Psyllid ID: psy10470

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MLPPWPRFEPSTSGLRVSALDSLDHSATEVGRTSTWMILIAYTQNSCQLYTKFRGKDSRKERREGERVITSSESKNSTACRRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK
Secondary Structure (PSIPRED)
ccccccccccccccccEEEcccccccccccccccEEEEEHHHccccccHHHHHcccccHHHHHHcccEEccccccccHHHHHHHHHHHHHHHHHHHHcHHccccccHHccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEccccccccccccccHHHHHHHHHHHccccEEEEEEcccccHHHHccccEEEEEcccccccHHHHHHHccccccEEEEccEEEccHHHHHHHHcccHHHHHHHHHHHHHcccccEHHHHHccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mlppwprfepstsglrvsaldsldhsatevgrTSTWMILIAYTQNSCQLYTKfrgkdsrkerregervitssesknstACRRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRlscafkskifgkpgmldfkgkAKWEAWesrkgrskpgmldfkgkAKWEAWesrkgqskdDAQAAYIAKVVELVAKYGKK
Flexible Loop (DISEMBL)
mlppwprfepstsglrvsaLDSLDHSATEVGRTSTWMILIAYTQNSCQLYtkfrgkdsrkerregervitssesknstacrRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRlscafkskifgkpgmldfKGKAKWEAwesrkgrskpgmldfkGKAKWEAWEsrkgqskddaqAAYIAKVVELVAKYGKK
Low Complexity Region (SEG)
MLPPWPRFEPSTSGLRVSALDSLDHSATEVGRTSTWMILIAYTQNSCQLYTKFRGKDSRKERREGERVITSSESKNSTACRRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK
Disordered region (IsUnstruct)
****************************EVGRTSTWMILIAYTQNSCQLYTKF*************************ACRRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAW***********************************AAYIAKVVELVAK****
Disordered Region (DISOPRED)
**PPWPRFEPSTSGLRVSALDSLDHSATEVGRTSTWMILIAYTQNSCQLYTK********************************QSVGNNFLCSYVGAKISGK****************************************GMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG**
Disordered Region (DISEMBL)
MLPPWPRFEPSTSGLRVSALDSLDHSATEVGRTSTWMILIAYTQNSCQLYTKFR*************************CRRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKW**************QAAYIAKVVELVAKYGKK
Disordered Region (DISPRO)
*LPPWPRF*PSTSGLRVS*L*SLDHSATEVGRTSTWMILIAYTQNSCQLYTKFRGKD**********VITS**SKNSTACRRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLPPWPRFEPSTSGLRVSALDSLDHSATEVGRTSTWMILIAYTQNSCQLYTKFRGKDSRKERREGERVITSSESKNSTACRRFCQSVGNNFLCSYVGAKISGKDLAYLRANNSGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	209	2.2.26 [Sep-21-2011]
O01805	86	Acyl-CoA-binding protein	yes	N/A	0.210	0.511	0.681	3e-11
Q9PRL8	86	Acyl-CoA-binding protein	yes	N/A	0.210	0.511	0.681	3e-10
P07107	87	Acyl-CoA-binding protein	yes	N/A	0.210	0.505	0.681	1e-09
P45883	88	Acyl-CoA-binding protein	N/A	N/A	0.200	0.477	0.642	2e-09
P82934	87	Acyl-CoA-binding protein	N/A	N/A	0.210	0.505	0.659	3e-09
P07108	87	Acyl-CoA-binding protein	no	N/A	0.210	0.505	0.659	3e-09
Q8N6N7	88	Acyl-CoA-binding domain-c	no	N/A	0.200	0.477	0.666	4e-09
P45882	103	Acyl-CoA-binding protein	N/A	N/A	0.200	0.407	0.666	6e-09
Q3SZF0	88	Acyl-CoA-binding domain-c	no	N/A	0.200	0.477	0.642	2e-08
P12026	87	Acyl-CoA-binding protein	no	N/A	0.210	0.505	0.636	2e-08

>sp|O01805|ACBP1_CAEEL Acyl-CoA-binding protein homolog 1 OS=Caenorhabditis elegans GN=acbp-1 PE=3 SV=1

 Score = 68.6 bits (166), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 35/44 (79%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            KPGM D KGKAKW AW+ +KG +KDDAQ AY+A V EL+AKYG
Sbjct: 42  DKPGMFDLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85

Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters.
Caenorhabditis elegans (taxid: 6239)

>sp|Q9PRL8|ACBP_CHICK Acyl-CoA-binding protein OS=Gallus gallus GN=DBI PE=1 SV=1

 Score = 65.5 bits (158), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 35/44 (79%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGMLDFKGKAKW+AW + KG SK+DA  AY+AKV EL  KYG
Sbjct: 42  DRPGMLDFKGKAKWDAWNALKGMSKEDAMKAYVAKVEELKGKYG 85

Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters.

Gallus gallus (taxid: 9031)

>sp|P07107|ACBP_BOVIN Acyl-CoA-binding protein OS=Bos taurus GN=DBI PE=1 SV=2

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 33/44 (75%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGMLDFKGKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 43  ERPGMLDFKGKAKWDAWNELKGTSKEDAMKAYIDKVEELKKKYG 86

Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters. It is also able to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor.

Bos taurus (taxid: 9913)

>sp|P45883|ACBP_PELRI Acyl-CoA-binding protein homolog OS=Pelophylax ridibundus PE=1 SV=2

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 34/42 (80%)

Query: 166 PGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           PGMLD KGKAKW+AW  +KG SK+DA +AY++K  EL+ KYG
Sbjct: 46  PGMLDLKGKAKWDAWNLKKGLSKEDAMSAYVSKAHELIEKYG 87

May play important functions in the control of brain and pituitary activities. May regulate GABA neurotransmission through a paracrine and/or autocrine mechanism. May not bind acyl-CoA esters.

Pelophylax ridibundus (taxid: 8406)

>sp|P82934|ACBP_CHAVI Acyl-CoA-binding protein OS=Chaetophractus villosus GN=DBI PE=1 SV=2

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 33/44 (75%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGMLDFKGKAKW+AW   KG SK+DA  +YI KV EL  KYG
Sbjct: 43  ERPGMLDFKGKAKWDAWNQLKGTSKEDAMKSYIDKVEELKKKYG 86

Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters.

Chaetophractus villosus (taxid: 29080)

>sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2

 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 32/44 (72%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGMLDF GKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 43  ERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYG 86

Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters. It is also able to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor.

Homo sapiens (taxid: 9606)

>sp|Q8N6N7|ACBD7_HUMAN Acyl-CoA-binding domain-containing protein 7 OS=Homo sapiens GN=ACBD7 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 33/42 (78%)

Query: 166 PGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           PGMLD KGKAKWEAW  +KG S +DA +AYI+K  EL+ KYG
Sbjct: 46  PGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAKELIEKYG 87

Binds medium- and long-chain acyl-CoA esters.

Homo sapiens (taxid: 9606)

>sp|P45882|ACBP_ANAPL Acyl-CoA-binding protein OS=Anas platyrhynchos GN=DBI PE=3 SV=1

 Score = 60.8 bits (146), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 32/42 (76%)

Query: 166 PGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           PGMLD KGKAKWEAW  +KG SK+DA  AYI+K   +V KYG
Sbjct: 61  PGMLDLKGKAKWEAWNLKKGISKEDAMNAYISKAKTMVEKYG 102

Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters. It is also able to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor.

Anas platyrhynchos (taxid: 8839)

>sp|Q3SZF0|ACBD7_BOVIN Acyl-CoA-binding domain-containing protein 7 OS=Bos taurus GN=ACBD7 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 32/42 (76%)

Query: 166 PGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           P +LD KGKAKWEAW  +KG SK+DA  AYI+K  EL+ KYG
Sbjct: 46  PALLDLKGKAKWEAWNLQKGLSKEDAMNAYISKAKELIEKYG 87

Binds medium- and long-chain acyl-CoA esters.

Bos taurus (taxid: 9913)

>sp|P12026|ACBP_PIG Acyl-CoA-binding protein OS=Sus scrofa GN=DBI PE=1 SV=2

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 32/44 (72%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PG+LD KGKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 43  ERPGILDLKGKAKWDAWNGLKGTSKEDAMKAYINKVEELKKKYG 86

DBI(32-86) has antibacterial properties.

Sus scrofa (taxid: 9823)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
348526830	88	PREDICTED: acyl-CoA-binding protein homo	0.205	0.488	0.720	5e-10
46520169	87	endozepine [Cyprinus carpio]	0.210	0.505	0.727	5e-10
374463484	88	acyl-CoA binding protein [Onychostoma ma	0.210	0.5	0.727	5e-10
325302436	87	diazepam-binding inhibitor [Carassius au	0.210	0.505	0.727	6e-10
260814787	87	hypothetical protein BRAFLDRAFT_98944 [B	0.210	0.505	0.704	2e-09
209489210	86	hypothetical protein Cbre_JD01.002 [Caen	0.205	0.5	0.720	2e-09
17506027	86	Protein ACBP-1 [Caenorhabditis elegans]	0.210	0.511	0.681	2e-09
157137608	107	diazepam binding inhibitor, putative [Ae	0.220	0.429	0.673	2e-09
145348479	87	predicted protein [Ostreococcus lucimari	0.215	0.517	0.644	3e-09
24582714	90	CG8498 [Drosophila melanogaster] gi|7297	0.220	0.511	0.695	3e-09

>gi|348526830|ref|XP_003450922.1| PREDICTED: acyl-CoA-binding protein homolog [Oreochromis niloticus]

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 38/43 (88%)

Query: 165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           +PGMLD KGKAKW+AWESRKG SK+DA +AYIAK  E+++KYG
Sbjct: 45  RPGMLDLKGKAKWDAWESRKGMSKEDAMSAYIAKAKEVISKYG 87

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|46520169|gb|AAT00460.1| endozepine [Cyprinus carpio]

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           ++PGMLDF GKAKW+AWE++KG SKDDA  AYIAKV EL  KYG
Sbjct: 43  ARPGMLDFTGKAKWDAWEAKKGMSKDDAMKAYIAKVEELKGKYG 86

Source: Cyprinus carpio

Species: Cyprinus carpio

Genus: Cyprinus

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|374463484|gb|AEZ53129.1| acyl-CoA binding protein [Onychostoma macrolepis]

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           ++PGMLDF GKAKWEAWE+++G SKDDA  AYIAKV EL  KYG
Sbjct: 43  ARPGMLDFTGKAKWEAWEAKEGMSKDDATKAYIAKVEELKGKYG 86

Source: Onychostoma macrolepis

Species: Onychostoma macrolepis

Genus: Onychostoma

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|325302436|dbj|BAJ83550.1| diazepam-binding inhibitor [Carassius auratus]

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           ++PGMLDF GKAKW+AWE++KG SKDDA  AYIAKV EL  KYG
Sbjct: 43  ARPGMLDFTGKAKWDAWEAKKGMSKDDAMKAYIAKVEELKGKYG 86

Source: Carassius auratus

Species: Carassius auratus

Genus: Carassius

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260814787|ref|XP_002602095.1| hypothetical protein BRAFLDRAFT_98944 [Branchiostoma floridae] gi|229287401|gb|EEN58107.1| hypothetical protein BRAFLDRAFT_98944 [Branchiostoma floridae]

