166 -------------~~~~~~--~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i 230 (287)
T 2fy7_A 166 -------------GFSLPY--VQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHI 230 (287)
T ss_dssp -------------TTSCSS--TTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEEC
T ss_pred -------------ccCCCc--CceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEE
Confidence 000111 35678999999999999999999999999999999999999999998 4455556
Q ss_pred EEEc
Q psy10463 425 AHLF 428 (605)
Q Consensus 425 ~H~~ 428 (605)
.|..
T Consensus 231 ~H~~ 234 (287)
T 2fy7_A 231 RHSR 234 (287)
T ss_dssp C---
T ss_pred ecCC
Confidence 6655
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=209.83 Aligned_cols=68 Identities=44% Similarity=0.808 Sum_probs=62.4
Q ss_pred EEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCcccccccccc
Q psy10463 126 LLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNE 194 (605)
Q Consensus 126 ivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~ 194 (605)
|||||||+|+|+.++++++++.. ++|+++++++|.|++.|+|.|++.|+|+|++|||+|+++.+.|++
T Consensus 148 IVVDDgS~D~tl~~~l~~~~~~~-~~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~ 215 (570)
T 2d7i_A 148 VLVDDFSDREHLKKPLEDYMALF-PSVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLP 215 (570)
T ss_dssp EEEECSCCCGGGTHHHHHHHTTS-TTEEEEECSSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSH
T ss_pred EEEECCCCcHHHHHHHHHHHHhC-CeEEEEECCCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHH
Confidence 79999999999778888888776 579999999999999999999999999999999999999888763
|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.1e-21 Score=199.88 Aligned_cols=210 Identities=15% Similarity=0.050 Sum_probs=136.7
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHh---cCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC-CCCEEEEeCCCCCCh
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVIS---RSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGL 271 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~---q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~-~~~v~~i~~~~n~G~ 271 (605)
..|+||||||+||++ +.|.++|.|+.+ +++.. +|||||||||+|++.+ +++++..+. ...+++++.+.|.|+
T Consensus 92 ~~p~vSVVIP~yNe~-~~l~~~l~sl~~~l~~~~~~--~EIIVVDDgStD~T~~-i~~~~~~~v~~~~~~~i~~~~n~G~ 167 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVA-DTVGGIIDEIHALNERAPLI--DQILVVDADSEDGTAG-VAASHGAEVYSENELMSGYGDAHGK 167 (387)
T ss_dssp HTCCEEEEEEESSCT-TTHHHHHHHHHHHHHHSCCC--SEEEEEECSCSSSHHH-HHHHTTCEEEEGGGTTGGGCSCCSH
T ss_pred CCCeEEEEEEcCCCH-HHHHHHHHHHHHHHhcCCCC--eEEEEEcCcCCccHHH-HHHHhCchhcccceeEecCCccCCH
Confidence 368999999999999 999999999976 34334 7999999999998543 455442210 001223356689999
Q ss_pred HHHHHHHHhhccCCEEEEecCCcc-cCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 272 IKARLLGARQAEGEILVFLDAHCE-CTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 272 ~~arN~G~~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
+.|+|.|++.|+|+||+|||+|+. +.|+||+.+++.+.+++ ..++++............. ...++..
T Consensus 168 g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~----~~~~g~v------- 236 (387)
T 3f1y_A 168 GDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIE----EDGGGRV------- 236 (387)
T ss_dssp HHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------C----CBCCSHH-------
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccc----cccCCch-------
Confidence 999999999999999999999999 89999999999998763 4555543221111000000 0000000
Q ss_pred eecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHH-HcCCe-EEEecceEEEEE
Q psy10463 350 YTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVW-QCGGS-IEIAPCSHVAHL 427 (605)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~-~~G~~-i~~~p~s~v~H~ 427 (605)
.................. .....+|.++++|++++++ +|++++ +.|.++.+++. +.|++ |..+|-....|.
T Consensus 237 ~~~~~~~l~~~~~~~l~~--~~d~~sG~~a~rR~~l~~i-~f~~gy----g~e~ell~~~~~~~G~~~I~eVpi~~~~h~ 309 (387)
T 3f1y_A 237 TELTAKPLFNLFYPELAG--FVQPLAGEFVADRELFCSI-PFLTGY----AVETGIMIDVLKKVGLGAMAQVDLGERQNR 309 (387)
T ss_dssp HHHTHHHHHHHHCGGGTT--CSCTTCSCEEEEHHHHTTS-CEECST----THHHHHHHHHHHHHCGGGEEEEEEEECCCC
T ss_pred hhhhHHHHHHHHhHhhcc--ccccccccEEEEHHHHHhC-CCCCCc----chHHHHHHHHHHhcCCCeEEEEecceeecC
Confidence 000000000000000001 1233567899999999999 676443 57899999985 56987 999987765443
|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-18 Score=165.75 Aligned_cols=99 Identities=26% Similarity=0.360 Sum_probs=88.3
Q ss_pred CCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHH
Q psy10463 88 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 167 (605)
Q Consensus 88 ~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~ 167 (605)
.+|++|||||+||++ ++|.+||+|+++|++++ +|||||||||+|+| .++++++.++.+ ++++++ .+|.|++.|+
T Consensus 3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t-~~~~~~~~~~~~-~i~~i~-~~n~G~~~a~ 76 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNC-PKICDDYAAQYP-NIKVIH-KKNAGLGMAC 76 (240)
T ss_dssp CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSH-HHHHHHHHHHCS-SEEEEE-CCCCCHHHHH
T ss_pred CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCH-HHHHHHHHhhCC-CEEEEE-CCCCChHHHH
Confidence 478999999999999 99999999999999987 89999999999998 456777776654 699987 5699999999
Q ss_pred HHHhhhccCceEEEecCcccccccc
Q psy10463 168 LLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 168 n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|.|++.|+|+|++|+|+|+.+.+.|
T Consensus 77 N~g~~~a~g~~i~~lD~Dd~~~~~~ 101 (240)
T 3bcv_A 77 NSGLDVATGEYVAFCDSDDYVDSDM 101 (240)
T ss_dssp HHHHHHCCSSEEEECCTTCCCCTTH
T ss_pred HHHHHHcCCCEEEEECCCCcCCHHH
Confidence 9999999999999999999887544
|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.6e-18 Score=167.99 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=86.6
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecC--------CCc
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP--------GRV 161 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~--------~~~ 161 (605)
|+||||||+||++ ++|.+||+|+++|++++ +|||||||||+|+|. ++++++.+ .++++++..+ .|.
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~-~~~~~~~~--~~~i~~i~~~~~~~~~~~~n~ 74 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETL-NVIRPFLN--DNRVRFYQSDISGVKERTEKT 74 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHH-HHHGGGGG--STTEEEEECCCCSHHHHHSSC
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHH-HHHHHHhh--cCCEEEEeccccccccccccc
Confidence 7899999999999 99999999999999986 899999999999984 34555544 5679999999 899
Q ss_pred chHHHHHHHhhhccCceEEEecCcccccccc
Q psy10463 162 GLIKARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|.+.|+|.|++.|+|+|++|+|+|+.+.+.|
T Consensus 75 G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~ 105 (255)
T 1qg8_A 75 RYAALINQAIEMAEGEYITYATDDNIYMPDR 105 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTTH
T ss_pred CHHHHHHHHHHHcCCCEEEEeCCCCccChHH
Confidence 9999999999999999999999999876543
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-16 Score=164.94 Aligned_cols=104 Identities=18% Similarity=0.177 Sum_probs=82.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEee-cCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR-SPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~-~~~~~G~~~ 165 (605)
...|++|||||+||++ ++|.+||+|+++|+++. .+|||||||||+|+|.+ +++++.......++++. ++.|.|++.
T Consensus 45 ~~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~-~~~~~~~~~~~~~~~~~~~~~n~G~~~ 121 (329)
T 3ckj_A 45 KAGRTISVVLPALDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEI-RAVAAGARVVSREQALPEVPIRPGKGE 121 (329)
T ss_dssp TTTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHH-HHHHTTCEEEEHHHHCTTSCCCCSHHH
T ss_pred ccCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHH-HHHHhhhhhccceeeeccCCCCCCHHH
Confidence 4468999999999999 99999999999999764 27999999999999843 34443211111223332 789999999
Q ss_pred HHHHHhhhccCceEEEecCccc-cccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCE-CTLVFN 193 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~-~~~~~~ 193 (605)
|+|.|++.|+|+|++|+|+|+. ..+.|+
T Consensus 122 a~n~g~~~a~gd~i~~lD~D~~~~~p~~l 150 (329)
T 3ckj_A 122 ALWRSLAASRGDIVVFVDSDLINPHPMFV 150 (329)
T ss_dssp HHHHHHHHCCCSEEEECCTTEESCCTTHH
T ss_pred HHHHHHHhCCCCEEEEECCCCCCcChHHH
Confidence 9999999999999999999998 665443
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4e-17 Score=186.45 Aligned_cols=103 Identities=20% Similarity=0.265 Sum_probs=0.0
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 168 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n 168 (605)
||+||||||+||++ ++|.+||+|+++|++++ +|||||||||+|+|. ++++++.+..+++|+++++++|.|.+.|+|
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~-~il~~~~~~~~~~i~~i~~~~n~G~~~arN 76 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQSK-KLMDEAIKDYDKNIRFIDLDENSGHAHARN 76 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHH-HHHHHHHHhCCCCEEEEECCCCCCHHHHHH
Confidence 68999999999999 99999999999999987 799999999999984 567787777677899999999999999999
Q ss_pred HHhhhccCceEEEecCccccccccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTLVFNEE 195 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~~~~~~ 195 (605)
.|++.|+|+|++|+|+|+.+.+.|++.
T Consensus 77 ~gi~~A~gdyI~flD~Dd~~~p~~l~~ 103 (729)
T 3l7i_A 77 IALEEVETPYFMFLDADDELASYAITF 103 (729)
T ss_dssp ---------------------------
T ss_pred HHHHhccCCEEEEECCCCCCChhHHHH
Confidence 999999999999999999998877653
|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6e-16 Score=162.34 Aligned_cols=116 Identities=17% Similarity=0.124 Sum_probs=88.0
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHh---cCCccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcchH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVIS---RSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLI 164 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~---~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~~ 164 (605)
.|++|||||+||++ ++|.+||+|+.+ |.+.+ +|||||||||+|+|.+ +++++..+. ...++++..+.|.|++
T Consensus 93 ~p~vSVVIP~yNe~-~~l~~~l~sl~~~l~~~~~~--~EIIVVDDgStD~T~~-i~~~~~~~v~~~~~~~i~~~~n~G~g 168 (387)
T 3f1y_A 93 GLTVSAVLPSRNVA-DTVGGIIDEIHALNERAPLI--DQILVVDADSEDGTAG-VAASHGAEVYSENELMSGYGDAHGKG 168 (387)
T ss_dssp TCCEEEEEEESSCT-TTHHHHHHHHHHHHHHSCCC--SEEEEEECSCSSSHHH-HHHHTTCEEEEGGGTTGGGCSCCSHH
T ss_pred CCeEEEEEEcCCCH-HHHHHHHHHHHHHHhcCCCC--eEEEEEcCcCCccHHH-HHHHhCchhcccceeEecCCccCCHH
Confidence 58999999999999 999999999986 34334 7999999999999854 344432211 1123355678899999
Q ss_pred HHHHHHhhhccCceEEEecCccc-ccccccccc------CCcceEEEEeec
Q psy10463 165 KARLLGARQAEGEILVFLDAHCE-CTLVFNEEF------LPKSSIVIVFHN 208 (605)
Q Consensus 165 ~a~n~g~~~a~g~~i~~lD~d~~-~~~~~~~~~------~p~vSVIIp~~n 208 (605)
.|+|.|++.|+|+|++|+|+|+. +.+.|++.. .|.+.+|+..|.
T Consensus 169 ~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~ 219 (387)
T 3f1y_A 169 DAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYR 219 (387)
T ss_dssp HHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeec
Confidence 99999999999999999999998 777665422 244555555543
|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.7e-13 Score=143.49 Aligned_cols=194 Identities=15% Similarity=0.102 Sum_probs=117.5
Q ss_pred eEEEEeechhhHHHHHHHHHHHh-cCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC----CCCEEEEeCC--C--CCCh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVIS-RSPRSMLKEILLVDDASTREFLKSSLDEYVAKL----SVPTRVIRSP--G--RVGL 271 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~-q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~----~~~v~~i~~~--~--n~G~ 271 (605)
|+|||.+|++ .+..++.++.. +..+. +|||||||||+|+|.+ +++++.++. +.++..+... . |.|.
T Consensus 2 slVIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGStD~T~e-ia~~la~~~~~~~g~~vi~~~~~r~~~~n~Gk 76 (397)
T 2bo4_A 2 SLVVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYERDQTYE-AVERAAPEISRATGTPVSVRLQERLGTLRPGK 76 (397)
T ss_dssp CEEEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSCCHHHH-HHHHHHHHHHHHHSCCEEEEECCCCSSSSSSH
T ss_pred cEEEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCCccHHH-HHHHhhhhcccccCCeEEEEecccCCCCCCCH
Confidence 4555555544 36666766642 22333 6999999999999544 666443322 2244433323 3 7999
Q ss_pred HHHHHHHH----hhccCCEEEEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccce
Q psy10463 272 IKARLLGA----RQAEGEILVFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELH 346 (605)
Q Consensus 272 ~~arN~G~----~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~ 346 (605)
+.|.+.|+ +.|+||+|+|||+|.. .+|+|+..|++.+.++.+.+++ ... .+.. .+.+.+.+.
T Consensus 77 G~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g-~~~-------r~~~-----~~~~~~~~~ 143 (397)
T 2bo4_A 77 GDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRH-YFP-------RAST-----DAMITWMIT 143 (397)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEE-ECC-------CCTT-----SCHHHHHTH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEE-Eec-------cccC-----CcHHHHHHH
Confidence 99999999 8999999999999996 8999999999999776433332 210 0000 000000000
Q ss_pred eeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCC--cccccccchhhHHHHHHHHcCCeEEEecc
Q psy10463 347 FRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYD--EEMQVWGGENLEMSFRVWQCGGSIEIAPC 421 (605)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfD--e~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 421 (605)
...... ..............+|.++++|++++.+.... .....| +.|.++..++.+.|+++..+|-
T Consensus 144 -------~~ll~~-~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~f-g~eiel~~~a~~~G~rI~EVpi 211 (397)
T 2bo4_A 144 -------RTGFAL-LWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDW-GIDTLYTFVTVQQGVSIYECYI 211 (397)
T ss_dssp -------HHHHHH-HCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCST-THHHHHHHHHHHTTCCEEEEEC
T ss_pred -------HHHHHH-HHHHhhccccccCCcccEEEeHHHHHHHhhhcccCcCCCc-chHHHHHHHHHHcCCEEEEEEC
Confidence 000000 00000001122224677799999999984321 122333 5699999999999999988874
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-14 Score=160.70 Aligned_cols=103 Identities=10% Similarity=0.078 Sum_probs=84.8
Q ss_pred CCCcEEEEEEeecCchHHHHHHHHHHHhcCCcc-CcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 88 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRS-MLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 88 ~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~-~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
.-|+||||||+||++ +.|.+||+|+++|++.. ..+|||||||||+|++....+.+.++...++|+++.++ |.|+++|
T Consensus 178 ~~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~-N~G~a~a 255 (657)
T 4fix_A 178 GTANIAVGIPTFNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP-NLGGSGG 255 (657)
T ss_dssp SCCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC-CCHHHHH
T ss_pred CCCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC-CCCHHHH
Confidence 358999999999999 99999999999998621 22699999999998643333445555555689999998 9999999
Q ss_pred HHHHhhhcc----CceEEEecCcccccccc
Q psy10463 167 RLLGARQAE----GEILVFLDAHCECTLVF 192 (605)
Q Consensus 167 ~n~g~~~a~----g~~i~~lD~d~~~~~~~ 192 (605)
+|.|++.|. ++|++|+|+|+.+.++|
T Consensus 256 ~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~ 285 (657)
T 4fix_A 256 YSRVMYEALKNTDCQQILFMDDDIRLEPDS 285 (657)
T ss_dssp HHHHHHHHHHHCCCSEEEEECSSEEECTHH
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCccChhH
Confidence 999999995 47999999999887544
|
| >1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=6.3e-14 Score=124.03 Aligned_cols=85 Identities=22% Similarity=0.411 Sum_probs=72.7
Q ss_pred ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEe
Q psy10463 512 KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 512 ~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.++|+|++..+++|||+.+... .+|++|.+|+| ++ +.+|+|.++ ..|.|+..+++|||+. .+.+|+.|.+++
T Consensus 4 ~~~g~i~n~~sg~cld~~~~~~---~~g~~v~~~~c-~~-~~~Q~w~~~-~~g~i~~~s~~CLd~~--~~~~g~~v~~~~ 75 (130)
T 1knl_A 4 ADGGQIKGVGSGRCLDVPDAST---SDGTQLQLWDC-HS-GTNQQWAAT-DAGELRVYGDKCLDAA--GTSNGSKVQIYS 75 (130)
T ss_dssp -CCBCCEETTTCCEEECGGGCC---CTTCBCEEECC-CS-CGGGCBEEC-TTSCEEETTTEEEEES--CSSTTCBEEEEE
T ss_pred CceeEEEECCCCCEEECCCCCC---CCCCEEEEEec-CC-CcccEEEEe-CCCcEEECCCcEEeCC--CCCCCCEEEEEe
Confidence 5789999999999999987654 56899999999 66 689999999 7888998778999993 345688999999
Q ss_pred CCCCCCcceEeCC
Q psy10463 592 CSGFNRQRWTYDK 604 (605)
Q Consensus 592 C~~~~~Q~W~~~~ 604 (605)
|++..+|+|.+..
T Consensus 76 c~~~~~Q~W~~~~ 88 (130)
T 1knl_A 76 CWGGDNQKWRLNS 88 (130)
T ss_dssp CCCCGGGCEEECT
T ss_pred cCCCCcceEEECC
Confidence 9997799999864
|
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.7e-13 Score=155.74 Aligned_cols=105 Identities=20% Similarity=0.177 Sum_probs=86.9
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhH--------------HHHHHHHHHhcCCCe
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL--------------KSSLDEYVAKLSVPT 152 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~--------------~~~~~~~~~~~~~~v 152 (605)
+..|++|||||+|||+...|.+||+|+++|+|++..+|||||||||+|+|. ...++++.+.. ++
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~--~v 214 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL--GV 214 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--TC
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc--Cc
Confidence 568999999999999944559999999999998866799999999999994 23344444444 46
Q ss_pred EEeecCCC-cchHHHHHHHhhhccCceEEEecCccccccccc
Q psy10463 153 RVIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 153 ~~~~~~~~-~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
+++..+++ .|++.|+|.|++.|+|||++++|+|+.+.++|.
T Consensus 215 ~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L 256 (802)
T 4hg6_A 215 VYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFL 256 (802)
T ss_dssp EEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHH
T ss_pred EEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHH
Confidence 77766655 899999999999999999999999998876554
|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=9e-13 Score=131.54 Aligned_cols=94 Identities=22% Similarity=0.277 Sum_probs=79.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhH--HHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL--KSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~--~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
..++|||||+||++ . .+|++|++|++.+ .|||||||||+|.+. .+++++|.+....++++++ .+|.|++.|
T Consensus 52 ~~klSIVVPvYNEe-~---~lLesVl~qi~~d--~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viH-Qkn~gls~A 124 (391)
T 2wvl_A 52 LEQTAIVVPTRNER-L---KLLEGVLSGIPHE--ALILVASNSSPDRFQMERDLLEEFAHLTERPALIFH-QKDPALAEA 124 (391)
T ss_dssp HTTEEEEEEESSCC-H---HHHHHHHHTSCTT--SEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEE-TTCHHHHHH
T ss_pred HhceEEEEeccCcH-H---HHHHHHHhcCCCC--ceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEe-ccChHHHHH
Confidence 47899999999999 4 3699999999988 799999999999984 4677888876677899995 667888888
Q ss_pred HH-H----------------------Hhhhc---cCceEEEecCccccc
Q psy10463 167 RL-L----------------------GARQA---EGEILVFLDAHCECT 189 (605)
Q Consensus 167 ~n-~----------------------g~~~a---~g~~i~~lD~d~~~~ 189 (605)
+| . |+..| .|+|+.|+|+|+.++
T Consensus 125 r~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~ 173 (391)
T 2wvl_A 125 LRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFP 173 (391)
T ss_dssp HHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCH
T ss_pred HHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCc
Confidence 86 3 55666 799999999999775
|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.4e-12 Score=128.53 Aligned_cols=105 Identities=22% Similarity=0.234 Sum_probs=85.1
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHH--HHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL--KSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~--~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
..+++|||||+||+. . ++|+++++|++.+ +|||+|||||+|.+. .+++++|.+....++.+|+ .+|.|++.
T Consensus 51 i~~klSIVVPvYNEe-~---~lLesVl~qi~~d--~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viH-Qkn~gls~ 123 (391)
T 2wvl_A 51 VLEQTAIVVPTRNER-L---KLLEGVLSGIPHE--ALILVASNSSPDRFQMERDLLEEFAHLTERPALIFH-QKDPALAE 123 (391)
T ss_dssp HHTTEEEEEEESSCC-H---HHHHHHHHTSCTT--SEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEE-TTCHHHHH
T ss_pred HHhceEEEEeccCcH-H---HHHHHHHhcCCCC--ceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEe-ccChHHHH
Confidence 367899999999999 4 4699999999987 799999999999863 3578888875444899996 66799999
Q ss_pred HHH-H----------------------HHhhc---cCCEEEEecCCcccCcChHHHHHHH
Q psy10463 274 ARL-L----------------------GARQA---EGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 274 arN-~----------------------G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
|+| . |+..| .|+||.|+|+|+.++.+..+.+...
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~y 183 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAY 183 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHH
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHH
Confidence 997 3 55666 7999999999999976666555443
|
| >2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=6.8e-13 Score=117.08 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=67.9
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec--CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT--DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~--~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.|+|++..+++|||+. |+.|.+|+| ++ +.+|+|.+. ..|.+.. .+++|||+.+..+++|+.|++|+
T Consensus 49 ~g~i~~~~sg~cLD~~---------G~~v~~~~c-~g-~~~Qqw~~~-~~g~~~~~~~sg~cLDv~g~st~~G~~v~~w~ 116 (130)
T 2dry_A 49 QGVIRSKLNDFAIDAS---------HEQIETQPF-DP-NNPKRAWIV-SGNTIAQLSDRDNVLGVIKSDKGASAHICAWK 116 (130)
T ss_dssp TCCEEETTTCCEEECS---------SSSCEEECC-CT-TCGGGCEEE-ETTEEEETTEEEEEEEEECCSSSSCCEEEEEE
T ss_pred ceeEEEccCCeeEEec---------CCceEEEec-CC-CcceeEEEe-CCCcEEEecccCceEEccCCCCCCCCEEEEEC
Confidence 4789998899999974 467999999 65 678999998 6666653 46799999998889999999999
Q ss_pred CCCCCCcceEeCCC
Q psy10463 592 CSGFNRQRWTYDKE 605 (605)
Q Consensus 592 C~~~~~Q~W~~~~~ 605 (605)
|++..+|+|.|+.+
T Consensus 117 ~~g~~nQ~W~~ese 130 (130)
T 2dry_A 117 QHGGPNQKFIIESE 130 (130)
T ss_dssp CCCSGGGCEEEEEC
T ss_pred CCCCccceEEEEeC
Confidence 99988999999753
|
| >2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-12 Score=114.20 Aligned_cols=80 Identities=10% Similarity=0.040 Sum_probs=67.5
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCC--CcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEE
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLP--VLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRIL 590 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~--~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~ 590 (605)
+-.|++..+++|||+.+..+ .+|++|.+|+| ++. ..||+|.++ ..|+|+. .+++|||+. |+.|+++
T Consensus 3 ~y~i~n~~SGk~LDV~g~s~---~~Ga~v~~w~~-~~~~~~~nQ~W~~~-~~g~i~~~~sg~cLD~~------G~~v~~~ 71 (130)
T 2dry_A 3 FFYIKSELNGKVLDIGGQNP---APGSKIITWDQ-KKGPTAVNQLWYTD-QQGVIRSKLNDFAIDAS------HEQIETQ 71 (130)
T ss_dssp CEEEEETTTSCEEEEGGGCC---STTCBEEEECC-CCSGGGGGGCEEEC-TTCCEEETTTCCEEECS------SSSCEEE
T ss_pred EEEEEECCCCCEEEECCCCc---CCCceEEEEEe-cCCCCchheEEEEe-cceeEEEccCCeeEEec------CCceEEE
Confidence 45799999999999998776 78999999999 543 258999999 8889985 467999986 4589999
Q ss_pred eCCCCCCcceEeCC
Q psy10463 591 ACSGFNRQRWTYDK 604 (605)
Q Consensus 591 ~C~~~~~Q~W~~~~ 604 (605)
+|++..+|+|.+..
T Consensus 72 ~c~g~~~Qqw~~~~ 85 (130)
T 2dry_A 72 PFDPNNPKRAWIVS 85 (130)
T ss_dssp CCCTTCGGGCEEEE
T ss_pred ecCCCcceeEEEeC
Confidence 99999999998753
|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-11 Score=124.42 Aligned_cols=77 Identities=18% Similarity=0.116 Sum_probs=66.1
Q ss_pred CCCcEEEEEEeecCchHHHHHHHHHHH---hcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchH
Q psy10463 88 FLPKSSIVIVFHNEAWSALLRTVHSVI---SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI 164 (605)
Q Consensus 88 ~~p~~Siiip~yN~~~~~l~~~l~sv~---~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~ 164 (605)
..|++|||||+||++ +.|.+||+|++ +|++.+ +|||||||. +|.+ .+.+
T Consensus 63 ~~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~~--~EIiVVdds-~d~~------------------------f~~a 114 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQLD--YGIYVINQA-GDTI------------------------FNRA 114 (287)
T ss_dssp CSCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCE--EEEEEEEEC-SSSC------------------------CCHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcCC--ceEEEEEeC-CCCc------------------------cchh
Confidence 368999999999999 99999999999 688776 899999994 3421 3678
Q ss_pred HHHHHHh----hhccCceEEEecCcccccccc
Q psy10463 165 KARLLGA----RQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 165 ~a~n~g~----~~a~g~~i~~lD~d~~~~~~~ 192 (605)
.++|.|+ +.|+|+|++|+|+|+.+.+++
T Consensus 115 ~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 115 KLLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred hhhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 8999999 899999999999999887654
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=99.23 E-value=7.8e-12 Score=115.35 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=71.6
Q ss_pred ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCc----eee-cCCCeeeecCCCCCCCCCc
Q psy10463 512 KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTD----LIA-TDESVCLDVPEYENDISPR 586 (605)
Q Consensus 512 ~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g----~i~-~~~~~CLd~~~~~~~~g~~ 586 (605)
..+.+|++..+++|||+.+... .+|++|.+|+| ++ +.+|+|.++ ..+ .|+ ..+++|||+.+..+.+|+.
T Consensus 26 ~g~y~i~n~~sg~cLdv~~~~~---~~g~~v~~~~c-~~-~~~Q~W~~~-~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~ 99 (165)
T 3pg0_A 26 DGYYKLVARHSGKALDVENAST---SDGANVIQYSY-SG-GDNQQWRLV-DLGDGYYKLVARHSGKALDVENASTSDGAN 99 (165)
T ss_dssp CCEEEEEETTTCCEEEEGGGCC---STTCBEEEECC-CC-CGGGCEEEE-EEETTEEEEEETTTCCEEEEGGGCCSTTCB
T ss_pred CCEEEEEECCCCCEEEeCCCCC---CCCCEEEEECC-CC-CccceEEEE-ECCCCEEEEEECCCCCEEEeCCCCCCCCCE
Confidence 3567899999999999987655 67899999999 65 579999997 433 244 3568999998877778999
Q ss_pred eEEEeCCCCCCcceEeCC
Q psy10463 587 VRILACSGFNRQRWTYDK 604 (605)
Q Consensus 587 v~l~~C~~~~~Q~W~~~~ 604 (605)
|.+++|++..+|+|.+..
T Consensus 100 v~~~~c~~~~~Q~W~~~~ 117 (165)
T 3pg0_A 100 VIQYSYSGGDNQQWRLVD 117 (165)
T ss_dssp EEEECCCCCGGGCEEEEE
T ss_pred EEEEcCCCCCccEEEEEE
Confidence 999999998899999853
|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.1e-11 Score=119.19 Aligned_cols=79 Identities=13% Similarity=0.008 Sum_probs=65.2
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCC-ccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~-~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~ 165 (605)
...|.+||| |+||++ +.|.+||+|+..... +.. +|||||||+|+|. .|++.
T Consensus 13 ~~~~~iSII-~~yN~~-~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~-------------------------~g~a~ 64 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQ-AKYDRLLESFERFGFTPDK-AEFLAADNREGNQ-------------------------FHGFS 64 (249)
T ss_dssp CCCCSEEEE-EEESCH-HHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS-------------------------CCTTT
T ss_pred CCcceEEEE-EeeCCH-HHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc-------------------------ccHHH
Confidence 345789975 679998 999999998765322 222 7999999999872 47789
Q ss_pred HHHHHhhhccCceEEEecCccccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
|+|.|++.|+|+|++|||+|+.+.+.|+
T Consensus 65 a~N~Gi~~A~g~yl~fln~D~~~~~~~l 92 (249)
T 2nxv_A 65 WHKQMLPRCKGRYVIFCHEDVELVDRGY 92 (249)
T ss_dssp HHHHHGGGCCSSEEEEEETTEECSSCCH
T ss_pred HHHHHHHhcCCCEEEEECCCcccCccHH
Confidence 9999999999999999999999887764
|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=3.6e-10 Score=115.61 Aligned_cols=187 Identities=14% Similarity=0.139 Sum_probs=119.5
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEe---------CCC
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR---------SPG 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~---------~~~ 267 (605)
++.++|||++||++ + |.++|+|++++.+....++|||.|||+..+ +.++++.+. .+|+.+. .++
T Consensus 1 ~~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~-~~~vi~~~~----~~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 1 LAVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEE-TAQVIASYG----SAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHH-HHHHHHTTG----GGSEEEECSCCCCCCCCTT
T ss_pred CCcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHH-HHHHHHHcC----CceEEEEcCCccccccchh
Confidence 36789999999999 8 999999999998665557999999999876 444555542 2355442 345
Q ss_pred CCChH----------HHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHH---HcCCcE-EEeeeEeeecCCeeEEecc
Q psy10463 268 RVGLI----------KARLLGARQAEGEILVFLDAHCECTLGWLENLVARV---AEDRTR-VVCPVIDIISDVTFAYVRS 333 (605)
Q Consensus 268 n~G~~----------~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~---~~~~~~-vv~p~i~~i~~~~~~~~~~ 333 (605)
|.|+. .|+|..+..+++++++|||+|+++.|++++-+.+.+ +.++.. .+++- +..
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~----n~~------- 142 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW----NDN------- 142 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC----CTT-------
T ss_pred hcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc----cCc-------
Confidence 56653 567777777799999999999999999996665554 555443 22110 000
Q ss_pred cccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHH--HH
Q psy10463 334 FELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRV--WQ 411 (605)
Q Consensus 334 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl--~~ 411 (605)
|... . .........+++..+.|-.+|+.|+.|+++ ++.. -...+|.++|. ..
T Consensus 143 -----g~~~--------------~-~~~~~~~~lyrs~~f~~wGWa~wr~~W~e~---~~~w---p~~~Wd~w~r~~~~~ 196 (343)
T 1fo8_A 143 -----GKEQ--------------M-VDSSKPELLYRTDFFPGLGWLLLAELWAEL---EPKW---PKAFWDDWMRRPEQR 196 (343)
T ss_dssp -----CBGG--------------G-SCTTCTTCEEEESSCCCSSEEEEHHHHHHH---GGGC---CSSCHHHHHTSHHHH
T ss_pred -----cccc--------------c-ccccCcceEEeecCCCchhhhhcHHHHHHH---hhhc---chhHHHHHHHHHHHh
Confidence 0000 0 000111222345555566689999999974 4543 34567777763 33
Q ss_pred cCCeEEEecc-eEEEEEc
Q psy10463 412 CGGSIEIAPC-SHVAHLF 428 (605)
Q Consensus 412 ~G~~i~~~p~-s~v~H~~ 428 (605)
.| +..+.|+ +++.|+.
