Psyllid ID: psy10513

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MSSDCKGSSNDPPPKKDKPKCESTRHEPTKENKPCKETKPKSKKSSEPTQSSQHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKFSMHGNDNGE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccEEEEcccccccccccEEEEccHHHHHHHHcccccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccccccccccc
Coil and Loop (DISEMBL)
mssdckgssndpppkkdkpkcestrheptkenkpcketkpkskksseptqssqhspdslgktERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRggqlrltsieapskqewNTVEDLLTEALHMEKQLNEKLLKLHACAsqhgdanltdfLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDrdlmsgkfsmhgndnge
Flexible Loop (DISEMBL)
mssdckgssndpppkkdkpkcestrheptkenkpcketkpkskksseptqssqhspdslgKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTsieapskqewNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVdrdlmsgkfsmhgndnge
Low Complexity Region (SEG)
MSSDCKGSSNdpppkkdkpkCESTRHEPTKENKPCketkpkskksseptqssqHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKFSMHGNDNGE
Disordered region (IsUnstruct)
********************************************************************NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLM*************
Disordered Region (DISOPRED)
****************************************************************QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLM*************
Disordered Region (DISEMBL)
*************************************************************TERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKFSMHGNDNGE
Disordered Region (DISPRO)
***************************PTKENK*CKETKPKSKKSSEPTQSSQHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLM*************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSSDCKGSSNDPPPKKDKPKCESTRHEPTKENKPCKETKPKSKKSSEPTQSSQHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKFSMHGNDNGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	239	2.2.26 [Sep-21-2011]
P85837	174	Ferritin, heavy subunit O	N/A	N/A	0.644	0.885	0.474	6e-35
P85838	174	Ferritin, heavy subunit O	N/A	N/A	0.644	0.885	0.467	1e-34
P85835	176	Ferritin, middle subunit	N/A	N/A	0.690	0.937	0.424	5e-34
P85836	176	Ferritin, liver middle su	N/A	N/A	0.690	0.937	0.424	7e-34
P42577	174	Soma ferritin OS=Lymnaea	N/A	N/A	0.682	0.936	0.431	2e-33
P07797	173	Ferritin, lower subunit O	N/A	N/A	0.640	0.884	0.450	5e-33
P85839	176	Ferritin, spleen middle s	N/A	N/A	0.690	0.937	0.418	1e-32
P49946	177	Ferritin, heavy subunit O	N/A	N/A	0.631	0.853	0.450	1e-32
P49947	176	Ferritin, middle subunit	N/A	N/A	0.698	0.948	0.425	5e-32
P08267	180	Ferritin heavy chain OS=G	yes	N/A	0.631	0.838	0.443	1e-31

>sp|P85837|FRIH_TRENE Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1

 Score =  147 bits (371), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 100/154 (64%)

Query: 62  TERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEI 121
            E Q  QNFH+DC   IN QIN E+ ++Y+Y+SMA +  +D+VAL GFA FF H  +EE 
Sbjct: 1   MESQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEER 60

Query: 122 EHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQ 181
           EH E L+   N+RGG++ L  ++ P + EW +  D L  AL +EK +N+ LL LH   S+
Sbjct: 61  EHAEKLMKQQNQRGGRIFLQDVKKPDRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSE 120

Query: 182 HGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
           H D ++ DFLE  YL EQV +IK L D +T +RR
Sbjct: 121 HNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRR 154

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.
Trematomus newnesi (taxid: 35730)
EC: 1EC: .EC: 1EC: 6EC: .EC: 3EC: .EC: 1

>sp|P85838|FRIH_TREBE Ferritin, heavy subunit OS=Trematomus bernacchii PE=1 SV=1

 Score =  146 bits (369), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 100/154 (64%)

Query: 62  TERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEI 121
            E Q  QNFH+DC   IN QIN E+ ++Y+Y+SMA +  +D+VAL GFA FF    +EE 
Sbjct: 1   MESQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEER 60

Query: 122 EHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQ 181
           EH E L+ + N+RGG++ L  ++ P + EW +  D L  AL +EK +N+ LL LH   S+
Sbjct: 61  EHAEKLLKFQNQRGGRIFLQDVKKPDRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSE 120

Query: 182 HGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
           H D ++ DFLE  YL EQV +IK L D +T +RR
Sbjct: 121 HNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRR 154

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.