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 38/44 (86%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           ++PGMLDF GKAKW+AWES+KG S++DA+A YIAKV EL  KYG
Sbjct: 43  ARPGMLDFTGKAKWDAWESKKGMSQEDARAKYIAKVEELKGKYG 86

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|209489210|gb|ACI48995.1| hypothetical protein Cbre_JD01.002 [Caenorhabditis brenneri] gi|341883087|gb|EGT39022.1| CBN-ACBP-1 protein [Caenorhabditis brenneri]

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query: 165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           KPGM D KGKAKW AW+ +KG SKD AQAAY+A V EL+AKYG
Sbjct: 43  KPGMFDLKGKAKWSAWDEQKGTSKDAAQAAYVALVEELIAKYG 85

Source: Caenorhabditis brenneri

Species: Caenorhabditis brenneri

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|17506027|ref|NP_491412.1| Protein ACBP-1 [Caenorhabditis elegans] gi|5902716|sp|O01805.1|ACBP1_CAEEL RecName: Full=Acyl-CoA-binding protein homolog 1; Short=ACBP-1; AltName: Full=Diazepam-binding inhibitor homolog; Short=DBI gi|351059713|emb|CCD67306.1| Protein ACBP-1 [Caenorhabditis elegans]

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 35/44 (79%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            KPGM D KGKAKW AW+ +KG +KDDAQ AY+A V EL+AKYG
Sbjct: 42  DKPGMFDLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85

Source: Caenorhabditis elegans

Species: Caenorhabditis elegans

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|157137608|ref|XP_001664028.1| diazepam binding inhibitor, putative [Aedes aegypti] gi|108869663|gb|EAT33888.1| AAEL013844-PA [Aedes aegypti]

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK 209
            KPG+LDFKGK+KWEAW  RKG S+DDA+ AYIAKV +LV ++G K
Sbjct: 62  DKPGLLDFKGKSKWEAWNGRKGMSQDDAKQAYIAKVAKLVEQHGLK 107

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|145348479|ref|XP_001418675.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578905|gb|ABO96968.1| predicted protein [Ostreococcus lucimarinus CCE9901]

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 38/45 (84%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGK 208
           ++PGM+DFKGKAKW+AW+ R+G SK+DA  AY+A V EL +KYGK
Sbjct: 43  ARPGMMDFKGKAKWDAWKKREGTSKEDAMTAYVALVAELKSKYGK 87

Source: Ostreococcus lucimarinus CCE9901

Species: Ostreococcus 'lucimarinus'

Genus: Ostreococcus

Order: Mamiellales

Class: Mamiellophyceae

Phylum: Chlorophyta

Superkingdom: Eukaryota

>gi|24582714|ref|NP_609187.1| CG8498 [Drosophila melanogaster] gi|7297350|gb|AAF52610.1| CG8498 [Drosophila melanogaster] gi|68051679|gb|AAY85103.1| IP02950p [Drosophila melanogaster] gi|220951202|gb|ACL88144.1| CG8498-PA [synthetic construct] gi|220959924|gb|ACL92505.1| CG8498-PA [synthetic construct]

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 34/46 (73%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK 209
            KPG LDFKGKAKWEAW +RKG S  DAQAAYI KV  L+A  G K
Sbjct: 44  DKPGFLDFKGKAKWEAWNNRKGMSNTDAQAAYITKVKALIAAVGLK 89

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
UNIPROTKB|F1NDC3	87	DBI "Acyl-CoA-binding protein"	0.296	0.712	0.555	5.6e-13
UNIPROTKB|F1NF81	86	DBI "Acyl-CoA-binding protein"	0.296	0.720	0.555	5.6e-13
UNIPROTKB|Q9PRL8	86	DBI "Acyl-CoA-binding protein"	0.296	0.720	0.555	5.6e-13
WB|WBGene00016655	86	acbp-1 [Caenorhabditis elegans	0.205	0.5	0.697	5.6e-13
FB|FBgn0031992	90	CG8498 [Drosophila melanogaste	0.215	0.5	0.711	1.2e-12
ZFIN|ZDB-GENE-040426-1861	87	dbi "diazepam binding inhibito	0.210	0.505	0.681	1.2e-12
UNIPROTKB|P07107	87	DBI "Acyl-CoA-binding protein"	0.205	0.494	0.697	6.4e-12
ZFIN|ZDB-GENE-050913-108	88	acbd7 "acyl-Coenzyme A binding	0.301	0.715	0.5	1.3e-11
UNIPROTKB|Q8N6N7	88	ACBD7 "Acyl-CoA-binding domain	0.200	0.477	0.666	2.2e-11
UNIPROTKB|P07108	87	DBI "Acyl-CoA-binding protein"	0.205	0.494	0.674	2.8e-11

UNIPROTKB|F1NDC3 DBI "Acyl-CoA-binding protein" [Gallus gallus (taxid:9031)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 35/63 (55%), Positives = 41/63 (65%)

Query:   145 MLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVA 204
             MLD     K +A        +PGMLDFKGKAKW+AW + KG SK+DA  AY+AKV EL  
Sbjct:    25 MLDVYSHYK-QATVGDVNTDRPGMLDFKGKAKWDAWNALKGMSKEDAMKAYVAKVEELKG 83

Query:   205 KYG 207
             KYG
Sbjct:    84 KYG 86

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|F1NF81 DBI "Acyl-CoA-binding protein" [Gallus gallus (taxid:9031)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 35/63 (55%), Positives = 41/63 (65%)

Query:   145 MLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVA 204
             MLD     K +A        +PGMLDFKGKAKW+AW + KG SK+DA  AY+AKV EL  
Sbjct:    24 MLDVYSHYK-QATVGDVNTDRPGMLDFKGKAKWDAWNALKGMSKEDAMKAYVAKVEELKG 82

Query:   205 KYG 207
             KYG
Sbjct:    83 KYG 85

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|Q9PRL8 DBI "Acyl-CoA-binding protein" [Gallus gallus (taxid:9031)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 35/63 (55%), Positives = 41/63 (65%)

Query:   145 MLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVA 204
             MLD     K +A        +PGMLDFKGKAKW+AW + KG SK+DA  AY+AKV EL  
Sbjct:    24 MLDVYSHYK-QATVGDVNTDRPGMLDFKGKAKWDAWNALKGMSKEDAMKAYVAKVEELKG 82

Query:   205 KYG 207
             KYG
Sbjct:    83 KYG 85

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

WB|WBGene00016655 acbp-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 30/43 (69%), Positives = 35/43 (81%)

Query:   165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
             KPGM D KGKAKW AW+ +KG +KDDAQ AY+A V EL+AKYG
Sbjct:    43 KPGMFDLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0019915 "lipid storage" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

FB|FBgn0031992 CG8498 [Drosophila melanogaster (taxid:7227)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 32/45 (71%), Positives = 34/45 (75%)

Query:   165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK 209
             KPG LDFKGKAKWEAW +RKG S  DAQAAYI KV  L+A  G K
Sbjct:    45 KPGFLDFKGKAKWEAWNNRKGMSNTDAQAAYITKVKALIAAVGLK 89

GO:0000062 "fatty-acyl-CoA binding" evidence=ISS

GO:0042049 "cellular acyl-CoA homeostasis" evidence=ISS

ZFIN|ZDB-GENE-040426-1861 dbi "diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)" [Danio rerio (taxid:7955)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 30/44 (68%), Positives = 37/44 (84%)

Query:   164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
             ++PGMLDF GKAKW+AW+++KG SK+DA  AYIAKV EL  KYG
Sbjct:    43 ARPGMLDFTGKAKWDAWDAKKGTSKEDAVKAYIAKVEELKGKYG 86

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|P07107 DBI "Acyl-CoA-binding protein" [Bos taurus (taxid:9913)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:   165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
             +PGMLDFKGKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct:    44 RPGMLDFKGKAKWDAWNELKGTSKEDAMKAYIDKVEELKKKYG 86

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0006641 "triglyceride metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0001942 "hair follicle development" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

ZFIN|ZDB-GENE-050913-108 acbd7 "acyl-Coenzyme A binding domain containing 7" [Danio rerio (taxid:7955)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 32/64 (50%), Positives = 40/64 (62%)

Query:   145 MLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVA 204
             +LD  G  K +A        KPGM+D KGKAKW+AW+SRKG S +DA  AYI    + + 
Sbjct:    26 LLDLYGLYK-QAVVGDINIDKPGMIDLKGKAKWDAWDSRKGMSTEDAMKAYITLAKQAIE 84

Query:   205 KYGK 208
             KYGK
Sbjct:    85 KYGK 88

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8N6N7 ACBD7 "Acyl-CoA-binding domain-containing protein 7" [Homo sapiens (taxid:9606)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 28/42 (66%), Positives = 33/42 (78%)

Query:   166 PGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
             PGMLD KGKAKWEAW  +KG S +DA +AYI+K  EL+ KYG
Sbjct:    46 PGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAKELIEKYG 87

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

UNIPROTKB|P07108 DBI "Acyl-CoA-binding protein" [Homo sapiens (taxid:9606)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/43 (67%), Positives = 32/43 (74%)

Query:   165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
             +PGMLDF GKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct:    44 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYG 86

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0001942 "hair follicle development" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006641 "triglyceride metabolic process" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0030156 "benzodiazepine receptor binding" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Y7Z3	ACBP_SCHPO	No assigned EC number	0.6222	0.2153	0.5172	yes	N/A
Q9PRL8	ACBP_CHICK	No assigned EC number	0.6818	0.2105	0.5116	yes	N/A
P07107	ACBP_BOVIN	No assigned EC number	0.6818	0.2105	0.5057	yes	N/A
P31787	ACBP_YEAST	No assigned EC number	0.5111	0.2153	0.5172	yes	N/A
O01805	ACBP1_CAEEL	No assigned EC number	0.6818	0.2105	0.5116	yes	N/A
Q9D258	ACBD7_MOUSE	No assigned EC number	0.6428	0.2009	0.4772	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	209
cd00435	85	cd00435, ACBP, Acyl CoA binding protein (ACBP) bin	3e-18
pfam00887	87	pfam00887, ACBP, Acyl CoA binding protein	1e-16
COG4281	87	COG4281, ACB, Acyl-CoA-binding protein [Lipid meta	2e-13

>gnl|CDD|238248 cd00435, ACBP, Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity

 Score = 75.4 bits (186), Expect = 3e-18
 Identities = 29/44 (65%), Positives = 34/44 (77%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGM D KG+AKW+AW S KG SK+DA  AYIAKV EL+AKY 
Sbjct: 42  ERPGMFDLKGRAKWDAWNSLKGMSKEDAMKAYIAKVEELIAKYA 85

Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected. Length = 85

>gnl|CDD|216174 pfam00887, ACBP, Acyl CoA binding protein

 Score = 71.5 bits (176), Expect = 1e-16
 Identities = 24/44 (54%), Positives = 30/44 (68%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGM D  GKAKW+AW+  KG SK++A   Y+  V ELV KYG
Sbjct: 44  PRPGMFDVIGKAKWDAWKKLKGMSKEEAMKKYVELVEELVEKYG 87