T Consensus 197 ~~-r~ci~P~vsrv~n~G 213 (343)
T 1fo8_A 197 KG-RACVRPEISRTMTFG 213 (343)
T ss_dssp TT-CEEEEESSBSEEECC
T ss_pred CC-CEEEEeccceeEecc
Confidence 44 4555555 4577754
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-11 Score=131.80 Aligned_cols=84 Identities=23% Similarity=0.438 Sum_probs=71.9
Q ss_pred cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeC
Q psy10463 513 FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 513 ~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
+.|+|++.++++|||+.+..+ .+|++|++|+| |+ +.||+|.++ ..|.|+..+++|||+. ++.+|+.|++++|
T Consensus 311 ~~~~i~n~~sg~CLDv~~~~~---~~g~~v~~~~C-~g-~~nQ~W~~~-~~g~i~~~sg~CLdv~--~~~~G~~v~~~~C 382 (436)
T 2d1z_A 311 GGGQIKGVGSGRCLDVPNAST---TDGTQVQLYDC-HS-ATNQQWTYT-DAGELRVYGDKCLDAA--GTGNGTKVQIYSC 382 (436)
T ss_dssp --CCEEETTTCCEEECGGGCC---CTTEECEEECC-CS-CGGGCCEEC-TTSCEEETTTEEEEES--SSSTTCBEEEEEC
T ss_pred CceEEEECCCCceEeccCCcC---CCCceEEEEec-CC-CCceEEEEe-cCceEEECCCeEEEEC--CCCCCceEEEEec
Confidence 468999999999999987665 56899999999 66 689999999 7888998778999998 3456899999999
Q ss_pred CCCCCcceEeCC
Q psy10463 593 SGFNRQRWTYDK 604 (605)
Q Consensus 593 ~~~~~Q~W~~~~ 604 (605)
++..+|+|.+..
T Consensus 383 ~g~~nQ~W~~~~ 394 (436)
T 2d1z_A 383 WGGDNQKWRLNS 394 (436)
T ss_dssp CCCGGGCEEECT
T ss_pred CCCCCceEEECC
Confidence 997799999864
|
| >1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-11 Score=107.72 Aligned_cols=80 Identities=20% Similarity=0.393 Sum_probs=65.8
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
|.|+ ..+++|||+.+ . .+|++|.+|+| ++ ..+|+|.++ ..|.|++ .+++|||+.+..+.+|+.|.+++|+
T Consensus 50 g~i~-~~s~~CLd~~~--~---~~g~~v~~~~c-~~-~~~Q~W~~~-~~g~i~~~~sg~cLdv~~~~~~~g~~v~~~~c~ 120 (130)
T 1knl_A 50 GELR-VYGDKCLDAAG--T---SNGSKVQIYSC-WG-GDNQKWRLN-SDGSVVGVQSGLCLDAVGNGTANGTLIQLYTCS 120 (130)
T ss_dssp SCEE-ETTTEEEEESC--S---STTCBEEEEEC-CC-CGGGCEEEC-TTSCEEETTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred CcEE-ECCCcEEeCCC--C---CCCCEEEEEec-CC-CCcceEEEC-CCCeEEECCCCceEECCCCCCCCCCEEEEEeCC
Confidence 6777 35789999932 2 45889999999 65 689999999 6788875 5789999987777778999999999
Q ss_pred CCCCcceEeC
Q psy10463 594 GFNRQRWTYD 603 (605)
Q Consensus 594 ~~~~Q~W~~~ 603 (605)
+..+|+|.+.
T Consensus 121 ~~~~Q~W~~~ 130 (130)
T 1knl_A 121 NGSNQRWTRT 130 (130)
T ss_dssp CCGGGCEECC
T ss_pred CCccceEEEC
Confidence 8669999873
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-11 Score=112.94 Aligned_cols=83 Identities=13% Similarity=0.087 Sum_probs=69.6
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCc----eeec-CCCeeeecCCCCCCCCCceEE
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTD----LIAT-DESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g----~i~~-~~~~CLd~~~~~~~~g~~v~l 589 (605)
-+|++..+++|||+.+... .+|++|.+|+| ++ +.+|+|.+. ..+ .|++ .+++|||+.+..+.+|+.|++
T Consensus 76 y~i~~~~sg~cLdv~~~~~---~~G~~v~~~~c-~~-~~~Q~W~~~-~~g~g~~~i~~~~sg~cLdv~~~~~~~G~~v~~ 149 (165)
T 3pg0_A 76 YKLVARHSGKALDVENAST---SDGANVIQYSY-SG-GDNQQWRLV-DLGDGYYKLVARHSGKALDVENASTSDGANVIQ 149 (165)
T ss_dssp EEEEETTTCCEEEEGGGCC---STTCBEEEECC-CC-CGGGCEEEE-ECSSSCEEEEETTTCCEEEEGGGCCSTTCBEEE
T ss_pred EEEEECCCCCEEEeCCCCC---CCCCEEEEEcC-CC-CCccEEEEE-ECCCCEEEEEECCCCcEEEcCCCCCCCCCEEEE
Confidence 3688888999999987655 57899999999 55 589999998 544 5654 578999999877788999999
Q ss_pred EeCCCCCCcceEeC
Q psy10463 590 LACSGFNRQRWTYD 603 (605)
Q Consensus 590 ~~C~~~~~Q~W~~~ 603 (605)
++|++..+|+|.+.
T Consensus 150 ~~c~g~~nQ~W~~~ 163 (165)
T 3pg0_A 150 YSYSGGDNQQWRLV 163 (165)
T ss_dssp ECCCCCGGGCEEEE
T ss_pred eCCCCCccceEEEE
Confidence 99998779999985
|
| >3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-11 Score=105.44 Aligned_cols=72 Identities=26% Similarity=0.436 Sum_probs=36.5
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
|+|++..+++|||+.+ +++|.+|+| ++ +.+|+|.++ ..|.|++ .+++|||+.+. ++|.+++|+
T Consensus 45 g~i~~~~sg~CLd~~~--------~~~v~~~~C-~g-~~~Q~W~~~-~~g~i~~~~sg~cLdv~~~-----~~v~~~~c~ 108 (118)
T 3a07_A 45 GTVRNAQTGRCLDSNY--------DGAVYTLPC-NG-GSYQKWLFY-SNGYIQNVETGRVLDSNYN-----GNVYTLPAN 108 (118)
T ss_dssp SCCEETTTCCEEEECT--------TCBEEEECC-CC-CGGGCEEEC-TTSCEEETTTCCEEEECTT-----CCEEEECCC
T ss_pred EEEEECCCCcEEecCC--------CCeEEEEcc-CC-CccceEEEe-CCCEEEECCCCcEEEcCCC-----CEEEEEcCC
Confidence 4555555555555532 124555556 33 455556555 4455543 34456655431 235555665
Q ss_pred CCCCcceEe
Q psy10463 594 GFNRQRWTY 602 (605)
Q Consensus 594 ~~~~Q~W~~ 602 (605)
+..+|+|.+
T Consensus 109 g~~~Q~W~~ 117 (118)
T 3a07_A 109 GGNYQKWYT 117 (118)
T ss_dssp CCGGGCEEE
T ss_pred CChhceEec
Confidence 544555554
|
| >3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=111.87 Aligned_cols=152 Identities=16% Similarity=0.212 Sum_probs=105.2
Q ss_pred CCcceEEEEeechhhHHHHHHH---HHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTV---HSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l---~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
.-+|.||||++|+. +.|...| ..++.+..- .+.|+||+... ...++.+.
T Consensus 50 ~~kvAIIIPyRdR~-~hL~~fl~~lhp~L~rQ~l--~y~I~VieQ~~-------------------------~~~FNRa~ 101 (287)
T 3lw6_A 50 VHKMALLVPFRDRF-EELLQFVPHMTAFLKRQGV--AHHIFVLNQVD-------------------------RFRFNRAS 101 (287)
T ss_dssp CCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTC--EEEEEEEEECS-------------------------SSCCCHHH
T ss_pred cceEEEEEEeCCHH-HHHHHHHHHHHHHHHHcCC--ceEEEEEecCC-------------------------CCccchhh
Confidence 35799999999999 7665555 445555433 37888887631 12377889
Q ss_pred HHHHHHhhcc--CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEee
Q psy10463 274 ARLLGARQAE--GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 274 arN~G~~~A~--gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
..|.|+..|. .|+++|-|.|..+..+.. ...||.. ....+...
T Consensus 102 LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n------------~Y~c~~~------------~~P~Hls~----------- 146 (287)
T 3lw6_A 102 LINVGFQFASDVYDYIAMHDVDLLPLNDNL------------LYEYPSS------------LGPLHIAG----------- 146 (287)
T ss_dssp HHHHHHHHSCTTCCEEEEECTTEEECCTTS------------CCCCCCT------------TCCEESSC-----------
T ss_pred eecccHHHHhccCCEEEEecccccccCCCc------------cccCCCC------------CCceEEee-----------
Confidence 9999999885 699999999988754321 1111100 00000000
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecc
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPC 421 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 421 (605)
+ ..... +......||+++++|+.|.++||||+.|.+||+||.||..|++..|+++...+.
T Consensus 147 -~-------~~~~~--~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~ 206 (287)
T 3lw6_A 147 -P-------KLHPK--YHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQN 206 (287)
T ss_dssp -T-------TTCSS--CCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSS
T ss_pred -c-------cccCC--CCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCC
Confidence 0 00011 112457899999999999999999999999999999999999999999876654
|
| >3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-11 Score=119.01 Aligned_cols=86 Identities=8% Similarity=0.086 Sum_probs=67.9
Q ss_pred cccccccccc-ccccccccCCCCCCCCCC-eEEeecCCCCCcceEEEEecC-Cc---eee-cCCCeeeecCCCCCCCCCc
Q psy10463 514 FGRIRHVQTH-KCVEKPLAKGSMNQASGP-ASLLPCTHLPVLTQMFVMKLP-TD---LIA-TDESVCLDVPEYENDISPR 586 (605)
Q Consensus 514 ~G~ir~~~~~-~CLD~~~~~~~~~~~g~~-v~l~~C~~~~~~nQ~w~~~~~-~g---~i~-~~~~~CLd~~~~~~~~g~~ 586 (605)
.-+|+++.++ +|||+.+.++ .+|++ |++|.| ...+.+|+|.++.. +| .|+ ..+++|||+.+.++++|++
T Consensus 8 ~Y~I~N~~SGnKcLDV~g~ST---anGt~~Vqqw~c-~nG~~nQqW~l~~~G~G~~Y~I~N~~SGKcLDV~g~sTadGa~ 83 (286)
T 3phz_A 8 IYYIASAYVANTRLALSEDSS---ANKSPDVIISSD-AVDPLNNLWLIEPVGEADTYTVRNAFAGSYMDLAGHAATDGTA 83 (286)
T ss_dssp EEEEEESSSTTEEEEECC-------CCCCBEEEEET-TCCCGGGCEEEEECSSTTEEEEEETTTCCEEEEGGGCCSTTEE
T ss_pred EEEEEEcCCCCeEEEcCCCCC---CCCCceEEEEeC-CCCChHHEEEEEECCCCcEEEEEECCCCcEEEeCCCcCCCCCe
Confidence 4478998888 9999988776 78999 999998 33468999998722 22 244 4678999999988889999
Q ss_pred eEEEeCCCCCCcceEeC
Q psy10463 587 VRILACSGFNRQRWTYD 603 (605)
Q Consensus 587 v~l~~C~~~~~Q~W~~~ 603 (605)
|++|+|++..+|+|.+.
T Consensus 84 V~qW~~nGg~NQqW~l~ 100 (286)
T 3phz_A 84 IIGYRPTGGDNQKWIIS 100 (286)
T ss_dssp EEEECCCCCGGGCEEEE
T ss_pred EEEeCCCCChhcEEEEE
Confidence 99999999889999985
|
| >3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.6e-11 Score=104.23 Aligned_cols=75 Identities=23% Similarity=0.279 Sum_probs=63.0
Q ss_pred cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 513 FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 513 ~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
..++|+|..+++|||+.+. +.|.+|+| ++ +.+|+|.++ ..++|+. .+++|||+.+. ++|.+++
T Consensus 5 g~~~i~n~~sg~CLd~~~~--------~~v~~~~C-~g-~~~Q~W~~~-~~g~i~~~~sg~CLd~~~~-----~~v~~~~ 68 (118)
T 3a07_A 5 ASVTIRNAQTGRLLDSNYN--------GNVYTLPA-NG-GNYQRWTGP-GDGTVRNAQTGRCLDSNYD-----GAVYTLP 68 (118)
T ss_dssp EEECEEETTTCCEEEECTT--------CCEEEECC-CC-CGGGCEEEC-SSSCCEETTTCCEEEECTT-----CBEEEEC
T ss_pred ceEEEEECCCCcEEecCCC--------CeEEEECC-CC-CccCEEEEC-CCEEEEECCCCcEEecCCC-----CeEEEEc
Confidence 4678999999999999752 36899999 66 789999998 8889986 46799999863 3699999
Q ss_pred CCCCCCcceEeC
Q psy10463 592 CSGFNRQRWTYD 603 (605)
Q Consensus 592 C~~~~~Q~W~~~ 603 (605)
|++..+|+|.+.
T Consensus 69 C~g~~~Q~W~~~ 80 (118)
T 3a07_A 69 CNGGSYQKWLFY 80 (118)
T ss_dssp CCCCGGGCEEEC
T ss_pred cCCCccceEEEe
Confidence 998779999873
|
| >1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* | Back alignment and structure |
|---|
Probab=99.15 E-value=4.2e-11 Score=119.44 Aligned_cols=84 Identities=17% Similarity=0.192 Sum_probs=71.1
Q ss_pred cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeC
Q psy10463 513 FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 513 ~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
..++|++. +++|||+.+... .+|++|.+|+|.|..+.+|+|.|+ ..|+||. +++|||+.+ +++|++|.+++|
T Consensus 14 ~~~~i~~~-sg~CLDv~~~~~---~~g~~v~~~~c~~~~~~~Q~w~~~-~~g~ir~-~g~CLdv~g--~~~g~~v~~~~c 85 (267)
T 1abr_B 14 PTVRIGGR-DGMCVDVYDNGY---HNGNRIIMWKCKDRLEENQLWTLK-SDKTIRS-NGKCLTTYG--YAPGSYVMIYDC 85 (267)
T ss_dssp CEECEECG-GGCEEEEGGGCC---STTCBEEEECCCSSCCGGGCEEEC-TTSBEEE-TTEEEEESC--SSTTCBEEEECT
T ss_pred CeEEEEcC-CCCEEECCCCCC---CCCcEEEEEecCCCCChhcEEEEc-cCceEEE-CCEEEcccC--CCCCCEEEEEeC
Confidence 47899997 999999987655 578999999995455789999999 8899997 469999974 566899999999
Q ss_pred CCC--CCcceEeCC
Q psy10463 593 SGF--NRQRWTYDK 604 (605)
Q Consensus 593 ~~~--~~Q~W~~~~ 604 (605)
++. .+|+|.+..
T Consensus 86 ~~~~~~~Q~W~~~~ 99 (267)
T 1abr_B 86 TSAVAEATYWEIWD 99 (267)
T ss_dssp TTSCGGGSBCEECT
T ss_pred CCCCCccCEEEEec
Confidence 997 599999864
|
| >3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* | Back alignment and structure |
|---|
Probab=99.09 E-value=7e-11 Score=117.24 Aligned_cols=81 Identities=20% Similarity=0.324 Sum_probs=68.6
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
..+|++. +++|||+.+... .+|++|.+|+| ++ +.+|+|.++ ..|+|+. +++|||+.+ +.+|+.|.+++|+
T Consensus 4 ~~~i~~~-sg~cldv~~~~~---~~g~~v~~~~c-~~-~~~Q~w~~~-~~g~ir~-~g~CLd~~g--~~~g~~v~~~~c~ 73 (258)
T 3c9z_A 4 TRNIVGR-DGLCVDVRNGYD---TDGTPLQLWPC-GT-QRNQRWTFD-SDDTIRS-MGKCMTANG--LNNGSNIVIFNCS 73 (258)
T ss_dssp EEEEECG-GGCEEEEGGGCC---STTCBEEEECC-CC-CGGGCEEEC-TTSCEEE-TTEEEEEES--SSTTCEEEEECTT
T ss_pred eEEEECC-CCCeEECCCCCC---CCCcEEEEECC-CC-ChhccEEEc-CCCeEEE-CCeEEcccC--CCCCCEEEEEeCC
Confidence 4577876 899999987765 57899999999 65 689999999 8899988 569999975 5568999999999
Q ss_pred CC--CCcceEeCC
Q psy10463 594 GF--NRQRWTYDK 604 (605)
Q Consensus 594 ~~--~~Q~W~~~~ 604 (605)
+. .+|+|.+..
T Consensus 74 ~~~~~~Q~W~~~~ 86 (258)
T 3c9z_A 74 TAAENAIKWEVPI 86 (258)
T ss_dssp TSCGGGSCCBCCT
T ss_pred CCCCcCCEEEEcC
Confidence 97 599999864
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=6.9e-11 Score=124.28 Aligned_cols=80 Identities=20% Similarity=0.418 Sum_probs=67.5
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC------CceeecC-CCeeeecCCCCCCCCCce
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP------TDLIATD-ESVCLDVPEYENDISPRV 587 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~------~g~i~~~-~~~CLd~~~~~~~~g~~v 587 (605)
++|+|.++++|||+.+... |++|.+|+| |+ ..+|+|.++ . .|+|+.. +++|||+.+... |+.|
T Consensus 109 y~I~N~~SG~CLDv~g~~~-----Ga~V~l~~C-~g-~~nQ~W~lt-~~g~g~~~G~Irn~~sg~CLDv~g~s~--Ga~V 178 (432)
T 1vcl_A 109 TEIINLASGKCLDIEGSDG-----TGDIGVYDC-QN-LDDQYFYVR-SRGPELFYGRLRNEKSDLCLDVEGSDG--KGNV 178 (432)
T ss_dssp EEEEETTTCCEEEESSSSS-----CSBEEEECC-CC-CGGGCEEEC-CCCCEEEEEEEEETTTCCEEEESSSSS--CEEE
T ss_pred eEEEECCCCceeeecCCCC-----CCeEEEEeC-CC-CCccceeee-cCCCCccceEEEECCCCcEEEecCCCC--CCeE
Confidence 4999999999999986543 789999999 66 589999998 6 5788864 689999987654 7899
Q ss_pred EEEeCCCCCCcceEeCC
Q psy10463 588 RILACSGFNRQRWTYDK 604 (605)
Q Consensus 588 ~l~~C~~~~~Q~W~~~~ 604 (605)
++++|++..+|+|.+..
T Consensus 179 ~l~~C~g~~nQ~W~~~~ 195 (432)
T 1vcl_A 179 LMYSCEDNLDQWFRYYE 195 (432)
T ss_dssp EEECCCSCGGGCEEEET
T ss_pred EEEecCCCCCeeEEEeC
Confidence 99999997799999864
|
| >3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} | Back alignment and structure |
|---|
Probab=99.08 E-value=7.7e-11 Score=114.79 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=66.2
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCc--eee-cCCCeeeecCCCCC-CCCCceEEE
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTD--LIA-TDESVCLDVPEYEN-DISPRVRIL 590 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g--~i~-~~~~~CLd~~~~~~-~~g~~v~l~ 590 (605)
-.|+++.+++|||+.+.++ .+|++|++|+| ++ +.||+|.++..+| .|+ ..+++|||+.++.+ ++|+ |++|
T Consensus 60 Y~I~N~~SGKcLDV~g~sT---adGa~V~qW~~-nG-g~NQqW~l~~~~G~y~I~n~~SGkcLDV~~gsttanGa-V~qW 133 (286)
T 3phz_A 60 YTVRNAFAGSYMDLAGHAA---TDGTAIIGYRP-TG-GDNQKWIISQINDVWKIKSKETGTFVTLLNGDGGGTGT-VVGW 133 (286)
T ss_dssp EEEEETTTCCEEEEGGGCC---STTEEEEEECC-CC-CGGGCEEEEESSSCEEEEETTTCCEEEEETC---CCCE-EEEE
T ss_pred EEEEECCCCcEEEeCCCcC---CCCCeEEEeCC-CC-ChhcEEEEEcCCCeEEEEECCCCcEEEeCCCCcCCCce-EEEc
Confidence 3688989999999988776 78999999999 66 7899999973444 344 46889999777666 8899 9999
Q ss_pred eCC-CCCCcceEeC
Q psy10463 591 ACS-GFNRQRWTYD 603 (605)
Q Consensus 591 ~C~-~~~~Q~W~~~ 603 (605)
+|+ +..+|+|.+.
T Consensus 134 t~~tgg~NQqW~~~ 147 (286)
T 3phz_A 134 QNITNNTSQNWTFQ 147 (286)
T ss_dssp SCCCSSCTTCEEEE
T ss_pred cCCCCCccCcEEEE
Confidence 966 4559999875
|
| >2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-10 Score=115.63 Aligned_cols=83 Identities=20% Similarity=0.316 Sum_probs=69.8
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
.++|++. +++|||+.+... .+|++|.+|+|....+.+|+|.++ ..|.||. +++|||+.+ +++|+.|++++|+
T Consensus 10 ~~~i~~~-sg~cldv~~~~~---~~g~~v~~~~c~~~~~~~Q~W~~~-~~g~ir~-~g~cLdv~g--~~~g~~v~~~~c~ 81 (262)
T 2aai_B 10 IVRIVGR-NGLCVDVRDGRF---HNGNAIQLWPCKSNTDANQLWTLK-RDNTIRS-NGKCLTTYG--YSPGVYVMIYDCN 81 (262)
T ss_dssp EECEECG-GGCEEEEGGGCC---STTCBEEEECCCSSCCGGGCEEEC-TTSBEEE-TTEEEEESC--SSTTCBEEEEETT
T ss_pred eEEEEcC-CCceEEcCCCCC---CCCCEEEEeeCCCCCChhceEEEe-CCceEEE-CCEEEeccC--CCCCCEEEEEeCC
Confidence 7899987 999999987665 678999999993134789999999 8899998 469999965 5678999999999
Q ss_pred C--CCCcceEeCC
Q psy10463 594 G--FNRQRWTYDK 604 (605)
Q Consensus 594 ~--~~~Q~W~~~~ 604 (605)
+ ..+|+|.+..
T Consensus 82 ~~~~~~Q~W~~~~ 94 (262)
T 2aai_B 82 TAATDATRWQIWD 94 (262)
T ss_dssp TSCGGGSBCEECT
T ss_pred CCCCccceEEEcC
Confidence 9 5599999864
|
| >1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-10 Score=115.62 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=69.7
Q ss_pred cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeC
Q psy10463 513 FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 513 ~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
..++|++. +++|||+.+... .+|++|.+|+|++..+.+|+|.|+ ..|+||.. ++|||+.+ +.+|+.|.+++|
T Consensus 10 ~~~~i~~~-sg~ClDv~~~~~---~~g~~v~~~~c~~~~~~~Q~w~~~-~~g~ir~~-g~CLdv~~--~~~g~~v~~~~c 81 (263)
T 1m2t_B 10 PIVRIVGR-NGMTVDVRDDDF---HDGNQIQLWPSKSNNDPNQLWTIK-KDGTIRSN-GSCLTTYG--YTAGVYVMIFDC 81 (263)
T ss_dssp CEECEECG-GGCEEEEGGGCC---STTCBEEEECCCCSCCGGGCEEEC-TTSCEEET-TEEEEESC--SSTTCBEEEEET
T ss_pred CeEEEEcC-CCCEEECCCCCC---CCCCEEEEeeCCCCCChhceeEEC-CCCeEEEc-cEEEcccc--cCCCCEEEEEeC
Confidence 36789987 999999987655 578999999994245789999999 88999986 59999943 456899999999
Q ss_pred CC--CCCcceEeCC
Q psy10463 593 SG--FNRQRWTYDK 604 (605)
Q Consensus 593 ~~--~~~Q~W~~~~ 604 (605)
++ ..+|+|.+..
T Consensus 82 ~~~~~~~Q~W~~~~ 95 (263)
T 1m2t_B 82 NTAVREATIWQIWG 95 (263)
T ss_dssp TTSCGGGGCCEECT
T ss_pred CCCCCcccEEEECC
Confidence 99 4599999864
|
| >1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.3e-10 Score=115.06 Aligned_cols=79 Identities=19% Similarity=0.343 Sum_probs=66.5
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
.++|++ .+++|||+ +... .+|++|.+|+| |+ +.||+|.|+ ..|+|+.. ++|||+.+. + |+.|++++|+
T Consensus 5 ~~~i~~-~sg~ClDv-~~~~---~~g~~v~~~~c-~g-~~nQ~w~~~-~~g~ir~~-g~CLdv~g~--~-g~~v~~~~c~ 72 (254)
T 1ggp_B 5 TVRIAG-RDGFCADV-NGEG---QNGAAIILKKC-AE-NDNQLWTLK-REATIRSN-GGCLTTAAA--E-QAKAGIYDCT 72 (254)
T ss_dssp EEEEEC-GGGEEEEE-SSSC---CSSCBEEEEEC-CC-CTTTEEEEE-TTSCCBSS-SSEEEEECS--S-SCEEEEECTT
T ss_pred eEEEEC-CCCceEeC-CCCc---CCCcEEEEEcC-CC-CccceEEEc-CCCeEEEC-ceEEeccCC--C-CCEEEEEECC
Confidence 457888 79999999 6554 57899999999 66 589999999 78899884 699999764 4 8899999999
Q ss_pred CC--CCcceEeCC
Q psy10463 594 GF--NRQRWTYDK 604 (605)
Q Consensus 594 ~~--~~Q~W~~~~ 604 (605)
+. .+|+|.+..
T Consensus 73 ~~~~~~Q~W~~~~ 85 (254)
T 1ggp_B 73 QATAELSAWEIAD 85 (254)
T ss_dssp TSCHHHHCCEECT
T ss_pred CCCCcCCEEEEec
Confidence 97 499999864
|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.1e-10 Score=117.81 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=66.1
Q ss_pred EEEEEeecCchHHHHHHHHHHHh-cCCccCcceEEEEeCCCchhhHHHHHHHHHHhc----CCCeEEeecC--C--Ccch
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVIS-RSPRSMLKEILLVDDASTREFLKSSLDEYVAKL----SVPTRVIRSP--G--RVGL 163 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~-~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~----~~~v~~~~~~--~--~~G~ 163 (605)
|||||.||++ .|..+|+++.. +..+. +|||||||||+|+|.+ +++++.++. ..++.++... . |.|+
T Consensus 2 slVIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGStD~T~e-ia~~la~~~~~~~g~~vi~~~~~r~~~~n~Gk 76 (397)
T 2bo4_A 2 SLVVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYERDQTYE-AVERAAPEISRATGTPVSVRLQERLGTLRPGK 76 (397)
T ss_dssp CEEEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSCCHHHH-HHHHHHHHHHHHHSCCEEEEECCCCSSSSSSH
T ss_pred cEEEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCCccHHH-HHHHhhhhcccccCCeEEEEecccCCCCCCCH
Confidence 4455555543 47778877752 22333 6999999999999954 445333332 3334333323 3 7999
Q ss_pred HHHHHHHh----hhccCceEEEecCccc-cccccc
Q psy10463 164 IKARLLGA----RQAEGEILVFLDAHCE-CTLVFN 193 (605)
Q Consensus 164 ~~a~n~g~----~~a~g~~i~~lD~d~~-~~~~~~ 193 (605)
+.|.+.|+ ..|+|++++++|+|.. .++.|.
T Consensus 77 G~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i 111 (397)
T 2bo4_A 77 GDGMNTALRYFLEETQWERIHFYDADITSFGPDWI 111 (397)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHH
Confidence 99999999 8999999999999995 666554
|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.2e-09 Score=112.44 Aligned_cols=91 Identities=21% Similarity=0.265 Sum_probs=70.5
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhH-----HHHHHHHHHhcCCCeEEeecCC-----
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL-----KSSLDEYVAKLSVPTRVIRSPG----- 159 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~-----~~~~~~~~~~~~~~v~~~~~~~----- 159 (605)
.++|||||+|||+ ..+ |..++.+.+.. +|||||||||+|+|- .+.++++.+..+..+.++....
T Consensus 51 ~~iSVVIP~yNEE-~~l---I~~vL~~i~~~--~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEK-LHL---VDGVLKAIPHK--CPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCC-HHH---HHHHHHHSCTT--SCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCccc-HHH---HHHHHHcCCCC--cEEEEEECcCcccccchhhHHHHHHHHhhccccceEEEecCCcchhH
Confidence 4799999999999 444 66777766544 799999999977651 2345555555455566666554
Q ss_pred -----------------CcchHHHHHHHhhhc---cCceEEEecCcc
Q psy10463 160 -----------------RVGLIKARLLGARQA---EGEILVFLDAHC 186 (605)
Q Consensus 160 -----------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~ 186 (605)
+.|++.|...|+..| +|++++|+|+|.
T Consensus 125 ~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl 171 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN 171 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred HhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC
Confidence 359999999999999 999999999999
|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=111.63 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=80.0
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHH--H---HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREF--L---KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~--~---~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
..++|||||+|||+ ..+ |..++.+.+.. +|||+|||||+|++ + .+.++++.+..+..+.++....
T Consensus 50 ~~~iSVVIP~yNEE-~~l---I~~vL~~i~~~--~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~Vl~~~~p~v~ 123 (394)
T 2zu9_A 50 LGKMAVIVPMKNEK-LHL---VDGVLKAIPHK--CPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIMIHQKDPGLA 123 (394)
T ss_dssp HTTEEEEEEESSCC-HHH---HHHHHHHSCTT--SCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEEEETTCHHHH
T ss_pred hCCEEEEEecCccc-HHH---HHHHHHcCCCC--cEEEEEECcCcccccchhhHHHHHHHHhhccccceEEEecCCcchh
Confidence 35799999999999 544 66666666544 79999999996653 1 3456666665454667776654
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHc
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAE 310 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~ 310 (605)
+.|.+.|.-.|+..| +|++|+|+|+|. ..|..+.++++.+..
T Consensus 124 ~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~a 186 (394)
T 2zu9_A 124 KAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAA 186 (394)
T ss_dssp HHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHH
T ss_pred HHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhh
Confidence 259999999999999 999999999999 567777676665543
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.7e-10 Score=118.71 Aligned_cols=82 Identities=27% Similarity=0.546 Sum_probs=68.5
Q ss_pred cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 513 FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 513 ~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
+.|+|++..+++|||+.+... |++|.+|+| |+ +.+|+|.++ ..|.|++ .+++|||+.+..+ ++.|++++
T Consensus 154 ~~G~Irn~~sg~CLDv~g~s~-----Ga~V~l~~C-~g-~~nQ~W~~~-~~G~I~n~~Sg~CLDv~g~st--~a~V~l~~ 223 (432)
T 1vcl_A 154 FYGRLRNEKSDLCLDVEGSDG-----KGNVLMYSC-ED-NLDQWFRYY-ENGEIVNAKSGMCLDVEGSDG--SGNVGIYR 223 (432)
T ss_dssp EEEEEEETTTCCEEEESSSSS-----CEEEEEECC-CS-CGGGCEEEE-TTSCEEETTTCCEEEESSSSS--CSBEEEEC
T ss_pred cceEEEECCCCcEEEecCCCC-----CCeEEEEec-CC-CCCeeEEEe-CCCCEEeCCCCeEEEeCCCCC--CCeEEEEe
Confidence 468999988999999976532 689999999 66 789999999 7888886 4679999987554 27899999
Q ss_pred CCCCCCcceEeCC
Q psy10463 592 CSGFNRQRWTYDK 604 (605)
Q Consensus 592 C~~~~~Q~W~~~~ 604 (605)
|++..+|+|.+..
T Consensus 224 C~g~~nQ~W~~~~ 236 (432)
T 1vcl_A 224 CDDLRDQMWSRPN 236 (432)
T ss_dssp CCCCGGGCEECCG
T ss_pred cCCCCccEEEEec
Confidence 9987799999864
|
| >2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* | Back alignment and structure |
|---|
Probab=98.93 E-value=8.3e-10 Score=109.71 Aligned_cols=96 Identities=16% Similarity=0.173 Sum_probs=72.2
Q ss_pred cccCCCcCCCCCc----cccccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCee
Q psy10463 500 HVWPHHFLPMDDK----FFGRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVC 573 (605)
Q Consensus 500 ~v~p~~~~p~~~~----~~G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~C 573 (605)
.++||+....++. .-|+||+. .+++|||+.+. .+|++|.+++| |....+|+|.|+ ..|.|++ .+++|
T Consensus 160 ~l~~C~~~~~~Q~w~~~~~g~ir~~~~~~~CLd~~~~-----~~g~~v~l~~C-~~~~~~Q~W~~~-~~g~i~~~~sg~C 232 (262)
T 2aai_B 160 WIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSN-----IRETVVKILSC-GPASSGQRWMFK-NDGTILNLYSGLV 232 (262)
T ss_dssp EEECCCTTSSCCCEEECTTSCEEETTSTTEEEEECCS-----SCSSCEEEEES-TTCCTTSCCEEC-TTSCEECTTTCCE
T ss_pred EEEecCCCCCcCEEEEeCCccEEECCCCCceEccCCC-----CCCCeEEEEcC-CCCCCcCeEEEC-CCCcEEECCCCeE
Confidence 3567764333332 24788875 36899998532 35789999999 555789999999 7788875 57899
Q ss_pred eecCCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 574 LDVPEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 574 Ld~~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
||+.+ .+.+|..|.+++|++..+|+|.+.