Trematomus bernacchii (taxid: 40690)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P85835|FRIM_TRENE Ferritin, middle subunit OS=Trematomus newnesi PE=1 SV=1

 Score =  144 bits (364), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 7/172 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  IN E+ ++Y+Y SMA + ++D+VAL GFA FF  + +EE EH 
Sbjct: 4   QVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSEEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           + L+ + N RGG++ L  I+ P + EW +  D L  +L +EK +N+ LL LH  AS H D
Sbjct: 64  DKLLTFQNSRGGRIFLQDIKKPERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTD 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDRDLMSGK 229
            ++ DFLE  YL EQV++IK L D +T + R          YL D+  M GK
Sbjct: 124 PHMCDFLETHYLNEQVESIKKLGDFITNLSRMDAVKNKMAEYLFDKHTMGGK 175

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Trematomus newnesi (taxid: 35730)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P85836|FRIML_TREBE Ferritin, liver middle subunit OS=Trematomus bernacchii PE=1 SV=1

 Score =  144 bits (362), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 103/172 (59%), Gaps = 7/172 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  IN E+ ++Y+Y SMA + ++D+VAL GFA FF  +  EE EH 
Sbjct: 4   QVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           + L+ + N RGG++ L  I+ P + EW +  D L  +L +EK +N+ LL LH  AS H D
Sbjct: 64  DKLLTFQNSRGGRIFLQDIKKPERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTD 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDRDLMSGK 229
            ++ DFLE  YL EQV++IK L D +T + R          YL D+  M GK
Sbjct: 124 PHMCDFLETHYLNEQVESIKKLGDFITNLSRMDAVKNKMAEYLFDKHTMGGK 175

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Trematomus bernacchii (taxid: 40690)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P42577|FRIS_LYMST Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2

 Score =  142 bits (358), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 4/167 (2%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H +    IN QIN E+ ++Y+Y SMA +  +D+VAL GF KFF H  +EE EH 
Sbjct: 5   QARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHA 64

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+ Y NKRGG++ L  I+ P + EW T  + +  AL +EK +N+ LL LH   + H D
Sbjct: 65  EKLMKYQNKRGGRIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDD 124

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT----QLYLVDRDLMS 227
           A + DFLE  +L+EQV +IK L+D +T ++R       Y+ D++ +S
Sbjct: 125 AQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYIFDKETLS 171

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Lymnaea stagnalis (taxid: 6523)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P07797|FRI3_LITCT Ferritin, lower subunit OS=Lithobates catesbeiana PE=1 SV=1

 Score =  141 bits (355), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 99/153 (64%)

Query: 63  ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIE 122
           E Q  QNFH+DC   +N  +N +  S+Y Y+SMAS+  +D+VAL  FAKFF    +EE E
Sbjct: 2   ESQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKE 61

Query: 123 HMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           H E LI Y N+RGG++ L S+E P + +W    + L  AL ++K +N+ LL LHA A+  
Sbjct: 62  HAEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADK 121

Query: 183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            D ++TDFLE  YL E V+ IK L D +T++++
Sbjct: 122 SDPHMTDFLESPYLSESVETIKKLGDHITSLKK 154

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Lithobates catesbeiana (taxid: 8400)

>sp|P85839|FRIMS_TREBE Ferritin, spleen middle subunit OS=Trematomus bernacchii PE=1 SV=1

 Score =  139 bits (351), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 7/172 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  IN E+ ++Y+Y SMA + ++D+VAL GFA FF  +  EE EH 
Sbjct: 4   QVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           + L+ + N RGG++ L  I+ P + EW    D++  AL +EK +N+ LL LH  AS   D
Sbjct: 64  DKLLTFQNSRGGRIFLQDIKKPERDEWGNGVDVMQCALQLEKNVNQALLDLHKIASGKVD 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDRDLMSGK 229
            ++ DFLE  YL EQV++IK L D +T + R          YL D+  M GK
Sbjct: 124 PHMCDFLETHYLNEQVESIKKLGDFITNLSRMDAVKNKMAEYLFDKHTMGGK 175

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Trematomus bernacchii (taxid: 40690)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P49946|FRIH_SALSA Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1

 Score =  139 bits (351), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 96/151 (63%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QNFH+DC   IN QIN E+ ++Y Y+SMA +  +D+ AL  FAKFF +   EE EH 
Sbjct: 4   QVRQNFHQDCEAAINRQINLELYASYVYLSMAYYFDRDDQALHNFAKFFKNQSHEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  ++ P K EW +  + L  +L +EK +N+ LL LH   S+H D
Sbjct: 64  EKLMKVQNQRGGRIFLQDVKKPEKDEWGSGVEALESSLQLEKSVNQSLLDLHKVCSEHND 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            ++ DF+E  YL EQV +IK L D +T +RR
Sbjct: 124 PHMCDFIETHYLDEQVKSIKELGDWVTNLRR 154

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Salmo salar (taxid: 8030)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P49947|FRIM_SALSA Ferritin, middle subunit OS=Salmo salar PE=2 SV=1

 Score =  137 bits (346), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 7/174 (4%)

Query: 63  ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIE 122
           E Q  QN+H DC   IN  IN E+ ++YTY SMA + ++D+VAL GFA FF  + +EE E
Sbjct: 2   ESQIRQNYHHDCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEERE 61