Length = 87

>gnl|CDD|226731 COG4281, ACB, Acyl-CoA-binding protein [Lipid metabolism]

 Score = 63.4 bits (154), Expect = 2e-13
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           KPG  D  G+ K+EAW   KG+S++DA+  YIA V EL AKYG
Sbjct: 44  KPGFFDIVGRYKYEAWAGLKGKSQEDARQEYIALVEELKAKYG 86

Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	209
PTZ00458	90	acyl CoA binding protein; Provisional	99.96
cd00435	85	ACBP Acyl CoA binding protein (ACBP) binds thiol e	99.96
PF00887	87	ACBP: Acyl CoA binding protein; InterPro: IPR00058	99.95
KOG0817|consensus	142		99.93
COG4281	87	ACB Acyl-CoA-binding protein [Lipid metabolism]	99.9
KOG3878|consensus	469		99.34
smart00295	207	B41 Band 4.1 homologues. Also known as ezrin/radix	96.76
PF00373	126	FERM_M: FERM central domain; InterPro: IPR019748 T	95.93
KOG3530|consensus	616		88.07

>PTZ00458 acyl CoA binding protein; Provisional

Probab=99.96  E-value=8.3e-30  Score=194.69  Aligned_cols=86  Identities=22%  Similarity=0.353  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHHHH
Q psy10470        117 RVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYI  196 (209)
Q Consensus       117 ~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmkeYI  196 (209)
                      ..|++|+..+.     +.++.+.++++++|+|||||| |||+|||+.++||+||+++|+||+||++++|||++|||++||
T Consensus         3 ~~F~~A~~~v~-----~~~~~~~~s~d~~L~lYalyK-QAt~G~c~~~~P~~~d~~~raKw~AW~~l~~ms~~eA~~~YI   76 (90)
T PTZ00458          3 DLFEECVSFIN-----SLPKTVNLSVEIKLDLYKYYK-QSTVGNCNIKEPSMFKYQDRKKYEAWKSIENLNREDAKKRYV   76 (90)
T ss_pred             HHHHHHHHHHH-----hCCCCCCCCHHHHHHHHHHHh-hhccCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence            45999999987     344556789999999999999 999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcC
Q psy10470        197 AKVVELVAKYGK  208 (209)
Q Consensus       197 elVeeL~pkyg~  208 (209)
                      ++|+++.|+|+.
T Consensus        77 ~l~~~l~~~w~~   88 (90)
T PTZ00458         77 EIVTELFPNWEK   88 (90)
T ss_pred             HHHHHHhhcccc
Confidence            999999999975

>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity

Probab=99.96  E-value=1.8e-29  Score=189.86  Aligned_cols=85  Identities=42%  Similarity=0.646  Sum_probs=79.1

Q ss_pred             hHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHH
Q psy10470        115 LDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAA  194 (209)
Q Consensus       115 Le~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmke  194 (209)
                      |+..|++|+..+....       ..++++++|+|||||| |||+|||+.++||+||+++++||+||++++|||++|||+.
T Consensus         1 ~~~~F~~A~~~v~~~~-------~~~~~~~~L~lYalyK-QAt~G~~~~~~P~~~d~~~~~K~~AW~~l~~ms~~eA~~~   72 (85)
T cd00435           1 LQEEFEAAAEKVKKLK-------TKPSNEEKLQLYSLYK-QATVGDCNTERPGMFDLKGRAKWDAWNSLKGMSKEDAMKA   72 (85)
T ss_pred             ChHHHHHHHHHHHhCC-------CCcCHHHHHHHHHHHH-HhccCCCCCCCCCcccHhhHHHHHHHHHcCCCCHHHHHHH
Confidence            4578999999987433       4789999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhc
Q psy10470        195 YIAKVVELVAKYG  207 (209)
Q Consensus       195 YIelVeeL~pkyg  207 (209)
                      ||+++++++|+||
T Consensus        73 YV~~~~~l~~~~~   85 (85)
T cd00435          73 YIAKVEELIAKYA   85 (85)
T ss_pred             HHHHHHHHhhccC
Confidence            9999999999997

Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected.

>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters []

Probab=99.95  E-value=1e-28  Score=183.90  Aligned_cols=87  Identities=31%  Similarity=0.543  Sum_probs=75.9

Q ss_pred             hHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHH
Q psy10470        115 LDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAA  194 (209)
Q Consensus       115 Le~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmke  194 (209)
                      |+..|+.|+..+.....     ...++++++|+|||||| |||+|||+.++||++|+++++||+||++++|||++|||++
T Consensus         1 Le~~F~~A~~~v~~~~~-----~~~~~~~~~L~LYalyK-QAt~Gd~~~~~P~~~d~~~~~K~~AW~~l~gms~~eA~~~   74 (87)
T PF00887_consen    1 LEEEFEAAVEFVSNLPK-----KSQLSNDDKLELYALYK-QATHGDCDTPRPGFFDIEGRAKWDAWKALKGMSKEEAMRE   74 (87)
T ss_dssp             HHHHHHHHHHHHHHSSS-----CSTS-HHHHHHHHHHHH-HHHTSS--S-CTTTTCHHHHHHHHHHHTTTTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhccc-----cCCCCHHHHHHHHHHHH-HHHhCCCcCCCCcchhHHHHHHHHHHHHccCCCHHHHHHH
Confidence            67899999999883332     25789999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhc
Q psy10470        195 YIAKVVELVAKYG  207 (209)
Q Consensus       195 YIelVeeL~pkyg  207 (209)
                      ||++|++++++|.
T Consensus        75 Yi~~v~~~~~~~~   87 (87)
T PF00887_consen   75 YIELVEELIPKYE   87 (87)
T ss_dssp             HHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999984

ACBP is also known as diazepam binding inhibitor (DBI) or endozepine (EP) because of its ability to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor []. ACBP is a highly conserved protein of about 90 residues that is found in all four eukaryotic kingdoms, Animalia, Plantae, Fungi and Protista, and in some eubacterial species []. Although ACBP occurs as a completely independent protein, intact ACB domains have been identified in a number of large, multifunctional proteins in a variety of eukaryotic species. These include large membrane-associated proteins with N-terminal ACB domains, multifunctional enzymes with both ACB and peroxisomal enoyl-CoA Delta(3), Delta(2)-enoyl-CoA isomerase domains, and proteins with both an ACB domain and ankyrin repeats (IPR002110 from INTERPRO) []. The ACB domain consists of four alpha-helices arranged in a bowl shape with a highly exposed acyl-CoA-binding site. The ligand is bound through specific interactions with residues on the protein, most notably several conserved positive charges that interact with the phosphate group on the adenosine-3'phosphate moiety, and the acyl chain is sandwiched between the hydrophobic surfaces of CoA and the protein []. Other proteins containing an ACB domain include: Endozepine-like peptide (ELP) (gene DBIL5) from mouse []. ELP is a testis-specific ACBP homologue that may be involved in the energy metabolism of the mature sperm. MA-DBI, a transmembrane protein of unknown function which has been found in mammals. MA-DBI contains a N-terminal ACB domain. DRS-1 [], a human protein of unknown function that contains a N-terminal ACB domain and a C-terminal enoyl-CoA isomerase/hydratase domain. ; GO: 0000062 fatty-acyl-CoA binding; PDB: 2CB8_A 2FJ9_A 2LBB_A 1ST7_A 3EPY_B 2FDQ_C 1NTI_A 1HB8_A 1ACA_A 1NVL_A ....

>KOG0817|consensus

Probab=99.93  E-value=1.5e-26  Score=189.71  Aligned_cols=87  Identities=37%  Similarity=0.583  Sum_probs=80.7

Q ss_pred             hhHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHH
Q psy10470        114 GLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQA  193 (209)
Q Consensus       114 eLe~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmk  193 (209)
                      .+...|++|+..++....       .++++++|+|||||| |||+|||++++||+||++||+||+||++++|||++|||+
T Consensus         4 ~~~~~Fe~a~~~~~~l~~-------~p~~ee~L~lYglyK-QAt~G~~~~~kPg~~d~~~k~Kw~AW~~l~~~s~~eA~~   75 (142)
T KOG0817|consen    4 TLEAKFEAAAEAVKNLKK-------KPSNEELLKLYGLYK-QATVGDCNTPKPGFFDEEGKAKWQAWNSLGGMSKEEAME   75 (142)
T ss_pred             hHHHHHHHHHHHHHhccc-------CCCHHHHHHHHHHHH-hhccCCCCCCCCchhhHHHHHHHHHHHhcCCCCHHHHHH
Confidence            467789999998884444       368999999999999 999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcC
Q psy10470        194 AYIAKVVELVAKYGK  208 (209)
Q Consensus       194 eYIelVeeL~pkyg~  208 (209)
                      .||+++.+++++|+.
T Consensus        76 ~Yv~~~~~l~~~~~~   90 (142)
T KOG0817|consen   76 AYVEKVEELIPKYGA   90 (142)
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999999985

>COG4281 ACB Acyl-CoA-binding protein [Lipid metabolism]

Probab=99.90  E-value=8.2e-24  Score=159.83  Aligned_cols=86  Identities=33%  Similarity=0.495  Sum_probs=77.2

Q ss_pred             hHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHH
Q psy10470        115 LDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAA  194 (209)
Q Consensus       115 Le~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmke  194 (209)
                      +.-.|+.|..-++....       ..+++++|+|||||| |+++||.+..+||+||++|++||+||..|+|.|+++|.++
T Consensus         2 ~s~~Feqa~~dV~~L~~-------kP~~d~LLkLYAL~K-Q~s~GD~~~ekPG~~d~~gr~K~eAW~~LKGksqedA~qe   73 (87)
T COG4281           2 LSTRFEQAQTDVKELSE-------KPSNDELLKLYALFK-QGSVGDNDGEKPGFFDIVGRYKYEAWAGLKGKSQEDARQE   73 (87)
T ss_pred             hhhHHHHHHHHHHHhcc-------CCCcHHHHHHHHHHH-hccccccCCCCCCccccccchhHHHHhhccCccHHHHHHH
Confidence            45579988777763332       457999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcC
Q psy10470        195 YIAKVVELVAKYGK  208 (209)
Q Consensus       195 YIelVeeL~pkyg~  208 (209)
                      ||.+|++|..+|++
T Consensus        74 YialVeeLkak~~~   87 (87)
T COG4281          74 YIALVEELKAKYGT   87 (87)
T ss_pred             HHHHHHHHHhhcCC
Confidence            99999999999984

>KOG3878|consensus

Probab=99.34  E-value=7.2e-13  Score=122.86  Aligned_cols=98  Identities=15%  Similarity=0.164  Sum_probs=89.0