T Consensus 233 Ldv~~-~~~~g~~v~~~~c~g~~~Q~W~~~ 261 (262)
T 2aai_B 233 LDVRA-SDPSLKQIILYPLHGDPNQIWLPL 261 (262)
T ss_dssp EEEGG-GCGGGCCEEEECCCCCGGGCCEEE
T ss_pred EeecC-CCCCCCEEEEEcCCCCccCcEEec
Confidence 99974 345688999999997669999874
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=98.92 E-value=9.1e-10 Score=117.59 Aligned_cols=81 Identities=21% Similarity=0.363 Sum_probs=67.6
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
.|.|+ ..+++|||+.+ + .+|+.|.+|+| ++ +.+|+|.++ ..|.|++ .+++|||+.+.++.+|+.|++++|
T Consensus 355 ~g~i~-~~sg~CLdv~~--~---~~G~~v~~~~C-~g-~~nQ~W~~~-~~G~i~~~~sg~cLdv~~~s~~~g~~v~~~~c 425 (436)
T 2d1z_A 355 AGELR-VYGDKCLDAAG--T---GNGTKVQIYSC-WG-GDNQKWRLN-SDGSIVGVQSGLCLDAVGGGTANGTLIQLYSC 425 (436)
T ss_dssp TSCEE-ETTTEEEEESS--S---STTCBEEEEEC-CC-CGGGCEEEC-TTSCEEETTTCCEEEEGGGCCSTTCBEEEECC
T ss_pred CceEE-ECCCeEEEECC--C---CCCceEEEEec-CC-CCCceEEEC-CCCeEEECCCCCeEecCCCCCCCCCEEEEEeC
Confidence 37777 45789999973 2 46899999999 66 689999999 7788875 578999998877778999999999
Q ss_pred CCCCCcceEeC
Q psy10463 593 SGFNRQRWTYD 603 (605)
Q Consensus 593 ~~~~~Q~W~~~ 603 (605)
++..+|+|.+.
T Consensus 426 ~g~~~Q~W~~~ 436 (436)
T 2d1z_A 426 SNGSNQRWTRT 436 (436)
T ss_dssp CCCGGGCEEEC
T ss_pred CCCCCceEEeC
Confidence 98779999874
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1e-09 Score=122.18 Aligned_cols=96 Identities=15% Similarity=0.274 Sum_probs=75.8
Q ss_pred ccCCCcCCCCC---ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeec
Q psy10463 501 VWPHHFLPMDD---KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDV 576 (605)
Q Consensus 501 v~p~~~~p~~~---~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~ 576 (605)
+++|+.-+... ...|+|+.. +++|||+.+..+ .+|++|.+|+| |+ +.||+|.++ ..|.|++ .+++|||+
T Consensus 515 l~~C~g~~nQ~w~~~~~g~ir~~-~~~CLdv~~~~~---~~G~~V~l~~C-~g-~~nQ~W~~~-~~g~i~~~~sg~CLdv 587 (614)
T 3a21_A 515 LWDCNGGPNQSWTYTSRKELVLY-GNKCLDAYNLGT---TNGTKVVIWDC-NG-QANQKWNIN-SDGTITNVNAGLCLDA 587 (614)
T ss_dssp EECCCCCGGGCBEECTTSCEEET-TTEEEEEGGGCC---STTCBEEEEEC-CC-CGGGCEEEC-TTSCEEETTTCCEEEE
T ss_pred EECCCCCCCceEEEECCceEEEC-CCcEEECCCCcC---CCCceEEEeCC-CC-CCccEEEEc-CCCeEEECCCCceEec
Confidence 57776532211 124888875 489999987655 57899999999 66 789999999 7788875 57899999
Q ss_pred CCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 577 PEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 577 ~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
.+.++.+|+.|++++|++..+|+|.+.
T Consensus 588 ~~~st~~g~~v~~~~C~g~~~Q~W~~~ 614 (614)
T 3a21_A 588 YNAATANGTSLVLWSCGTGDNQKWTVT 614 (614)
T ss_dssp GGGCCSTTCBEEEECCCSCGGGCEECC
T ss_pred CCCCCCCCCEEEEEcCCCCcccEEeeC
Confidence 887777899999999998669999874
|
| >1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 | Back alignment and structure |
|---|
Probab=98.89 E-value=1.8e-09 Score=106.80 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=64.6
Q ss_pred ccccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
-|+||.. .+++|||+.+. .+|++|.|++| |+ ..+|+|.|+ .+|.|++ .+++|||+.+ ...+|..|++++
T Consensus 171 ~g~ir~~~~~~~Cl~~~~~-----~~g~~V~l~~C-~g-~~~Q~W~~~-~~g~i~~~~sg~CLd~~~-~~~~~~~v~~~~ 241 (254)
T 1ggp_B 171 DKSIRSETNSDNCLTSAAD-----AGPKTILLALC-SG-PASQRWVFD-DDGSILSLYDDKQMDSEG-AAAAAKQIILWW 241 (254)
T ss_dssp TTEEEESSCTTEEECCCCC-----SSCCCCBEEEC-CC-CTTSCCEEC-TTSSEEETTTTEEEEESS-SCCSSSCEEEEC
T ss_pred CCCEEEeCCCCeEEecCCC-----CCCCEEEEEcC-CC-CccceEEEC-CCCcEEeCCCCeEEeCCC-CCCCCceEEEEc
Confidence 4788853 47899998532 35789999999 64 789999999 7787775 5789999987 455688999999
Q ss_pred CCCCCCcceEe
Q psy10463 592 CSGFNRQRWTY 602 (605)
Q Consensus 592 C~~~~~Q~W~~ 602 (605)
|++..+|+|.+
T Consensus 242 c~g~~~Q~W~~ 252 (254)
T 1ggp_B 242 NAAEPNQIWLA 252 (254)
T ss_dssp CCCCGGGCCEE
T ss_pred CCCCccceEEe
Confidence 99867999986
|
| >2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.8e-09 Score=118.77 Aligned_cols=83 Identities=20% Similarity=0.347 Sum_probs=69.0
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
.|+|++. +++|||+.+... .+|++|.+|+|....+.+|+|.++ ..|+|+.. ++|||+.+ +.+|+.|++++|+
T Consensus 317 ~~~I~~~-sg~CLDv~g~~~---~~G~~v~l~~C~~~g~~nQ~W~~~-~~G~ir~~-g~CLdv~g--~~~G~~V~~~~C~ 388 (570)
T 2vlc_A 317 TVRISGR-NGLCVRVRDGKY---NNGNPIQLWPCKQNSDVNQLWTLR-RDGTIRSN-GKCLTTNG--YSAGDYVMIYDCR 388 (570)
T ss_dssp EECEEEG-GGCEEEEGGGCC---STTCBEEEECCCCSCCGGGCEEEC-TTSBEEET-TEEEEESC--SSTTCBEEEECCC
T ss_pred eEEEECC-CCCeEEcCCCCC---CCCceEEEEecCCCCChhceEEEc-CCceEEEC-CeEEcccC--CCCCceEEEEecC
Confidence 6889884 899999987665 678999999993224689999999 88999984 69999964 5568999999999
Q ss_pred C--CCCcceEeCC
Q psy10463 594 G--FNRQRWTYDK 604 (605)
Q Consensus 594 ~--~~~Q~W~~~~ 604 (605)
+ ..+|+|.+..
T Consensus 389 g~~~~nQ~W~~~~ 401 (570)
T 2vlc_A 389 TPVTAASIWQFWA 401 (570)
T ss_dssp SSCCGGGBCEECT
T ss_pred CCCCCCceEEEcc
Confidence 9 5599999864
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.1e-09 Score=108.64 Aligned_cols=83 Identities=10% Similarity=0.118 Sum_probs=68.6
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEee----cCCCCCcceEEEEecC-C-c--eee-cCCCeeeecCCCCCCCCC
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLP----CTHLPVLTQMFVMKLP-T-D--LIA-TDESVCLDVPEYENDISP 585 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~----C~~~~~~nQ~w~~~~~-~-g--~i~-~~~~~CLd~~~~~~~~g~ 585 (605)
-.|++..+++|||+.+.++ .+|++|.+|+ | + +.+|+|.+... + | .|+ ..+++|||+.+..+++|+
T Consensus 60 Y~I~n~~SGkcLDV~~~st---anGt~V~qw~~~~~~-~--g~nQqW~l~~~~g~G~y~I~n~~SGk~LDV~g~stanGt 133 (293)
T 3ef2_A 60 FTLCNLFSGTYMDLYNGSS---EAGTAVNGWQGTAFT-T--NPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGA 133 (293)
T ss_dssp EEEEETTTCCEEEEGGGCC---STTEEEEEECCCTTC-C--CGGGCEEEEECTTSSSEEEEETTTCCEEEEGGGCCSTTE
T ss_pred EEEEECCCCCEEecCCCCC---CCCCEEEEeccCCCC-C--CCCcEEEEEEeCCCCEEEEEECCCCcEEEeCCCCCCCCC
Confidence 3788988999999987766 6899999999 7 3 35999999843 2 3 344 467899999988888999
Q ss_pred ceEEEe---CCCCCCcceEeC
Q psy10463 586 RVRILA---CSGFNRQRWTYD 603 (605)
Q Consensus 586 ~v~l~~---C~~~~~Q~W~~~ 603 (605)
+|++|+ |++..+|+|.+.
T Consensus 134 ~V~qw~~~~~~g~~nQqW~l~ 154 (293)
T 3ef2_A 134 KIAGWTGTWDEGNPHQKWYFN 154 (293)
T ss_dssp EEEEECCCSSCCCGGGCEEEE
T ss_pred EEEEEeccCCCCCcccEEEEE
Confidence 999999 888889999975
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=9.9e-10 Score=120.16 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=71.7
Q ss_pred ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC-Cc--eee-cCCCeeeecCCCCCCCCCce
Q psy10463 512 KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP-TD--LIA-TDESVCLDVPEYENDISPRV 587 (605)
Q Consensus 512 ~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~-~g--~i~-~~~~~CLd~~~~~~~~g~~v 587 (605)
....+|+|..+++|||+.+... .+|++|.+|+| ++ +.+|+|.++.. +| .|+ ..+++|||+.+..+.+|+.|
T Consensus 360 ~~~y~i~n~~sg~cLdv~~~~~---~~G~~v~~~~c-~g-~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v 434 (526)
T 3vsf_A 360 TTRYKLVNKNSGKVLDVLDGSV---DNAAQIVQWTD-NG-SLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVL 434 (526)
T ss_dssp CCCEEEEETTTCCEEEEGGGCC---STTEEEEEECC-CC-CGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEE
T ss_pred CccEEEEECCCCceEEecCCCC---CCCcEEEEccC-CC-CcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEE
Confidence 3567899999999999987665 67899999999 65 67999999832 23 344 35789999998878889999
Q ss_pred EEEeCCCCCCcceEeC
Q psy10463 588 RILACSGFNRQRWTYD 603 (605)
Q Consensus 588 ~l~~C~~~~~Q~W~~~ 603 (605)
++++|++..+|+|.+.
T Consensus 435 ~~~~c~g~~nQ~W~~~ 450 (526)
T 3vsf_A 435 IQYTSNGGYNQHWKFT 450 (526)
T ss_dssp EEECCCCCGGGCEEEE
T ss_pred EEecCCCCcccEEEEE
Confidence 9999999889999985
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=8.6e-10 Score=120.63 Aligned_cols=82 Identities=12% Similarity=0.163 Sum_probs=69.7
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCc----eeec-CCCeeeecCCCCCCCCCceEEE
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTD----LIAT-DESVCLDVPEYENDISPRVRIL 590 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g----~i~~-~~~~CLd~~~~~~~~g~~v~l~ 590 (605)
+|++..+++|||+.+... .+|++|.+|+| ++ +.||+|.++ ..| .|++ .+++|||+.+..+.+|+.|+++
T Consensus 411 ~i~n~~sg~cLdv~~~~~---~~G~~v~~~~c-~g-~~nQ~W~~~-~~g~g~y~i~~~~sg~cLdv~~~s~~~G~~v~~~ 484 (526)
T 3vsf_A 411 KIVNVKSGRALDVKDESK---EDGGVLIQYTS-NG-GYNQHWKFT-DIGDGYYKISSRHCGKLIDVRKWSTEDGGIIQQW 484 (526)
T ss_dssp EEEESSSCCEEEEGGGCC---STTEEEEEECC-CC-CGGGCEEEE-EEETTEEEEEESSSCCEEEEGGGCCSTTEEEEEE
T ss_pred EEEECCCCCEEEeCCCCC---CCCCEEEEecC-CC-CcccEEEEE-ECCCCeEEEEECCCCCEEEeCCCCCCCCCEEEEE
Confidence 788888999999987765 67899999999 65 589999998 544 5553 5789999998878889999999
Q ss_pred eCCCCCCcceEeC
Q psy10463 591 ACSGFNRQRWTYD 603 (605)
Q Consensus 591 ~C~~~~~Q~W~~~ 603 (605)
+|++..+|+|.+.
T Consensus 485 ~c~g~~nQ~W~~~ 497 (526)
T 3vsf_A 485 SDAGGTNQHWKLV 497 (526)
T ss_dssp CCCCCGGGCEEEE
T ss_pred cCCCCccCeEEEE
Confidence 9998779999985
|
| >1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* | Back alignment and structure |
|---|
Probab=98.86 E-value=2.3e-09 Score=106.79 Aligned_cols=79 Identities=13% Similarity=0.169 Sum_probs=65.4
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCC-CcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLP-VLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~-~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.|+||+ +++|||+.+ + .+|++|.+|+| ++. ..+|+|.++ ..|.|++ .+++|||+.+. ++|+.|.+++
T Consensus 59 ~g~ir~--~g~CLdv~g--~---~~g~~v~~~~c-~~~~~~~Q~W~~~-~~G~i~n~~sg~cLd~~~~--~~g~~v~~~~ 127 (267)
T 1abr_B 59 DKTIRS--NGKCLTTYG--Y---APGSYVMIYDC-TSAVAEATYWEIW-DNGTIINPKSALVLSAESS--SMGGTLTVQT 127 (267)
T ss_dssp TSBEEE--TTEEEEESC--S---STTCBEEEECT-TTSCGGGSBCEEC-TTSCEEETTTTEEEECCCS--STTCBCEEEC
T ss_pred CceEEE--CCEEEcccC--C---CCCCEEEEEeC-CCCCCccCEEEEe-cCCcEEeCCCCcEEeccCC--CCCcEEEEEe
Confidence 377886 689999964 2 46899999999 664 489999999 7788875 57899999863 5689999999
Q ss_pred CCCCCCcceEeC
Q psy10463 592 CSGFNRQRWTYD 603 (605)
Q Consensus 592 C~~~~~Q~W~~~ 603 (605)
|++..+|+|.+.
T Consensus 128 c~g~~~Q~W~~~ 139 (267)
T 1abr_B 128 NEYLMRQGWRTG 139 (267)
T ss_dssp CCCCGGGCCEES
T ss_pred CCCCccceEEEc
Confidence 998779999986
|
| >3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-09 Score=108.49 Aligned_cols=80 Identities=13% Similarity=0.130 Sum_probs=65.9
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCC-CcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLP-VLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~-~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.|+||+ +++|||+.+ . .+|++|.+|+| |+. ..+|+|.+. ..|.|++ .+++|||+.+ .++|+.|.+++
T Consensus 46 ~g~ir~--~g~CLd~~g--~---~~g~~v~~~~c-~~~~~~~Q~W~~~-~~g~i~n~~sg~cLd~~~--~~~g~~v~~~~ 114 (258)
T 3c9z_A 46 DDTIRS--MGKCMTANG--L---NNGSNIVIFNC-STAAENAIKWEVP-IDGSIINPSSGLVMTAPR--AASRTILLLED 114 (258)
T ss_dssp TSCEEE--TTEEEEEES--S---STTCEEEEECT-TTSCGGGSCCBCC-TTSCCBCTTTCCEEECSS--SSTTCBCEEEC
T ss_pred CCeEEE--CCeEEcccC--C---CCCCEEEEEeC-CCCCCcCCEEEEc-CCCeEEECCCCcEEecCC--CCCCcceEEEc
Confidence 478887 689999975 2 46899999999 664 589999998 7788875 5789999986 35689999999
Q ss_pred CCCCCCcceEeCC
Q psy10463 592 CSGFNRQRWTYDK 604 (605)
Q Consensus 592 C~~~~~Q~W~~~~ 604 (605)
|++..+|+|.+..
T Consensus 115 c~~~~~Q~W~~~~ 127 (258)
T 3c9z_A 115 NIYAASQGWTVTN 127 (258)
T ss_dssp CCCCGGGCCEEES
T ss_pred cCCCCccEEEEcC
Confidence 9987799999853
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.9e-09 Score=107.00 Aligned_cols=85 Identities=11% Similarity=0.084 Sum_probs=68.5
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCC--CCcceEEEEec---CCce--ee-cCCCeeeecCCCCCCCCC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHL--PVLTQMFVMKL---PTDL--IA-TDESVCLDVPEYENDISP 585 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~--~~~nQ~w~~~~---~~g~--i~-~~~~~CLd~~~~~~~~g~ 585 (605)
.-.|+++.+++|||+.+.++ .+|++|.+|+| |+ ...+|+|.++. .+|. |+ ..+++|||+.+..+++|+
T Consensus 7 ~Y~I~N~~SGk~LDV~g~st---anGa~Vqqw~~-~g~ng~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stanGt 82 (293)
T 3ef2_A 7 IYHIENAGVPSAIDLKDGSS---SDGTPIVGWQF-TPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGT 82 (293)
T ss_dssp EEEEEESSSSCEEEEGGGCC---STTEEEEEECC-CTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTE
T ss_pred EEEEEECCCCCEEEcCCCCC---CCCcEEEEeec-CCCCCCccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCCCC
Confidence 44789999999999987766 78999999998 43 35799999984 1343 44 357899999988888999
Q ss_pred ceEEEe----CCCCCCcceEeC
Q psy10463 586 RVRILA----CSGFNRQRWTYD 603 (605)
Q Consensus 586 ~v~l~~----C~~~~~Q~W~~~ 603 (605)
+|++|+ |.+. +|+|.+.
T Consensus 83 ~V~qw~~~~~~~g~-nQqW~l~ 103 (293)
T 3ef2_A 83 AVNGWQGTAFTTNP-HQLWTIK 103 (293)
T ss_dssp EEEEECCCTTCCCG-GGCEEEE
T ss_pred EEEEeccCCCCCCC-CcEEEEE
Confidence 999999 7654 9999975
|
| >2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.7e-09 Score=119.00 Aligned_cols=113 Identities=15% Similarity=0.203 Sum_probs=82.9
Q ss_pred HHhhhcCCccccccccc-------------------------ccCCCcCCCCCc----cccccccc-cccccccccccCC
Q psy10463 484 ELRKQLKCHSFKWYLTH-------------------------VWPHHFLPMDDK----FFGRIRHV-QTHKCVEKPLAKG 533 (605)
Q Consensus 484 ~lr~~l~ck~f~wyl~~-------------------------v~p~~~~p~~~~----~~G~ir~~-~~~~CLD~~~~~~ 533 (605)
.+.....+...+|++.+ +++|+.....+. .-|.||+. .+++|||+.+ ..
T Consensus 426 ~~~~C~g~~nQ~W~~~~~~~~~~~~i~~~s~~CLD~~g~~v~l~~C~g~~~~Q~W~~~~dG~ir~~~~~~~CLd~~~-~~ 504 (570)
T 2vlc_A 426 TVQADIYASRQGWLAGNNTEPFVTSIVGFNDLCMQANGDAMWVVECESSKAEQKWALYPDGSIRPHQDRDRCLTSTD-NH 504 (570)
T ss_dssp EEECCCCCGGGCEEECSCCSCEEECEECGGGEEEEEETTEEEEEECCTTCSTTCEEECTTSCEEETTCTTEEEEESC-TT
T ss_pred EEEccCCCCcceEEEeecccccceecccccceeccccccceEEEecCCCCcCcEEEEcCCCeEEECCCCCeEecccc-cc
Confidence 34445556778898874 355654422332 23788865 5789999842 12
Q ss_pred CCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 534 SMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 534 ~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
.+|+.|.+++| +....+|+|.++ ..|.|.+ .+++|||+.+. +.+|+.|++|+|+++.+|+|.+.
T Consensus 505 ---~~G~~V~l~~C-~~~~~~Q~W~~~-~~G~i~n~~sg~cLDv~~~-~~~g~~v~~~~c~g~~nQ~W~~v 569 (570)
T 2vlc_A 505 ---SQGSIIIISSC-SPGSEGQRWVFM-NDGTILNLKNGLVMDVKGS-DPSLHQIIIWPATGKPNQKWLPL 569 (570)
T ss_dssp ---STTCBEEEEES-TTCCGGGCCEEC-TTSSEECTTTCCEEEEGGG-CGGGCCEEEECCCSSGGGCCEEC
T ss_pred ---CCCCEEEEEeC-CCCCCCCEEEEc-CCCCEEECCCCcEEeccCC-CCCCCeEEEEcCCCCcccceEec
Confidence 45889999999 445789999999 7788875 57899999875 36789999999998889999874
|
| >1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* | Back alignment and structure |
|---|
Probab=98.79 E-value=3.6e-09 Score=105.10 Aligned_cols=82 Identities=21% Similarity=0.306 Sum_probs=65.5
Q ss_pred ccccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
-|.|+.. ...+||+..+. .+|++|.+++| +....+|+|.+. ..|.|++ .+++|||+.+ .+.+|+.|++++
T Consensus 179 ~g~ir~~~~~~lcl~~~~~-----~~G~~v~~~~C-~~~~~~Q~W~~~-~~g~i~~~~sg~cLDv~~-~~~~g~~v~~~~ 250 (263)
T 1m2t_B 179 DGSIRPKQLQSQCLTNGRD-----SISTVINIVSC-SAGSSGQRWVFT-NEGAILNLKNGLAMDVAQ-ANPSLQRIIIYP 250 (263)
T ss_dssp TSCEEETTCTTEEEECSSC-----STTCBCEEEES-TTCCGGGCEEEC-TTSCEEETTTCCEEEEGG-GCGGGCCEEEEC
T ss_pred CCeEEEcCCCceeeccCCc-----CCCCEEEEEEC-CCCCcccEEEEc-CCCCEEECCCCeEEecCC-CCCCCCEEEEEe
Confidence 3778775 46788887432 35789999999 444789999999 7787775 5789999987 666789999999
Q ss_pred CCCCCCcceEeC
Q psy10463 592 CSGFNRQRWTYD 603 (605)
Q Consensus 592 C~~~~~Q~W~~~ 603 (605)
|++..+|+|.+.
T Consensus 251 c~g~~nQ~W~~~ 262 (263)
T 1m2t_B 251 ATGNPNQMWLPV 262 (263)
T ss_dssp CCCCGGGCCEEE
T ss_pred CCCCccCEEEec
Confidence 998779999873
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=98.67 E-value=9e-09 Score=102.80 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=65.0
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec---CCce--eec--CCCeeeecCCCCCCCCCceE
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL---PTDL--IAT--DESVCLDVPEYENDISPRVR 588 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~---~~g~--i~~--~~~~CLd~~~~~~~~g~~v~ 588 (605)
.|++..+++||+..+ .+|+.|.+|.| ++ +.+|+|.++. .+|. |+. .+++|||+.+..+++|+.|+
T Consensus 198 ~i~~~~s~~~l~~~s------~~g~~v~~~~~-~g-~~~Q~W~~~~~~~~~G~y~i~n~~~sgk~LDV~~~stanGt~v~ 269 (286)
T 3aj6_A 198 TLKCQENNRYLTWIQ------NSNNYVETYQS-TD-SLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVI 269 (286)
T ss_dssp EEEETTTCCEEEECC------STTCBEEEECC-CS-SGGGCEEEEEETTEEEEEEEEETTEEEEEEEEGGGCCSTTCBEE
T ss_pred EEEECCCCEEEeccC------CCCCEEEEEeC-CC-CcccEEEEEeccCCCCEEEEEECCCCCeEEEeCCCCCCCCCEEE
Confidence 488888899999753 34689999999 55 6799999952 3454 333 25799999999999999999
Q ss_pred EEeCCCCCCcceEeC
Q psy10463 589 ILACSGFNRQRWTYD 603 (605)
Q Consensus 589 l~~C~~~~~Q~W~~~ 603 (605)
+|+|++..+|+|.+.
T Consensus 270 ~w~~~g~~nQ~W~~~ 284 (286)
T 3aj6_A 270 VDSYHGNTNQQWIIN 284 (286)
T ss_dssp EEECCCCGGGCEEEE
T ss_pred EEcCCCCcccCEEEE
Confidence 999999999999975
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.7e-08 Score=90.24 Aligned_cols=80 Identities=5% Similarity=-0.117 Sum_probs=65.4
Q ss_pred ccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceE----EEEecC-C---ce--eecCCCeeeecCCCCCCC
Q psy10463 515 GRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQM----FVMKLP-T---DL--IATDESVCLDVPEYENDI 583 (605)
Q Consensus 515 G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~----w~~~~~-~---g~--i~~~~~~CLd~~~~~~~~ 583 (605)
-+|+|+. +++|||+.+..+ .+|++|.+|.| ++ +.||+ |.++.. + |. |+.. ++|||+.+..+++
T Consensus 7 Y~I~n~~~sgk~lDv~~~st---a~Gt~V~~w~~-~g-~~nQ~~~~~W~~~~~~~~~~g~y~i~n~-G~~Ldv~~~~ta~ 80 (148)
T 3nbc_A 7 YNITNVAYTNRLIDLTGSNP---AENTLIIGHHL-NK-TPSGYGNQQWTLVQLPHTTIYTMQAVNP-QSYVRVRDDNLVD 80 (148)
T ss_dssp EEEEESSCTTCEEEEGGGCC---STTEEEEEECC-CS-TTTCCGGGCEEEEECTTSSEEEEEESSS-CCEEEEGGGCCST
T ss_pred EEEEEecCCCCeEECCCCcC---CCCcEEEEeCC-CC-ChhheeecEEEEEECCCcccceEEEEEC-CcEEEccCCCCCC
Confidence 4789999 999999998776 78999999999 65 78999 999832 3 44 3344 7999999888888
Q ss_pred CCceEEEeCCCCCCcceEeCC
Q psy10463 584 SPRVRILACSGFNRQRWTYDK 604 (605)
Q Consensus 584 g~~v~l~~C~~~~~Q~W~~~~ 604 (605)
|+.|+.++| +|+|.+..
T Consensus 81 Gt~v~~~~~----~q~W~i~~ 97 (148)
T 3nbc_A 81 GAALVGSQQ----PTPVSIES 97 (148)
T ss_dssp TCBEEEESS----CCCEEEEE
T ss_pred CcEEecCCC----CcEEEEEE
Confidence 999999876 58998753
|
| >1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} | Back alignment and structure |
|---|
Probab=98.60 E-value=3.1e-08 Score=99.07 Aligned_cols=83 Identities=10% Similarity=0.207 Sum_probs=64.1
Q ss_pred cccc-ccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec---CCce--eec--CCCeeeecCCCCCCCCCce
Q psy10463 516 RIRH-VQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL---PTDL--IAT--DESVCLDVPEYENDISPRV 587 (605)
Q Consensus 516 ~ir~-~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~---~~g~--i~~--~~~~CLd~~~~~~~~g~~v 587 (605)
.|++ ..+++|||+.+. .|+.|.+|.|..+...+|+|.+.. .+|. |+. .+++|||+.++.+++|+.|
T Consensus 197 ~i~~~~~s~~~L~~~~~------~G~~v~~~~~~~~~~~~Q~W~~~~~~~~~G~y~i~n~~~sg~~LDv~~~stanGt~v 270 (288)
T 1ybi_A 197 QFFNTILSNGVLTWIFS------NGNTVRVSSSNDQNNDAQYWLINPVSDTDETYTITNLRDTTKALDLYGGQTANGTAI 270 (288)
T ss_dssp EEEETTSSSEEEEECGG------GTTBEEEEECCCSCCGGGCEEEEECTTCSSEEEEEETTEEEEEEEEGGGCCSTTCBE
T ss_pred EEEeccCCceEEEecCC------CCCEEEEEecCCCCChhcEEEeeeecCCCCEEEEEECCCCCeEEEECCCCCCCCCEE
Confidence 4555 358899998642 368899999932334699999873 2453 343 4579999999999999999
Q ss_pred EEEeCCCCCCcceEeCC
Q psy10463 588 RILACSGFNRQRWTYDK 604 (605)
Q Consensus 588 ~l~~C~~~~~Q~W~~~~ 604 (605)
++|+|++..+|+|.+.+
T Consensus 271 ~~w~~~g~~nQ~W~~~~ 287 (288)
T 1ybi_A 271 QVFNYHGDDNQKWNIRN 287 (288)
T ss_dssp EEEECCCCGGGCEEEEC
T ss_pred EEEcCCCChhhcEEeeC
Confidence 99999999999999864
|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=3.1e-07 Score=93.83 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=74.1
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEee---------cCC
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR---------SPG 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~---------~~~ 159 (605)
++.++|||++||.. + |.++|+|+++|.+....+||||.||||.+++ .++++.+ ..+|+.+. .++
T Consensus 1 ~~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~-~~vi~~~----~~~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 1 LAVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET-AQVIASY----GSAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH-HHHHHTT----GGGSEEEECSCCCCCCCCTT
T ss_pred CCcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH-HHHHHHc----CCceEEEEcCCccccccchh
Confidence 35689999999999 8 9999999999987655579999999998876 3344443 22344432 455
Q ss_pred CcchH----------HHHHHHhhhccCceEEEecCccccccccc
Q psy10463 160 RVGLI----------KARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 160 ~~G~~----------~a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
|.|.. .|+|.....++++++++||.|+.+.+++.
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~ 117 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFF 117 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHH
T ss_pred hcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHH
Confidence 66753 45666666678999999999999987664
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=6.7e-08 Score=86.32 Aligned_cols=76 Identities=9% Similarity=0.071 Sum_probs=60.3
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC--Cce--ee-cCCCeeeecCCCCCCCCCceEE
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP--TDL--IA-TDESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~--~g~--i~-~~~~~CLd~~~~~~~~g~~v~l 589 (605)
-+|+++ ++|||+.+..+ .+|+.|..|++ +|+|.+... +|. |. .++++|||+. .+++|++|++
T Consensus 62 y~i~n~--G~~Ldv~~~~t---a~Gt~v~~~~~------~q~W~i~~~~~~G~y~I~~~~sg~~Ldv~--stanGt~i~~ 128 (148)
T 3nbc_A 62 MQAVNP--QSYVRVRDDNL---VDGAALVGSQQ------PTPVSIESAGNSGQFRIKIPNLGLALTLP--SDANSTPIVL 128 (148)
T ss_dssp EEESSS--CCEEEEGGGCC---STTCBEEEESS------CCCEEEEECSSTTCEEEECTTSSEEEECC--CSSTTEECEE
T ss_pred EEEEEC--CcEEEccCCCC---CCCcEEecCCC------CcEEEEEEccCCCeEEEEeCCCCeEEEee--cCCCCcEEEE
Confidence 367776 89999987665 67899998887 488998731 453 33 4678999998 4678999999
Q ss_pred EeCCC-CCCcceEeC
Q psy10463 590 LACSG-FNRQRWTYD 603 (605)
Q Consensus 590 ~~C~~-~~~Q~W~~~ 603 (605)
|.|++ ..||+|.|.
T Consensus 129 w~~~~g~~nQ~W~~~ 143 (148)
T 3nbc_A 129 GEVDETSTNQLWAFE 143 (148)
T ss_dssp EECCSSCGGGCEEEE
T ss_pred ecCCCCCCCcEEEEE
Confidence 99999 669999985
|
| >2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.2e-06 Score=98.89 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=61.6
Q ss_pred cccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC-------Ccee--e--cCCCeeeecCCCCCCC
Q psy10463 516 RIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP-------TDLI--A--TDESVCLDVPEYENDI 583 (605)
Q Consensus 516 ~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~-------~g~i--~--~~~~~CLd~~~~~~~~ 583 (605)
.|++.. +++|||+. .++ .+|++|++|+| ++ +.||+|.+. . +|.. . ...++|||+.+ +
T Consensus 652 tI~n~~~sgk~LDV~-gst---anGt~Vq~w~~-nG-~~nQqW~l~-~~g~~~~~dG~y~I~s~~s~gk~LDv~~----~ 720 (841)
T 2vse_A 652 IFRNYKNPNKIFGTN-GQP---INDIPLKAQDV-TG-QNNQKWYLR-HLNSSNNFTGYFNISSKKNFNKIITMNS----N 720 (841)
T ss_dssp EEEESSCTTEEEECS-SSC---CTTEECEEEEC-CC-CGGGCEEEE-ETTSSCCCCEEEEEEESSCTTEEEEECT----T
T ss_pred EEEEcCCCceEEEec-cCC---CCCCEEEEeCC-CC-ChhhceEEe-cCcccccCCCeEEEEecCCcccEEEecC----C
Confidence 688877 89999997 444 67999999999 65 789999887 4 2333 2 22379999875 4
Q ss_pred CCceEEEeCCCCCCcceEeC
Q psy10463 584 SPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 584 g~~v~l~~C~~~~~Q~W~~~ 603 (605)
|+.|++|+|++..+|+|.+.