Query: 123 HMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           H + L+++ NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  AS  
Sbjct: 62  HADKLLSFQNKRGGRILLQDIKKPERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDK 121

Query: 183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDRDLMSGK 229
            D +L DFLE  YL EQV+AIK L D +T + +          YL D+  + G+
Sbjct: 122 VDPHLCDFLETHYLNEQVEAIKKLGDHITNLTKMDAVKNKMAEYLFDKHTLGGQ 175

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Salmo salar (taxid: 8030)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P08267|FRIH_CHICK Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 SV=2

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 97/151 (64%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+DC   IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 7   QVRQNYHQDCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 66

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P + +W      +  ALH+EK +N+ LL+LH  A++  D
Sbjct: 67  EKLMKLQNQRGGRIFLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKND 126

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 127 PHLCDFIETHYLDEQVKAIKQLGDHVTNLRK 157

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
91081285	172	PREDICTED: similar to ferritin GF1 [Trib	0.686	0.953	0.511	8e-39
383850754	213	PREDICTED: soma ferritin-like [Megachile	0.719	0.807	0.472	7e-38
149689086	172	ferritin [Triatoma infestans]	0.682	0.947	0.467	9e-38
332016429	169	Soma ferritin [Acromyrmex echinatior]	0.661	0.934	0.481	1e-37
46561742	172	putative ferritin GF2 [Homalodisca vitri	0.682	0.947	0.458	1e-37
53830706	172	putative ferritin [Oncometopia nigricans	0.682	0.947	0.452	9e-37
351602050	170	ferritin peptide [Fenneropenaeus indicus	0.673	0.947	0.487	2e-36
307167794	171	Soma ferritin [Camponotus floridanus]	0.661	0.923	0.462	2e-36
61744051	170	ferritin [Litopenaeus vannamei]	0.673	0.947	0.487	4e-36
145424173	170	ferritin [Penaeus monodon]	0.635	0.894	0.506	7e-36

>gi|91081285|ref|XP_967895.1| PREDICTED: similar to ferritin GF1 [Tribolium castaneum] gi|270005213|gb|EFA01661.1| hypothetical protein TcasGA2_TC007233 [Tribolium castaneum]

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 4/168 (2%)

Query: 62  TERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEI 121
            + Q  QNFH+DC D IN QIN E+ + YTY+SMA    +D+VAL G  K+F     EE 
Sbjct: 2   AQSQVRQNFHKDCEDAINKQINVELNAFYTYLSMAYHFQRDDVALPGLYKYFKACSDEER 61

Query: 122 EHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQ 181
           +H   L+ YLNKRGG+L LT I AP KQ+W T ++ +  AL +EK++NE LL LH+ AS 
Sbjct: 62  DHAHKLMEYLNKRGGRLALTDIPAPEKQDWGTAQEAMCAALDLEKRVNESLLVLHSTASG 121

Query: 182 HGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT----QLYLVDRDL 225
           H D NL DFLE  YLQEQVDAIK +AD +T ++R      +Y+ DR L
Sbjct: 122 HMDVNLCDFLETHYLQEQVDAIKEIADHVTNLKRVGEGLGVYMFDRTL 169

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850754|ref|XP_003700941.1| PREDICTED: soma ferritin-like [Megachile rotundata]

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 10/182 (5%)

Query: 48  PTQSSQHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALF 107
           PT S   +  SL +      QNFHEDC   +N QIN E+ ++Y Y+SMA +  + +VAL 
Sbjct: 36  PTYSLAQNIMSLVR------QNFHEDCELALNKQINMELYASYVYLSMAYYFNRSDVALP 89

Query: 108 GFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQ 167
           G  K+F  +  EE EH    +AY NKRGG + LT+IE+P K  WN  +D ++EAL +EK+
Sbjct: 90  GLYKYFKKASDEEREHAMKFMAYQNKRGGNIILTTIESPPKNNWNAAKDAMSEALDLEKK 149

Query: 168 LNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT----QLYLVDR 223
           +NE LL+LHA AS H D N  DFLE  YLQEQVD+IK +AD +T + R      +Y+ DR
Sbjct: 150 VNESLLELHALASSHNDPNFLDFLETEYLQEQVDSIKEIADHVTNLERVGEGLGVYIFDR 209

Query: 224 DL 225
           +L
Sbjct: 210 EL 211

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|149689086|gb|ABR27877.1| ferritin [Triatoma infestans]

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 78/167 (46%), Positives = 111/167 (66%), Gaps = 4/167 (2%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QNFH D  + IN +IN E+ ++Y Y+SMA    +D++AL GF K+F  + +EE EH 
Sbjct: 5   QVRQNFHTDSENAINQRINMELYASYVYLSMAYHFDRDDIALEGFHKYFKKASEEEREHA 64