Q ss_pred             ccCchhhHHHHH--HHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCC-CC--CCCChhHHHHHHHHhhC
Q psy10470        109 RANNSGLDRVFR--ALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRS-KP--GMLDFKGKAKWEAWESR  183 (209)
Q Consensus       109 ~~~~~eLe~~Fe--eAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~-kP--G~~D~~graKwnAWkql  183 (209)
                      +++.++.+|+|.  ++|+++-+|++.+.+|..+++++++|+|.+|.| |+.+|++|+. .|  |++|++|+.+..+|..|
T Consensus        20 ea~~~~~~wGf~LeElY~LA~~fyKe~~GKa~h~~YEd~lKLial~k-Qv~~Gp~n~d~~p~~G~lDv~GnDr~~~W~~L   98 (469)
T KOG3878|consen   20 EAPSSAEKWGFPLEELYRLAFTFYKENSGKAIHLSYEDNLKLIALKK-QVALGPFNTDRAPALGVLDVIGNDRQQHWQLL   98 (469)
T ss_pred             hhhhHHHHhCCCHHHHHHHHHHHHHhccCCccCCChhhhhhhhhhHh-hhhcCCCCcccCcccceeecccChHHHHHHHH
Confidence            444446788887  999999999999999999999999999999999 9999999954 34  99999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhc
Q psy10470        184 KGQSKDDAQAAYIAKVVELVAKYG  207 (209)
Q Consensus       184 kgMSkeEAmkeYIelVeeL~pkyg  207 (209)
                      +.||+++||..||.+++.+++.|-
T Consensus        99 G~~sre~AM~~FV~Lldr~C~~F~  122 (469)
T KOG3878|consen   99 GEISREQAMEGFVDLLDRMCSAFR  122 (469)
T ss_pred             hcccHHHHHHHHHHHHHhcchhhh
Confidence            999999999999999999988764

>smart00295 B41 Band 4

Probab=96.76  E-value=0.0047  Score=49.89  Aligned_cols=86  Identities=17%  Similarity=0.157  Sum_probs=59.0

Q ss_pred             hhHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCC-------------C-CCCCh-------h
Q psy10470        114 GLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSK-------------P-GMLDF-------K  172 (209)
Q Consensus       114 eLe~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~k-------------P-G~~D~-------~  172 (209)
                      .++--|..+...+.+..       -+.+.++...|-||.- |+..|+++.+.             | ++.+.       .
T Consensus        98 ~~~~ly~Q~~~di~~g~-------~~~~~~~~~~Laal~~-q~~~gd~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~  169 (207)
T smart00295       98 RLNLLYLQVRNDILEGR-------LPCPEEEALLLAALAL-QAEFGDYDEELHVLLKELSLKRFLPKQLLDSEKRTLKEW  169 (207)
T ss_pred             HHHHHHHHHHHHHHcCc-------cCCCHHHHHHHHHHHH-HHHhcCCChHhcCCccccccceeCChhhhhhccccHHHH
Confidence            34455555555443111       2445778889999999 99999987422             1 11111       1


Q ss_pred             HHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhcC
Q psy10470        173 GKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGK  208 (209)
Q Consensus       173 graKwnAWkqlkgMSkeEAmkeYIelVeeL~pkyg~  208 (209)
                      ...-.++|+++.|||+.+||.+||+++.++ |.||.
T Consensus       170 ~~~i~~~~~~~~~~s~~~a~~~yl~~~~~l-p~fG~  204 (207)
T smart00295      170 RERIVSLHKELIGLSPEEAKLKYLELAEKL-PTYGV  204 (207)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHhccc-cccCc
Confidence            222348999999999999999999999988 99986

1 homologues. Also known as ezrin/radixin/moesin (ERM) protein domains. Present in myosins, ezrin, radixin, moesin, protein tyrosine phosphatases. Plasma membrane-binding domain. These proteins play structural and regulatory roles in the assembly and stabilization of specialized plasmamembrane domains. Some PDZ domain containing proteins bind one or more of this family. Now includes JAKs.

>PF00373 FERM_M: FERM central domain; InterPro: IPR019748 The FERM domain (F for 4

Probab=95.93  E-value=0.033  Score=41.83  Aligned_cols=86  Identities=12%  Similarity=0.166  Sum_probs=56.5

Q ss_pred             hhHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCC---CCC-------------CC--h----
Q psy10470        114 GLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSK---PGM-------------LD--F----  171 (209)
Q Consensus       114 eLe~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~k---PG~-------------~D--~----  171 (209)
                      +++--|..+..-+.+..       -+.+.++-++|-||.- |+..|+++...   .+.             +.  .    
T Consensus        10 ~~~lly~Q~~~~vl~g~-------~~~~~e~a~~LAAl~~-q~~~gd~~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~   81 (126)
T PF00373_consen   10 TRHLLYLQARRDVLQGR-------LPCSEEDAIKLAALQL-QAEYGDYNSEQEHSSGYIDPEIKEFQLENFIPKAPKLIK   81 (126)
T ss_dssp             HHHHHHHHHHHHHHTTS-------STS-HHHHHHHHHHHH-HHHHTSSTTTTTSSTTTTTGSHHCTCGHGTSSHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcCc-------CCCCHHHHHHHHHHHH-HHHhcCCCcccccCcccccccccchhhhhhhhhhHHHHh
Confidence            45555666665544221       2556788899999999 99999998221   222             12  0    


Q ss_pred             -hHHHH-----HHHHhhCCCCCHHHHHHHHHHHHHHHHHhhcC
Q psy10470        172 -KGKAK-----WEAWESRKGQSKDDAQAAYIAKVVELVAKYGK  208 (209)
Q Consensus       172 -~graK-----wnAWkqlkgMSkeEAmkeYIelVeeL~pkyg~  208 (209)
                       .....     -..|+++.|||..+||..||+++.+ +|.||.
T Consensus        82 ~~~~~~~~~~I~~~~~~l~~~s~~~a~~~fl~~~~~-~p~yG~  123 (126)
T PF00373_consen   82 KMKQKEWEKRILEQHKKLRGMSPEEAKLQFLQICQS-LPTYGS  123 (126)
T ss_dssp             CSTHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHCT-STTTTE
T ss_pred             hhhHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhc-CCCCCc
Confidence             11112     2889999999999999999999997 488874

1 protein, E for ezrin, R for radixin and M for moesin) is a widespread protein module involved in localising proteins to the plasma membrane []. FERM domains are found in a number of cytoskeletal-associated proteins that associate with various proteins at the interface between the plasma membrane and the cytoskeleton. The FERM domain is located at the N terminus of the majority of FERM-containing proteins [, ], which includes: Band 4.1, which links the spectrin-actin cytoskeleton of erythrocytes to the plasma membrane. Ezrin, a component of the undercoat of the microvilli plasma membrane. Moesin, which is probably involved in binding major cytoskeletal structures to the plasma membrane. Radixin, which is involved in the binding of the barbed end of actin filaments to the plasma membrane in the undercoat of the cell- to-cell adherens junction. Talin, a cytoskeletal protein concentrated in regions of cell-substratum contact and, in lymphocytes, of cell-cell contacts. Filopodin, a slime mold protein that binds actin and which is involved in the control of cell motility and chemotaxis. Merlin (or schwannomin). Protein NBL4. Unconventional myosins X, VIIa and XV, which are mutated in congenital deafness. Focal-adhesion kinases (FAKs), cytoplasmic protein tyrosine kinases involved in signalling through integrins. Janus tyrosine kinases (JAKs), cytoplasmic tyrosine kinases that are non-covalently associated with the cytoplasmic tails of receptors for cytokines or polypeptidic hormones. Non-receptor tyrosine-protein kinase TYK2. Protein-tyrosine phosphatases PTPN3 and PTPN4, enzyme that appear to act at junctions between the membrane and the cytoskeleton. Protein-tyrosine phosphatases PTPN14 and PTP-D1, PTP-RL10 and PTP2E. Caenorhabditis elegans protein phosphatase ptp-1. Ezrin, moesin, and radixin are highly related proteins (ERM protein family), but the other proteins in which the FERM domain is found do not share any region of similarity outside of this domain. ERM proteins are made of three domains, the FERM domain, a central helical domain and a C-terminal tail domain, which binds F-actin. The amino-acid sequence of the FERM domain is highly conserved among ERM proteins and is responsible for membrane association by direct binding to the cytoplasmic domain or tail of integral membrane proteins. ERM proteins are regulated by an intramolecular association of the FERM and C-terminal tail domains that masks their binding sites for other molecules. For cytoskeleton-membrane cross-linking, the dormant molecules becomes activated and the FERM domain attaches to the membrane by binding specific membrane proteins, while the last 34 residues of the tail bind actin filaments. Aside from binding to membranes, the activated FERM domain of ERM proteins can also bind the guanine nucleotide dissociation inhibitor of Rho GTPase (RhoDGI), which suggests that in addition to functioning as a cross-linker, ERM proteins may influence Rho signalling pathways. The crystal structure of the FERM domain reveals that it is composed of three structural modules (F1, F2, and F3) that together form a compact clover-shaped structure []. The FERM domain has also been called the amino-terminal domain, the 30kDa domain, 4.1N30, the membrane-cytoskeletal-linking domain, the ERM-like domain, the ezrin-like domain of the band 4.1 superfamily, the conserved N-terminal region, and the membrane attachment domain [].; PDB: 4DXA_B 2EMS_A 2ZPY_A 1J19_A 2D10_B 2D11_B 1GC6_A 2D2Q_A 2EMT_A 2YVC_A ....

>KOG3530|consensus

Probab=88.07  E-value=1.2  Score=44.80  Aligned_cols=80  Identities=16%  Similarity=0.135  Sum_probs=54.9

Q ss_pred             HhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCC--CCC---CCh-------hHHHHHHHHhhCCCCCHHHHHH
Q psy10470        126 LGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSK--PGM---LDF-------KGKAKWEAWESRKGQSKDDAQA  193 (209)
Q Consensus       126 a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~k--PG~---~D~-------~graKwnAWkqlkgMSkeEAmk  193 (209)
                      ..|.+++.+.-.-.-+.+.--+|=||-= |+-.|||+.+.  |+.   |.+       -..+=.+-|++++|+++.+|+-
T Consensus       108 flQlKqDll~GRL~Cp~~~AaeLaAl~l-QsELGDYn~~~Ht~~yVSefRf~p~Qte~LE~~I~e~hK~~rGqspaqAEl  186 (616)
T KOG3530|consen  108 FLQLKQDLLSGRLYCPFETAAELAALIL-QSELGDYNEEEHTGGYVSEFRFLPNQTEELEERIFELHKELRGQSPAQAEL  186 (616)
T ss_pred             HHHHHHHHhcCCCCCchhhHHHHHHHHH-HHHhcCCChhhccccceeeeEecccccHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            3445555554333445666677888877 99999999553  443   222       2344469999999999999999


Q ss_pred             HHHHHHHHHHHhhc
Q psy10470        194 AYIAKVVELVAKYG  207 (209)
Q Consensus       194 eYIelVeeL~pkyg  207 (209)
                      +|++.+.-| +-||
T Consensus       187 nyLnkAkwL-emYG  199 (616)
T KOG3530|consen  187 NYLNKAKWL-EMYG  199 (616)
T ss_pred             HHHhhhhhh-hhcc
Confidence            999988643 4454

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	209
1hb6_A	86	Structure Of Bovine Acyl-Coa Binding Protein In Ort		1e-10
2fdq_A	86	Crystal Structure Of Acbp From Armadillo Harderian		2e-10
2cb8_A	87	High Resolution Crystal Structure Of Liganded Human		3e-10
3epy_A	89	Crystal Structure Of Human Acyl-Coa Binding Domain		3e-10
2fj9_A	86	High Resolution Crystal Structure Of The Unliganded		3e-10
1st7_A	86	Solution Structure Of Acyl Coenzyme A Binding Prote		4e-08
3fp5_A	106	Crystal Structure Of Acbp From Moniliophthora Perni		9e-07
2lbb_A	96	Solution Structure Of Acyl Coa Binding Protein From		8e-04