T Consensus 721 Ganvq~~~~nG~~~Q~W~l~ 740 (841)
T 2vse_A 721 KTQAVIFDNIGINNQSWKLK 740 (841)
T ss_dssp SSBEEEEECCCCGGGCEEEE
T ss_pred CcceEEecCCCCccCcEEEe
Confidence 78999999999999999983
|
| >2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A | Back alignment and structure |
|---|
Probab=98.02 E-value=5.8e-06 Score=93.45 Aligned_cols=79 Identities=11% Similarity=0.132 Sum_probs=64.5
Q ss_pred ccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec-CCce--eec--CCCeeeecCCCCCCCCCceEE
Q psy10463 516 RIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL-PTDL--IAT--DESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 516 ~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~-~~g~--i~~--~~~~CLd~~~~~~~~g~~v~l 589 (605)
+|++. .+++||++.. +|+.+.++.| ++ ..+|+|.+.. .+|. |+. .+++|||+.+..+++|+.|++
T Consensus 466 ~I~n~~~sg~~Ldv~~-------~g~~v~~~~~-~g-~~~QqW~l~~~gdG~y~I~n~~~Sg~~LDV~~~stanGt~v~~ 536 (841)
T 2vse_A 466 KIKSLKYPNYSLAWDS-------NNTRTIVAAT-GD-YNDQYWLIERNEDNTYIIRNYENRKIVLDLSNGSTTDGNGLLG 536 (841)
T ss_dssp EEEESSCTTCEEEECT-------TTTCBEEEEC-SC-CGGGEEEEEECTTSCEEEEESSSTTEEEEEGGGCCSTTCCEEE
T ss_pred EEEecCCCceEEEecC-------CCCcEEEecC-CC-CcccEEEEEECCCCeEEEEEcCCCCceEecCCCCCCCCCeEEE
Confidence 78884 7899999853 3578999999 55 6799999872 2443 554 468999999888889999999
Q ss_pred EeCCCCCCcceEeC
Q psy10463 590 LACSGFNRQRWTYD 603 (605)
Q Consensus 590 ~~C~~~~~Q~W~~~ 603 (605)
|+|++..+|+|.+.
T Consensus 537 w~~ng~~nQqW~~~ 550 (841)
T 2vse_A 537 FEFHGGINQRWIIK 550 (841)
T ss_dssp EECCCCGGGCEEEE
T ss_pred eCCCCCccCcceEe
Confidence 99999889999874
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=97.99 E-value=5.8e-06 Score=82.40 Aligned_cols=78 Identities=10% Similarity=0.089 Sum_probs=57.8
Q ss_pred ccccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC--Ccee--e-cCCCeeeecCCCCCCCCCce
Q psy10463 514 FGRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP--TDLI--A-TDESVCLDVPEYENDISPRV 587 (605)
Q Consensus 514 ~G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~--~g~i--~-~~~~~CLd~~~~~~~~g~~v 587 (605)
...|++. .+++|||+. .+|+.|.+|.| ++ +.+|+|+++.. .|.. + ..+++||+... ..|+.|
T Consensus 151 ~Y~i~~~~~sgk~lDv~-------~~g~~V~~w~~-~g-~~nQ~W~~~~~~~~~~y~i~~~~s~~~l~~~s---~~g~~v 218 (286)
T 3aj6_A 151 NCKLQTQLNSDRFLSKN-------LNSQIIVLWQW-ID-SSRQKWIIEYNETKSAYTLKCQENNRYLTWIQ---NSNNYV 218 (286)
T ss_dssp EEEEEETTCTTCEEEEC-------TTSSBEEEECC-CC-CGGGCEEEEEETTTTEEEEEETTTCCEEEECC---STTCBE
T ss_pred eEEEEecCCCceEEEec-------CCCceEEEeCC-CC-CccceEEEEECCCCCeEEEEECCCCEEEeccC---CCCCEE
Confidence 3467665 467999993 24789999999 55 78999998721 2333 3 34679999763 246899
Q ss_pred EEEeCCCCCCcceEeC
Q psy10463 588 RILACSGFNRQRWTYD 603 (605)
Q Consensus 588 ~l~~C~~~~~Q~W~~~ 603 (605)
++++|++..+|+|.+.
T Consensus 219 ~~~~~~g~~~Q~W~~~ 234 (286)
T 3aj6_A 219 ETYQSTDSLIQYWNIN 234 (286)
T ss_dssp EEECCCSSGGGCEEEE
T ss_pred EEEeCCCCcccEEEEE
Confidence 9999998889999984
|
| >2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.7e-05 Score=71.21 Aligned_cols=133 Identities=18% Similarity=0.177 Sum_probs=78.4
Q ss_pred HHHHCCCCEEEEeCCCCCChHHHHHHHHhh----ccCCEEEEecCC---cccCcChHHHHHHHHHcCCcEEEeeeEeeec
Q psy10463 252 YVAKLSVPTRVIRSPGRVGLIKARLLGARQ----AEGEILVFLDAH---CECTLGWLENLVARVAEDRTRVVCPVIDIIS 324 (605)
Q Consensus 252 ~~~~~~~~v~~i~~~~n~G~~~arN~G~~~----A~gd~i~flD~D---~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~ 324 (605)
...+.+..+.+... ..-+..|||..+.. ...++++|+|+| ...+|+.+.+|+ +.+.. +|++....-.
T Consensus 20 ~l~~~gi~~~l~~~--~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl---~~g~D-VV~GsYp~K~ 93 (203)
T 2c0n_A 20 FLVKNDIEYVILSR--RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF---NEGYD-VVCGYYYLKT 93 (203)
T ss_dssp HHHHTTCCEEEECC--CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH---HHTCS-EEEEECBCTT
T ss_pred HHHhCCCeEEEEcc--ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH---hCCCC-EEEEEeeccC
Confidence 33334445555554 35578999987765 467999999999 999999999988 33433 4443221100
Q ss_pred CCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhC--CC----Ccccccc
Q psy10463 325 DVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIG--AY----DEEMQVW 398 (605)
Q Consensus 325 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG--gf----De~~~~~ 398 (605)
.+ ....+...|. ......+.....+|+++|+|++|+++- .| +++..-|
T Consensus 94 ~~--------~~s~~a~~y~------------------~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~ 147 (203)
T 2c0n_A 94 LR--------GYSVYRKDWE------------------KEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHW 147 (203)
T ss_dssp SS--------SBSEESSSBC------------------SSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------
T ss_pred CC--------ccchHHHHHH------------------HhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccc
Confidence 00 0001110110 001112455677889999999999983 23 3334446
Q ss_pred cchhhHHHHHHHHcCCeE
Q psy10463 399 GGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 399 g~ED~dl~~Rl~~~G~~i 416 (605)
-+||+.||..+...|+-+
T Consensus 148 ~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 148 IGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp CCHHHHHHHHHCCCEEEE
T ss_pred cCCceEEEeccccccccc
Confidence 789999999998888665
|
| >1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} | Back alignment and structure |
|---|
Probab=97.84 E-value=1.7e-05 Score=79.09 Aligned_cols=78 Identities=13% Similarity=0.083 Sum_probs=57.0
Q ss_pred ccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC--Cce--eec--CCCeeeecCCCCCCCCCce
Q psy10463 515 GRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP--TDL--IAT--DESVCLDVPEYENDISPRV 587 (605)
Q Consensus 515 G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~--~g~--i~~--~~~~CLd~~~~~~~~g~~v 587 (605)
-+|++.. +++|||+.. .+|+.|.+|.| ++ +.+|+|+++.. .+. |+. .+++|||+... .|+.|
T Consensus 150 y~I~~~~s~~~vldv~~------~~g~~v~~w~~-~g-~~nQ~W~~~~~~~~~~Y~i~~~~~s~~~L~~~~~---~G~~v 218 (288)
T 1ybi_A 150 CKISPILDLNKVVQQVD------VTNLNVNLYTW-DY-GRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFS---NGNTV 218 (288)
T ss_dssp EEEEETTCTTEEEEESS------SSCCBEEEEEC-CC-CGGGCEEEEEETTTTEEEEEETTSSSEEEEECGG---GTTBE
T ss_pred EEEEEccCCCeEEEeeC------CCCCEEEEecC-CC-CccCEEEEEEccCCCeEEEEeccCCceEEEecCC---CCCEE
Confidence 4666654 459999963 34789999999 55 78999998721 232 332 56799998743 37899
Q ss_pred EEEeCCCC--CCcceEeC
Q psy10463 588 RILACSGF--NRQRWTYD 603 (605)
Q Consensus 588 ~l~~C~~~--~~Q~W~~~ 603 (605)
+++.|++. .+|+|.+.
T Consensus 219 ~~~~~~~~~~~~Q~W~~~ 236 (288)
T 1ybi_A 219 RVSSSNDQNNDAQYWLIN 236 (288)
T ss_dssp EEEECCCSCCGGGCEEEE
T ss_pred EEEecCCCCChhcEEEee
Confidence 99999754 39999975
|
| >1dqg_A Mannose receptor; beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, sugar binding protein; 1.70A {Mus musculus} SCOP: b.42.2.2 PDB: 1dqo_A* 1fwu_A* 1fwv_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00016 Score=62.12 Aligned_cols=74 Identities=20% Similarity=0.380 Sum_probs=55.1
Q ss_pred ccccccccccccccccCCCCCCCCCCeEE-eecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCC
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASL-LPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSG 594 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l-~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~ 594 (605)
.|.|.+.++||.+.. +.+++ ..| +....+|+|..+.....+...+.+||.+.. ..+..+|.|++|+.
T Consensus 7 ~I~~e~~~~Cl~a~~---------~~~v~~~~C-~~~s~~q~WkWvS~~rLfnlgs~~CLGl~~--~~~~~~l~l~~CD~ 74 (135)
T 1dqg_A 7 LIYNEDHKRCVDALS---------AISVQTATC-NPEAESQKFRWVSDSQIMSVAFKLCLGVPS--KTDWASVTLYACDS 74 (135)
T ss_dssp CEEETTTTEEEEEEE---------TTEEEEESC-CTTCGGGCEEESSSSCEEETTTTEEEECSS--SCTTCBCEEECCCT
T ss_pred EEEECCCCceeeecC---------ccEEEeccC-CCCChhheEEEeccCceeccCcCcccccCC--CCCcceeEEEecCC
Confidence 467778899998753 35666 599 656789999998344445557789999943 23345899999997
Q ss_pred CC-CcceE
Q psy10463 595 FN-RQRWT 601 (605)
Q Consensus 595 ~~-~Q~W~ 601 (605)
.. .|+|+
T Consensus 75 ~~~~l~W~ 82 (135)
T 1dqg_A 75 KSEYQKWE 82 (135)
T ss_dssp TCTTSCEE
T ss_pred CCccceEE
Confidence 66 89998
|
| >1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00022 Score=75.08 Aligned_cols=64 Identities=19% Similarity=0.428 Sum_probs=52.7
Q ss_pred ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecC--CCeeeecCCCCCCCCCceEEEeCCCCCCcc
Q psy10463 522 THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATD--ESVCLDVPEYENDISPRVRILACSGFNRQR 599 (605)
Q Consensus 522 ~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~--~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~ 599 (605)
.++|||+.+. +.|.-|.| |+.+.+|.|.|+ ..|.+++. ..+|||..+- . .+.+|+..-.|+
T Consensus 474 NnrCLdv~~~--------~~ls~~~C-~~~~~nQsfiyD-q~gRYvSa~n~~~CLD~~~L------~-~lq~C~~sLTQk 536 (721)
T 1xez_A 474 NNRCIQVDAQ--------GRLTANMC-DSQQSAQSFIYD-QLGRYVSASNTKLCLDGAAL------D-ALQPCNQNLTQR 536 (721)
T ss_dssp TTEEEEECTT--------CBEEEECC-CTTCGGGCEEEC-TTSCEEETTEEEEECCTTCT------T-BCEECCSCGGGC
T ss_pred CCeeEEeecC--------ceEEEEEc-CCCCccceeeEc-cCCcEEEccchhhccccCch------h-hhhhccCCccce
Confidence 6799999642 47899999 777899999999 88888753 4699998763 2 799999877999
Q ss_pred eEe
Q psy10463 600 WTY 602 (605)
Q Consensus 600 W~~ 602 (605)
|.+
T Consensus 537 W~W 539 (721)
T 1xez_A 537 WEW 539 (721)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
|
| >2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0023 Score=54.72 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=60.9
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC----Cceee--cC--CCeeeecCCCCCCCCCce
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP----TDLIA--TD--ESVCLDVPEYENDISPRV 587 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~----~g~i~--~~--~~~CLd~~~~~~~~g~~v 587 (605)
.|.++.+++-|++..... |..+.++.= .+..|+|++... .|-.+ .. ++.-||+.+..+.+|+.|
T Consensus 64 ~Iinv~sG~~L~~~~~~~-----~at~~q~sp---~~~~~rWrI~~~G~~~~G~f~I~nk~~s~~vldV~~~~t~~GAdV 135 (153)
T 2x2s_A 64 LIINVHSGYFLTATKENH-----IVSTPQISP---TDPSARWTIKPATTHQYEVFTINNKVSELGQLTVKDYSTHSGADV 135 (153)
T ss_dssp EEEETTTCCBCBCCSTTE-----ECEECCCCT---TCGGGCEEEEESCC--CCCEEEEESSGGGCEEEEGGGCCSTTCBE
T ss_pred EEEecCCccEEEecCCCC-----ceEEEEEcC---CCccceEEEEeccccCcceEEEecccCCCceEEeccCCCCCCceE
Confidence 477888999999876532 455666665 247899998621 23343 22 568999999999999999
Q ss_pred EEEeCCCCCCcceEeCC
Q psy10463 588 RILACSGFNRQRWTYDK 604 (605)
Q Consensus 588 ~l~~C~~~~~Q~W~~~~ 604 (605)
..|+-.+..||+|.|+.
T Consensus 136 i~~~~~~~dnQ~W~fda 152 (153)
T 2x2s_A 136 LSASAKTADNQKWYFDA 152 (153)
T ss_dssp EEECCCCCGGGCEEEEE
T ss_pred EEeecCCCccceeeccc
Confidence 99999998899999974
|
| >1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A | Back alignment and structure |
|---|
Probab=95.44 E-value=0.016 Score=53.43 Aligned_cols=80 Identities=20% Similarity=0.269 Sum_probs=53.7
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec-C--Cceeec-CCCeeeecCCCCCCCCCceEEE
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL-P--TDLIAT-DESVCLDVPEYENDISPRVRIL 590 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~-~--~g~i~~-~~~~CLd~~~~~~~~g~~v~l~ 590 (605)
=+|+|..++.||.+.. +| +...+| ......|.|.+.. . .-+|+. .++.||++....+.-...+.+.
T Consensus 110 VqFvN~~TgtCL~ay~-------nG--vv~~~C-~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~~s~~~~~~i~l~ 179 (206)
T 1sr4_A 110 FRFVNQSLGTCVEAYG-------NG--LIHDIC-SLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNPVSTTFYSTVTLS 179 (206)
T ss_dssp EEEEETTTCCEEEEET-------TE--EEEECC-CTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECSSCSSSCBCEEEE
T ss_pred EEEEECCCCceeeecc-------CC--eEEecC-CCCCcccEEEEecCCCccEEEEECCCCccCCccCCCCceeeeEEEe
Confidence 3778888999999842 12 588899 4434579998731 2 335774 5689999854322123578999
Q ss_pred eCCC---CC-CcceEeCC
Q psy10463 591 ACSG---FN-RQRWTYDK 604 (605)
Q Consensus 591 ~C~~---~~-~Q~W~~~~ 604 (605)
+|.. .+ .|+|.+..
T Consensus 180 ~C~d~~~~~l~QlW~itp 197 (206)
T 1sr4_A 180 VCDGATEPSRDQTWYLAP 197 (206)
T ss_dssp CCCCCEETTEECCEEEEC
T ss_pred ecCCCCCCCHHHCEEecc
Confidence 9952 23 89998753
|
| >1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* | Back alignment and structure |
|---|
Probab=94.50 E-value=0.05 Score=53.56 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=78.0
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 276 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN 276 (605)
...++|||-+|++. +.|.+.|..+.+ .+ .+.||+||=++............+ ...+.+|+++..+.|. + ..|=
T Consensus 27 ~~~FTvvi~ty~R~-~~L~~lv~~~~~-~~--~v~~IvVvWn~~~~~pp~~~~~~~-~~~~vpv~v~~~~~ns-L-nnRF 99 (293)
T 1omz_A 27 LDSFTLIMQTYNRT-DLLLRLLNHYQA-VP--SLHKVIVVWNNVGEKGPEELWNSL-GPHPIPVIFKPQTANK-M-RNRL 99 (293)
T ss_dssp TTCEEEEEEESSCH-HHHHHHHHHHTT-ST--TEEEEEEEECCTTCCCTHHHHHHT-CCCSSCEEEEECSSCC-G-GGGG
T ss_pred CCceEEEEEeeccc-HHHHHHHHHHhc-CC--CCCeEEEEeCCCCCCCChhhcccc-CCCCccEEEEeCCCCc-h-hhcc
Confidence 45799999999998 888888887643 22 347999997664321111111111 1113578998877652 2 2222
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEe
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~ 317 (605)
.-...-+.+.|+.+|+|+.++.+-|+-.....++.+..+||
T Consensus 100 ~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVG 140 (293)
T 1omz_A 100 QVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIG 140 (293)
T ss_dssp SCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEE
T ss_pred CCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceec
Confidence 23445689999999999999999999999999999887777
|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
Probab=94.33 E-value=0.22 Score=48.65 Aligned_cols=184 Identities=13% Similarity=0.133 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEe--CCCCCChHHHHHHHHhhc---cCCE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR--SPGRVGLIKARLLGARQA---EGEI 286 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~--~~~n~G~~~arN~G~~~A---~gd~ 286 (605)
+.+..+++.+.+.. . .+|+|+-+ ++ .+.++...++ ++++. .....|.++ ...+++.. ..++
T Consensus 44 Pmi~~~l~~l~~~~-i---~~IvV~t~---~~----~i~~~~~~~g--~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~ 109 (264)
T 3k8d_A 44 PMIVHVLERARESG-A---ERIIVATD---HE----DVARAVEAAG--GEVCMTRADHQSGTER-LAEVVEKCAFSDDTV 109 (264)
T ss_dssp EHHHHHHHHHHHTT-C---SEEEEEES---CH----HHHHHHHHTT--CEEEECCTTCCSHHHH-HHHHHHHHTCCTTCE
T ss_pred EHHHHHHHHHHhCC-C---CEEEEECC---HH----HHHHHHHHcC--CEEEEecCCCCCCHHH-HHHHHHHhccCCCCE
Confidence 35666777665432 2 48887754 22 2344455554 44443 444456544 23333332 5799
Q ss_pred EEEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeEeee------cCCeeEEecccccceeeeeccceeeEeecC-chhHh
Q psy10463 287 LVFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVIDII------SDVTFAYVRSFELHWGAFNWELHFRWYTYG-SSDAI 358 (605)
Q Consensus 287 i~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i~~i------~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~-~~~~~ 358 (605)
++++++|.. +++..++.+++.+.+....++......- +++........ . ..-+.|...+.+ .+...
T Consensus 110 vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~---~---g~~l~fsr~~ip~~r~~~ 183 (264)
T 3k8d_A 110 IVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDA---E---GYALYFSRATIPWDRDRF 183 (264)
T ss_dssp EEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECT---T---SBEEEEESSCCSCCHHHH
T ss_pred EEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECC---C---CeEEEEecCCCCCCCccc
Confidence 999999995 5899999999998765442222222111 11111110000 0 011112111111 11000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
....... + .+.....|..++++++++++-..++.. ..-.|.+|. +|+...|++|...
T Consensus 184 ~~~~~~~-~-~~~~~~~GiY~y~~~~l~~~~~~~~~~-lE~~e~leq-lr~le~G~~I~~~ 240 (264)
T 3k8d_A 184 AEGLETV-G-DNFLRHLGIYGYRAGFIRRYVNWQPSP-LEHIEMLEQ-LRVLWYGEKIHVA 240 (264)
T ss_dssp HHCSSCC-C-SCCEEECSEEEEEHHHHHHHHHSCCCH-HHHHHTCTT-HHHHHTTCCEEEE
T ss_pred ccccccc-C-CcceEEEEEEEECHHHHHHHHhCCCCh-hhhHHHHHH-HHHHHCCCceEEE
Confidence 0000000 0 012346689999999999875544332 111244444 6888999998775
|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
Probab=94.28 E-value=0.28 Score=47.64 Aligned_cols=188 Identities=15% Similarity=0.174 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc---cCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA---EGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A---~gd~i~ 288 (605)
+.+...++.+.... . .+|+|+-| ++ .+.++...++.++.+...+...|.++ ...|++.. ..+.++
T Consensus 35 Pli~~~l~~l~~~~-i---~~VvVvt~---~~----~i~~~~~~~g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vl 102 (256)
T 3tqd_A 35 PMIQHVYESAIKSG-A---EEVVIATD---DK----RIRQVAEDFGAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIV 102 (256)
T ss_dssp EHHHHHHHHHHHTT-C---SEEEEEES---CH----HHHHHHHHTTCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEE
T ss_pred hHHHHHHHHHHhCC-C---CEEEEECC---HH----HHHHHHHHcCCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEE
Confidence 35667777666532 2 47887754 12 23445555553333333344566655 33455554 578999
Q ss_pred EecCCcc-cCcChHHHHHHHHHcCCc-EEEeeeEee------ecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 289 FLDAHCE-CTLGWLENLVARVAEDRT-RVVCPVIDI------ISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 289 flD~D~~-~~~~~L~~ll~~~~~~~~-~vv~p~i~~------i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
++++|.. +++..++.+++.+.+++. .+++..... .+++.+...-.. .| ..+.|...+.+...-...
T Consensus 103 v~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~---~g---~~l~fsr~pip~~r~~~~ 176 (256)
T 3tqd_A 103 CLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNR---RN---YALYFSHAPIPWGRDTFS 176 (256)
T ss_dssp EECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECT---TS---BEEEEESSCSSCCTTTTT
T ss_pred EEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECC---CC---EEeEEecCCCCCCCcccc
Confidence 9999995 588999999999876432 222222211 122211100000 00 111121111110000000
Q ss_pred -ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEec
Q psy10463 361 -RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 361 -~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
......+ .+.....|..++++++++++-...+...- -.|.+|. +|+...|++|....
T Consensus 177 ~~~~~~~~-~~~~~~~GiY~y~~~~l~~~~~l~~s~lE-~~e~leq-lr~le~G~~i~~~~ 234 (256)
T 3tqd_A 177 DKENLQLN-GSHYRHVGIYAYRVGFLEEYLSWDACPAE-KMEALEQ-LRILWHGGRIHMVV 234 (256)
T ss_dssp CGGGCCCS-SCCEEEEEEEEEEHHHHHHHHHSCCCHHH-HHHTCTT-HHHHHTTCCCEEEE
T ss_pred cccccccC-CcceEEEEEEEcCHHHHHHHHhCCCCccc-chhhhHH-HHHHHCCCeEEEEE
Confidence 0000000 01234568999999999988655433210 1233342 68889999987754
|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
Probab=92.62 E-value=0.56 Score=45.22 Aligned_cols=89 Identities=8% Similarity=0.100 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc---cCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA---EGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A---~gd~i~ 288 (605)
+.+...++.+.... . .+|+|+-+. + .+.++...++.++.+...+...|.+++.. +++.. ..+.++
T Consensus 28 Pli~~~l~~l~~~~-~---~~ivVv~~~---~----~i~~~~~~~g~~v~~~~~~~~~Gt~~~~~-~~~~l~~~~~d~vl 95 (252)
T 3oam_A 28 PMIQWVYEQAMQAG-A---DRVIIATDD---E----RVEQAVQAFGGVVCMTSPNHQSGTERLAE-VVAKMAIPADHIVV 95 (252)
T ss_dssp EHHHHHHHHHHHTT-C---SEEEEEESC---H----HHHHHHHHTTCEEEECCTTCCSHHHHHHH-HHHHTTCCTTSEEE
T ss_pred EHHHHHHHHHHhCC-C---CeEEEECCH---H----HHHHHHHHcCCEEEEcCCCCCCcHHHHHH-HHHhcCcCCCCEEE
Confidence 46777777766543 2 477777541 2 24445555543343333445567666443 34433 578999
Q ss_pred EecCCcc-cCcChHHHHHHHHHcCC
Q psy10463 289 FLDAHCE-CTLGWLENLVARVAEDR 312 (605)
Q Consensus 289 flD~D~~-~~~~~L~~ll~~~~~~~ 312 (605)
++++|.. +++..++.+++.+.++.
T Consensus 96 v~~gD~Pli~~~~i~~l~~~~~~~~ 120 (252)
T 3oam_A 96 NVQGDEPLIPPAIIRQVADNLAACS 120 (252)
T ss_dssp ECCTTCTTCCHHHHHHHHHHHHHSS
T ss_pred EEeCCeeecCHHHHHHHHHHHHhcC
Confidence 9999995 68999999999987654
|
| >2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.52 E-value=1.2 Score=42.39 Aligned_cols=99 Identities=18% Similarity=0.284 Sum_probs=62.7
Q ss_pred CCcceEEEEeechhhH--HHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC------
Q psy10463 197 LPKSSIVIVFHNEAWS--ALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR------ 268 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~--~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n------ 268 (605)
+|.+=||-|||.+... .|.+.-+.+ ..-+ . .--|||+|+..... .+.++.++.+...+++..+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~Vp-~--l~WIVVEd~~~~~~---~v~~lL~~sgl~y~HL~~~~~~~~~~~ 74 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTF-RQVA-Q--LHWILVEDAAARSE---LVSRFLARAGLPSTHLHVPTPRRYKRP 74 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHH-TTST-T--EEEEEEESSSSCCH---HHHHHHHHSCSCEEEEECCCCCC----
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHH-hcCC-c--eEEEEEcCCCCCCH---HHHHHHHHcCCceEEEecCCccccCCC
Confidence 6888999999998722 333433333 3343 3 47789998764321 244566666655655544321
Q ss_pred ---CChHHHHHHHHhhc---------cCCEEEEecCCcccCcChHHH
Q psy10463 269 ---VGLIKARLLGARQA---------EGEILVFLDAHCECTLGWLEN 303 (605)
Q Consensus 269 ---~G~~~arN~G~~~A---------~gd~i~flD~D~~~~~~~L~~ 303 (605)
.| ...||.|++.- ..-+|.|.|+|...+-..+++
T Consensus 75 ~~prg-~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~e 120 (246)
T 2d0j_A 75 GLPRA-TEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQE 120 (246)
T ss_dssp CCCCC-HHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHH
T ss_pred CCcch-HHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHH
Confidence 22 37799998543 246899999999887766655
|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
Probab=92.01 E-value=4 Score=39.39 Aligned_cols=93 Identities=9% Similarity=0.084 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHH---HCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVA---KLSVPTRVIRSPGRVGLIKARLLGARQAEGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~---~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~ 288 (605)
+.+..+|+.+.+.. . .+|+||-+......+ .++.. .++..+.++..+...|.+.+...|+.....+.++
T Consensus 56 pli~~~l~~l~~~g-~---~~iivv~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~l 127 (269)
T 4ecm_A 56 PMIYHAVYKLKQCD-I---TDIMIITGKEHMGDV----VSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMV 127 (269)
T ss_dssp EHHHHHHHHHHHTT-C---CEEEEEECTTTHHHH----HHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEE
T ss_pred EHHHHHHHHHHHCC-C---CEEEEECChhhHHHH----HHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEE
Confidence 57777888777643 1 477777543322222 23332 2333567777777789999888888777678999
Q ss_pred EecCCcccCcChHHHHHHHHHcCCc
Q psy10463 289 FLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 289 flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
++.+|..+. .-+..+++...+...
T Consensus 128 v~~~D~~~~-~~l~~l~~~~~~~~~ 151 (269)
T 4ecm_A 128 VILGDNIFS-DDIRPYVEEFTNQKE 151 (269)
T ss_dssp EEETTEEES-SCSHHHHHHHHTSSS
T ss_pred EEeCCccCc-cCHHHHHHHHHhcCC
Confidence 999999776 667888888766443
|
| >1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A | Back alignment and structure |
|---|
Probab=91.28 E-value=0.21 Score=46.03 Aligned_cols=60 Identities=10% Similarity=0.065 Sum_probs=42.4
Q ss_pred CCCCCeEEeecCCCC-------------CcceEEEEe--cCCceee---cCCCeeeecCCCCCCCCCceEEEeCCCCC-C
Q psy10463 537 QASGPASLLPCTHLP-------------VLTQMFVMK--LPTDLIA---TDESVCLDVPEYENDISPRVRILACSGFN-R 597 (605)
Q Consensus 537 ~~g~~v~l~~C~~~~-------------~~nQ~w~~~--~~~g~i~---~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~ 597 (605)
.+|+.+.+|.|+.+. ++.+.|.+. ...|.++ ..++.||.+.. ..+...+|+.++ .
T Consensus 66 ~ng~~lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~------nGvv~~~C~~s~~~ 139 (206)
T 1sr4_A 66 QNGALLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYG------NGLIHDICSLDKLA 139 (206)
T ss_dssp TTSEEEEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEET------TEEEEECCCTTCGG
T ss_pred CCCCEEEEEecCCCcceeeecccccCCcCCcceeEEEeecCCCEEEEEECCCCceeeecc------CCeEEecCCCCCcc
Confidence 457889999993222 457778765 2456443 24689999854 137999999877 8
Q ss_pred cceEe
Q psy10463 598 QRWTY 602 (605)
Q Consensus 598 Q~W~~ 602 (605)
|.|.+
T Consensus 140 Q~wsi 144 (206)
T 1sr4_A 140 QEFEL 144 (206)
T ss_dssp GCEEE
T ss_pred cEEEE
Confidence 99986
|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
Probab=90.55 E-value=2.1 Score=41.31 Aligned_cols=89 Identities=13% Similarity=0.139 Sum_probs=55.0
Q ss_pred HHHHHHH-HHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc---cCCEE
Q psy10463 212 SALLRTV-HSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA---EGEIL 287 (605)
Q Consensus 212 ~~l~~~l-~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A---~gd~i 287 (605)
+.+..++ +.+.+. . ..+|+|+-+. + .+.++...++.++.+.......|.. +...|++.. ..+++
T Consensus 27 Pli~~~i~~~~~~~-~---~~~vvVvt~~---~----~i~~~~~~~g~~v~~~~~~~~~Gt~-~i~~a~~~~~~~~~d~v 94 (253)
T 4fcu_A 27 PMILRVVDQAKKVE-G---FDDLCVATDD---E----RIAEICRAEGVDVVLTSADHPSGTD-RLSEVARIKGWDADDII 94 (253)
T ss_dssp EHHHHHHHHHHTCT-T---CCEEEEEESC---H----HHHHHHHTTTCCEEECCTTCCCHHH-HHHHHHHHHTCCTTCEE
T ss_pred EhHHHHHHHHHHhc-C---CCEEEEECCH---H----HHHHHHHHcCCeEEEeCCCCCChHH-HHHHHHHhcCcCCCCEE
Confidence 4677777 666542 2 2488887642 2 2344555555344333333444543 334455544 45899
Q ss_pred EEecCCcc-cCcChHHHHHHHHHcCC
Q psy10463 288 VFLDAHCE-CTLGWLENLVARVAEDR 312 (605)
Q Consensus 288 ~flD~D~~-~~~~~L~~ll~~~~~~~ 312 (605)
+++++|.- +++..++.+++.+.+++
T Consensus 95 lv~~gD~Pli~~~~i~~li~~~~~~~ 120 (253)
T 4fcu_A 95 VNVQGDEPLLPAQLVQQVAKLLVDKP 120 (253)
T ss_dssp EECCTTCTTCCHHHHHHHHHHHHHCT
T ss_pred EEEeCCcccCCHHHHHHHHHHHHhCC
Confidence 99999995 58899999999987763
|
| >3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* | Back alignment and structure |
|---|
Probab=90.43 E-value=1.3 Score=42.78 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=58.7
Q ss_pred cCCcceEEEEeechhhH--HHHHHHHHHHhcCCCCCceeEEEeeCCCC-hHHHHHHHHHHHHHCCCCEEEEeCCCCCCh-
Q psy10463 196 FLPKSSIVIVFHNEAWS--ALLRTVHSVISRSPRSMLKEILLVDDAST-REFLKSSLDEYVAKLSVPTRVIRSPGRVGL- 271 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~--~l~~~l~sl~~q~~~~~~~eIIvVDd~S~-d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~- 271 (605)
.+|.|=||.|||.+... .|.+.-+. +..-+ . .--|||+|+.. .+. +.++.++.+...+.+..+.+.++
T Consensus 19 ~~p~IivVTPTy~R~~Q~a~LtRLa~T-L~~Vp-~--L~WIVVEd~~~~t~~----va~lL~rsGl~y~HL~~~~p~~~~ 90 (281)
T 3cu0_A 19 SHMTIYVVTPTYARLVQKAELVRLSQT-LSLVP-R--LHWLLVEDAEGPTPL----VSGLLAASGLLFTHLVVLTPKAQR 90 (281)
T ss_dssp --CEEEEEEEECCSTTHHHHHHHHHHH-HTTSS-S--EEEEEEESSSSCCHH----HHHHHHHHCSEEEEEECCCC----
T ss_pred CCCeEEEEeCCCCCcchhHHHHHHHHH-HhcCC-c--eEEEEEcCCCCCCHH----HHHHHHHcCCceEEeccCCCcccc
Confidence 47889999999998722 23333333 33344 3 57889998643 332 33444544434455544432221
Q ss_pred -------------HHHHHHHHhhcc-----------------CCEEEEecCCcccCcChHHH
Q psy10463 272 -------------IKARLLGARQAE-----------------GEILVFLDAHCECTLGWLEN 303 (605)
Q Consensus 272 -------------~~arN~G~~~A~-----------------gd~i~flD~D~~~~~~~L~~ 303 (605)
...||.|++.-+ .-+|.|.|+|...+-..+++
T Consensus 91 ~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFde 152 (281)
T 3cu0_A 91 LREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEE 152 (281)
T ss_dssp -------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHH
T ss_pred ccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHH
Confidence 456999985544 35889999998877655554
|
| >1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* | Back alignment and structure |
|---|
Probab=88.59 E-value=1.5 Score=41.80 Aligned_cols=111 Identities=19% Similarity=0.222 Sum_probs=65.8
Q ss_pred CCcceEEEEeechhh--HHHHHHHHHHHhcCCCCCceeEEEeeCCCC-hHHHHHHHHHHHHHCCCCEEEEeCCCC-----
Q psy10463 197 LPKSSIVIVFHNEAW--SALLRTVHSVISRSPRSMLKEILLVDDAST-REFLKSSLDEYVAKLSVPTRVIRSPGR----- 268 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~--~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~-d~~~~~~l~~~~~~~~~~v~~i~~~~n----- 268 (605)
+|.+=||-|||.+.. ..|.+..+.+ ...+ + .--|||+|+.. .+. +.++.++.+...+++..+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~Vp-~--L~WIVVEd~~~~t~~----va~lL~~sgl~y~HL~~~~p~~~~~ 73 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LHVP-N--LHWLVVEDAPRRTPL----TARLLRDTGLNYTHLHVETPRNYKL 73 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TTSS-S--EEEEEEESSSSCCHH----HHHHHHHHCCEEEEEECCCCHHHHC
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-ccCC-c--eEEEEEeCCCCCCHH----HHHHHHHcCCceEEeecCCCccccc
Confidence 688899999999872 2344444444 3333 4 57889998653 332 33444554434444443321
Q ss_pred ---------CChHHHHHHHHhhcc---------CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeee
Q psy10463 269 ---------VGLIKARLLGARQAE---------GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPV 319 (605)
Q Consensus 269 ---------~G~~~arN~G~~~A~---------gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~ 319 (605)
.--...||.|++.-+ .-+|.|.|+|...+-..+++ +..-....+-|+
T Consensus 74 ~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~e----mR~i~~vgvWPV 138 (253)
T 1v84_A 74 RGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEE----MRSTRRVSVWPV 138 (253)
T ss_dssp C-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHH----HHTCSSEEECCE
T ss_pred cccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHH----HhccCeeEEEEE
Confidence 012356999986542 46899999998877655555 445444444444
|
| >3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=87.61 E-value=1.7 Score=42.11 Aligned_cols=71 Identities=15% Similarity=0.217 Sum_probs=50.3
Q ss_pred CcEEEEEEeecCchHHHHHHHH---HHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVH---SVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~---sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
-++.||||+.|.+ +.|..-|. -+|++.. +.+.|+||+..-.. ....+..