>pdb|1HB6|A Chain A, Structure Of Bovine Acyl-Coa Binding Protein In Orthorhombic Crystal Form Length = 86

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 33/44 (75%)
Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGMLDFKGKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 42  ERPGMLDFKGKAKWDAWNELKGTSKEDAMKAYIDKVEELKKKYG 85

>pdb|2FDQ|A Chain A, Crystal Structure Of Acbp From Armadillo Harderian Gland Length = 86

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           +PGMLDFKGKAKW+AW   KG SK+DA  +YI KV EL  KYG
Sbjct: 43  RPGMLDFKGKAKWDAWNQLKGTSKEDAMKSYIDKVEELKKKYG 85

>pdb|2CB8|A Chain A, High Resolution Crystal Structure Of Liganded Human L-Acbp Length = 87

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 32/44 (72%)
Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGMLDF GKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 43  ERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYG 86

>pdb|3EPY|A Chain A, Crystal Structure Of Human Acyl-Coa Binding Domain 7 Complexed With Palmitoyl-Coa Length = 89

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 166 PGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           PGMLD KGKAKWEAW  +KG S +DA +AYI+K  EL+ KYG
Sbjct: 47  PGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAKELIEKYG 88

>pdb|2FJ9|A Chain A, High Resolution Crystal Structure Of The Unliganded Human Acbp Length = 86

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 32/44 (72%)
Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            +PGMLDF GKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 42  ERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYG 85

>pdb|1ST7|A Chain A, Solution Structure Of Acyl Coenzyme A Binding Protein From Yeast Length = 86

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           + KPG+ + K + KWEAWE+ KG+S++DA+  YIA V +L+AKY 
Sbjct: 41  KEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIALVDQLIAKYS 85

>pdb|3FP5|A Chain A, Crystal Structure Of Acbp From Moniliophthora Perniciosa Length = 106

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAK 205
           S+PG++DF GKAKW+AW+S +G SK+ A   Y+ K++E++ K
Sbjct: 49  SRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVEKLLEILKK 90

>pdb|2LBB|A Chain A, Solution Structure Of Acyl Coa Binding Protein From Babesia Bovis T2bo Length = 96

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 162 GRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVA 204
            + KPGML  + K KWEAW + +G S + A+ AY+ K+++ +A
Sbjct: 50  NKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYV-KLLDTLA 91

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	209
3flv_A	119	Acyl-COA-binding domain-containing protein 5; lipi	5e-14
3epy_A	89	Acyl-COA-binding domain-containing protein 7; acyl	8e-14
2lbb_A	96	Acyl COA binding protein; protein binding, structu	2e-13
3fp5_A	106	Acyl-COA binding protein; ACBP, cacao disease, fat	2e-13
1st7_A	86	ACBP, acyl-COA-binding protein; four helix bundle,	3e-13
1hbk_A	89	ACBP, acyl-COA binding protein; fatty acid metabol	4e-13
2cb8_A	87	Acyl-COA-binding protein; acyl-coenzyme A binding	4e-13
2cqu_A	116	Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi	1e-12
2wh5_A	106	Acyl-COA-binding domain-containing protein 4; alte	2e-12
2cop_A	109	Acyl-coenzyme A binding domain containing 6; acyl	3e-12

>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens} Length = 119

 Score = 65.1 bits (158), Expect = 5e-14
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK 209
            S+PG  D  G+ KW+AW S    +K++A  AY+ ++ +++      
Sbjct: 68  LSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKIIETMPMT 114

>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} Length = 89

 Score = 63.3 bits (154), Expect = 8e-14
 Identities = 28/45 (62%), Positives = 34/45 (75%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
            + PGMLD KGKAKWEAW  +KG S +DA +AYI+K  EL+ KYG
Sbjct: 44  IACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAKELIEKYG 88

>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis} Length = 96

 Score = 63.0 bits (153), Expect = 2e-13
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKY 206
           + KPGML  + K KWEAW + +G S + A+ AY+  +  L   +
Sbjct: 51  KPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLLDTLAPSW 94

>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} Length = 106

 Score = 63.0 bits (153), Expect = 2e-13
 Identities = 21/47 (44%), Positives = 34/47 (72%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK 209
            S+PG++DF GKAKW+AW+S +G SK+ A   Y+ K++E++ K   +
Sbjct: 48  ISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVEKLLEILKKADTE 94

>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae} Length = 86

 Score = 61.8 bits (150), Expect = 3e-13
 Identities = 23/45 (51%), Positives = 34/45 (75%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           + KPG+ + K + KWEAWE+ KG+S++DA+  YIA V +L+AKY 
Sbjct: 41  KEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIALVDQLIAKYS 85

>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1 Length = 89

 Score = 61.8 bits (150), Expect = 4e-13
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKY 206
             +P    +  + K+EAW+S +  +++DAQ  Y+  V E+   +
Sbjct: 44  IKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDIVSEIFPYW 87

>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A Length = 87

 Score = 61.8 bits (150), Expect = 4e-13
 Identities = 29/45 (64%), Positives = 32/45 (71%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
             +PGMLDF GKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 42  TERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYG 86

>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 61.2 bits (148), Expect = 1e-12
 Identities = 15/47 (31%), Positives = 21/47 (44%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYGKK 209
             KPG+ D   KAKW+AW +     K+ A+  Y+  V  L       
Sbjct: 56  MPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESS 102

>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens} Length = 106

 Score = 60.5 bits (146), Expect = 2e-12
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 163 RSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKY 206
             +PG  D  G+ KW+AW S    S+++A +AYI ++  +  K 
Sbjct: 52  VPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKV 95

>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 60.1 bits (145), Expect = 3e-12
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 145 MLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVA 204
           +L    + K           KP   DF+GK KWEAW++    S   A   YIA V +L  
Sbjct: 31  LLYLYARYKQ-VKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDP 89

Query: 205 KY 206
            +
Sbjct: 90  GW 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	209
1st7_A	86	ACBP, acyl-COA-binding protein; four helix bundle,	99.97
1hbk_A	89	ACBP, acyl-COA binding protein; fatty acid metabol	99.97
3epy_A	89	Acyl-COA-binding domain-containing protein 7; acyl	99.97
2cb8_A	87	Acyl-COA-binding protein; acyl-coenzyme A binding	99.96
2cop_A	109	Acyl-coenzyme A binding domain containing 6; acyl	99.96
3fp5_A	106	Acyl-COA binding protein; ACBP, cacao disease, fat	99.96
2lbb_A	96	Acyl COA binding protein; protein binding, structu	99.96
2wh5_A	106	Acyl-COA-binding domain-containing protein 4; alte	99.96
3flv_A	119	Acyl-COA-binding domain-containing protein 5; lipi	99.96
2cqu_A	116	Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi	99.95
1mix_A	206	Talin; focal adhesion, integrin binding, FERM doma	98.23
4f7g_A	222	Talin-1; alpha-helix bundle, integrin activation,	95.77
1ef1_A	294	Moesin; membrane, FERM domain, tail domain, membra	95.54
1h4r_A	314	Merlin; FERM, neurofibromatosis, NF2, structural p	95.43
3qij_A	296	Protein 4.1; cytoskeleton, structural genomics, st	95.29
3ivf_A	371	Talin-1; FERM domain, cell membrane, cell projecti	94.19
2i1j_A	575	Moesin; FERM, coiled-coil, C-ermad, ERM, radixin,	93.65
3au4_A	555	Myosin-X; protein-protein complex, motor protein c	90.68
4dxa_B	322	KREV interaction trapped protein 1; GTPase, FERM,	86.4

>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.3e-31  Score=199.26  Aligned_cols=86  Identities=33%  Similarity=0.587  Sum_probs=79.9

Q ss_pred             hHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHH
Q psy10470        115 LDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAA  194 (209)
Q Consensus       115 Le~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmke  194 (209)
                      |+..|++|+..+.+..       ..++++++|+|||||| |||+|||++++||+||++|++||+||++++|||++|||++
T Consensus         1 l~~~F~~A~~~v~~l~-------~~~~~~~~L~lYalyK-QAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~   72 (86)
T 1st7_A            1 VSQLFEEKAKAVNELP-------TKPSTDELLELYALYK-QATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKE   72 (86)
T ss_dssp             CHHHHHHHHHHHTSCS-------SCCCHHHHHHHHHHHH-HHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcc-------CCcCHHHHHHHHHHHH-HHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHH
Confidence            4678999999988433       3678999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcC
Q psy10470        195 YIAKVVELVAKYGK  208 (209)
Q Consensus       195 YIelVeeL~pkyg~  208 (209)
                      ||++|++++|+|++
T Consensus        73 YI~~v~~l~~~~~~   86 (86)
T 1st7_A           73 YIALVDQLIAKYSS   86 (86)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHhhhhcC
Confidence            99999999999985

>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1

Probab=99.97  E-value=2.9e-31  Score=199.76  Aligned_cols=87  Identities=20%  Similarity=0.296  Sum_probs=80.5

Q ss_pred             hHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHH
Q psy10470        115 LDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAA  194 (209)
Q Consensus       115 Le~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmke  194 (209)
                      |+..|++|+..+.+..     +...++++++|+|||||| |||+|||++++||+||++|++||+||++++|||++|||++
T Consensus         2 l~~~F~~A~~~v~~l~-----~~~~~~~~~~L~LYalyK-QAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~   75 (89)
T 1hbk_A            2 MAQVFEECVSFINGLP-----RTINLPNELKLDLYKYYK-QSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKR   75 (89)
T ss_dssp             HHHHHHHHHHHHHHSC-----TTCCCCHHHHHHHHHHHH-HHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcC-----CcCCCCHHHHHHHHHHHH-HhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHH
Confidence            6788999999998433     235779999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhc
Q psy10470        195 YIAKVVELVAKYG  207 (209)
Q Consensus       195 YIelVeeL~pkyg  207 (209)
                      ||++|++++|+|+
T Consensus        76 YI~~v~~l~~~~~   88 (89)
T 1hbk_A           76 YVDIVSEIFPYWQ   88 (89)
T ss_dssp             HHHHHHHHCTTTT
T ss_pred             HHHHHHHHccccc
Confidence            9999999999997

>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1

Probab=99.97  E-value=4.1e-31  Score=199.71  Aligned_cols=87  Identities=38%  Similarity=0.598  Sum_probs=81.2

Q ss_pred             hhHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHH
Q psy10470        114 GLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQA  193 (209)
Q Consensus       114 eLe~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmk  193 (209)
                      .|+..|++|+..+.+..       ..++++++|+|||||| |||+|||++++||+||++|++||+||++++|||++|||+
T Consensus         3 ~L~~~F~~A~~~vk~l~-------~~p~~~~~L~lYalyK-QAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~   74 (89)
T 3epy_A            3 ALQADFDRAAEDVRKLK-------ARPDDGELKELYGLYK-QAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATS   74 (89)
T ss_dssp             HHHHHHHHHHHHGGGCS-------SCCCHHHHHHHHHHHH-HHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHcC-------CCcCHHHHHHHHHHHH-HHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHH
Confidence            47899999999998443       3678999999999999 999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcC
Q psy10470        194 AYIAKVVELVAKYGK  208 (209)
Q Consensus       194 eYIelVeeL~pkyg~  208 (209)
                      +||++|++++++||.
T Consensus        75 ~Yi~~v~~l~~ky~~   89 (89)
T 3epy_A           75 AYISKAKELIEKYGI   89 (89)
T ss_dssp             HHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhhhhcC
Confidence            999999999999984

>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A

Probab=99.96  E-value=3.2e-30  Score=193.77  Aligned_cols=85  Identities=41%  Similarity=0.629  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHHH
Q psy10470        116 DRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAY  195 (209)
Q Consensus       116 e~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmkeY  195 (209)
                      +..|++|+..+.+..       ..++++++|+|||||| |||+|||++++||+||++|++||+||++++|||++|||++|
T Consensus         3 ~~~F~~A~~~vk~l~-------~~~~~~~~L~lYalyK-QAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Y   74 (87)
T 2cb8_A            3 QAEFEKAAEEVRHLK-------TKPSDEEMLFIYGHYK-QATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAY   74 (87)
T ss_dssp             HHHHHHHHHHGGGCS-------SCCCHHHHHHHHHHHH-HHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcc-------CCcCHHHHHHHHHHHH-hhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence            578999999988433       3678999999999999 99999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcC
Q psy10470        196 IAKVVELVAKYGK  208 (209)
Q Consensus       196 IelVeeL~pkyg~  208 (209)
                      |++|++++++||.
T Consensus        75 i~~v~~l~~~~~~   87 (87)
T 2cb8_A           75 INKVEELKKKYGI   87 (87)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999983

>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.96  E-value=3.9e-30  Score=200.74  Aligned_cols=88  Identities=28%  Similarity=0.472  Sum_probs=81.8

Q ss_pred             hhhHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHH
Q psy10470        113 SGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQ  192 (209)
Q Consensus       113 ~eLe~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAm  192 (209)
                      ++|+..|++|+..+....       ..++++++|+|||||| |||+|||++++||+||++|++||+||++++|||++|||
T Consensus         6 ~~l~~~F~~A~~~vk~l~-------~~p~~~~~L~LYaLyK-QAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm   77 (109)
T 2cop_A            6 SGLAELFEKAAAHLQGLI-------QVASREQLLYLYARYK-QVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAM   77 (109)
T ss_dssp             CCSHHHHHHHHHHHTTST-------TTSCHHHHHHHHHHHH-HHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcc-------cCCCHHHHHHHHHHHH-HhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHH
Confidence            478899999999988433       2578999999999999 99999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcC
Q psy10470        193 AAYIAKVVELVAKYGK  208 (209)
Q Consensus       193 keYIelVeeL~pkyg~  208 (209)
                      ++||++|++++|.|+.
T Consensus        78 ~~YI~lv~~l~~~~~~   93 (109)
T 2cop_A           78 QEYIAVVKKLDPGWNP   93 (109)
T ss_dssp             HHHHHHHHHHCTTCCC
T ss_pred             HHHHHHHHHHhhhhcc
Confidence            9999999999999975

>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0

Probab=99.96  E-value=1e-29  Score=197.95  Aligned_cols=89  Identities=30%  Similarity=0.420  Sum_probs=81.5

Q ss_pred             hhHHHHHHHHHHHhhhhhccccccC--CCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHH
Q psy10470        114 GLDRVFRALSKKLGQHRLSCAFKSK--IFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDA  191 (209)
Q Consensus       114 eLe~~FeeAvk~a~~~~~~~~~K~g--~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEA  191 (209)
                      .++..|++|+..+.+     +++.|  .++++++|+|||||| |||+|||++++||+||++|++||+||++++|||++||
T Consensus         3 ~~~~~F~~A~~~vk~-----l~~~g~~~ps~~~~L~LYalyK-QAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA   76 (106)
T 3fp5_A            3 MSKAKFDKAVEIVQS-----LPKDGPIKPTQDEQLYFYKYFK-QATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVA   76 (106)
T ss_dssp             CCHHHHHHHHHHHHH-----CCSSSSSCCCHHHHHHHHHHHH-HHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHH
T ss_pred             chHHHHHHHHHHHHh-----cccccCCCCCHHHHHHHHHHHH-HHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHH
Confidence            457889999999983     33333  678999999999999 9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcC
Q psy10470        192 QAAYIAKVVELVAKYGK  208 (209)
Q Consensus       192 mkeYIelVeeL~pkyg~  208 (209)
                      |++||++|+++++++|+
T Consensus        77 ~~~YI~~v~~l~~~~~~   93 (106)
T 3fp5_A           77 YQKYVEKLLEILKKADT   93 (106)
T ss_dssp             HHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHhcccCc
Confidence            99999999999999886

>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}

Probab=99.96  E-value=9.3e-30  Score=195.32  Aligned_cols=84  Identities=29%  Similarity=0.441  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHHHH
Q psy10470        117 RVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYI  196 (209)
Q Consensus       117 ~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmkeYI  196 (209)
                      ..|++|+..+++..     + ..++++++|+|||||| |||+|||++++||+||++|++||+||++++|||++|||++||
T Consensus        12 ~~F~~A~~~vk~l~-----~-~~ps~~~~L~LYaLyK-QAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI   84 (96)
T 2lbb_A           12 DDFDAAVKYVSNTT-----T-MMASNDDKLCFYKYYK-QATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYV   84 (96)
T ss_dssp             STHHHHHHHHHHCC-----C-SCCCTTTTTHHHHHHH-HTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-----C-CCCCHHHHHHHHHHHH-HHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHH
Confidence            35999999998433     2 4678999999999999 999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhc
Q psy10470        197 AKVVELVAKYG  207 (209)
Q Consensus       197 elVeeL~pkyg  207 (209)
                      ++|++++++|+
T Consensus        85 ~lv~~l~~~~~   95 (96)
T 2lbb_A           85 KLLDTLAPSWR   95 (96)
T ss_dssp             HHHHHHCGGGT
T ss_pred             HHHHHHhchhc
Confidence            99999999997

>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=197.58  Aligned_cols=91  Identities=25%  Similarity=0.308  Sum_probs=78.8

Q ss_pred             CchhhHHHHHHHHHHHhhhhhccccccC--CCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCH
Q psy10470        111 NNSGLDRVFRALSKKLGQHRLSCAFKSK--IFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSK  188 (209)
Q Consensus       111 ~~~eLe~~FeeAvk~a~~~~~~~~~K~g--~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSk  188 (209)
                      ++.+|+..|++|+..+.+.     ++.|  .++++++|+|||||| |||+|||+.++||+||++|++||+||++++|||+
T Consensus         4 ~~~~l~~~F~~A~~~vk~l-----~~~g~~~ps~e~~L~LYaLyK-QAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~   77 (106)
T 2wh5_A            4 PEPDCQKQFQAAVSVIQNL-----PKNGSYRPSYEEMLRFYSYYK-QATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSR   77 (106)
T ss_dssp             -----CHHHHHHHHHHHHS-----CSSCSCCCCHHHHHHHHHHHH-HHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCH
T ss_pred             cchHHHHHHHHHHHHHHhc-----cccCCCCCCHHHHHHHHHHHh-hhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCH
Confidence            4557889999999999833     3333  568999999999999 9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhc
Q psy10470        189 DDAQAAYIAKVVELVAKYG  207 (209)
Q Consensus       189 eEAmkeYIelVeeL~pkyg  207 (209)
                      +|||++||++|+++++++.
T Consensus        78 eeA~~~YI~~v~~l~~k~~   96 (106)
T 2wh5_A           78 EEAMSAYITEMKLVAQKVI   96 (106)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999874

>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}

Probab=99.96  E-value=3.4e-29  Score=198.92  Aligned_cols=92  Identities=27%  Similarity=0.330  Sum_probs=82.3

Q ss_pred             hhhHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHH
Q psy10470        113 SGLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQ  192 (209)
Q Consensus       113 ~eLe~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAm  192 (209)
                      ++|+..|++|++.+.+.....   ...++++++|+|||||| |||+|||+.++||+||++|++||+||++++|||++|||
T Consensus        22 ~dLe~~F~~A~~~Vk~l~~~g---~~~ps~d~~L~LYaLyK-QAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm   97 (119)
T 3flv_A           22 SMHETRFEAAVKVIQSLPKNG---SFQPTNEMMLKFYSFYK-QATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAM   97 (119)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHS---SCCCCHHHHHHHHHHHH-HHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCcccC---CCCCCHHHHHHHHHHHH-HHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHH
Confidence            489999999999998444311   12468999999999999 99999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcC
Q psy10470        193 AAYIAKVVELVAKYGK  208 (209)
Q Consensus       193 keYIelVeeL~pkyg~  208 (209)
                      ++||++|+++++++..
T Consensus        98 ~~YI~~v~~l~~~~~~  113 (119)
T 3flv_A           98 IAYVEEMKKIIETMPM  113 (119)
T ss_dssp             HHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhhCCC
Confidence            9999999999999864

>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.95  E-value=5.7e-29  Score=196.53  Aligned_cols=87  Identities=24%  Similarity=0.347  Sum_probs=80.6

Q ss_pred             hhHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHH
Q psy10470        114 GLDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQA  193 (209)
Q Consensus       114 eLe~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmk  193 (209)
                      +++..|++|+..++....       .++++++|+|||||| |||+|||+.++||+||+++++||+||++++|||++|||+
T Consensus        15 ~~~~~F~~A~~~vk~l~~-------~p~~~~~L~LYaLyK-QAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~   86 (116)
T 2cqu_A           15 ASQKDFENSMNQVKLLKK-------DPGNEVKLKLYALYK-QATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQ   86 (116)
T ss_dssp             CCHHHHHHHHHHHHHCCS-------CCCHHHHHHHHHHHT-TTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHccC-------CCCHHHHHHHHHHHH-HHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHH
Confidence            478999999999984432       468999999999999 999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcC
Q psy10470        194 AYIAKVVELVAKYGK  208 (209)
Q Consensus       194 eYIelVeeL~pkyg~  208 (209)
                      +||++|++++|.|+.
T Consensus        87 ~YI~lv~~l~~~~~~  101 (116)
T 2cqu_A           87 NYVDLVSSLSPSLES  101 (116)
T ss_dssp             HHHHHHHHHCSCCCC
T ss_pred             HHHHHHHHHcccccc
Confidence            999999999999874

>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B

Probab=98.23  E-value=1.8e-06  Score=69.54  Aligned_cols=68  Identities=21%  Similarity=0.283  Sum_probs=57.5

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCChh------------HHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDFK------------GKAKWEAWESRKGQSKDDAQAAYIAKVVELVA  204 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~~------------graKwnAWkqlkgMSkeEAmkeYIelVeeL~p  204 (209)
                      +.+.++.+.|.||.. ||..||++..  .|+++++.            .+..+++|++++|||++||+.+|++++.++ |
T Consensus        35 ~~~~~~a~~Laal~~-qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~~g~s~~~A~~~yL~~~~~l-~  112 (206)
T 1mix_A           35 PVSFDKACEFAGYQC-QIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMSEIEAKVRYVKLARSL-K  112 (206)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHS-T
T ss_pred             ccCHHHHHHHHHHhh-hheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHccCCCHHHHHHHHHHHHHhC-c
Confidence            456788999999999 9999999854  47766654            677789999999999999999999999765 7