T Consensus 51 ~kvAIIIPyRdR~-~hL~~fl~~lhp~L~rQ~--l~y~I~VieQ~~~~-------------------------~FNRa~L 102 (287)
T 3lw6_A 51 HKMALLVPFRDRF-EELLQFVPHMTAFLKRQG--VAHHIFVLNQVDRF-------------------------RFNRASL 102 (287)
T ss_dssp CEEEEEEEESSCH-HHHHHHHHHHHHHHHHTT--CEEEEEEEEECSSS-------------------------CCCHHHH
T ss_pred ceEEEEEEeCCHH-HHHHHHHHHHHHHHHHcC--CceEEEEEecCCCC-------------------------ccchhhe
Confidence 4799999999998 77766654 4444432 33678887774221 2456778
Q ss_pred HHHHhhhcc--CceEEEecCcccc
Q psy10463 167 RLLGARQAE--GEILVFLDAHCEC 188 (605)
Q Consensus 167 ~n~g~~~a~--g~~i~~lD~d~~~ 188 (605)
.|.|...|. .++++|-|.|..+
T Consensus 103 lNvGf~ea~~~~d~~ifHDVDLlP 126 (287)
T 3lw6_A 103 INVGFQFASDVYDYIAMHDVDLLP 126 (287)
T ss_dssp HHHHHHHSCTTCCEEEEECTTEEE
T ss_pred ecccHHHHhccCCEEEEecccccc
Confidence 899999885 6899999988744
|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
Probab=86.95 E-value=5.4 Score=38.66 Aligned_cols=55 Identities=18% Similarity=0.113 Sum_probs=44.4
Q ss_pred CEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcC----hHHHHHHHHHcCCc
Q psy10463 259 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLG----WLENLVARVAEDRT 313 (605)
Q Consensus 259 ~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~----~L~~ll~~~~~~~~ 313 (605)
.+.++..+...|.+.|...|+.....+.++++.+|..+.++ .+..+++...+...
T Consensus 96 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 96 CFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred cEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 57778877888999998888877766788889999988887 79999998765443
|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
Probab=86.15 E-value=17 Score=37.72 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc-CCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE-GEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~-gd~i~fl 290 (605)
+.+..+++.+.+.. . .+|+||-... .+. +.++.... .++++..+...|.+.+.-.|++... .+.++++
T Consensus 37 pli~~~l~~l~~~~-~---~~i~vv~~~~-~~~----i~~~~~~~--~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~ 105 (459)
T 4fce_A 37 PMVQHVIDAAMKLG-A---QHVHLVYGHG-GEL----LKKTLADP--SLNWVLQAEQLGTGHAMQQAAPHFADDEDILML 105 (459)
T ss_dssp EHHHHHHHHHHHHT-C---SCEEEEESSC-HHH----HHHHC-------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEE
T ss_pred eHHHHHHHHHHhCC-C---CcEEEEeCCC-HHH----HHHHhccC--CcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEE
Confidence 56777777776653 2 3777765332 222 33333332 4677777778899888888888776 4899999
Q ss_pred cCCcc-cCcChHHHHHHHHHcC
Q psy10463 291 DAHCE-CTLGWLENLVARVAED 311 (605)
Q Consensus 291 D~D~~-~~~~~L~~ll~~~~~~ 311 (605)
++|.. +.+..++.+++...+.
T Consensus 106 ~~D~P~i~~~~i~~l~~~~~~~ 127 (459)
T 4fce_A 106 YGDVPLISVDTLQRLLAAKPEG 127 (459)
T ss_dssp ETTCTTCCHHHHHHHHHHCCTT
T ss_pred eCCcccCCHHHHHHHHHHHhhC
Confidence 99994 6888999999887653
|
| >2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} | Back alignment and structure |
|---|
Probab=85.30 E-value=26 Score=34.15 Aligned_cols=55 Identities=16% Similarity=0.036 Sum_probs=42.9
Q ss_pred CEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccC----cC---hHHHHHHHHHcCCc
Q psy10463 259 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECT----LG---WLENLVARVAEDRT 313 (605)
Q Consensus 259 ~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~----~~---~L~~ll~~~~~~~~ 313 (605)
++.++..+...|.+.|.-.++.....+.++++.+|..+. +. .+..+++...+...
T Consensus 103 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 103 TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred ceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 466777777889999988888776567888999999886 45 79999988765443
|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
Probab=85.03 E-value=5.7 Score=42.28 Aligned_cols=105 Identities=14% Similarity=0.153 Sum_probs=71.0
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|..|.+ .|...|+.+.+... .+|+||-. ...+.+++.+.++...++.+++++.+++..|-+.|...+...-
T Consensus 34 l~pv~gkp--~i~~~l~~~~~~g~----~~i~vv~~-~~~~~i~~~~~~~~~~~~~~i~~~~q~~~lGTa~Av~~a~~~l 106 (501)
T 3st8_A 34 LHTLAGRS--MLSHVLHAIAKLAP----QRLIVVLG-HDHQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSAL 106 (501)
T ss_dssp GCEETTEE--HHHHHHHHHHHHCC----SEEEEEEC-TTHHHHHHHHHHHHHHHTSCCEEEECSSCCCHHHHHHHHHTTS
T ss_pred HeEECChh--HHHHHHHHHHhCCC----CEEEEEeC-CCHHHHHHHHHHHHHhcCCcEEEEEcCCCCCcHHHHHHHHHHh
Confidence 35666664 66677777666543 37777753 3334455556555556666899999999999999988887765
Q ss_pred cC---CEEEEecCCc-ccCcChHHHHHHHHHcCCcE
Q psy10463 283 EG---EILVFLDAHC-ECTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 283 ~g---d~i~flD~D~-~~~~~~L~~ll~~~~~~~~~ 314 (605)
.. +.++++..|+ .+..+.+..|++........
T Consensus 107 ~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~ 142 (501)
T 3st8_A 107 PDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAA 142 (501)
T ss_dssp CTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCS
T ss_pred ccccccceeeecCcceeecHHHHHHHHHHHhhcccc
Confidence 43 3455555555 56788899999987765543
|
| >3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
Probab=82.08 E-value=12 Score=36.21 Aligned_cols=107 Identities=14% Similarity=0.181 Sum_probs=66.2
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCC--C----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRV--G---- 270 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~--G---- 270 (605)
++.+.|++.+-+.-...+.-++.|++..+... ...+.|+.++-+++. .+.++++.+.++..++++.-+... +
T Consensus 3 ~m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~-~~~~~il~~~is~~~-~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (276)
T 3tzt_A 3 AMADALLLTLDENYIPQMKVLMTSIYINNPGR-IFDVYLIHSRISEDK-LKDLGEDLKKFSYTLYPIRATDDLFSFAKVT 80 (276)
T ss_dssp --CEEEEEECCGGGHHHHHHHHHHHHHHSTTC-CEEEEEEESCCCHHH-HHHHHHHHHTTTCEEEEEECC----------
T ss_pred ceeEEEEEEeCHhHHHHHHHHHHHHHHhCCCC-ceEEEEEeCCCCHHH-HHHHHHHHHHcCCEEEEEEeCHHHHhcCccc
Confidence 46677887775555578899999999887642 267777777766653 446777777666567777654311 1
Q ss_pred -----hHHHHHHHHhhc--cCCEEEEecCCcccCcChHHHHHH
Q psy10463 271 -----LIKARLLGARQA--EGEILVFLDAHCECTLGWLENLVA 306 (605)
Q Consensus 271 -----~~~arN~G~~~A--~gd~i~flD~D~~~~~~~L~~ll~ 306 (605)
..-+|-.....- .-+-+++||+|+.+..+. .+|.+
T Consensus 81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di-~~L~~ 122 (276)
T 3tzt_A 81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPL-DDLLR 122 (276)
T ss_dssp ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCS-HHHHT
T ss_pred cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCH-HHHhh
Confidence 111222222232 368999999999886554 55554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 605 | ||||
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 4e-86 | |
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 5e-23 | |
| d2bo4a1 | 381 | c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG | 3e-20 | |
| d2bo4a1 | 381 | c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG | 1e-09 | |
| d1omza_ | 265 | c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransf | 2e-08 | |
| d1vcla1 | 150 | b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domai | 2e-05 | |
| d1xhba1 | 131 | b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosa | 3e-04 | |
| d1qg8a_ | 255 | c.68.1.1 (A:) Spore coat polysaccharide biosynthes | 6e-04 | |
| d1qg8a_ | 255 | c.68.1.1 (A:) Spore coat polysaccharide biosynthes | 0.003 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 269 bits (688), Expect = 4e-86
Identities = 176/319 (55%), Positives = 228/319 (71%), Gaps = 1/319 (0%)
Query: 185 HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREF 244
C + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR M++EI+LVDDAS R+F
Sbjct: 9 LEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF 68
Query: 245 LKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENL 304
LK L+ YV KL VP VIR R GLI+ARL GA + G+++ FLDAHCECT GWLE L
Sbjct: 69 LKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPL 128
Query: 305 VARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDF 364
+AR+ DR VVCP+ID+ISD TF Y+ ++ +G FNW+L+FRWY + ++ D
Sbjct: 129 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDR 188
Query: 365 TEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHV 424
T P +TP MAGGLF+IDR YF IG YD M +WGGENLE+SFR+WQCGG++EI CSHV
Sbjct: 189 TLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHV 248
Query: 425 AHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLE 484
H+FRKA+PY+FPGG +++ N R+A VWMDE+ F++ +P K D + SRL
Sbjct: 249 GHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTK-VDYGDISSRLG 307
Query: 485 LRKQLKCHSFKWYLTHVWP 503
LR++L+C F WYL +++P
Sbjct: 308 LRRKLQCKPFSWYLENIYP 326
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 98.1 bits (243), Expect = 5e-23
Identities = 79/121 (65%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 68 NRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILL 127
NR+LPDVR CKTKV+ + LP +S+VIVFHNEAWS LLRTVHSVI+RSPR M++EI+L
Sbjct: 1 NRSLPDVRLEGCKTKVYPDN-LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVL 59
Query: 128 VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCE 187
VDDAS R+FLK L+ YV KL VP VIR R GLI+ARL GA + G+++ FLDAHCE
Sbjct: 60 VDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCE 119
Query: 188 C 188
C
Sbjct: 120 C 120
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Score = 90.8 bits (225), Expect = 3e-20
Identities = 34/353 (9%), Positives = 68/353 (19%), Gaps = 79/353 (22%)
Query: 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLK---------SSLD 250
S +V F +E LL V V + PR + E+L + + + +
Sbjct: 1 SLVVFPFKHEHPEVLLHNV-RVAAAHPR--VHEVLCIGYERDQTYEAVERAAPEISRATG 57
Query: 251 EYVAKLSVPTRVIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVA 309
V+ PG+ G+ A + + E + F DA A
Sbjct: 58 TPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAA 117
Query: 310 EDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFK 369
+ +V W + + + +
Sbjct: 118 DFGYGLVRH------------YFPRASTDAMITWMITRTGFAL------LWPHTELSWIE 159
Query: 370 TPAMAGGLFAIDRAYFFHI-------GAYDEEMQVW-----------------GGENLEM 405
P GG + R + D +
Sbjct: 160 QP--LGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHR 217
Query: 406 SFR---------------VWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVLYGNLAR 450
+ + + P H P V
Sbjct: 218 LYGGLDDLRTMLVECFAAIQSLQHEVVGQPAIHRQ-EHPHRVPVHIAERV-GYDVEATLH 275
Query: 451 VALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWP 503
+ + ++ +R+ +
Sbjct: 276 RLMQHWTPRQVELLELFTTP----VREGLRTCQRRPA-FNFMDEMAWAATYHV 323
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Score = 58.1 bits (140), Expect = 1e-09
Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLK---------SSLD 142
S +V F +E LL V V + PR + E+L + + + +
Sbjct: 1 SLVVFPFKHEHPEVLLHNV-RVAAAHPR--VHEVLCIGYERDQTYEAVERAAPEISRATG 57
Query: 143 EYVAKLSVPTRVIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPK 199
V+ PG+ G+ A + + E + F DA F +++ K
Sbjct: 58 TPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITS---FGPDWITK 112
|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Exostosin domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 53.5 bits (127), Expect = 2e-08
Identities = 22/182 (12%), Positives = 54/182 (29%), Gaps = 7/182 (3%)
Query: 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL 256
L ++++ +N LLR ++ + L ++++V + + + +
Sbjct: 2 LDSFTLIMQTYNRTDL-LLRLLNHYQAVPS---LHKVIVVWNNVGEKGPEELWNSLGPH- 56
Query: 257 SVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVV 316
P VI P ++ RL + E ++ +D + L + + +++
Sbjct: 57 --PIPVIFKPQTANKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQII 114
Query: 317 CPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGG 376
V + ++ + K K PA
Sbjct: 115 GFVPRKHVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHA 174
Query: 377 LF 378
L
Sbjct: 175 LI 176
|
| >d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} Length = 150 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Score = 43.0 bits (100), Expect = 2e-05
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVC 573
G +R ++ +CV+ NQ SG + C L Q ++ + + C
Sbjct: 10 IGELRSFKSKQCVDIV-----GNQGSGNIATYDCDGLS--DQQIIICGDGTIRNEARNYC 62
Query: 574 LDVPEYEN-DISPRVRILACSGFNRQRWTYDK 604
N ++ L + QRW +
Sbjct: 63 FTPDGSGNANVMSSPCTLYPEIPSSQRWRQGR 94
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.7 bits (89), Expect = 3e-04
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 11/98 (11%)
Query: 507 LPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLI 566
+P G IR+V+T++C++ K + + C + V +
Sbjct: 2 IPRHYFSLGEIRNVETNQCLDNMARK-----ENEKVGIFNCHG---MGGNQVFSYTANKE 53
Query: 567 ATDESVCLDVPEYENDISPRVRILACSGFNRQRWTYDK 604
+ +CLDV P + Q W YD
Sbjct: 54 IRTDDLCLDVS---KLNGPVTMLKCHHLKGNQLWEYDP 88
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Score = 39.7 bits (91), Expect = 6e-04
Identities = 26/216 (12%), Positives = 65/216 (30%), Gaps = 15/216 (6%)
Query: 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS 257
PK S+++ +N++ + +++ S++S++ E+ ++DD S E L + ++
Sbjct: 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSDF--ELFIMDDNSNEETLN-VIRPFLNDNR 56
Query: 258 VPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317
V G + A + + + T + DR +
Sbjct: 57 VRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYM------PDRLLKMV 110
Query: 318 PVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGL 377
+D + Y S H + + ++
Sbjct: 111 RELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVT-----WNAPCAIDHCSVMHRY 165
Query: 378 FAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCG 413
+++ +DE + + +RV
Sbjct: 166 SVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY 201
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Score = 37.4 bits (85), Expect = 0.003
Identities = 10/44 (22%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST 133
PK S+++ +N++ + +++ S++S++ E+ ++DD S
Sbjct: 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSDF--ELFIMDDNSN 41
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 605 | |||
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 100.0 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.92 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 99.81 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.73 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 99.66 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.57 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 99.57 | |
| d1knma_ | 129 | Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas | 99.5 | |
| d1xhba1 | 131 | Polypeptide N-acetylgalactosaminyltransferase 1, C | 99.47 | |
| d1vcla2 | 133 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 99.43 | |
| d1ggpb1 | 126 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.26 | |
| d1vcla1 | 150 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 99.17 | |
| d1dqga_ | 134 | Mannose receptor {Mouse (Mus musculus) [TaxId: 100 | 99.15 | |
| d1knma_ | 129 | Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas | 99.13 | |
| d1pzta_ | 271 | beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos | 99.13 | |
| d1m2tb2 | 126 | Plant cytotoxin B-chain (lectin) {European mistlet | 99.12 | |
| d1xhba1 | 131 | Polypeptide N-acetylgalactosaminyltransferase 1, C | 99.09 | |
| d2aaib2 | 127 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 99.05 | |
| d1abrb2 | 127 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 99.05 | |
| d1ggpb2 | 128 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.05 | |
| d2zqna1 | 130 | 29-kDa galactose-binding lectin {Lumbricus terrest | 99.04 | |
| d2zqna1 | 130 | 29-kDa galactose-binding lectin {Lumbricus terrest | 99.04 | |
| d1ggpb2 | 128 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.03 | |
| d1rzob1 | 135 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 99.03 | |
| d1vcla2 | 133 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 99.03 | |
| d1m2tb2 | 126 | Plant cytotoxin B-chain (lectin) {European mistlet | 99.02 | |
| d1hwmb2 | 131 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 99.02 | |
| d2aaib2 | 127 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 99.02 | |
| d1hwmb1 | 133 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 99.0 | |
| d1ggpb1 | 126 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.0 | |
| d1m2tb1 | 136 | Plant cytotoxin B-chain (lectin) {European mistlet | 98.99 | |
| d1abrb1 | 140 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 98.98 | |
| d1abrb2 | 127 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 98.97 | |
| d1vcla1 | 150 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 98.91 | |
| d1hwmb2 | 131 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 98.9 | |
| d1m2tb1 | 136 | Plant cytotoxin B-chain (lectin) {European mistlet | 98.89 | |
| d1abrb1 | 140 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 98.86 | |
| d1rzob1 | 135 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 98.86 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 98.83 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 98.8 | |
| d1sr4a_ | 167 | Cytolethal distending toxin subunit A {Haemophilus | 98.8 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 98.78 | |
| d1hwmb1 | 133 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 98.77 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 98.72 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 98.52 | |
| d1fo8a_ | 343 | N-acetylglucosaminyltransferase I {Rabbit (Oryctol | 98.35 | |
| d1dqga_ | 134 | Mannose receptor {Mouse (Mus musculus) [TaxId: 100 | 98.17 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 98.13 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 98.11 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 97.83 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 97.44 | |
| d1sr4a_ | 167 | Cytolethal distending toxin subunit A {Haemophilus | 97.14 | |
| d1fo8a_ | 343 | N-acetylglucosaminyltransferase I {Rabbit (Oryctol | 95.78 | |
| d1pzta_ | 271 | beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos | 91.34 | |
| d1v82a_ | 252 | Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human ( | 90.03 | |
| d1h7ea_ | 245 | CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn | 86.71 | |
| d3cu0a1 | 261 | 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo | 83.07 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-62 Score=508.01 Aligned_cols=328 Identities=57% Similarity=1.090 Sum_probs=282.9
Q ss_pred CCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHh
Q psy10463 68 NRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK 147 (605)
Q Consensus 68 ~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~ 147 (605)
+|++||.|++.|++..|+ +.+|.||||||+||+++++|.+||+||++|+++...
T Consensus 1 ~~~~~~~r~~~~~~~~~~-~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~------------------------- 54 (328)
T d1xhba2 1 NRSLPDVRLEGCKTKVYP-DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMI------------------------- 54 (328)
T ss_dssp CCCCCCCSCGGGGTCCCC-SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGE-------------------------
T ss_pred CCCCCCCCChhhhhccCC-CCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCC-------------------------
Confidence 589999999999999999 899999999999998756677777777777765543
Q ss_pred cCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCC
Q psy10463 148 LSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPR 227 (605)
Q Consensus 148 ~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~ 227 (605)
T Consensus 55 -------------------------------------------------------------------------------- 54 (328)
T d1xhba2 55 -------------------------------------------------------------------------------- 54 (328)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHH
Q psy10463 228 SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 228 ~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
.|||||||||+|+++++.++++.++.+.++++++++.|.|+++|+|.|+++|+||||+|||+|+++.|+||+.+++.
T Consensus 55 ---~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n~G~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~ 131 (328)
T d1xhba2 55 ---EEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLAR 131 (328)
T ss_dssp ---EEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHH
T ss_pred ---eEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecccccchHHHHHHHHhhhcceeeecCcccccChhHHHHHHHH
Confidence 35555555555554545566676766668999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhH
Q psy10463 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFH 387 (605)
Q Consensus 308 ~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~ 387 (605)
+.+++..+++|.++.++..++.+..+.....+++.|.+.+.+...+.............+..++.+.|++++++|++|++
T Consensus 132 ~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~ 211 (328)
T d1xhba2 132 IKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQE 211 (328)
T ss_dssp HHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHH
T ss_pred HhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHHHHH
Confidence 99999999999999999999998888877789999999999998888777766666777888899999999999999999
Q ss_pred hCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhhhhhHHHHHHHHhhhhHhhhhccC
Q psy10463 388 IGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVLYGNLARVALVWMDEWAEFYFKFN 467 (605)
Q Consensus 388 iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~~rn~~r~a~~W~d~~k~~~~~~~ 467 (605)
+|||||.+.+||+||+|||+|++++|+++.++|+++|+|.++.+.++..+.+......+|..|++++||++||+++|..+
T Consensus 212 vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~N~~r~~e~wl~~yk~~~~~~~ 291 (328)
T d1xhba2 212 IGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIIS 291 (328)
T ss_dssp TTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTS
T ss_pred hCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEEeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999998888777788999999999999999999999999
Q ss_pred chhhccCCccchHHHHHHhhhcCCcccccccccccCCC
Q psy10463 468 PEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHH 505 (605)
Q Consensus 468 p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~ 505 (605)
| ......+|++++|++||++|+||+|+|||++|||+.
T Consensus 292 ~-~~~~~~~~~i~~r~~Lr~~l~ck~f~w~~~~~~~~~ 328 (328)
T d1xhba2 292 P-GVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDS 328 (328)
T ss_dssp T-TGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTCTTC
T ss_pred c-ccccCCcccHHHHHHHHHHhCCCChHHHHhhCCCCC
Confidence 9 677789999999999999999999999999999983
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=9.3e-25 Score=214.95 Aligned_cols=200 Identities=13% Similarity=0.113 Sum_probs=144.7
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC--------CCC
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP--------GRV 269 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~--------~n~ 269 (605)
|+||||||+||++ ..|.+||.|+++||+++ +|||||||||+|++. +.++++.+. + ++++++.+ .+.
T Consensus 1 P~vSiiip~yN~~-~~l~~~l~Si~~Qt~~~--~eiivvdd~S~d~t~-~~l~~~~~~-~-~i~~~~~~~~~~~~~~~~~ 74 (255)
T d1qg8a_ 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETL-NVIRPFLND-N-RVRFYQSDISGVKERTEKT 74 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHH-HHHGGGGGS-T-TEEEEECCCCSHHHHHSSC
T ss_pred CEEEEEEecCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHH-HHHHHhhhh-c-ccccccccccccccccccc
Confidence 8999999999999 99999999999999987 899999999999854 467776543 3 79999875 688
Q ss_pred ChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceee
Q psy10463 270 GLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFR 348 (605)
Q Consensus 270 G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~ 348 (605)
|+++|+|.|++.|+|+||+|+|+|+.+.|+||+.+++.+.+++. .++.+.......+ ..... ... .
T Consensus 75 g~~~a~N~gi~~a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~~-~~~-------~ 141 (255)
T d1qg8a_ 75 RYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLN-----ENRDI-VKE-------T 141 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC--------CE-EEE-------E
T ss_pred hhcccccccccccccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeC-----CCCcE-eee-------e
Confidence 99999999999999999999999999999999999999987754 4444332111110 00000 000 0
Q ss_pred EeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhC----C-CCcccccccchhhHHHHHHHHcCCeEEEecceE
Q psy10463 349 WYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIG----A-YDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH 423 (605)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG----g-fDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~ 423 (605)
....... ... ......+++++++|+++++++ + +|+....+..||+||++|+. .++++.+++...
T Consensus 142 ~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~-~~~~~~~i~~~l 210 (255)
T d1qg8a_ 142 VRPAAQV-----TWN-----APCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVN-HFYPFYPLDEEL 210 (255)
T ss_dssp EECCCSC-----BSC-----CTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT-TTCCBEEEEEEE
T ss_pred cccchhh-----hhh-----hcccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHH-cCCCEEEecCCE
Confidence 0000000 000 011233456789999998874 3 56666666789999999996 567888888776
Q ss_pred EEEE
Q psy10463 424 VAHL 427 (605)
Q Consensus 424 v~H~ 427 (605)
..+.
T Consensus 211 ~~~~ 214 (255)
T d1qg8a_ 211 DLNY 214 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Exostosin domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=7.7e-21 Score=184.24 Aligned_cols=189 Identities=13% Similarity=0.083 Sum_probs=126.9
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 276 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN 276 (605)
+-++|||||+||++ +.|.+||+|+++|++++ |+|||||+|+|++++.+.+.+ ... .+.++....+.|.+.|+|
T Consensus 2 ~~~~tvii~tyn~~-~~l~~~l~sl~~q~~~~---~~iiV~d~~sd~~~~~i~~~~-~~~--~~~~~~~~~~~g~~~a~n 74 (265)
T d1omza_ 2 LDSFTLIMQTYNRT-DLLLRLLNHYQAVPSLH---KVIVVWNNVGEKGPEELWNSL-GPH--PIPVIFKPQTANKMRNRL 74 (265)
T ss_dssp TTCEEEEEEESSCH-HHHHHHHHHHTTSTTEE---EEEEEECCTTCCCTHHHHHHT-CCC--SSCEEEEECSSCCGGGGG
T ss_pred CCcEEEEEEcCCCH-HHHHHHHHHHHcCCCcC---eEEEEECCCCCccHHHHHHHh-ccc--ceEEEEecCCCCchhhhh
Confidence 56899999999999 99999999999999875 677777777777665443322 222 345555667899999999
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEe-eeEeeecC-CeeEEecccccceeeeeccceeeEeecCc
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC-PVIDIISD-VTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~-p~i~~i~~-~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
.|++.|+||||+|||+|+.+.|+||+.+++.+.+++..+++ ......+. .......... .+
T Consensus 75 ~~~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~------~~----------- 137 (265)
T d1omza_ 75 QVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYSYGGFE------LQ----------- 137 (265)
T ss_dssp SCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTEEEEECTT------SC-----------
T ss_pred hhHHhCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcceecccccccccCCccccccccc------cc-----------
Confidence 99999999999999999999999999999999988764443 22211111 1000000000 00
Q ss_pred hhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCccccc-----ccchhhHHHHHHHHcCCe
Q psy10463 355 SDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQV-----WGGENLEMSFRVWQCGGS 415 (605)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~-----~g~ED~dl~~Rl~~~G~~ 415 (605)
..............++.++++|++++..+.+.+.... ...+|.++...+...++.
T Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 197 (265)
T d1omza_ 138 ------TPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQNCDDIAMNFLVTRHTGK 197 (265)
T ss_dssp ------CCSSSSSCCBSEECTTEEEEETHHHHHHHTSCHHHHHHHHHHTCCHHHHHHHHHHHHHSS
T ss_pred ------ccccccccccceeccceeEecHHHHHHHhhhHHHHhhhhhhhcchHHHHHHHHHHHhcCC
Confidence 0000111112234456678999999887776654321 135778887777665544
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Probab=99.73 E-value=3.2e-18 Score=167.58 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=85.0
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecC--------CCc
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP--------GRV 161 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~--------~~~ 161 (605)
|+||||||+||++ .+|.+||+|+++|++++ +|||||||||+|+|. ++++++.+ ..++++++.+ .+.
T Consensus 1 P~vSiiip~yN~~-~~l~~~l~Si~~Qt~~~--~eiivvdd~S~d~t~-~~l~~~~~--~~~i~~~~~~~~~~~~~~~~~ 74 (255)
T d1qg8a_ 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETL-NVIRPFLN--DNRVRFYQSDISGVKERTEKT 74 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHH-HHHGGGGG--STTEEEEECCCCSHHHHHSSC
T ss_pred CEEEEEEecCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHH-HHHHHhhh--hcccccccccccccccccccc
Confidence 8999999999999 99999999999999998 899999999999995 34555532 3568888875 789
Q ss_pred chHHHHHHHhhhccCceEEEecCcccccccc
Q psy10463 162 GLIKARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|.++|+|.|++.|+|+|++++|+|+...+.|
T Consensus 75 g~~~a~N~gi~~a~g~~i~~lD~Dd~~~p~~ 105 (255)
T d1qg8a_ 75 RYAALINQAIEMAEGEYITYATDDNIYMPDR 105 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTTH
T ss_pred hhcccccccccccccccccccccccccccch
Confidence 9999999999999999999999999876433
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=99.66 E-value=4.1e-17 Score=165.99 Aligned_cols=272 Identities=15% Similarity=0.096 Sum_probs=166.6
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHH---HHCCCCEEEEeCC----CCCCh---
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYV---AKLSVPTRVIRSP----GRVGL--- 271 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~---~~~~~~v~~i~~~----~n~G~--- 271 (605)
||||+|||+...+..++ ++.+..+.. .|||||||+|+|. +..+.+... ...+..+...... .+.|.
T Consensus 3 VVIP~~NEe~~il~~~v-~~~a~~P~~--~eIvVvDdsSdDt-t~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g 78 (381)
T d2bo4a1 3 VVFPFKHEHPEVLLHNV-RVAAAHPRV--HEVLCIGYERDQT-YEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDG 78 (381)
T ss_dssp EEEECCSSCHHHHHHHH-HHHHHSTTC--CEEEEEESSCCHH-HHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHH
T ss_pred EEEEcCCCcHHHHHHHH-HHHHhCCCe--eEEEEEcCCCCCc-HHHHHHHhhhhhccccccchhhhhcccccccCCCcHH
Confidence 89999999834555555 566666533 5888888877775 433333222 2223233333221 23344
Q ss_pred -HHHHHHHHhhccCCEEEEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 272 -IKARLLGARQAEGEILVFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 272 -~~arN~G~~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
..|+..|++.|+||+|+|+|+|.. ..|+|++.|+..+..+...+++ .. .. ....|...|.+...+
T Consensus 79 ~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g~d~V~g-~y----------~R--~~~~grvt~~l~~pl 145 (381)
T d2bo4a1 79 MNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRH-YF----------PR--ASTDAMITWMITRTG 145 (381)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEE-EC----------CC--CTTSCHHHHHTHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHhhhcCeEEE-ee----------cc--ccCCCceehHhhHHH
Confidence 456778889999999999999985 7899999999999876554443 21 10 011233333332222
Q ss_pred eecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCccc---ccccchhhHHHHHHHHcCCeEEEe--cceEE
Q psy10463 350 YTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEM---QVWGGENLEMSFRVWQCGGSIEIA--PCSHV 424 (605)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~---~~~g~ED~dl~~Rl~~~G~~i~~~--p~s~v 424 (605)
.... . .......++ ...+|.++++|++++.+- .++.. ..| |=|++|.+.+.++|.+|.-+ |++.+
T Consensus 146 l~~l---~---~~~~~~~i~--dPl~G~~a~~R~~~~~L~-~~~~v~~~~~~-G~Di~lt~~A~~~G~rI~EV~i~~~~l 215 (381)
T d2bo4a1 146 FALL---W---PHTELSWIE--QPLGGELLMRREVAAMLY-EDERVRRRSDW-GIDTLYTFVTVQQGVSIYECYIPEGKA 215 (381)
T ss_dssp HHHH---C---TTSSGGGCS--CTTCCCEEEEHHHHHHHH-HCHHHHTCCST-THHHHHHHHHHHTTCCEEEEECTTCCC
T ss_pred HHHH---h---hhhcccccc--cCCcccceeeHHHHHHhh-hhccccccCCc-ccchHHHHHHHHcCCeEEecCCCHHHH
Confidence 1100 0 000011122 223688999999998762 11111 123 56889999999999998775 77766
Q ss_pred EEEcccC-----------------------CC--------CCCCC---CcchhhhhhHHHHHHHHhhhhHhhhhccCchh
Q psy10463 425 AHLFRKA-----------------------SP--------YSFPG---GVSEVLYGNLARVALVWMDEWAEFYFKFNPEA 470 (605)
Q Consensus 425 ~H~~r~~-----------------------~~--------~~~~~---~~~~~~~rn~~r~a~~W~d~~k~~~~~~~p~~ 470 (605)
.+.++.- .| ...|. ...+....|..+.+..|+++|+.++.+..++.