Q ss_pred             hhcC
Q psy10470        205 KYGK  208 (209)
Q Consensus       205 kyg~  208 (209)
                      .||.
T Consensus       113 ~yG~  116 (206)
T 1mix_A          113 TYGV  116 (206)
T ss_dssp             TTTC
T ss_pred             ccCc
Confidence            7774

>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}

Probab=95.77  E-value=0.014  Score=48.00  Aligned_cols=68  Identities=22%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh-----------hHHH-HHHHHhhCCCCCHHHHHHHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF-----------KGKA-KWEAWESRKGQSKDDAQAAYIAKVVELVA  204 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~-----------~gra-KwnAWkqlkgMSkeEAmkeYIelVeeL~p  204 (209)
                      +.+.++-+.|=||-= ||..||++..  .|++.++           .... =.+.|+++.|||++||+.+|++.+.++ |
T Consensus        46 ~~~~e~a~~LAal~~-Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~~~~l-~  123 (222)
T 4f7g_A           46 PVSFDKACEFAGFQC-QIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSL-K  123 (222)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHTTTTCCHHHHHHHHHHHHHTS-T
T ss_pred             cCCHHHHHHHHHHHH-HHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHhccCCCHHHHHHHHHHHHhhc-c
Confidence            345677788888888 9999998753  2443321           1112 247899999999999999999999865 7


Q ss_pred             hhcC
Q psy10470        205 KYGK  208 (209)
Q Consensus       205 kyg~  208 (209)
                      .||.
T Consensus       124 ~yG~  127 (222)
T 4f7g_A          124 TYGV  127 (222)
T ss_dssp             TTTC
T ss_pred             ccCc
Confidence            7774

>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A

Probab=95.54  E-value=0.014  Score=49.30  Aligned_cols=68  Identities=19%  Similarity=0.246  Sum_probs=50.3

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh---h-----H-----HHHH-----HHHhhCCCCCHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF---K-----G-----KAKW-----EAWESRKGQSKDDAQAAYIAK  198 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~---~-----g-----raKw-----nAWkqlkgMSkeEAmkeYIel  198 (209)
                      +.+.++.+.|=||-- ||..||++..  .|++++.   .     .     ...|     +.|+++.|||+++|+.+|++.
T Consensus       113 ~~~~e~a~~Laal~~-q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~~A~~~yL~~  191 (294)
T 1ef1_A          113 YCPPETAVLLASYAV-QSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKI  191 (294)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH-HHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence            345677888888888 9999999844  3454311   1     1     1223     789999999999999999999


Q ss_pred             HHHHHHhhcC
Q psy10470        199 VVELVAKYGK  208 (209)
Q Consensus       199 VeeL~pkyg~  208 (209)
                      +.+ .|.||.
T Consensus       192 ~~~-lp~yG~  200 (294)
T 1ef1_A          192 AQD-LEMYGV  200 (294)
T ss_dssp             HTT-STTTTC
T ss_pred             Hcc-cCccCc
Confidence            986 678875

>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A

Probab=95.43  E-value=0.016  Score=49.65  Aligned_cols=68  Identities=18%  Similarity=0.208  Sum_probs=50.8

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh------------------hHHHHHHHHhhCCCCCHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF------------------KGKAKWEAWESRKGQSKDDAQAAYIAK  198 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~------------------~graKwnAWkqlkgMSkeEAmkeYIel  198 (209)
                      +.+.++.+.|=||-- ||..||++..  .|++++.                  ..+.=.+.|+++.|||++||+.+|+++
T Consensus       133 ~~~~e~a~~Laal~~-Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~  211 (314)
T 1h4r_A          133 YCPPEASVLLASYAV-QAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKI  211 (314)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH-HHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            445778889999988 9999999744  3554221                  111123789999999999999999999


Q ss_pred             HHHHHHhhcC
Q psy10470        199 VVELVAKYGK  208 (209)
Q Consensus       199 VeeL~pkyg~  208 (209)
                      +.+ +|.||.
T Consensus       212 ~~~-lp~yG~  220 (314)
T 1h4r_A          212 AQD-LEMYGV  220 (314)
T ss_dssp             HTT-STTTTC
T ss_pred             Hhc-cCccCc
Confidence            976 577774

>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A

Probab=95.29  E-value=0.01  Score=51.22  Aligned_cols=68  Identities=7%  Similarity=0.019  Sum_probs=50.5

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCC----------hhHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLD----------FKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKY  206 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D----------~~graKwnAWkqlkgMSkeEAmkeYIelVeeL~pky  206 (209)
                      +.+.++.+.|=||.= ||..||++..  .|+.+.          -..+.=.+.|+++.|||++||+.+||+.+.+ +|.|
T Consensus       127 ~c~~e~a~~LAAl~~-Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~-l~~y  204 (296)
T 3qij_A          127 PCSFATLALLGSYTI-QSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKK-LSMY  204 (296)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTT-STTT
T ss_pred             CCCHHHHHHHHHHHH-HHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhc-cccc
Confidence            345677888888888 9999998732  233321          1222234789999999999999999999988 6888


Q ss_pred             cC
Q psy10470        207 GK  208 (209)
Q Consensus       207 g~  208 (209)
                      |.
T Consensus       205 G~  206 (296)
T 3qij_A          205 GV  206 (296)
T ss_dssp             TC
T ss_pred             Cc
Confidence            74

>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A

Probab=94.19  E-value=0.087  Score=46.32  Aligned_cols=68  Identities=21%  Similarity=0.287  Sum_probs=49.5

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh-----------hH-HHHHHHHhhCCCCCHHHHHHHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF-----------KG-KAKWEAWESRKGQSKDDAQAAYIAKVVELVA  204 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~-----------~g-raKwnAWkqlkgMSkeEAmkeYIelVeeL~p  204 (209)
                      +.+.++.+.|=||.= ||..||++..  .++.+++           .+ +.=-+.|+++.|||+++|+.+|++.+.+ .|
T Consensus       200 ~c~~e~a~~LAAl~~-qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~g~s~~eA~~~yL~~~~~-l~  277 (371)
T 3ivf_A          200 PVSFDKACEFAGFQC-QIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARS-LK  277 (371)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH-ST
T ss_pred             ecCHHHHHHHHHHHH-HHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHccCCCHHHHHHHHHHHHhc-cc
Confidence            345677788888888 9999999843  2343221           11 2224789999999999999999999976 47


Q ss_pred             hhcC
Q psy10470        205 KYGK  208 (209)
Q Consensus       205 kyg~  208 (209)
                      .||.
T Consensus       278 ~yG~  281 (371)
T 3ivf_A          278 TYGV  281 (371)
T ss_dssp             TTTC
T ss_pred             ccCc
Confidence            7774

>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A

Probab=93.65  E-value=0.077  Score=50.53  Aligned_cols=68  Identities=19%  Similarity=0.422  Sum_probs=50.8

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCC---hh-----H-----HHHH-----HHHhhCCCCCHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLD---FK-----G-----KAKW-----EAWESRKGQSKDDAQAAYIAK  198 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D---~~-----g-----raKw-----nAWkqlkgMSkeEAmkeYIel  198 (209)
                      +.+.+..+.|=||-- |+..||++..  .|++++   ++     .     ...|     ..|+++.|||+.+|+..|+++
T Consensus       116 ~c~~e~a~~LAAL~l-Qae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL~~  194 (575)
T 2i1j_A          116 YCPPETSVLLASYAV-QARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYLKI  194 (575)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH-HHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence            345677888888888 9999999843  355531   11     0     1223     689999999999999999999


Q ss_pred             HHHHHHhhcC
Q psy10470        199 VVELVAKYGK  208 (209)
Q Consensus       199 VeeL~pkyg~  208 (209)
                      +.. +|.||.
T Consensus       195 a~~-lp~YG~  203 (575)
T 2i1j_A          195 AQD-LEMYGV  203 (575)
T ss_dssp             HTT-STTTTC
T ss_pred             HHh-ccccCC
Confidence            986 588885

>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A

Probab=90.68  E-value=0.27  Score=45.58  Aligned_cols=30  Identities=30%  Similarity=0.655  Sum_probs=27.3

Q ss_pred             HHHhhCCCCCHHHHHHHHHHHHHHHHHhhcC
Q psy10470        178 EAWESRKGQSKDDAQAAYIAKVVELVAKYGK  208 (209)
Q Consensus       178 nAWkqlkgMSkeEAmkeYIelVeeL~pkyg~  208 (209)
                      +.|+++.|||++||+.+|++++.++ |.||.
T Consensus       423 ~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~  452 (555)
T 3au4_A          423 DKWRKFQGMNQEQAMAKYMALIKEW-PGYGS  452 (555)
T ss_dssp             HHHHTTTTCCHHHHHHHHHHHHTTS-TTTTC
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHhC-CCcCc
Confidence            6788999999999999999999877 88885

>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A

Probab=86.40  E-value=0.27  Score=42.49  Aligned_cols=68  Identities=15%  Similarity=0.241  Sum_probs=46.4

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCC--CCCCCCC---h---------------hHHHHHHHHhhC---CCCCHH--HHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGR--SKPGMLD---F---------------KGKAKWEAWESR---KGQSKD--DAQA  193 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~--~kPG~~D---~---------------~graKwnAWkql---kgMSke--EAmk  193 (209)
                      +.+.++...|=||-= ||..||++.  ..|++++   +               ....=.++|+++   .|||++  +|+.
T Consensus       131 ~c~~e~a~~LAAl~~-q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~~~~~~~g~s~~~a~a~~  209 (322)
T 4dxa_B          131 TAPDAKLITLASLLL-QIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHLQR  209 (322)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHHHHHC--CCCCCHHHHHH
T ss_pred             cCCHHHHHHHHHHHH-HHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHHhcccccCCChhHHHHHH
Confidence            345677788888888 999999863  2345432   1               012225789999   999975  5699


Q ss_pred             HHHHHHHHHHHhhcC
Q psy10470        194 AYIAKVVELVAKYGK  208 (209)
Q Consensus       194 eYIelVeeL~pkyg~  208 (209)
                      +|++.+.++ |.||.
T Consensus       210 ~yL~~~~~l-p~yG~  223 (322)
T 4dxa_B          210 MFLQNCWEI-PTYGA  223 (322)
T ss_dssp             HHHHHHHTS-TTTTC
T ss_pred             HHHHHHhcC-CCcCe
Confidence            999998754 77764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	209
d1hb6a_	86	a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos t	6e-14
d1hbka_	89	a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium	9e-14

>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]} Length = 86

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.5 bits (152), Expect = 6e-14
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query: 165 KPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKYG 207
           +PGMLDFKGKAKW+AW   KG SK+DA  AYI KV EL  KYG
Sbjct: 43  RPGMLDFKGKAKWDAWNELKGTSKEDAMKAYIDKVEELKKKYG 85

>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]} Length = 89

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Plasmodium falciparum [TaxId: 5833]