T Consensus 216 ~~~f~~v~~~~f~l~~~~~~~W~~~~~~~~~p~~~~g~~~~~~p~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (381)
T d2bo4a1 216 HRLYGGLDDLRTMLVECFAAIQSLQHEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQHWTPRQVELLELFTTP 295 (381)
T ss_dssp CCCSCCGGGGHHHHHHHHHHHHHHTTCCCCSCCCEEECCCCCCCHHHHTCCCSCHHHHHHHHTSSCCHHHHHHGGGSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheecceeccccceeeccCcccCCCCCCCccccCHHHHHHHHHHhhHHHHHHHHHhcCHH
Confidence 6654410 11 11110 11235677888888888999999888877643
Q ss_pred hccCCccchHHHHHHhhhcCCcccccccccccCCC
Q psy10463 471 EKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHH 505 (605)
Q Consensus 471 ~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~ 505 (605)
. ++++.++.++. ++.|.++.|+.+++++.+
T Consensus 296 ~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 325 (381)
T d2bo4a1 296 V----REGLRTCQRRP-AFNFMDEMAWAATYHVLL 325 (381)
T ss_dssp H----HHHHHHTTTSC-CCTTCCHHHHHHHHHHHH
T ss_pred H----HHHHHHhcccc-cCCCCcHHHHHHHHHHHH
Confidence 2 56777766654 688999999999999986
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.57 E-value=2.3e-15 Score=152.69 Aligned_cols=68 Identities=57% Similarity=0.943 Sum_probs=64.2
Q ss_pred EEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccc
Q psy10463 126 LLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 126 ivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
|||||||+|+|++..+++++++...++++++++.|.|++.|+|.|++.|+|+|++|||+|+.+.++|+
T Consensus 58 IvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n~G~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l 125 (328)
T d1xhba2 58 VLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWL 125 (328)
T ss_dssp EEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCH
T ss_pred EEEECCCChhhHHHHHHHHHHhcCCCeEEEEecccccchHHHHHHHHhhhcceeeecCcccccChhHH
Confidence 78999999999988999999999889999999999999999999999999999999999999987664
|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Exostosin domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.57 E-value=4e-16 Score=150.31 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=78.9
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 168 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n 168 (605)
|-++|||||+||++ ++|.+||+|+++|++++ |+|||||+|+|+|.+.+.+.+ .....+++...++.|.+.|+|
T Consensus 2 ~~~~tvii~tyn~~-~~l~~~l~sl~~q~~~~---~~iiV~d~~sd~~~~~i~~~~---~~~~~~~~~~~~~~g~~~a~n 74 (265)
T d1omza_ 2 LDSFTLIMQTYNRT-DLLLRLLNHYQAVPSLH---KVIVVWNNVGEKGPEELWNSL---GPHPIPVIFKPQTANKMRNRL 74 (265)
T ss_dssp TTCEEEEEEESSCH-HHHHHHHHHHTTSTTEE---EEEEEECCTTCCCTHHHHHHT---CCCSSCEEEEECSSCCGGGGG
T ss_pred CCcEEEEEEcCCCH-HHHHHHHHHHHcCCCcC---eEEEEECCCCCccHHHHHHHh---cccceEEEEecCCCCchhhhh
Confidence 45799999999999 99999999999999886 778888888888765544332 222356667778899999999
Q ss_pred HHhhhccCceEEEecCcccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
.|++.|+|||++++|+|+.+.+
T Consensus 75 ~~~~~a~ge~i~~lD~D~~~~~ 96 (265)
T d1omza_ 75 QVFPEVETNAVLMVDDDTLISA 96 (265)
T ss_dssp SCCTTCCSSEEEEECTTEEECH
T ss_pred hhHHhCCcCEEEEeCcccCCCH
Confidence 9999999999999999998764
|
| >d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) species: Streptomyces lividans [TaxId: 1916]
Probab=99.50 E-value=1.3e-14 Score=126.28 Aligned_cols=85 Identities=22% Similarity=0.401 Sum_probs=73.9
Q ss_pred ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEe
Q psy10463 512 KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 512 ~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
..+|+|+|+++++|||+.+... .+|++|++|+| |+ +.+|+|.++ ..|.++..+++|||+.+. .+|+.|.++.
T Consensus 3 ~~~~~i~n~~sg~cLdv~~~~~---~~g~~v~~~~c-~~-~~~Q~w~~~-~~g~i~~~~~~cLd~~~~--~~g~~v~~~~ 74 (129)
T d1knma_ 3 ADGGQIKGVGSGRCLDVPDAST---SDGTQLQLWDC-HS-GTNQQWAAT-DAGELRVYGDKCLDAAGT--SNGSKVQIYS 74 (129)
T ss_dssp CCCBCCEETTTCCEEECGGGCC---CTTCBCEEECC-CS-CGGGCBEEC-TTSCEEETTTEEEEESCS--STTCBEEEEE
T ss_pred CCcEEEEECCCCCEEEcCCCCC---CCCeEEEEeCC-CC-CcccceEEc-ccCcEEecCCcceeeccc--cCCCEEEEEe
Confidence 3579999999999999987665 67899999999 65 789999999 889999888899999753 4588999999
Q ss_pred CCCCCCcceEeCC
Q psy10463 592 CSGFNRQRWTYDK 604 (605)
Q Consensus 592 C~~~~~Q~W~~~~ 604 (605)
|++..+|+|.|+.
T Consensus 75 c~~~~~Q~W~~~~ 87 (129)
T d1knma_ 75 CWGGDNQKWRLNS 87 (129)
T ss_dssp CCCCGGGCEEECT
T ss_pred CCCCCeEEEEEeC
Confidence 9988899999875
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.47 E-value=2e-14 Score=125.23 Aligned_cols=86 Identities=29% Similarity=0.562 Sum_probs=73.3
Q ss_pred CCCCCccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCc
Q psy10463 507 LPMDDKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPR 586 (605)
Q Consensus 507 ~p~~~~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~ 586 (605)
+|.+.+++|+|||.++++|||+.+. .+|++|++++| ++.+.+|.|+|+ ..++|+.. ++|||+... |++
T Consensus 2 ~p~~~~~~G~Irn~~s~~CLd~~~~-----~~g~~v~l~~C-~~~~~~Q~w~~t-~~~~i~~~-~~Cld~~~~----~~~ 69 (131)
T d1xhba1 2 IPRHYFSLGEIRNVETNQCLDNMAR-----KENEKVGIFNC-HGMGGNQVFSYT-ANKEIRTD-DLCLDVSKL----NGP 69 (131)
T ss_dssp SCSSEEEEECEEETTTCEEEECTTC-----CTTEECEEEEC-CSCCGGGCEEEE-TTSCEEET-TEEEECCST----TCC
T ss_pred CCCCcEEEEEEEECCCCccEecCCC-----CCCCeEEEEEc-CCCCCceEEEEe-cCceEeeC-CEeeeccCC----ccc
Confidence 5777778999999999999998764 34789999999 776789999999 88999975 499998652 568
Q ss_pred eEEEeCCCCC-CcceEeCC
Q psy10463 587 VRILACSGFN-RQRWTYDK 604 (605)
Q Consensus 587 v~l~~C~~~~-~Q~W~~~~ 604 (605)
|+++.|++.. +|+|.|+.
T Consensus 70 v~l~~C~~~~~~Q~W~~~~ 88 (131)
T d1xhba1 70 VTMLKCHHLKGNQLWEYDP 88 (131)
T ss_dssp CEEEECCTTCGGGCEEEET
T ss_pred EEEEEecCCCceEEEEEcC
Confidence 9999999877 99999864
|
| >d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=99.43 E-value=4.6e-14 Score=123.32 Aligned_cols=82 Identities=26% Similarity=0.489 Sum_probs=69.3
Q ss_pred ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEE
Q psy10463 512 KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRIL 590 (605)
Q Consensus 512 ~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~ 590 (605)
.++|+|+|.++++|||+.+.. +|++|++|+| ++ +.+|+|.|+ ..|.++. .+++|||+.+.. .|+.|.++
T Consensus 3 ~~~g~I~n~~sg~CLdv~~~~-----~g~~v~~~~c-~~-~~~Q~w~~~-~~g~~~~~~s~~cLd~~~~~--~~~~v~~~ 72 (133)
T d1vcla2 3 LFYGRLRNEKSDLCLDVEGSD-----GKGNVLMYSC-ED-NLDQWFRYY-ENGEIVNAKSGMCLDVEGSD--GSGNVGIY 72 (133)
T ss_dssp EEEEEEEETTTCCEEEESSSS-----SCEEEEEECC-CS-CGGGCEEEE-TTSCEEETTTCCEEEESSSS--SCSBEEEE
T ss_pred ceEEEEEECCCCCEEEeCCCC-----CCCeEEEEec-CC-CccEEEEEe-cccceeeccCCceeeecccc--CCCeeEEE
Confidence 579999999999999997543 4789999999 65 789999999 7777774 568999998754 47899999
Q ss_pred eCCCCCCcceEeC
Q psy10463 591 ACSGFNRQRWTYD 603 (605)
Q Consensus 591 ~C~~~~~Q~W~~~ 603 (605)
+|++..+|+|.+.
T Consensus 73 ~c~~~~~Q~W~~~ 85 (133)
T d1vcla2 73 RCDDLRDQMWSRP 85 (133)
T ss_dssp CCCCCGGGCEECC
T ss_pred EeCCCccceEEEc
Confidence 9998779999874
|
| >d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.26 E-value=2.3e-12 Score=111.07 Aligned_cols=81 Identities=16% Similarity=0.261 Sum_probs=64.1
Q ss_pred ccccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEe
Q psy10463 513 FFGRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 513 ~~G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
+.|.||.++ +++|||+.+.. .+|++|++|+| |+ +.+|+|.|+ ..|+|+.. ++|||+.+ .+|++|++++
T Consensus 2 a~~~~ri~g~~G~CLDv~g~~----~~G~~v~l~~C-~g-~~nQ~w~~~-~~g~ir~~-g~CLd~~~---~~g~~V~l~~ 70 (126)
T d1ggpb1 2 AAATVRIAGRDGFCADVNGEG----QNGAAIILKKC-AE-NDNQLWTLK-REATIRSN-GGCLTTAA---AEQAKAGIYD 70 (126)
T ss_dssp CEEEEEEECGGGEEEEESSSC----CSSCBEEEEEC-CC-CTTTEEEEE-TTSCCBSS-SSEEEEEC---SSSCEEEEEC
T ss_pred CceEEEEecCCCeEEecCCCC----CCCCEEEEEcc-CC-CCcccEEEc-cceEEEec-ceEeeecc---CCCccEEEEe
Confidence 345666665 79999997543 46889999999 66 789999999 88999864 59999864 2478999999
Q ss_pred CCCCC--CcceEeCC
Q psy10463 592 CSGFN--RQRWTYDK 604 (605)
Q Consensus 592 C~~~~--~Q~W~~~~ 604 (605)
|++.. +|+|.+..
T Consensus 71 C~~~~~q~~~W~~~~ 85 (126)
T d1ggpb1 71 CTQATAELSAWEIAD 85 (126)
T ss_dssp TTTSCHHHHCCEECT
T ss_pred cCCCCcccEEEEEcC
Confidence 99877 45888764
|
| >d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=99.17 E-value=7.7e-12 Score=111.27 Aligned_cols=82 Identities=20% Similarity=0.319 Sum_probs=63.9
Q ss_pred CccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEE
Q psy10463 511 DKFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 511 ~~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l 589 (605)
+..+|+||+..+++|||+.+.. +|+.|.+|+| |+ +.+|+|.++ ..|+|+. .+++|||+.+..+ +.+.+
T Consensus 7 P~~~G~irn~~sg~CLDv~g~~-----~~~~v~~~~C-~g-~~~Q~w~~~-~~g~ir~~~s~~cLd~~~~~~---~~~~~ 75 (150)
T d1vcla1 7 PLDIGELRSFKSKQCVDIVGNQ-----GSGNIATYDC-DG-LSDQQIIIC-GDGTIRNEARNYCFTPDGSGN---ANVMS 75 (150)
T ss_dssp EEEEECEEETTTCCEEEESSSS-----SCEEEEEECC-CC-CGGGSEEEE-TTSCEEESSSSEEEEESSSSS---EEEEE
T ss_pred CCccEEEEECCCCccEEcCCCC-----CCCeeEEEec-cC-CcceEEEEE-ccccEEEeccCceEeecCCCC---CceEE
Confidence 4568999999999999997654 3678999999 76 679999999 8888885 5689999976432 34555
Q ss_pred EeC----CCCCCcceEeC
Q psy10463 590 LAC----SGFNRQRWTYD 603 (605)
Q Consensus 590 ~~C----~~~~~Q~W~~~ 603 (605)
..| ++..+|+|.+.
T Consensus 76 ~~~~~~~~g~~~Q~W~~~ 93 (150)
T d1vcla1 76 SPCTLYPEIPSSQRWRQG 93 (150)
T ss_dssp EECCCSSSCCGGGCEEEE
T ss_pred EEEEecCCCCcccEEEEc
Confidence 555 44458999874
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.15 E-value=2.1e-11 Score=105.99 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=63.8
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCCC
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACSG 594 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~~ 594 (605)
.|+|.++++|||+.+ +..|.|++| |+..++|.|.++ ..++|++ .+++||++... ..|.+|.+++|+.
T Consensus 6 ~I~n~~s~~CLd~~~--------~~~v~l~~C-~~~~~~Q~w~~~-~~~~l~~~~s~~CL~~~~~--~~g~~v~l~~Cd~ 73 (134)
T d1dqga_ 6 LIYNEDHKRCVDALS--------AISVQTATC-NPEAESQKFRWV-SDSQIMSVAFKLCLGVPSK--TDWASVTLYACDS 73 (134)
T ss_dssp CEEETTTTEEEEEEE--------TTEEEEESC-CTTCGGGCEEES-SSSCEEETTTTEEEECSSS--CTTCBCEEECCCT
T ss_pred EEEECCCCCCEECCC--------CCEEEEEec-cCCCcceEEEEc-CCCceEecCCCcEEeEeec--cCCceEEEEECCC
Confidence 688999999999853 356999999 777889999999 7888875 46899998653 4588999999997
Q ss_pred CC-CcceEeCC
Q psy10463 595 FN-RQRWTYDK 604 (605)
Q Consensus 595 ~~-~Q~W~~~~ 604 (605)
.. +|+|.+..
T Consensus 74 ~~~~Q~W~~~~ 84 (134)
T d1dqga_ 74 KSEYQKWECKN 84 (134)
T ss_dssp TCTTSCEEECS
T ss_pred CCccceeEeCC
Confidence 76 99999853
|
| >d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) species: Streptomyces lividans [TaxId: 1916]
Probab=99.13 E-value=2.5e-11 Score=104.94 Aligned_cols=80 Identities=19% Similarity=0.378 Sum_probs=66.4
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
|.|+. .+++|||+.+. .+|+.|.+|+| ++ ..+|+|.++ ..|.|++ .+++|||+.+...++|+.|.+++|+
T Consensus 49 g~i~~-~~~~cLd~~~~-----~~g~~v~~~~c-~~-~~~Q~W~~~-~~g~i~~~~s~~cLdv~~~~~~~g~~v~~~~c~ 119 (129)
T d1knma_ 49 GELRV-YGDKCLDAAGT-----SNGSKVQIYSC-WG-GDNQKWRLN-SDGSVVGVQSGLCLDAVGNGTANGTLIQLYTCS 119 (129)
T ss_dssp SCEEE-TTTEEEEESCS-----STTCBEEEEEC-CC-CGGGCEEEC-TTSCEEETTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred CcEEe-cCCcceeeccc-----cCCCEEEEEeC-CC-CCeEEEEEe-CCceEEccCCCeEEEECCCCCCCCCEEEEEeCC
Confidence 56664 57899998653 35789999999 55 679999999 7777764 5789999998888889999999999
Q ss_pred CCCCcceEeC
Q psy10463 594 GFNRQRWTYD 603 (605)
Q Consensus 594 ~~~~Q~W~~~ 603 (605)
+..+|+|.++
T Consensus 120 ~~~~Q~Wt~t 129 (129)
T d1knma_ 120 NGSNQRWTRT 129 (129)
T ss_dssp CCGGGCEECC
T ss_pred CCCcceEeeC
Confidence 8779999874
|
| >d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: beta 1,4 galactosyltransferase (b4GalT1) domain: beta 1,4 galactosyltransferase (b4GalT1) species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.13 E-value=8.9e-11 Score=113.04 Aligned_cols=152 Identities=20% Similarity=0.231 Sum_probs=104.3
Q ss_pred CCcceEEEEeechhhHHH---HHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 197 LPKSSIVIVFHNEAWSAL---LRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l---~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
.-+++||||.+|+. ..| ...+..++.+.... ++|+||+...+ ..+..+.
T Consensus 48 ~~kvaIIIPyRdR~-~hL~~fl~~l~~~L~~q~~~--y~I~vieQ~~~-------------------------~~FNRg~ 99 (271)
T d1pzta_ 48 PHKVAIIIPFRNRQ-EHLKYWLYYLHPILQRQQLD--YGIYVINQAGE-------------------------SMFNRAK 99 (271)
T ss_dssp SCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCE--EEEEEEEECSS-------------------------SCCCHHH
T ss_pred cceEEEEEecCChH-HHHHHHHHHHHHHHHhcCCC--EEEEEEeccCC-------------------------cchhhhh
Confidence 34799999999998 544 46666666655333 89999986532 2367888
Q ss_pred HHHHHHhhc----cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 274 ARLLGARQA----EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 274 arN~G~~~A----~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
..|.|+..| ..++++|.|-|+.+..+.+. .. ++ .....+ . .+.
T Consensus 100 llNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~---------Y~---~~------~~p~h~----~--~~~--------- 146 (271)
T d1pzta_ 100 LLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNT---------YR---CF------SQPRHI----S--VAM--------- 146 (271)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECTTEEESBTTSC---------CS---CC------SSCEEC----C--CEE---------
T ss_pred hhhHHHHHhhhccCccEEEEecCCcCccccccc---------cc---cc------ccCcce----e--eec---------
Confidence 899998877 35779999999887554321 00 00 000000 0 000
Q ss_pred eecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecc
Q psy10463 350 YTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPC 421 (605)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 421 (605)
.. ... ........||+++++++.|++++||++.+.+||+||.||..|+...|.++...+.
T Consensus 147 -----~~-----~~~--~~~y~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~~ 206 (271)
T d1pzta_ 147 -----DK-----FGF--SLPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNA 206 (271)
T ss_dssp -----GG-----GTT--SCSCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCCT
T ss_pred -----cc-----ccc--ccccccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccCC
Confidence 00 000 1122356789999999999999999999999999999999999999998775443
|
| >d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=99.12 E-value=2.1e-11 Score=104.90 Aligned_cols=82 Identities=21% Similarity=0.297 Sum_probs=64.8
Q ss_pred ccccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
-|.||.. .+++|||+.+.. .|+.+.++.| +....+|+|.++ ..|.|++ .+++|||+.+. +.+|+.|.+++
T Consensus 42 ~g~ir~~~~~~~CL~~~~~~-----~g~~v~l~~C-~~g~~~Q~W~~~-~~g~i~n~~sg~cLDv~g~-~~~g~~v~~~~ 113 (126)
T d1m2tb2 42 DGSIRPKQLQSQCLTNGRDS-----ISTVINIVSC-SAGSSGQRWVFT-NEGAILNLKNGLAMDVAQA-NPSLQRIIIYP 113 (126)
T ss_dssp TSCEEETTCTTEEEECSSCS-----TTCBCEEEES-TTCCGGGCEEEC-TTSCEEETTTCCEEEEGGG-CGGGCCEEEEC
T ss_pred CCcEEeccCcceeeeecCCC-----CCCeEEEEee-cCCCccceEEEe-cCceEEecCCCceEeccCC-CCCCCeEEEEc
Confidence 3677754 478999986542 4688999999 544679999999 7787775 67899999753 44688999999
Q ss_pred CCCCCCcceEeC
Q psy10463 592 CSGFNRQRWTYD 603 (605)
Q Consensus 592 C~~~~~Q~W~~~ 603 (605)
|+++.+|+|.+.
T Consensus 114 c~g~~nQ~W~~~ 125 (126)
T d1m2tb2 114 ATGNPNQMWLPV 125 (126)
T ss_dssp CCCCGGGCCEEE
T ss_pred CCCChhhcEEcC
Confidence 998789999875
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.09 E-value=8.9e-11 Score=101.65 Aligned_cols=79 Identities=23% Similarity=0.407 Sum_probs=62.7
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
.|+|++ +++|||+.. .|+.|.+++| ++..++|+|.|+...+.|.+ .+++|||+... .+|..|.++.|
T Consensus 51 ~~~i~~--~~~Cld~~~-------~~~~v~l~~C-~~~~~~Q~W~~~~~~~~i~~~~s~~CLd~~~~--~~~~~l~~~~C 118 (131)
T d1xhba1 51 NKEIRT--DDLCLDVSK-------LNGPVTMLKC-HHLKGNQLWEYDPVKLTLQHVNSNQCLDKATE--EDSQVPSIRDC 118 (131)
T ss_dssp TSCEEE--TTEEEECCS-------TTCCCEEEEC-CTTCGGGCEEEETTTTEEEESSSCEEEESCCS--SSTTSCEEEEC
T ss_pred CceEee--CCEeeeccC-------CcccEEEEEe-cCCCceEEEEEcCCCceEECCCCCceEeCccc--CCCceEEEeCC
Confidence 467775 589999853 3578999999 66678999999844567764 67899998754 34789999999
Q ss_pred CCCCCcceEeCC
Q psy10463 593 SGFNRQRWTYDK 604 (605)
Q Consensus 593 ~~~~~Q~W~~~~ 604 (605)
+++.+|+|.|+.
T Consensus 119 ~~~~~Q~W~~~~ 130 (131)
T d1xhba1 119 TGSRSQQWLLRN 130 (131)
T ss_dssp CCCGGGCEEECC
T ss_pred CCCCccEEEEEE
Confidence 987799999874
|
| >d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=99.05 E-value=6.8e-11 Score=101.81 Aligned_cols=93 Identities=16% Similarity=0.199 Sum_probs=69.3
Q ss_pred ccCCCcCCCCCc----cccccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeee
Q psy10463 501 VWPHHFLPMDDK----FFGRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCL 574 (605)
Q Consensus 501 v~p~~~~p~~~~----~~G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CL 574 (605)
+++|+.-..++. .-|.||.. .+++|||..+. .+|++|.+++| +....+|.|.++ ..|.|++ .+++||
T Consensus 26 l~~C~~~~~nQ~W~~~~~g~ir~~~~~~~CL~~~~~-----~~g~~v~~~~C-~~~~~~q~W~~~-~~g~i~~~~sg~CL 98 (127)
T d2aaib2 26 IEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSN-----IRETVVKILSC-GPASSGQRWMFK-NDGTILNLYSGLVL 98 (127)
T ss_dssp EECCCTTSSCCCEEECTTSCEEETTSTTEEEEECCS-----SCSSCEEEEES-TTCCTTSCCEEC-TTSCEECTTTCCEE
T ss_pred EEecCCCCcceEEEECCCCcEEEccccccccccccc-----CCCccEEEEec-CCCCCcceeEEe-cCceEEeeccCceE
Confidence 566654322221 23788754 46899997653 35789999999 555778999999 7777774 678999
Q ss_pred ecCCCCCCCCCceEEEeCCCCCCcceE
Q psy10463 575 DVPEYENDISPRVRILACSGFNRQRWT 601 (605)
Q Consensus 575 d~~~~~~~~g~~v~l~~C~~~~~Q~W~ 601 (605)
|+.+. ..+|+.|.+++|+++.+|+|.
T Consensus 99 dv~g~-~~~g~~v~~~~C~g~~~Q~W~ 124 (127)
T d2aaib2 99 DVRAS-DPSLKQIILYPLHGDPNQIWL 124 (127)
T ss_dssp EEGGG-CGGGCCEEEECCCCCGGGCCE
T ss_pred EecCC-CCCCCEEEEEeCCCCccceeE
Confidence 99763 445789999999987799996
|
| >d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=99.05 E-value=5.8e-11 Score=102.22 Aligned_cols=81 Identities=21% Similarity=0.311 Sum_probs=64.7
Q ss_pred ccccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
-|.|+.. .+++|||+.+. .+|+.|.+++| +....+|.|.++ ..+.|++ .+++|||+.+. ..+|+.|.+++
T Consensus 43 ~g~i~~~~~~~~CLd~~~~-----~~g~~v~l~~c-~~~~~~q~W~~~-~~g~i~~~~s~~CLdv~g~-~~~g~~v~~~~ 114 (127)
T d1abrb2 43 DGSIRSVQNTNNCLTSKDH-----KQGSTILLMGC-SNGWASQRWVFK-NDGSIYSLYDDMVMDVKGS-DPSLKQIILWP 114 (127)
T ss_dssp TSCEEETTEEEEEEEESSS-----STTCBEEEEES-TTCCGGGCCEEC-TTSCEEETTTTEEEEEGGG-CGGGCCEEEEC
T ss_pred CceEEEcCCccEEEeeccc-----CCCceEEEEec-cCCCCceEEEEe-eceEEEecCCCceEEcccC-CCCCCEEEEEc
Confidence 3677754 47899998653 35789999999 555789999999 7788875 56899999754 45688999999
Q ss_pred CCCCCCcceEe
Q psy10463 592 CSGFNRQRWTY 602 (605)
Q Consensus 592 C~~~~~Q~W~~ 602 (605)
|+++.+|+|..
T Consensus 115 C~g~~nQ~W~~ 125 (127)
T d1abrb2 115 YTGKPNQIWLT 125 (127)
T ss_dssp CCCCGGGCCEE
T ss_pred CCCCccceeEE
Confidence 99977999974
|
| >d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.05 E-value=7.8e-11 Score=101.55 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=63.3
Q ss_pred cccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.||.. .+++|||+.+. .+|++|.+++| ++ ..+|+|.++ ..|.|++ .+++|||+.+. +.+|..|++++|
T Consensus 46 g~ir~~~~~~~CL~~~~~-----~~g~~V~~~~C-~~-~~~Q~W~~~-~~g~i~n~~sg~CLDv~g~-~~~g~~v~~~~c 116 (128)
T d1ggpb2 46 KSIRSETNSDNCLTSAAD-----AGPKTILLALC-SG-PASQRWVFD-DDGSILSLYDDKQMDSEGA-AAAAKQIILWWN 116 (128)
T ss_dssp TEEEESSCTTEEECCCCC-----SSCCCCBEEEC-CC-CTTSCCEEC-TTSSEEETTTTEEEEESSS-CCSSSCEEEECC
T ss_pred CCEEEcccCceeEeeccc-----CCCCeEEEEec-CC-CcceEEEEe-CCCcEEEeeCCceEecccC-CCCCCEEEEEcC
Confidence 677743 47899998643 35789999999 55 679999999 7777774 67899999764 456889999999
Q ss_pred CCCCCcceEe
Q psy10463 593 SGFNRQRWTY 602 (605)
Q Consensus 593 ~~~~~Q~W~~ 602 (605)
+++.+|+|..
T Consensus 117 ~g~~nQ~W~~ 126 (128)
T d1ggpb2 117 AAEPNQIWLA 126 (128)
T ss_dssp CCCGGGCCEE
T ss_pred CCChhcEEEe
Confidence 9877999963
|
| >d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: 29-kDa galactose-binding lectin species: Lumbricus terrestris [TaxId: 6398]
Probab=99.04 E-value=4.8e-11 Score=103.21 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=65.7
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec--CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT--DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~--~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.|+|++..+++|||+. |+.|.+|+| ++ +.+|+|.+. ..+.+.. .+++|||+.+..+++|+.|++|+
T Consensus 49 ~g~i~~~~~~~~ld~~---------G~~v~~~~c-~~-~~~qqW~~~-~~g~~~~~~~~~~~LDv~~~~~~~G~~v~~~~ 116 (130)
T d2zqna1 49 QGVIRSKLNDFAIDAS---------HEQIETQPF-DP-NNPKRAWIV-SGNTIAQLSDRDIVLDIIKSDKEAGAHICAWK 116 (130)
T ss_dssp TSCEEETTTCCEEECS---------SSSCEEECC-CT-TCGGGCEEE-ETTEEEETTEEEEEEEEGGGCCSTTCBEEEEE
T ss_pred cCCEEEcccccccccc---------CcceEEecc-CC-CcccEEEEc-CCCeEEEeccCCeEEECCCCCCCCCCEEEEEc
Confidence 4678888899999973 578999999 55 678999887 6666653 35799999998888899999999
Q ss_pred CCCCCCcceEeCC
Q psy10463 592 CSGFNRQRWTYDK 604 (605)
Q Consensus 592 C~~~~~Q~W~~~~ 604 (605)
|++..+|+|.+..
T Consensus 117 ~~g~~nQ~W~l~~ 129 (130)
T d2zqna1 117 QHGGPNQKFIIES 129 (130)
T ss_dssp CCCCGGGCEEEEE
T ss_pred CCCCccceEEEee
Confidence 9998899999864
|
| >d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: 29-kDa galactose-binding lectin species: Lumbricus terrestris [TaxId: 6398]
Probab=99.04 E-value=1e-10 Score=101.13 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=65.9
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCC-CCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHL-PVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~-~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
+-.|++..+++|||+.+..+ .+|++|.+|+|... ...+|+|.++ ..|+|+. .+++|||+. |+.|.+++
T Consensus 3 ~y~I~~~~sg~~LDv~g~~~---~~Ga~v~~w~~~~~~g~~nQ~W~~~-~~g~i~~~~~~~~ld~~------G~~v~~~~ 72 (130)
T d2zqna1 3 FFYIKSELNGKVLDIEGQNP---APGSKIITWDQKKGPTAVNQLWYTD-QQGVIRSKLNDFAIDAS------HEQIETQP 72 (130)
T ss_dssp CEEEEETTTSCEEEEGGGCC---STTCBEEEECCCCSGGGGGGCEEEC-TTSCEEETTTCCEEECS------SSSCEEEC
T ss_pred EEEEEECCCCCEEEeCCCCC---CCCceEEEEEecCCCCCcceEEEEe-ccCCEEEcccccccccc------CcceEEec
Confidence 55799999999999988776 68999999998211 2458999999 8888884 567999975 46899999
Q ss_pred CCCCCCcceEeC
Q psy10463 592 CSGFNRQRWTYD 603 (605)
Q Consensus 592 C~~~~~Q~W~~~ 603 (605)
|++..+|+|.+.
T Consensus 73 c~~~~~qqW~~~ 84 (130)
T d2zqna1 73 FDPNNPKRAWIV 84 (130)
T ss_dssp CCTTCGGGCEEE
T ss_pred cCCCcccEEEEc
Confidence 999889999764
|
| >d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.03 E-value=1.6e-10 Score=99.52 Aligned_cols=72 Identities=18% Similarity=0.363 Sum_probs=58.1
Q ss_pred ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec--CCCeeeecCCCCCCCCCceEEEeCCCCCCcc
Q psy10463 522 THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT--DESVCLDVPEYENDISPRVRILACSGFNRQR 599 (605)
Q Consensus 522 ~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~--~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~ 599 (605)
+++|||+.+. +++|.+++| ++...+|+|.|+ ..|.|+. .+++||++.+. ..|..|.++.|++..+|+
T Consensus 13 ~~lCLd~~~~-------~~~v~l~~C-~~~~~nQ~W~~~-~dg~ir~~~~~~~CL~~~~~--~~g~~V~~~~C~~~~~Q~ 81 (128)
T d1ggpb2 13 AQLCMQAGNG-------PANLWMSEC-RAGKAEQQWALL-TDKSIRSETNSDNCLTSAAD--AGPKTILLALCSGPASQR 81 (128)
T ss_dssp GGCEECC-TT-------T-BCCEECC-CSSCTTSEEEEE-TTTEEEESSCTTEEECCCCC--SSCCCCBEEECCCCTTSC
T ss_pred CCcCEecCCC-------CceEEEEeC-CCCCcceEEEEc-CCCCEEEcccCceeEeeccc--CCCCeEEEEecCCCcceE
Confidence 7999998642 357999999 666789999999 8899984 45799998653 458899999999988999
Q ss_pred eEeCC
Q psy10463 600 WTYDK 604 (605)
Q Consensus 600 W~~~~ 604 (605)
|.++.
T Consensus 82 W~~~~ 86 (128)
T d1ggpb2 82 WVFDD 86 (128)
T ss_dssp CEECT
T ss_pred EEEeC
Confidence 99875
|
| >d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=99.03 E-value=7.2e-11 Score=102.82 Aligned_cols=77 Identities=16% Similarity=0.297 Sum_probs=62.3
Q ss_pred ccccccccccCCCCCCCCCCeEEeecCCCC-CcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCCCcce
Q psy10463 522 THKCVEKPLAKGSMNQASGPASLLPCTHLP-VLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQRW 600 (605)
Q Consensus 522 ~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~-~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W 600 (605)
+++|||+.+... .+|++|.+|+| ++. ..+|+|.++ ..|.|+.. ++||++.+....+|..|.++.|++..+|+|
T Consensus 17 ~G~CLDv~g~~~---~~G~~v~l~~C-~~~~~~~Q~w~~~-~~g~i~~~-~~cld~~~~~~~~g~~v~~~~~~~~~~Q~W 90 (135)
T d1rzob1 17 NGLCVDVTGEEF---FDGNPIQLWPC-KSNTDWNQLWTLR-KDSTIRSN-GKCLTISKSSPRQQVVIYNCSTATVGATRW 90 (135)
T ss_dssp GGEEEEEGGGCC---STTCBEEEEEC-CSSCCGGGCEECC-TTSBCBBT-TEEEEEECCTTCCEEEEEETTTSCGGGTBC
T ss_pred CCeEEEcCCCCC---CCCCEEEEEec-CCCCCccEEEEEC-CCCeEEec-CceeeccCCccCCCeEEEEecCCCCCceeE
Confidence 689999987765 67899999999 553 368999999 88999875 599999887776666677777776669999
Q ss_pred EeCC
Q psy10463 601 TYDK 604 (605)
Q Consensus 601 ~~~~ 604 (605)
.+..
T Consensus 91 ~~~~ 94 (135)
T d1rzob1 91 QIWD 94 (135)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9874
|
| >d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=99.03 E-value=9.8e-11 Score=101.66 Aligned_cols=81 Identities=21% Similarity=0.358 Sum_probs=62.5
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC---C--ceee-cCCCeeeecCCCCCCCCCce
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP---T--DLIA-TDESVCLDVPEYENDISPRV 587 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~---~--g~i~-~~~~~CLd~~~~~~~~g~~v 587 (605)
-|.|++..+++|||+.+.. .|++|.+|+| ++ ..+|+|.+... + ..|+ ..+++|||+.+.. +|+.|
T Consensus 46 ~g~~~~~~s~~cLd~~~~~-----~~~~v~~~~c-~~-~~~Q~W~~~~~~~~~~~~~i~~~~s~~cLd~~~~~--~g~~v 116 (133)
T d1vcla2 46 NGEIVNAKSGMCLDVEGSD-----GSGNVGIYRC-DD-LRDQMWSRPNAYCNGDYCSFLNKESNKCLDVSGDQ--GTGDV 116 (133)
T ss_dssp TSCEEETTTCCEEEESSSS-----SCSBEEEECC-CC-CGGGCEECCGGGCBTTEECCEETTTCCEEEESSSS--SCSBE
T ss_pred ccceeeccCCceeeecccc-----CCCeeEEEEe-CC-CccceEEEcccccCCccEEEEEcCCCCEEEecCCC--CCceE
Confidence 3678888899999997653 3688999999 65 67999998411 1 2344 3568999997643 47899
Q ss_pred EEEeCCCCCCcceEeC
Q psy10463 588 RILACSGFNRQRWTYD 603 (605)
Q Consensus 588 ~l~~C~~~~~Q~W~~~ 603 (605)
.+++|++..+|+|+|.
T Consensus 117 ~~~~c~~~~~Q~W~f~ 132 (133)
T d1vcla2 117 GTWQCDGLPDQRFKWV 132 (133)
T ss_dssp EEECCCCCGGGCEEEE
T ss_pred EEEcCCCCHHhCEEEe
Confidence 9999998779999973
|
| >d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=99.02 E-value=1.6e-10 Score=99.22 Aligned_cols=70 Identities=24% Similarity=0.423 Sum_probs=57.3
Q ss_pred ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec--CCCeeeecCCCCCCCCCceEEEeCCCCC-Cc
Q psy10463 522 THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT--DESVCLDVPEYENDISPRVRILACSGFN-RQ 598 (605)
Q Consensus 522 ~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~--~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q 598 (605)
.++|||+. |+.|.|++| |+...+|+|.++ ..|.|+. .+++||++.+.. .|+.|.++.|+... +|
T Consensus 12 ~~lCLda~---------G~~v~l~~C-~~~~~~Q~W~l~-~~g~ir~~~~~~~CL~~~~~~--~g~~v~l~~C~~g~~~Q 78 (126)
T d1m2tb2 12 RDLCMESA---------GGSVYVETC-TAGQENQRWALY-GDGSIRPKQLQSQCLTNGRDS--ISTVINIVSCSAGSSGQ 78 (126)
T ss_dssp GGCEEEEE---------TTEEEEECC-CTTCGGGCEEEC-TTSCEEETTCTTEEEECSSCS--TTCBCEEEESTTCCGGG
T ss_pred cccCCccC---------CCeEEEEec-CCCCcceEEEEc-CCCcEEeccCcceeeeecCCC--CCCeEEEEeecCCCccc
Confidence 78999974 467999999 666789999999 7889984 357999986543 46899999998765 99
Q ss_pred ceEeCC
Q psy10463 599 RWTYDK 604 (605)
Q Consensus 599 ~W~~~~ 604 (605)
+|.|+.
T Consensus 79 ~W~~~~ 84 (126)
T d1m2tb2 79 RWVFTN 84 (126)
T ss_dssp CEEECT
T ss_pred eEEEec
Confidence 999875
|
| >d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=99.02 E-value=9.6e-11 Score=101.39 Aligned_cols=80 Identities=19% Similarity=0.257 Sum_probs=63.9
Q ss_pred cccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.|+.. .+++||+..+. .+|++|.+++| ++ ..+|+|.++ .+|.|++ .+++|||+.+.. ..|+.|.+++|
T Consensus 46 g~i~~~~~~~lCl~~~~~-----~~g~~v~l~~C-~~-~~~q~W~~~-~~g~i~~~~s~~CLdv~g~~-~~g~~v~~~~C 116 (131)
T d1hwmb2 46 RTIRVNNSRGLCVTSNGY-----VSKDLIVIRKC-QG-LATQRWFFN-SDGSVVNLKSTRVMDVKESD-VSLQEVIIFPA 116 (131)
T ss_dssp SCEEETTEEEEEEEESCS-----STTEEEEEEEC-CC-CGGGCCEEC-TTSCEEETTTTEEEEECTTC-SSSCBEEEECC
T ss_pred CcEEeccCcceEEecccc-----CCCCEEEEEEc-CC-CcceEEEEe-CCCeEEeccCCeEEEecCCC-CCCCEEEEECC
Confidence 667643 46899997643 35789999999 55 679999999 7777774 678999998643 46789999999
Q ss_pred CCCCCcceEeC
Q psy10463 593 SGFNRQRWTYD 603 (605)
Q Consensus 593 ~~~~~Q~W~~~ 603 (605)
+++.+|+|.+.
T Consensus 117 ~~~~~Q~W~~~ 127 (131)
T d1hwmb2 117 TGNPNQQWRTQ 127 (131)
T ss_dssp CCCGGGCEEEE
T ss_pred CCCcccceEee
Confidence 98779999985
|
| >d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=99.02 E-value=2e-10 Score=98.84 Aligned_cols=77 Identities=21% Similarity=0.364 Sum_probs=60.7
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec--CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT--DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~--~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.+.|.-. +++|||+. |++|+|++| |+...+|+|.|+ ..|+|+. ..++||++.+. ..|+.|.++.
T Consensus 6 ~~~i~g~-s~lCLd~~---------G~~v~l~~C-~~~~~nQ~W~~~-~~g~ir~~~~~~~CL~~~~~--~~g~~v~~~~ 71 (127)
T d2aaib2 6 VTTIVGL-YGLCLQAN---------SGQVWIEDC-SSEKAEQQWALY-ADGSIRPQQNRDNCLTSDSN--IRETVVKILS 71 (127)
T ss_dssp EEEEECG-GGCEEEEE---------TTEEEEECC-CTTSSCCCEEEC-TTSCEEETTSTTEEEEECCS--SCSSCEEEEE
T ss_pred EEEEEec-CCcCCccC---------CCeEEEEec-CCCCcceEEEEC-CCCcEEEccccccccccccc--CCCccEEEEe
Confidence 3444432 79999963 478999999 776789999999 8899984 34699998653 4588999999
Q ss_pred CCCCC-CcceEeCC
Q psy10463 592 CSGFN-RQRWTYDK 604 (605)
Q Consensus 592 C~~~~-~Q~W~~~~ 604 (605)
|+... +|+|.+..
T Consensus 72 C~~~~~~q~W~~~~ 85 (127)
T d2aaib2 72 CGPASSGQRWMFKN 85 (127)
T ss_dssp STTCCTTSCCEECT
T ss_pred cCCCCCcceeEEec
Confidence 98665 99999864
|
| >d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=99.00 E-value=3.4e-10 Score=98.12 Aligned_cols=83 Identities=19% Similarity=0.310 Sum_probs=66.6
Q ss_pred ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEe
Q psy10463 512 KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 512 ~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.+.+.|.. .+++|||+.+... .+|++|.+|+| |+ +.+|+|.++ ..|.++.. ++||+..+.. .|+.|.++.
T Consensus 8 ~~~~~i~~-~sG~CLDv~g~~~---~~g~~v~~~~C-~g-~~~Q~w~~~-~~g~~~~~-~~~l~~~~~~--~g~~v~~~~ 77 (133)
T d1hwmb1 8 PFTRRIVG-RDGLCVDVRNGYD---TDGTPIQLWPC-GT-QRNQQWTFY-NDKTIRSM-GKCMTANGLN--SGSYIMITD 77 (133)
T ss_dssp CEEEEEEC-GGGCEEEEGGGCC---STTCBEEEECC-CC-CGGGCEEEC-TTSCEEET-TEEEEESSSS--TTCBEEEEC
T ss_pred CCeEEEEc-cCCcEEECCCCCC---CCCCEEEEEcc-CC-CccccEEEe-cCccEEEe-eeecccCCCC--CCCeeEEEe
Confidence 34555554 4899999988766 67899999999 66 789999999 88888875 4999987643 478999999
Q ss_pred CCCCC--CcceEeCC
Q psy10463 592 CSGFN--RQRWTYDK 604 (605)
Q Consensus 592 C~~~~--~Q~W~~~~ 604 (605)
|++.. +|+|.+..
T Consensus 78 c~~~~~~~q~w~~~~ 92 (133)
T d1hwmb1 78 CSTAAEDATKWEVLI 92 (133)
T ss_dssp TTTSCTTSSCCEEET
T ss_pred cCCCCCceeEEEEcC
Confidence 98765 78998764
|
| >d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.00 E-value=1.4e-10 Score=99.47 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=66.2
Q ss_pred ccCCCcCCCCC---ccccccccccccccccccccCCCCCCCCCCeEEeecCCCCC-cceEEEEecCCceeec-CCCeeee
Q psy10463 501 VWPHHFLPMDD---KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPV-LTQMFVMKLPTDLIAT-DESVCLD 575 (605)
Q Consensus 501 v~p~~~~p~~~---~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~-~nQ~w~~~~~~g~i~~-~~~~CLd 575 (605)
+|||+.-+... ..-|+||+ +++|||+.+ .+|++|.+|+| ++.. .+|+|.++ ..|.|++ .+++|||
T Consensus 30 l~~C~g~~nQ~w~~~~~g~ir~--~g~CLd~~~------~~g~~V~l~~C-~~~~~q~~~W~~~-~~g~i~n~~sg~cLd 99 (126)
T d1ggpb1 30 LKKCAENDNQLWTLKREATIRS--NGGCLTTAA------AEQAKAGIYDC-TQATAELSAWEIA-DNGTIINPASSLVLS 99 (126)
T ss_dssp EEECCCCTTTEEEEETTSCCBS--SSSEEEEEC------SSSCEEEEECT-TTSCHHHHCCEEC-TTSCEEETTTTEEEE
T ss_pred EEccCCCCcccEEEccceEEEe--cceEeeecc------CCCccEEEEec-CCCCcccEEEEEc-CCCcEEccccceeEE
Confidence 45666433221 12377875 689999864 34789999999 5532 34589998 7777764 6789999
Q ss_pred cCCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 576 VPEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 576 ~~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
+.+. ..|+.|.++.|++..+|+|.+.
T Consensus 100 ~~~~--~~g~~l~~~~~~~~~~Q~W~~~ 125 (126)
T d1ggpb1 100 SGAA--NSLLDLGVQTNSYASAQGWRTG 125 (126)
T ss_dssp CSSS--CTTEECEEECCCCCSTTCCEES
T ss_pred ecCC--CCCceEEEEeCCCCcccccCcC
Confidence 9754 4588999999999889999875
|
| >d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=98.99 E-value=5e-10 Score=97.45 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=64.9
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
..+|... +++|||+.+... .+|++|.+|.|+.....+|+|.++ ..|.|+.. ++|||+.+. ..|+.|.+++|+
T Consensus 10 ~~~i~~~-~G~ClDv~~~~~---~~G~~v~l~~c~~n~~~~Q~w~~~-~~g~ir~~-~~cld~~~~--~~g~~v~~~~C~ 81 (136)
T d1m2tb1 10 IVRIVGR-NGMTVDVRDDDF---HDGNQIQLWPSKSNNDPNQLWTIK-KDGTIRSN-GSCLTTYGY--TAGVYVMIFDCN 81 (136)
T ss_dssp EECEECG-GGCEEEEGGGCC---STTCBEEEECCCCSCCGGGCEEEC-TTSCEEET-TEEEEESCS--STTCBEEEEETT
T ss_pred cEEEeCC-CCeEEEcCCCCC---CCCCEEEEEecCCCCCccEEEEEe-CCccEEEC-CccccccCC--CCCCeEEEEecC
Confidence 3455543 699999987665 678999999993233568999999 88999975 599999764 358899999999
Q ss_pred CCC--CcceEeCC
Q psy10463 594 GFN--RQRWTYDK 604 (605)
Q Consensus 594 ~~~--~Q~W~~~~ 604 (605)
+.. +|+|.+..
T Consensus 82 ~~~~~~q~w~~~~ 94 (136)
T d1m2tb1 82 TAVREATIWQIWG 94 (136)
T ss_dssp TSCGGGGCCEECT
T ss_pred CCCCccEEEeEcC
Confidence 765 68898764
|
| >d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=98.98 E-value=2.6e-10 Score=99.73 Aligned_cols=75 Identities=17% Similarity=0.285 Sum_probs=60.6
Q ss_pred cccccccccccCCCCCCCCCCeEEeecCCCC-CcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCCCcc
Q psy10463 521 QTHKCVEKPLAKGSMNQASGPASLLPCTHLP-VLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQR 599 (605)
Q Consensus 521 ~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~-~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~ 599 (605)
.+++|||+.+... .+|++|.+|+| |+. +.+|+|.++ ..|+++.. ++|||+.+. ..|+.|.+++|++..+|+
T Consensus 21 ~sg~CLDv~~~~~---~~G~~v~~~~C-~g~~~~nq~w~~~-~~g~ir~~-g~cld~~~~--~~G~~v~~~~C~~~~~q~ 92 (140)
T d1abrb1 21 RDGMCVDVYDNGY---HNGNRIIMWKC-KDRLEENQLWTLK-SDKTIRSN-GKCLTTYGY--APGSYVMIYDCTSAVAEA 92 (140)
T ss_dssp GGGCEEEEGGGCC---STTCBEEEECC-CSSCCGGGCEEEC-TTSBEEET-TEEEEESCS--STTCBEEEECTTTSCGGG
T ss_pred CCCeEEEcCCCCC---CCCCEEEEEec-CCCCCccEEEEEC-CCCeEEEc-CccccccCC--CCCCEEEEEecCCCCCcc
Confidence 3799999987766 67999999999 653 468999999 88999875 599999764 458899999999987554
Q ss_pred --eEeC
Q psy10463 600 --WTYD 603 (605)
Q Consensus 600 --W~~~ 603 (605)
|.+.
T Consensus 93 ~~~~~~ 98 (140)
T d1abrb1 93 TYWEIW 98 (140)
T ss_dssp SBCEEC
T ss_pred eEEEec
Confidence 5443
|
| >d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=98.97 E-value=2.2e-10 Score=98.52 Aligned_cols=77 Identities=16% Similarity=0.324 Sum_probs=60.6
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecC--CCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATD--ESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~--~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.+.|.. .+++|||+. |+.|.+|+| |+...+|+|.++ ..|.|+.. +++|||+.+. ..|+.|.++.
T Consensus 6 ~~~i~g-~s~lCld~~---------G~~v~l~~C-~~~~~nQ~w~~~-~~g~i~~~~~~~~CLd~~~~--~~g~~v~l~~ 71 (127)
T d1abrb2 6 VTSISG-YSDLCMQAQ---------GSNVWMADC-DSNKKEQQWALY-TDGSIRSVQNTNNCLTSKDH--KQGSTILLMG 71 (127)
T ss_dssp EECEEC-GGGCEEEEE---------TTEEEEECC-CTTCGGGCEEEC-TTSCEEETTEEEEEEEESSS--STTCBEEEEE
T ss_pred EEEEEe-cCCcCCccC---------CceEEEEeC-CCCCceEEEEec-CCceEEEcCCccEEEeeccc--CCCceEEEEe
Confidence 444432 279999963 578999999 776779999999 88888853 4699998753 3478999999
Q ss_pred CCCCC-CcceEeCC
Q psy10463 592 CSGFN-RQRWTYDK 604 (605)
Q Consensus 592 C~~~~-~Q~W~~~~ 604 (605)
|+... +|+|.++.
T Consensus 72 c~~~~~~q~W~~~~ 85 (127)
T d1abrb2 72 CSNGWASQRWVFKN 85 (127)
T ss_dssp STTCCGGGCCEECT
T ss_pred ccCCCCceEEEEee
Confidence 98766 99999875
|
| >d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=98.91 E-value=6.3e-10 Score=98.56 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=66.3
Q ss_pred ccCCCcCCCCC---ccccccccccccccccccccCCCCCCCCCCeEEeecCC--CCCcceEEEEecCC------------
Q psy10463 501 VWPHHFLPMDD---KFFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTH--LPVLTQMFVMKLPT------------ 563 (605)
Q Consensus 501 v~p~~~~p~~~---~~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~--~~~~nQ~w~~~~~~------------ 563 (605)
+|+|+.-+... ..-|+||+..+++|||+.+..+ +.+.+..|.+ ....+|+|.+. ..
T Consensus 35 ~~~C~g~~~Q~w~~~~~g~ir~~~s~~cLd~~~~~~------~~~~~~~~~~~~~g~~~Q~W~~~-~~~~~~~~~~~~~~ 107 (150)
T d1vcla1 35 TYDCDGLSDQQIIICGDGTIRNEARNYCFTPDGSGN------ANVMSSPCTLYPEIPSSQRWRQG-RRKTFTDNGGIEQV 107 (150)
T ss_dssp EECCCCCGGGSEEEETTSCEEESSSSEEEEESSSSS------EEEEEEECCCSSSCCGGGCEEEE-EEEEEECTTSCEEE
T ss_pred EEeccCCcceEEEEEccccEEEeccCceEeecCCCC------CceEEEEEEecCCCCcccEEEEc-CCCccccccccccc
Confidence 57776543322 1248899988999999865432 4456665521 23578999885 22
Q ss_pred -ceee-cCCCeeeecCCCCCCCCCceEEEeCCCCCCcceEeCCC
Q psy10463 564 -DLIA-TDESVCLDVPEYENDISPRVRILACSGFNRQRWTYDKE 605 (605)
Q Consensus 564 -g~i~-~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~~~~ 605 (605)
+.|+ ..+++|||+.+.. .++.|+++.|++..+|+|.|..+
T Consensus 108 ~~~i~n~~sg~CLdv~g~~--~~~~v~~~~C~g~~~Q~w~f~s~ 149 (150)
T d1vcla1 108 ATEIINLASGKCLDIEGSD--GTGDIGVYDCQNLDDQYFYVRSR 149 (150)
T ss_dssp EEEEEETTTCCEEEESSSS--SCSBEEEECCCCCGGGCEEECCC
T ss_pred ceEEEECCCCCEEeeccCC--CCccEEEEeCCCCccCcEEEecC
Confidence 2344 4678999998643 47799999999888999999753
|
| >d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=98.90 E-value=4.6e-10 Score=97.01 Aligned_cols=72 Identities=17% Similarity=0.421 Sum_probs=58.9
Q ss_pred ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecC--CCeeeecCCCCCCCCCceEEEeCCCCCCcc
Q psy10463 522 THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATD--ESVCLDVPEYENDISPRVRILACSGFNRQR 599 (605)
Q Consensus 522 ~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~--~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~ 599 (605)
+++|||+.+ .++.|.+++| |+...+|+|.++ ..|.|+.. .++||+..+. .+|++|.+++|++..+|+
T Consensus 13 ~~lCLd~~g-------~~~~v~l~~C-~~~~~~Q~W~l~-~~g~i~~~~~~~lCl~~~~~--~~g~~v~l~~C~~~~~q~ 81 (131)
T d1hwmb2 13 NEMCLQANG-------ENNNVWMEDC-DVTSVQQQWALF-DDRTIRVNNSRGLCVTSNGY--VSKDLIVIRKCQGLATQR 81 (131)
T ss_dssp TTEEEEEET-------TTTEEEEEEC-CTTCGGGCEEEC-TTSCEEETTEEEEEEEESCS--STTEEEEEEECCCCGGGC
T ss_pred CCcCCCcCC-------CCceEEEEec-CCCChheEEEEc-CCCcEEeccCcceEEecccc--CCCCEEEEEEcCCCcceE
Confidence 789999864 2468999999 776789999999 78899854 3589987653 458899999999988999
Q ss_pred eEeCC
Q psy10463 600 WTYDK 604 (605)
Q Consensus 600 W~~~~ 604 (605)
|.++.
T Consensus 82 W~~~~ 86 (131)
T d1hwmb2 82 WFFNS 86 (131)
T ss_dssp CEECT
T ss_pred EEEeC
Confidence 99865
|
| >d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=98.89 E-value=9e-10 Score=95.77 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=62.9
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCC-CCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHL-PVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~-~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.||+ +++|||+.+. .+|+.|.+++| ++ ...+|.|.++ .+|.|++ .+++|||+.+. .+|+.|.+++|
T Consensus 55 g~ir~--~~~cld~~~~-----~~g~~v~~~~C-~~~~~~~q~w~~~-~~g~i~n~~s~lcLd~~~~--~~g~~v~~~~c 123 (136)
T d1m2tb1 55 GTIRS--NGSCLTTYGY-----TAGVYVMIFDC-NTAVREATIWQIW-GNGTIINPRSNLVLAASSG--IKGTTLTVQTL 123 (136)
T ss_dssp SCEEE--TTEEEEESCS-----STTCBEEEEET-TTSCGGGGCCEEC-TTSCEEETTTTEEEECSSC--STTCBCEEECC
T ss_pred ccEEE--CCccccccCC-----CCCCeEEEEec-CCCCCccEEEeEc-CCCcEEeccCCeEeccccC--CCCCEEEEEcC
Confidence 56665 5799998654 35789999999 54 3457999998 7777764 67899998654 35889999999
Q ss_pred CCCCCcceEeCCC
Q psy10463 593 SGFNRQRWTYDKE 605 (605)
Q Consensus 593 ~~~~~Q~W~~~~~ 605 (605)
++..+|+|.+..+
T Consensus 124 ~~~~~Q~W~i~n~ 136 (136)
T d1m2tb1 124 DYTLGQGWLAGND 136 (136)
T ss_dssp CCCGGGCCEESSC
T ss_pred CCCccceEEecCC
Confidence 9877999998754
|
| >d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=98.86 E-value=1.6e-09 Score=94.66 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=61.2
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCC-cceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEe
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPV-LTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILA 591 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~-~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~ 591 (605)
.|+||+ +++|||+.+. .+|+.|.+|+| ++.. ..|.|.+. .+|.|++ .+++|||+.+. .+|+.|.++.
T Consensus 59 ~g~ir~--~g~cld~~~~-----~~G~~v~~~~C-~~~~~q~~~~~~~-~~g~i~n~~sg~cLd~~~~--~~g~~v~~~~ 127 (140)
T d1abrb1 59 DKTIRS--NGKCLTTYGY-----APGSYVMIYDC-TSAVAEATYWEIW-DNGTIINPKSALVLSAESS--SMGGTLTVQT 127 (140)
T ss_dssp TSBEEE--TTEEEEESCS-----STTCBEEEECT-TTSCGGGSBCEEC-TTSCEEETTTTEEEECCCS--STTCBCEEEC
T ss_pred CCeEEE--cCccccccCC-----CCCCEEEEEec-CCCCCcceEEEec-cCceEEeceeeeEeccccc--CCCCEEEEEe
Confidence 377876 5899998653 45899999999 5532 23567777 7778874 57899998764 4588999999
Q ss_pred CCCCCCcceEeC
Q psy10463 592 CSGFNRQRWTYD 603 (605)
Q Consensus 592 C~~~~~Q~W~~~ 603 (605)
|++..+|+|.+.
T Consensus 128 c~g~~~Q~W~~~ 139 (140)
T d1abrb1 128 NEYLMRQGWRTG 139 (140)
T ss_dssp CCCCGGGCCEES
T ss_pred CCCCccceeecC
Confidence 998889999975
|
| >d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=98.86 E-value=6.5e-10 Score=96.59 Aligned_cols=79 Identities=11% Similarity=0.072 Sum_probs=61.7
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeCC
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILACS 593 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C~ 593 (605)
|.|++ +++|||..+... .+|..|.++.| ++ ..+|+|.++ ..+.|++ .+++|||+.+. ..|+.|.++.|+
T Consensus 55 g~i~~--~~~cld~~~~~~---~~g~~v~~~~~-~~-~~~Q~W~~~-~~~~i~~~~sg~cLd~~~~--~~g~~v~~~~c~ 124 (135)
T d1rzob1 55 STIRS--NGKCLTISKSSP---RQQVVIYNCST-AT-VGATRWQIW-DNRTIINPRSGLVLAATSG--NSGTKLTVQTNI 124 (135)
T ss_dssp SBCBB--TTEEEEEECCTT---CCEEEEEETTT-SC-GGGTBCEEC-TTSBEEETTTTEEEECSCS--STTCBCEEEECC
T ss_pred CeEEe--cCceeeccCCcc---CCCeEEEEecC-CC-CCceeEEEc-CCCEEEeCCCCeEEeecCC--CCCCEEEEEcCC
Confidence 66776 589999876554 44566777777 43 678999999 7777764 67899999765 358899999999
Q ss_pred CCCCcceEeC
Q psy10463 594 GFNRQRWTYD 603 (605)
Q Consensus 594 ~~~~Q~W~~~ 603 (605)
++.+|+|.++
T Consensus 125 ~~~~Q~W~~~ 134 (135)
T d1rzob1 125 YAVSQGWLPT 134 (135)
T ss_dssp CCGGGBCBCC
T ss_pred CCcccEeecc
Confidence 8889999875
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=98.83 E-value=3.2e-09 Score=107.09 Aligned_cols=96 Identities=21% Similarity=0.223 Sum_probs=60.8
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHH---HHhcCCCeEEe--------ecCCCcc
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEY---VAKLSVPTRVI--------RSPGRVG 162 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~---~~~~~~~v~~~--------~~~~~~G 162 (605)
||||+|||+.+.+..++ +++...+.- .|||||||+|+|.+ ..+.+.. ....+..+... +..++.|
T Consensus 3 VVIP~~NEe~~il~~~v-~~~a~~P~~--~eIvVvDdsSdDtt-~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g 78 (381)
T d2bo4a1 3 VVFPFKHEHPEVLLHNV-RVAAAHPRV--HEVLCIGYERDQTY-EAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDG 78 (381)
T ss_dssp EEEECCSSCHHHHHHHH-HHHHHSTTC--CEEEEEESSCCHHH-HHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHH
T ss_pred EEEEcCCCcHHHHHHHH-HHHHhCCCe--eEEEEEcCCCCCcH-HHHHHHhhhhhccccccchhhhhcccccccCCCcHH
Confidence 89999999966666666 455555432 58888877777765 3322222 22223333222 2233344
Q ss_pred hHHHHHHHhhhccCceEEEecCcc-ccccccc
Q psy10463 163 LIKARLLGARQAEGEILVFLDAHC-ECTLVFN 193 (605)
Q Consensus 163 ~~~a~n~g~~~a~g~~i~~lD~d~-~~~~~~~ 193 (605)
+..|...|++.|+|++++|+|+|. ...+.|.
T Consensus 79 ~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i 110 (381)
T d2bo4a1 79 MNTALRYFLEETQWERIHFYDADITSFGPDWI 110 (381)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTCSSCCHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHH
Confidence 456778888999999999999998 4455443
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=98.80 E-value=2e-09 Score=95.61 Aligned_cols=85 Identities=12% Similarity=0.117 Sum_probs=66.7
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCC--CcceEEEEecC---Cc--eee-cCCCeeeecCCCCCCCCCc
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLP--VLTQMFVMKLP---TD--LIA-TDESVCLDVPEYENDISPR 586 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~--~~nQ~w~~~~~---~g--~i~-~~~~~CLd~~~~~~~~g~~ 586 (605)
-.|++.++++|||+.+... .+|++|++|+| ++. ..+|+|.++.. .+ .|+ ..+++||++..+...+|++
T Consensus 7 Y~I~n~~s~~~ldv~~~~~---~~G~~v~~w~~-~~~~~~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~ 82 (154)
T d2ihoa1 7 YHIENAGVPSAIDLKDGSS---SDGTPIVGWQF-TPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTA 82 (154)
T ss_dssp EEEEESSSSCEEEEGGGCC---STTEEEEEECC-CTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEE
T ss_pred EEEEECCCCCEEEeCCCCC---CCCCEEEEEec-CCCCCCcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcE
Confidence 3689999999999987766 67999999999 553 24899999622 23 333 3568999999888788999
Q ss_pred eEEEeCCCC---CCcceEeC
Q psy10463 587 VRILACSGF---NRQRWTYD 603 (605)
Q Consensus 587 v~l~~C~~~---~~Q~W~~~ 603 (605)
|.++.|++. .+|+|.+.
T Consensus 83 v~~~~~~~~~~~~~Q~W~~~ 102 (154)
T d2ihoa1 83 VNGWQGTAFTTNPHQLWTIK 102 (154)
T ss_dssp EEEECCCTTCCCGGGCEEEE
T ss_pred EEEEeecccCCCcccEEEEc
Confidence 999998753 38999875
|
| >d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Cytolethal distending toxin subunit A species: Haemophilus ducreyi [TaxId: 730]
Probab=98.80 E-value=2.4e-09 Score=95.95 Aligned_cols=81 Identities=20% Similarity=0.319 Sum_probs=64.0
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC-Cc--eee-cCCCeeeecCCCCCCCCCceEE
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP-TD--LIA-TDESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~-~g--~i~-~~~~~CLd~~~~~~~~g~~v~l 589 (605)
+-+|+|..+++|||+. |+.|.+++| +....+|+|.+... +| +|+ ..+++|||+.+.++.+|+.|.+
T Consensus 70 ~~~i~N~~sg~CLd~~---------g~~v~q~~C-~~~~~~Q~W~~~~~~~G~~~i~n~~sg~CLdv~~~st~~G~~v~~ 139 (167)
T d1sr4a_ 70 YFRFVNQSLGTCVEAY---------GNGLIHDIC-SLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNPVSTTFYSTVTL 139 (167)
T ss_dssp CEEEEETTTCCEEEEE---------TTEEEEECC-CTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECSSCSSSCBCEEE
T ss_pred EEEEEECCCCcEEecC---------CCcEEEEec-CCCChHHeEEEEEecCceEEEEeccccEEEEecCCCCCCCCEEEE
Confidence 3478999999999975 356899999 54467899998632 23 455 4578999999988888999999
Q ss_pred EeCCCCC----CcceEeCC
Q psy10463 590 LACSGFN----RQRWTYDK 604 (605)
Q Consensus 590 ~~C~~~~----~Q~W~~~~ 604 (605)
++|++.. +|+|.+..