 Score = 62.1 bits (151), Expect = 9e-14
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 164 SKPGMLDFKGKAKWEAWESRKGQSKDDAQAAYIAKVVELVAKY 206
            +P    +  + K+EAW+S +  +++DAQ  Y+  V E+   +
Sbjct: 45  KEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDIVSEIFPYW 87

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	209
d1hbka_	89	Acyl-CoA binding protein {Plasmodium falciparum [T	99.96
d1hb6a_	86	Acyl-CoA binding protein {Cow (Bos taurus) [TaxId:	99.96
d1mixa1	114	Talin {Chicken (Gallus gallus) [TaxId: 9031]}	97.12
d1h4ra1	111	Merlin {Human (Homo sapiens) [TaxId: 9606]}	97.09
d1gg3a1	106	Erythroid membrane protein 4.1R {Human (Homo sapie	97.04
d1ef1a1	111	Moesin {Human (Homo sapiens) [TaxId: 9606]}	96.94
d2al6a1	123	Focal adhesion kinase 1 {Chicken (Gallus gallus) [	93.29

>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Plasmodium falciparum [TaxId: 5833]

Probab=99.96  E-value=4.1e-30  Score=192.59  Aligned_cols=87  Identities=20%  Similarity=0.284  Sum_probs=81.1

Q ss_pred             hHHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHH
Q psy10470        115 LDRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAA  194 (209)
Q Consensus       115 Le~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmke  194 (209)
                      |+..|++|+..++     +.++..+++++++|+|||||| |||+|||+.++||+||+++++||+||++++|||+++||+.
T Consensus         2 L~~~F~~A~~~v~-----~~~~~~~~~~~~~L~lY~lyK-Qat~G~~~~~~P~~~~~~~~~Kw~AW~~l~gms~~eA~~~   75 (89)
T d1hbka_           2 MAQVFEECVSFIN-----GLPRTINLPNELKLDLYKYYK-QSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKR   75 (89)
T ss_dssp             HHHHHHHHHHHHH-----HSCTTCCCCHHHHHHHHHHHH-HHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred             hHHHHHHHHHHHH-----hCCCCCCCCHHHHHHHHHHHH-HHhcCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHH
Confidence            6788999999997     444556789999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhc
Q psy10470        195 YIAKVVELVAKYG  207 (209)
Q Consensus       195 YIelVeeL~pkyg  207 (209)
                      ||++|++++|+|.
T Consensus        76 Yi~~v~~l~p~w~   88 (89)
T d1hbka_          76 YVDIVSEIFPYWQ   88 (89)
T ss_dssp             HHHHHHHHCTTTT
T ss_pred             HHHHHHHHccccc
Confidence            9999999999984

>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=8.2e-30  Score=189.57  Aligned_cols=85  Identities=41%  Similarity=0.614  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHhhhhhccccccCCCCcchhhhHHHhhhcccccCCCCCCCCCCCChhHHHHHHHHhhCCCCCHHHHHHHH
Q psy10470        116 DRVFRALSKKLGQHRLSCAFKSKIFGKPGMLDFKGKAKWEAWESRKGRSKPGMLDFKGKAKWEAWESRKGQSKDDAQAAY  195 (209)
Q Consensus       116 e~~FeeAvk~a~~~~~~~~~K~g~~s~d~kL~LYALYK~QAT~Gdcn~~kPG~~D~~graKwnAWkqlkgMSkeEAmkeY  195 (209)
                      +..|++|+..+....       ..++++++|+|||||| |||+|||+.++||+||+++++||+||++++|||++|||+.|
T Consensus         2 ~~~F~~A~~~v~~~~-------~~~~~~~~L~LYalyK-Qat~Gd~~~~~P~~~~~~~~aKw~AW~~~~gms~~eA~~~Y   73 (86)
T d1hb6a_           2 QAEFDKAAEEVKHLK-------TKPADEEMLFIYSHYK-QATVGDINTERPGMLDFKGKAKWDAWNELKGTSKEDAMKAY   73 (86)
T ss_dssp             HHHHHHHHHHGGGCS-------SCCCHHHHHHHHHHHH-HHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-------CCcCHHHHHHHHHHHH-HHhcCCCCCCCCCcchHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence            457999999997443       2568999999999999 99999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcC
Q psy10470        196 IAKVVELVAKYGK  208 (209)
Q Consensus       196 IelVeeL~pkyg~  208 (209)
                      |++|++++++||.
T Consensus        74 I~~v~~l~~k~g~   86 (86)
T d1hb6a_          74 IDKVEELKKKYGI   86 (86)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCc
Confidence            9999999999984

>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Talin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.12  E-value=0.00043  Score=49.96  Aligned_cols=63  Identities=17%  Similarity=0.217  Sum_probs=48.4

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh------------hHHHHHHHHhhCCCCCHHHHHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF------------KGKAKWEAWESRKGQSKDDAQAAYIAKVVEL  202 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~------------~graKwnAWkqlkgMSkeEAmkeYIelVeeL  202 (209)
                      +.+.++-..|-||.- |+..||++..  .|+.+..            ....=-+.|++++|||+.+|+..|++++.++
T Consensus        35 ~~~~~~a~~Laal~~-Q~e~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~h~~l~g~s~~~A~~~yL~~~~~l  111 (114)
T d1mixa1          35 PVSFDKACEFAGYQC-QIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMSEIEAKVRYVKLARSL  111 (114)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHH-HHHhCCCCccccccchhhhcccCChhhchHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhcC
Confidence            445788899999999 9999998843  3444331            1222247899999999999999999999875

>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Merlin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00029  Score=51.00  Aligned_cols=63  Identities=17%  Similarity=0.180  Sum_probs=46.9

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh---h----------HHHH-----HHHHhhCCCCCHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF---K----------GKAK-----WEAWESRKGQSKDDAQAAYIAK  198 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~---~----------graK-----wnAWkqlkgMSkeEAmkeYIel  198 (209)
                      +.+.++-..|-||.- ||.+||++..  .++.++.   .          ...-     -+.|+.++|||+.+|+..||++
T Consensus        29 ~~~~~~a~~LAal~~-Qae~GD~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~I~~~hk~l~G~s~~~A~~~yL~~  107 (111)
T d1h4ra1          29 YCPPEASVLLASYAV-QAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKI  107 (111)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH-HHHhCCCChhhcccchhhhhhcCCchHHHHhhccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            445788899999999 9999998743  3444321   1          1122     3579999999999999999999


Q ss_pred             HHHH
Q psy10470        199 VVEL  202 (209)
Q Consensus       199 VeeL  202 (209)
                      +.+|
T Consensus       108 ~~~L  111 (111)
T d1h4ra1         108 AQDL  111 (111)
T ss_dssp             HTTS
T ss_pred             HhhC
Confidence            8653

>d1gg3a1 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Erythroid membrane protein 4.1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00052  Score=49.43  Aligned_cols=63  Identities=6%  Similarity=-0.037  Sum_probs=47.9

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh----------hHHHHHHHHhhCCCCCHHHHHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF----------KGKAKWEAWESRKGQSKDDAQAAYIAKVVEL  202 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~----------~graKwnAWkqlkgMSkeEAmkeYIelVeeL  202 (209)
                      +.+.++-..|-||-- ||..||++..  .++++..          ....=-+.|++++|||+.+|+..|++++.++
T Consensus        29 ~~~~~~a~~Laal~~-Qae~GD~~~~~~~~~yl~~~~~~p~~~~~~~~~I~~~h~~l~G~s~~~A~~~fL~~~~~l  103 (106)
T d1gg3a1          29 PCSFATLALLGSYTI-QSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKKL  103 (106)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTSCSSCCGGGSCCCSSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHH-HHHhCCCCccccchhhhhHHhcCCccHHHHHHHHHHHHHHccCcCHHHHHHHHHHHHhcC
Confidence            445778889999999 9999999843  2333211          2222347899999999999999999999875

>d1ef1a1 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Moesin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00055  Score=49.58  Aligned_cols=63  Identities=16%  Similarity=0.098  Sum_probs=47.3

Q ss_pred             CCCcchhhhHHHhhhcccccCCCCCC--CCCCCCh---h---------------HHHHHHHHhhCCCCCHHHHHHHHHHH
Q psy10470        139 IFGKPGMLDFKGKAKWEAWESRKGRS--KPGMLDF---K---------------GKAKWEAWESRKGQSKDDAQAAYIAK  198 (209)
Q Consensus       139 ~~s~d~kL~LYALYK~QAT~Gdcn~~--kPG~~D~---~---------------graKwnAWkqlkgMSkeEAmkeYIel  198 (209)
                      +.+.++...|-||-- ||.+||++..  .++.+..   .               .+.=.+.|+.++|||+.+|+..||++
T Consensus        29 ~~~~~~a~~Laal~~-Qae~GD~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~h~~l~g~s~~~A~~~fL~~  107 (111)
T d1ef1a1          29 YCPPETAVLLASYAV-QSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKI  107 (111)
T ss_dssp             CCCHHHHHHHHHHHH-HHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH-HHHhCCCCcccccHHHHHHHhcCchHHHhcccccHHHHHHHHHHHHHHcCCcCHHHHHHHHHHH
Confidence            455788899999999 9999998744  3444322   1               11123789999999999999999999


Q ss_pred             HHHH
Q psy10470        199 VVEL  202 (209)
Q Consensus       199 VeeL  202 (209)
                      +.+|
T Consensus       108 ~~~L  111 (111)
T d1ef1a1         108 AQDL  111 (111)
T ss_dssp             HTTS
T ss_pred             HhcC
Confidence            8653

>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Focal adhesion kinase 1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=93.29  E-value=0.031  Score=40.49  Aligned_cols=62  Identities=5%  Similarity=-0.007  Sum_probs=42.9

Q ss_pred             CCcchhhhHHHhhhcccccCCCCCCCCC----------------CCC--------hh--HHHHHHHHhhCCCCCHHHHHH
Q psy10470        140 FGKPGMLDFKGKAKWEAWESRKGRSKPG----------------MLD--------FK--GKAKWEAWESRKGQSKDDAQA  193 (209)
Q Consensus       140 ~s~d~kL~LYALYK~QAT~Gdcn~~kPG----------------~~D--------~~--graKwnAWkqlkgMSkeEAmk  193 (209)
                      .+.|.-++|=||-- |+-.||++.....                ++.        ..  .+.=...|++++|||++||+-
T Consensus        33 ~~~e~Ai~Laal~~-Q~~~gd~~~~~~~~~~~~~~~~~~~~L~~flP~~~l~~~~~~~~~k~I~~~~k~~~gls~~eA~~  111 (123)
T d2al6a1          33 VDQEIALKLGCLEI-RRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL  111 (123)
T ss_dssp             SCHHHHHHHHHHHH-HHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred             CCHHHHHHHHHHHH-HHHHhccchhhcccccccchhhhhhhHHhcCChHHHhhcccHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            34555677888888 9999998744210                111        01  111247899999999999999


Q ss_pred             HHHHHHHHH
Q psy10470        194 AYIAKVVEL  202 (209)
Q Consensus       194 eYIelVeeL  202 (209)
                      +|++++.++
T Consensus       112 ~fL~~~~~l  120 (123)
T d2al6a1         112 KFFEILSPV  120 (123)
T ss_dssp             HHHHHHTTT
T ss_pred             HHHHHHHhc
Confidence            999998764