T Consensus 140 ~~C~~~~~~n~~QqW~i~p 158 (167)
T d1sr4a_ 140 SVCDGATEPSRDQTWYLAP 158 (167)
T ss_dssp ECCCCCEETTEECCEEEEC
T ss_pred EecCCCCCCChhhcEEEeC
Confidence 9999765 49999753
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=98.78 E-value=2.7e-09 Score=92.90 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=66.1
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCC---c--eee--cCCCeeeecCCCCCCCCCc
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPT---D--LIA--TDESVCLDVPEYENDISPR 586 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~---g--~i~--~~~~~CLd~~~~~~~~g~~ 586 (605)
+-.|++..+++||+.... .|+.|.+|+| ++ ..+|+|.+.... | .|+ .++++|||+.++.+++|+.
T Consensus 48 ~y~i~~~~~~~~l~~~~~------~g~~v~~~~~-~~-~~~Q~W~i~~~~~~~g~y~i~~~~~s~~~Ldv~~~~~~nGt~ 119 (138)
T d1qxma2 48 AYTLKCQENNRYLTWIQN------SNNYVETYQS-TD-SLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTH 119 (138)
T ss_dssp EEEEEETTTTEEEEECCS------TTCBEEEECC-CS-SGGGCEEEEEETTEEEEEEEEETTCTTEEEEEGGGCCSTTCB
T ss_pred EEEEEeCCCCCEEccccC------CCcEEEEEcC-CC-ChhcEEEEeccccCCCcEEEEEecCCCccEEECCCCcCCCCE
Confidence 347888889999998643 4689999999 55 679999975211 2 344 2468999999988889999
Q ss_pred eEEEeCCCCCCcceEeCC
Q psy10463 587 VRILACSGFNRQRWTYDK 604 (605)
Q Consensus 587 v~l~~C~~~~~Q~W~~~~ 604 (605)
|.+++|++..+|+|.+++
T Consensus 120 v~~~~~~g~~nQ~W~l~~ 137 (138)
T d1qxma2 120 VIVDSYHGNTNQQWIINL 137 (138)
T ss_dssp EEEEECCCSGGGCEEEEE
T ss_pred EEEECCCCCccceEEEEE
Confidence 999999998899999863
|
| >d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=98.77 E-value=3.8e-09 Score=91.34 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=61.8
Q ss_pred cccccccccccccccccCCCCCCCCCCeEEeecCCCC-CcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLP-VLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~-~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.+++ .++|||..+. ..|+.|.++.| ++. ..+|.|.+. ..|.|.+ .+++|||+.+. .+|+.|.+++|
T Consensus 53 g~~~~--~~~~l~~~~~-----~~g~~v~~~~c-~~~~~~~q~w~~~-~~g~i~~~~sg~cLd~~~~--~~g~~v~~~~c 121 (133)
T d1hwmb1 53 KTIRS--MGKCMTANGL-----NSGSYIMITDC-STAAEDATKWEVL-IDGSIINPSSGLVMTAPSG--ASRTTLLLENN 121 (133)
T ss_dssp SCEEE--TTEEEEESSS-----STTCBEEEECT-TTSCTTSSCCEEE-TTTEEECTTTCCEEECSCS--STTCBCEEECC
T ss_pred ccEEE--eeeecccCCC-----CCCCeeEEEec-CCCCCceeEEEEc-CCCCEEccCCCeEeecccC--CCCCEEEEEcC
Confidence 56665 5799998654 34789999999 443 457999999 7787775 57899999764 45889999999
Q ss_pred CCCCCcceEeC
Q psy10463 593 SGFNRQRWTYD 603 (605)
Q Consensus 593 ~~~~~Q~W~~~ 603 (605)
++..+|+|.+.
T Consensus 122 ~g~~~Q~W~~~ 132 (133)
T d1hwmb1 122 IHAASQGWTVS 132 (133)
T ss_dssp CCCGGGCCEEE
T ss_pred CCCcccceeCC
Confidence 98779999975
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=98.72 E-value=3.8e-09 Score=93.77 Aligned_cols=85 Identities=9% Similarity=0.146 Sum_probs=66.4
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCC--CCcceEEEEecC-Cc---eee-cCCCeeeecCCCCCCCCCceE
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHL--PVLTQMFVMKLP-TD---LIA-TDESVCLDVPEYENDISPRVR 588 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~--~~~nQ~w~~~~~-~g---~i~-~~~~~CLd~~~~~~~~g~~v~ 588 (605)
.|++..+++|||+..... .+|++|.+|.| ++ ...+|+|.++.. .| .|+ ..+++|||+.++.+++|+.+.
T Consensus 60 ~i~n~~s~~~l~~~~~~~---~~g~~v~~~~~-~~~~~~~~Q~W~~~~~~~g~~y~i~n~~sg~~Ldv~~~~~~~gt~i~ 135 (154)
T d2ihoa1 60 TLCNLFSGTYMDLYNGSS---EAGTAVNGWQG-TAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIA 135 (154)
T ss_dssp EEEETTTCCEEEEGGGCC---STTEEEEEECC-CTTCCCGGGCEEEEECTTSSSEEEEETTTCCEEEEGGGCCSTTEEEE
T ss_pred EEEEcCCCeEEeccCCcC---CCCcEEEEEee-cccCCCcccEEEEccCCCcceEEEEEcCCCcEEEcCCCCcCCCcEEE
Confidence 688888999999887665 57899999998 33 357999998732 23 344 457899999888888899999
Q ss_pred EEeCC---CCCCcceEeCC
Q psy10463 589 ILACS---GFNRQRWTYDK 604 (605)
Q Consensus 589 l~~C~---~~~~Q~W~~~~ 604 (605)
+|+|. ++.+|+|.|++
T Consensus 136 ~w~~~~~~g~~~Q~W~f~~ 154 (154)
T d2ihoa1 136 GWTGTWDEGNPHQKWYFNR 154 (154)
T ss_dssp EECCCSSCCCGGGCEEEEE
T ss_pred EEecccCCCCccceEEEeC
Confidence 99994 33499999863
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=98.52 E-value=6.2e-08 Score=84.53 Aligned_cols=77 Identities=8% Similarity=0.029 Sum_probs=59.9
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC--Cc--eeec--CCCeeeecCCCCCCCCCce
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP--TD--LIAT--DESVCLDVPEYENDISPRV 587 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~--~g--~i~~--~~~~CLd~~~~~~~~g~~v 587 (605)
+-+|++..++.|+++.. .+|+.+.+|.| ++ ..+|+|.+... +| .|+. .+++|||+.+ |+.|
T Consensus 55 ~Y~I~~~~s~~~l~~~~------~~g~~v~~~~~-~g-~~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~g-----g~~v 121 (145)
T d1qxma1 55 AYKIKVMDNTSLILTWN------APLSSVSVKTD-TN-GDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNI-----DDTL 121 (145)
T ss_dssp EEEEEESSSSCCEEEEC------TTSSCEEEECC-CC-CGGGCEEEEECTTTCCEEEEESSCTTEEEEECT-----TSCE
T ss_pred EEEEEECCCCCEEEecc------CCCceEEEEcC-CC-CchheEEEeecCCCCEEEEEEccCCCEEEEecC-----CceE
Confidence 34788888889998754 34789999999 55 78999987422 33 3553 4689999976 5689
Q ss_pred EEEeCCCCCCcceEeC
Q psy10463 588 RILACSGFNRQRWTYD 603 (605)
Q Consensus 588 ~l~~C~~~~~Q~W~~~ 603 (605)
++|+|+++.+|+|+|+
T Consensus 122 ~~~~~~g~~nQ~w~~~ 137 (145)
T d1qxma1 122 MVSTQTSSSNQFFKFS 137 (145)
T ss_dssp EEEECCSCGGGCEEEE
T ss_pred EEeCCCCCcccEEEEe
Confidence 9999999999999985
|
| >d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: N-acetylglucosaminyltransferase I domain: N-acetylglucosaminyltransferase I species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.35 E-value=1e-05 Score=79.35 Aligned_cols=190 Identities=15% Similarity=0.168 Sum_probs=113.8
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC---------
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--------- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--------- 267 (605)
++.+-|+|.+||++ . +.++|+++++..+.....+|+|.-||+.++. .+.+..+. ..+.++....
T Consensus 1 ~~viPVlv~a~NRP-~-l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~-~~~v~~~~----~~v~~I~~~~~~~~~~~~~ 73 (343)
T d1fo8a_ 1 LAVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET-AQVIASYG----SAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH-HHHHHTTG----GGSEEEECSCCCCCCCCTT
T ss_pred CCcccEEEEEcCHH-H-HHHHHHHHHhcCccccCccEEEEecCCchhH-HHHHHHHH----HHHHHhcCCccccceecch
Confidence 46688999999997 5 8999999998865554478999999988763 33333332 2455554332
Q ss_pred ------CCChHHH----HHHHHhhccCCEEEEecCCcccCcChH---HHHHHHHHcCCcE-EEeeeEeeecCCeeEEecc
Q psy10463 268 ------RVGLIKA----RLLGARQAEGEILVFLDAHCECTLGWL---ENLVARVAEDRTR-VVCPVIDIISDVTFAYVRS 333 (605)
Q Consensus 268 ------n~G~~~a----rN~G~~~A~gd~i~flD~D~~~~~~~L---~~ll~~~~~~~~~-vv~p~i~~i~~~~~~~~~~ 333 (605)
+.|+++. .+.....-..+.+++|.+|+.+.|+++ +.++..++.++.. .+++-- .+
T Consensus 74 ~~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D~~i~~IS~wN----dn------- 142 (343)
T d1fo8a_ 74 HRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWN----DN------- 142 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCC----TT-------
T ss_pred hhcccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcCCCEEEEeccc----cC-------
Confidence 1122222 222222224689999999999999988 4555566666553 332110 00
Q ss_pred cccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHH-HHc
Q psy10463 334 FELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRV-WQC 412 (605)
Q Consensus 334 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl-~~~ 412 (605)
|. .. ......+...+++..+.|-..|+.|+.|+++.. -|...++|.++|. -+.
T Consensus 143 -----G~--------------~~-~~~~~~~~~lyrs~~fpg~GW~~~r~~W~el~~------kwp~~~Wd~w~r~~~~r 196 (343)
T d1fo8a_ 143 -----GK--------------EQ-MVDSSKPELLYRTDFFPGLGWLLLAELWAELEP------KWPKAFWDDWMRRPEQR 196 (343)
T ss_dssp -----CB--------------GG-GSCTTCTTCEEEESSCCCSSEEEEHHHHHHHGG------GCCSSCHHHHHTSHHHH
T ss_pred -----CC--------------cc-cccCCCCceEEeecCCCchhhheeHHHHHHhhh------cCCCCCcHHhhhhHHhc
Confidence 00 00 000112233356667777788999999998752 3455677888883 333
Q ss_pred CCeEEEecc-eEEEEEccc
Q psy10463 413 GGSIEIAPC-SHVAHLFRK 430 (605)
Q Consensus 413 G~~i~~~p~-s~v~H~~r~ 430 (605)
-+|..+.|+ +++.|..+.
T Consensus 197 kgr~cI~PevsRt~~fG~~ 215 (343)
T d1fo8a_ 197 KGRACVRPEISRTMTFGRK 215 (343)
T ss_dssp TTCEEEEESSBSEEECC--
T ss_pred CCCeeeccCccceeeeccc
Confidence 345555555 567776543
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.17 E-value=8.8e-07 Score=76.02 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=61.0
Q ss_pred ccCCCcCCCCCc----cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeee
Q psy10463 501 VWPHHFLPMDDK----FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLD 575 (605)
Q Consensus 501 v~p~~~~p~~~~----~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd 575 (605)
+++|+.....+. ..|+|++.++++||++... .+|.+|.|++| +....+|+|.+. .+..+.. ...+|++
T Consensus 26 l~~C~~~~~~Q~w~~~~~~~l~~~~s~~CL~~~~~-----~~g~~v~l~~C-d~~~~~Q~W~~~-~~~l~~~~~~~l~l~ 98 (134)
T d1dqga_ 26 TATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSK-----TDWASVTLYAC-DSKSEYQKWECK-NDTLFGIKGTELYFN 98 (134)
T ss_dssp EESCCTTCGGGCEEESSSSCEEETTTTEEEECSSS-----CTTCBCEEECC-CTTCTTSCEEEC-STTBEEETTSSCEEE
T ss_pred EEeccCCCcceEEEEcCCCceEecCCCcEEeEeec-----cCCceEEEEEC-CCCCccceeEeC-CCeEEeecCcceEEe
Confidence 567764333321 2478999889999998643 35789999999 665789999997 5555554 3346665
Q ss_pred cCCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 576 VPEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 576 ~~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
.... .+..|++..| +..+|+|...
T Consensus 99 ~~~~---~~~~v~l~~~-~~~~q~W~~~ 122 (134)
T d1dqga_ 99 YGNR---QEKNIKLYKG-SGLWSRWKVY 122 (134)
T ss_dssp CCGG---GCCSCEEESC-CSGGGBCEET
T ss_pred eccC---CCceEEEecC-CcccccceEc
Confidence 4332 2356666655 4457899763
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=98.13 E-value=1.2e-06 Score=76.21 Aligned_cols=75 Identities=15% Similarity=0.056 Sum_probs=54.7
Q ss_pred ccccc-cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec-CC-c--eeec-CCCeeeecCCCCCCCCCceEE
Q psy10463 516 RIRHV-QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL-PT-D--LIAT-DESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 516 ~ir~~-~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~-~~-g--~i~~-~~~~CLd~~~~~~~~g~~v~l 589 (605)
.|+.. .+++|||... ++.|.+|.| ++ +.+|+|.++. .+ | .|+. .+++|+++.. .+|+.|++
T Consensus 13 ~i~~~~Ns~kvlD~~s--------~t~Vq~w~~-~g-~~nQkW~~~~~~~~g~Y~I~~~~s~~~l~~~~---~~g~~v~~ 79 (145)
T d1qxma1 13 FISPSNNTNKVLDKIS--------QSEVKLWNK-LS-GANQKWRLIYDTNKQAYKIKVMDNTSLILTWN---APLSSVSV 79 (145)
T ss_dssp EEEETTCTTEEEEECS--------SSCEEEEEC-CC-CGGGCEEEEEETTTTEEEEEESSSSCCEEEEC---TTSSCEEE
T ss_pred EEEECCCCCeEEEecC--------CCEEEEEcC-CC-ChhheEEEEEcCCCCEEEEEECCCCCEEEecc---CCCceEEE
Confidence 45553 4889999642 578999999 65 7899998752 33 4 3443 4567887643 34789999
Q ss_pred EeCCCCCCcceEeC
Q psy10463 590 LACSGFNRQRWTYD 603 (605)
Q Consensus 590 ~~C~~~~~Q~W~~~ 603 (605)
+.|++..+|+|.+.
T Consensus 80 ~~~~g~~~Q~W~i~ 93 (145)
T d1qxma1 80 KTDTNGDNQYWYLL 93 (145)
T ss_dssp ECCCCCGGGCEEEE
T ss_pred EcCCCCchheEEEe
Confidence 99999889999873
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=98.11 E-value=1.8e-06 Score=74.43 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=57.5
Q ss_pred ccccc-ccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec-CC-c--eee-cCCCeeeecCCCCCCCCCceE
Q psy10463 515 GRIRH-VQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL-PT-D--LIA-TDESVCLDVPEYENDISPRVR 588 (605)
Q Consensus 515 G~ir~-~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~-~~-g--~i~-~~~~~CLd~~~~~~~~g~~v~ 588 (605)
++|.. ..+++|||.. .+|++|.+|.| ++ +.+|+|.+.. .. + .|+ ..+++||++... .|+.|.
T Consensus 4 ~~i~t~~n~~k~l~~~-------~n~~~v~~w~~-~~-~~nQ~W~~~~~~~~~~y~i~~~~~~~~l~~~~~---~g~~v~ 71 (138)
T d1qxma2 4 CKLQTQLNSDRFLSKN-------LNSQIIVLWQW-FD-SSRQKWIIEYNETKSAYTLKCQENNRYLTWIQN---SNNYVE 71 (138)
T ss_dssp EEEEETTCTTCEEEEC-------TTSSBEEEECC-CC-CGGGCEEEEEETTTTEEEEEETTTTEEEEECCS---TTCBEE
T ss_pred eEEEEeeCCCEEEEEc-------cCCceEEEECC-CC-CcccCEEEEECCCcCEEEEEeCCCCCEEccccC---CCcEEE
Confidence 45554 3588999973 34789999999 65 7899999862 22 2 233 356799998753 478999
Q ss_pred EEeCCCCCCcceEeC
Q psy10463 589 ILACSGFNRQRWTYD 603 (605)
Q Consensus 589 l~~C~~~~~Q~W~~~ 603 (605)
+++|++..+|+|.+.
T Consensus 72 ~~~~~~~~~Q~W~i~ 86 (138)
T d1qxma2 72 TYQSTDSLIQYWNIN 86 (138)
T ss_dssp EECCCSSGGGCEEEE
T ss_pred EEcCCCChhcEEEEe
Confidence 999999889999874
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=97.83 E-value=8.2e-06 Score=69.28 Aligned_cols=78 Identities=9% Similarity=-0.023 Sum_probs=59.8
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceee---cCCCeeeecCCCCCCCCCceEEEeC
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIA---TDESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~---~~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
.|+|+.+|+||++.+.. .+..+..++| .+ ..+|+|.+...+|..+ ..+++|||+.+.. |+.+..+.+
T Consensus 4 ~I~N~~sGk~L~v~~~~-----~~~~~~~~~~-~~-~~~qqW~~~~~~g~y~i~n~~sg~~l~~~~~s---g~~~~~~~~ 73 (131)
T d1upsa2 4 LIRNRQTGKFLYIEENN-----DKVSYGDITL-KN-EKNAKWSKEYRDGYTLLKNNETGEYLNIENQT---GYIEHGKVP 73 (131)
T ss_dssp EEEETTTCCEEECCTTC-----SSCEEECCCT-TT-TGGGCEEEEEETTEEEEEETTTCCEEECTTCC---SBCEEECCC
T ss_pred EEEEccCCcEEEEeCCC-----CcEEEecccc-CC-CcccEEEEEeCCCEEEEEECCCCcEEEccCCC---CceEEEccC
Confidence 58899999999986532 3567778899 44 6789999875566543 3678999997643 678899999
Q ss_pred CCCCCcceEeC
Q psy10463 593 SGFNRQRWTYD 603 (605)
Q Consensus 593 ~~~~~Q~W~~~ 603 (605)
++..+|+|.+.
T Consensus 74 ~~~~~qqW~l~ 84 (131)
T d1upsa2 74 KTWWSAQWSEV 84 (131)
T ss_dssp TTCGGGCEEEE
T ss_pred CCChhHeEEEE
Confidence 98889999874
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=97.44 E-value=6.8e-05 Score=63.41 Aligned_cols=79 Identities=4% Similarity=-0.058 Sum_probs=59.8
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceee---c-CCCeeeecCCCCCCCCCceEE
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIA---T-DESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~---~-~~~~CLd~~~~~~~~g~~v~l 589 (605)
+-+|+|.++++|||+.+. .|+.+..+++ ++ ..+|+|.+...+|..+ . .+++||++.+. .|..+..
T Consensus 46 ~y~i~n~~sg~~l~~~~~------sg~~~~~~~~-~~-~~~qqW~l~~~gg~~~i~n~~~s~~~L~v~~~---sG~~~~~ 114 (131)
T d1upsa2 46 YTLLKNNETGEYLNIENQ------TGYIEHGKVP-KT-WWSAQWSEVPVDGYTRFVNRWKPNMSIHTESY---EGVLQYG 114 (131)
T ss_dssp EEEEEETTTCCEEECTTC------CSBCEEECCC-TT-CGGGCEEEEEETTEEEEEESSSTTCEEECTTC---CSBCEEE
T ss_pred EEEEEECCCCcEEEccCC------CCceEEEccC-CC-ChhHeEEEEecCCcEEEEEeccCCeEEEEecC---Ccceeee
Confidence 347999999999999753 3578889998 44 5789999874455433 2 46799999863 3667778
Q ss_pred EeCCCCCCcceEeC
Q psy10463 590 LACSGFNRQRWTYD 603 (605)
Q Consensus 590 ~~C~~~~~Q~W~~~ 603 (605)
+.+.+..+|+|.+.
T Consensus 115 ~~~~~~~~qqW~l~ 128 (131)
T d1upsa2 115 NVPNTYWTSQWQLI 128 (131)
T ss_dssp CCCTTCGGGCEEEE
T ss_pred eccCCCcCccEEEE
Confidence 88887779999985
|
| >d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Cytolethal distending toxin subunit A species: Haemophilus ducreyi [TaxId: 730]
Probab=97.14 E-value=0.00021 Score=62.94 Aligned_cols=46 Identities=11% Similarity=0.063 Sum_probs=34.2
Q ss_pred CcceEEEEec--CCce--ee-cCCCeeeecCCCCCCCCCceEEEeCCCCC-CcceEeC
Q psy10463 552 VLTQMFVMKL--PTDL--IA-TDESVCLDVPEYENDISPRVRILACSGFN-RQRWTYD 603 (605)
Q Consensus 552 ~~nQ~w~~~~--~~g~--i~-~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q~W~~~ 603 (605)
+.+|+|++.. ..|. |+ ..+++|||+.+ +.|++++|+.++ +|+|.+.
T Consensus 55 g~~Q~W~~~~~~~~g~~~i~N~~sg~CLd~~g------~~v~q~~C~~~~~~Q~W~~~ 106 (167)
T d1sr4a_ 55 GNIRNWKMEPGKHREYFRFVNQSLGTCVEAYG------NGLIHDICSLDKLAQEFELL 106 (167)
T ss_dssp GGGGCEEEEECSSTTCEEEEETTTCCEEEEET------TEEEEECCCTTCGGGCEEEE
T ss_pred CccceEEEEecCCCCEEEEEECCCCcEEecCC------CcEEEEecCCCChHHeEEEE
Confidence 4689999853 2333 33 36789999874 469999998766 9999984
|
| >d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: N-acetylglucosaminyltransferase I domain: N-acetylglucosaminyltransferase I species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.78 E-value=0.019 Score=55.52 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=64.6
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC---------
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--------- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~--------- 159 (605)
||-+-|+|.+||.. . +.+||+|+++.-+....++|+|.-||+.+++.+ .+..+ ...+..+....
T Consensus 1 ~~viPVlv~a~NRP-~-l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~~~-~v~~~----~~~v~~I~~~~~~~~~~~~~ 73 (343)
T d1fo8a_ 1 LAVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQ-VIASY----GSAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHH-HHHTT----GGGSEEEECSCCCCCCCCTT
T ss_pred CCcccEEEEEcCHH-H-HHHHHHHHHhcCccccCccEEEEecCCchhHHH-HHHHH----HHHHHHhcCCccccceecch
Confidence 45677999999996 4 899999999886655447899999999887632 22332 22344433221
Q ss_pred ------CcchHHHHHHHhhh----ccCceEEEecCccccccccc
Q psy10463 160 ------RVGLIKARLLGARQ----AEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 160 ------~~G~~~a~n~g~~~----a~g~~i~~lD~d~~~~~~~~ 193 (605)
+.|++...-.|+.. .+.+.+++|+-|+++.+++.
T Consensus 74 ~~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf 117 (343)
T d1fo8a_ 74 HRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFF 117 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHH
T ss_pred hhcccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHH
Confidence 23333333334443 34689999999998876653
|
| >d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: beta 1,4 galactosyltransferase (b4GalT1) domain: beta 1,4 galactosyltransferase (b4GalT1) species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.34 E-value=0.29 Score=45.41 Aligned_cols=70 Identities=23% Similarity=0.273 Sum_probs=49.6
Q ss_pred cEEEEEEeecCchHHHH---HHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHH
Q psy10463 91 KSSIVIVFHNEAWSALL---RTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 167 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~---~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~ 167 (605)
+++||||..|.+ +.|. .-++.+++..-.+ ++|+||+...+.. .-.+...
T Consensus 50 kvaIIIPyRdR~-~hL~~fl~~l~~~L~~q~~~--y~I~vieQ~~~~~-------------------------FNRg~ll 101 (271)
T d1pzta_ 50 KVAIIIPFRNRQ-EHLKYWLYYLHPILQRQQLD--YGIYVINQAGESM-------------------------FNRAKLL 101 (271)
T ss_dssp EEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSC-------------------------CCHHHHH
T ss_pred eEEEEEecCChH-HHHHHHHHHHHHHHHhcCCC--EEEEEEeccCCcc-------------------------hhhhhhh
Confidence 699999999998 5554 5556666554333 7999999866543 3456777
Q ss_pred HHHhhhcc----CceEEEecCcccc
Q psy10463 168 LLGARQAE----GEILVFLDAHCEC 188 (605)
Q Consensus 168 n~g~~~a~----g~~i~~lD~d~~~ 188 (605)
|.|...|. .++++|.|-|.-+
T Consensus 102 NiGf~~a~~~~~~~~~ifHDVDllP 126 (271)
T d1pzta_ 102 NVGFKEALKDYDYNCFVFSDVDLIP 126 (271)
T ss_dssp HHHHHHHHHHSCCCEEEEECTTEEE
T ss_pred hHHHHHhhhccCccEEEEecCCcCc
Confidence 88887763 4668888888743
|
| >d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: 1,3-glucuronyltransferase domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.03 E-value=0.55 Score=42.60 Aligned_cols=110 Identities=20% Similarity=0.275 Sum_probs=63.7
Q ss_pred CCcceEEEEeechhhH--HHHHHHHHHHhcCCCCCceeEEEeeCCC-ChHHHHHHHHHHHHHCCCCEEEEeCCCC-----
Q psy10463 197 LPKSSIVIVFHNEAWS--ALLRTVHSVISRSPRSMLKEILLVDDAS-TREFLKSSLDEYVAKLSVPTRVIRSPGR----- 268 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~--~l~~~l~sl~~q~~~~~~~eIIvVDd~S-~d~~~~~~l~~~~~~~~~~v~~i~~~~n----- 268 (605)
+|.|=||.|||.+... .|.+.-+.+. .-+ . .--|||+|+. ..+.+. ++.++.+...+.+..+..
T Consensus 1 lp~I~vVTPTy~R~~Q~~~LtRLa~TL~-lVp-~--l~WIVVEda~~~t~~va----~lL~~sgl~y~HL~~~~p~~~~~ 72 (252)
T d1v82a_ 1 LPTIHVVTPTYSRPVQKAELTRMANTLL-HVP-N--LHWLVVEDAPRRTPLTA----RLLRDTGLNYTHLHVETPRNYKL 72 (252)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHT-TCS-S--EEEEEEESSSSCCHHHH----HHHHHHCCEEEEEECCCCHHHHC
T ss_pred CCCEEEECCCCCchhhHHHHHHHHhHHh-cCC-C--ceEEEEeCCCCCCHHHH----HHHHHcCCceEeeccCCCccccc
Confidence 5888999999999832 3455555543 333 3 5788888754 323233 344444423333322211
Q ss_pred ----------CChHHHHHHHHhhc---------cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeee
Q psy10463 269 ----------VGLIKARLLGARQA---------EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPV 319 (605)
Q Consensus 269 ----------~G~~~arN~G~~~A---------~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~ 319 (605)
.| ...||.|++.- .--++.|.|+|...+-..+++ +..-....+-|+
T Consensus 73 ~~~~~~~~~~rg-~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFde----mR~ik~vgvWPV 137 (252)
T d1v82a_ 73 RGDARDPRIPRG-TMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEE----MRSTRRVSVWPV 137 (252)
T ss_dssp CC-----CCCTT-HHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHH----HTTCSSEEECCE
T ss_pred cccccccccccc-HHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHH----HhhcceEEEEee
Confidence 12 24689998744 236999999999887766555 444334444443
|
| >d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Cytidylytransferase domain: CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase species: Escherichia coli, KpsU [TaxId: 562]
Probab=86.71 E-value=3.8 Score=36.24 Aligned_cols=187 Identities=13% Similarity=0.089 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEec
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLD 291 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD 291 (605)
+.+..+++.+.+-..- .+|+|+-|. .. +......+...+ +++.+...+-......++..-..|+++.++
T Consensus 28 Pli~~~i~~a~~~~~~---d~Iiv~td~---~~----i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~vv~l~ 96 (245)
T d1h7ea_ 28 PMIQHVYERALQVAGV---AEVWVATDD---PR----VEQAVQAFGGKA-IMTRNDHESGTDRLVEVMHKVEADIYINLQ 96 (245)
T ss_dssp EHHHHHHHHHHTCTTC---CEEEEEESC---HH----HHHHHHHTTCEE-EECCSCCSSHHHHHHHHHHHSCCSEEEECC
T ss_pred cHHHHHHHHHHhCCCC---CeEEEeccc---cc----chhhhhhcCceE-EEecCccccccHHHHHHHHhcCCCEEEEec
Confidence 4566777766654432 377776432 21 233444554223 333344344455556666777899999999
Q ss_pred CCccc-CcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccce-eeEeecCchhHhhhccCCCCccc
Q psy10463 292 AHCEC-TLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELH-FRWYTYGSSDAIIKRKDFTEPFK 369 (605)
Q Consensus 292 ~D~~~-~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~ 369 (605)
+|..+ ++..+..++..+...................+. .. ... .....-... ..+....... .......
T Consensus 97 ~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v-k~~~~~~~~~~~~~~~~~~~------~~~~~~~ 167 (245)
T d1h7ea_ 97 GDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAA-EP-STV-KVVVNTRQDALYFSRSPIPY------PRNAEKA 167 (245)
T ss_dssp TTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHT-CT-TSC-EEEECTTCBEEEEESSCSSC------CTTGGGC
T ss_pred chhhhcccccchhhhhccccccccccccccccccccccc-CC-cce-eeccchhhhhhhhhhhhhhh------hhccccc
Confidence 99875 678889998888765432111111000000000 00 000 000000000 0000000000 0000011
Q ss_pred cccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEec
Q psy10463 370 TPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 370 ~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
.....+|.++++++.+.+...|.+...- -.|.+|+ +|+...|+++..+.
T Consensus 168 ~~~~~~g~~~~~~~~l~~~~~~~~s~~e-~~e~ie~-lr~l~ng~~I~~~~ 216 (245)
T d1h7ea_ 168 RYLKHVGIYAYRRDVLQNYSQLPESMPE-QAESLEQ-LRLMNAGINIRTFE 216 (245)
T ss_dssp CEEEEEEEEEEEHHHHHHGGGSCCCHHH-HHHTCTT-HHHHHTTCCEEEEE
T ss_pred ccceeeeeEEeeeccccccccccCChhh-hhhhHHH-HHHHHCCCeEEEEE
Confidence 1234567889999999988766543211 2466666 48888999986653
|
| >d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: 1,3-glucuronyltransferase domain: 1,3-Glucuronyltransferase I (glcAT-I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.07 E-value=2.8 Score=37.83 Aligned_cols=97 Identities=15% Similarity=0.143 Sum_probs=57.5
Q ss_pred cceEEEEeechhh--HHHHHHHHHHHhcCCCCCceeEEEeeCCCC-hHHHHHHHHHHHHHCCCCEEEEeCCCC-------
Q psy10463 199 KSSIVIVFHNEAW--SALLRTVHSVISRSPRSMLKEILLVDDAST-REFLKSSLDEYVAKLSVPTRVIRSPGR------- 268 (605)
Q Consensus 199 ~vSVIIp~~n~~~--~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~-d~~~~~~l~~~~~~~~~~v~~i~~~~n------- 268 (605)
+|=||-|||-+.. ..|.+.-+.+..- + + .--|||+|+.. .+.+ .++.++.+...+.+..+..
T Consensus 2 TIyvVTPTY~R~~Q~a~LtRLa~TL~lV-p-~--l~WIVVEDa~~~t~~v----~~lL~~sgl~y~HL~~~tp~~~~~~~ 73 (261)
T d3cu0a1 2 TIYVVTPTYARLVQKAELVRLSQTLSLV-P-R--LHWLLVEDAEGPTPLV----SGLLAASGLLFTHLVVLTPKAQRLRE 73 (261)
T ss_dssp EEEEEEEECCSTTHHHHHHHHHHHHTTS-S-S--EEEEEEESSSSCCHHH----HHHHHHHCSEEEEEECCCC-------
T ss_pred eEEEECCCCCCchhHHHHHHHHHHHhcC-C-C--eeEEEEECCCCCCHHH----HHHHHHcCCceEEeecCCchhhcccc
Confidence 4567889999872 2445555544433 3 3 57888876643 2323 3444444433333332211
Q ss_pred --------CChHHHHHHHHhhcc-----------------CCEEEEecCCcccCcChHHHH
Q psy10463 269 --------VGLIKARLLGARQAE-----------------GEILVFLDAHCECTLGWLENL 304 (605)
Q Consensus 269 --------~G~~~arN~G~~~A~-----------------gd~i~flD~D~~~~~~~L~~l 304 (605)
.| ...||.|++.-+ .-++.|.|+|...+-..+++|
T Consensus 74 ~~~~~~~prg-v~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~em 133 (261)
T d3cu0a1 74 GEPGWVHPRG-VEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 133 (261)
T ss_dssp ----CCCCCS-HHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cCcccccccC-HHHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHH
Confidence 12 247999987764 368999999999887766664
|