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             L+ YLNKRGG++ L  +  P+K +W T E+ +  AL +EK +N  LL LH  A  HGD
Sbjct: 65  MKLMKYLNKRGGRILLKDVSQPAKNDWGTAEEAVASALQLEKDVNMSLLTLHGIAGSHGD 124

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ----LYLVDRDLMS 227
           ANL DF+E  YLQEQVD+IK+L DLLT ++R      ++++D++L S
Sbjct: 125 ANLQDFIETEYLQEQVDSIKSLGDLLTNIKRVAEGLGIFVLDKELKS 171

Source: Triatoma infestans

Species: Triatoma infestans

Genus: Triatoma

Family: Reduviidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016429|gb|EGI57342.1| Soma ferritin [Acromyrmex echinatior]

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 111/162 (68%), Gaps = 4/162 (2%)

Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           QNFHE+C D +N QIN E+ ++Y Y+SMA +  + +VAL G  K+F  +  EE EH    
Sbjct: 6   QNFHEECEDALNKQINLELYASYVYLSMAYYFDRSDVALPGLYKYFKKASDEEREHAMKF 65

Query: 128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
           + Y NKRGG + LT I+APS++ WN+ +D + EAL +EK++N+KLL+LH  AS H DAN 
Sbjct: 66  LTYQNKRGGDVVLTDIQAPSRRNWNSAKDAMMEALQLEKRVNQKLLELHGIASTHNDANF 125

Query: 188 TDFLEGRYLQEQVDAIKTLADLLTTVRRT----QLYLVDRDL 225
            DFLE  +LQEQVDAIK +AD +T + R      +++ D++L
Sbjct: 126 MDFLETEFLQEQVDAIKEIADHVTNLERVGEGLGVFIYDKEL 167

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|46561742|gb|AAT01076.1| putative ferritin GF2 [Homalodisca vitripennis]

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 110/168 (65%), Gaps = 5/168 (2%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QNFHED  + IN QIN E+ ++Y Y+SMA +  +D+VAL G +++F  S  EE EH 
Sbjct: 5   QVRQNFHEDSENGINKQINMELYASYVYLSMAYYFDRDDVALHGISEYFRKSSDEEREHA 64

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           + L+ YLNKRGG++ L  ++ P + +W   E+  T ALH+EK +N  LL LH   + H D
Sbjct: 65  QKLMKYLNKRGGRIVLFDVKQPPRNDWGNAEEAFTAALHLEKDVNTSLLSLHQIGTIHND 124

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-----QLYLVDRDLMS 227
           ANL D+LE  +LQEQVD+IK++ DLLT +RR       +Y+ D++  S
Sbjct: 125 ANLCDYLESEFLQEQVDSIKSIGDLLTNIRRVGKDGLGIYIFDKEFKS 172

Source: Homalodisca vitripennis

Species: Homalodisca vitripennis

Genus: Homalodisca

Family: Cicadellidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|53830706|gb|AAU95196.1| putative ferritin [Oncometopia nigricans]

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 110/168 (65%), Gaps = 5/168 (2%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QNFHED  + IN QIN E+ ++Y Y+SMA +  +D+VAL G +++F  S  EE EH 
Sbjct: 5   QVRQNFHEDSENGINKQINMELYASYVYLSMAYYFDRDDVALHGISEYFRKSSDEEREHA 64

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           + L+ YLNKRGG++ L  ++ P + +W+  E+  T AL +EK +N  LL LH   + H D
Sbjct: 65  QKLMKYLNKRGGKIVLFDVKQPPRNDWSNAEEAFTAALQLEKDVNTSLLSLHQIGTIHND 124

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-----QLYLVDRDLMS 227
           ANL D+LE  +LQEQVD+IK++ DLLT +RR       +Y+ D++  S
Sbjct: 125 ANLCDYLESEFLQEQVDSIKSIGDLLTNIRRVGKEGLGIYIFDKEFKS 172

Source: Oncometopia nigricans

Species: Oncometopia nigricans

Genus: Oncometopia

Family: Cicadellidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|351602050|gb|AEQ53930.1| ferritin peptide [Fenneropenaeus indicus]

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/166 (48%), Positives = 109/166 (65%), Gaps = 5/166 (3%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+HEDC   IN QIN E+ ++Y Y+SMA +  +D+VAL GFAKFF  S  EE EH 
Sbjct: 4   QVRQNYHEDCEASINKQINMELYASYVYLSMAHYFERDDVALPGFAKFFKDSSDEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           +  + Y NKRGG++ L  I APS QEW T  D L  AL +EKQ+N+ LL+LH  AS + D
Sbjct: 64  QIFMKYQNKRGGRIVLQQIAAPSMQEWGTGLDALQAALDLEKQVNQSLLELHGTASGNND 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-----QLYLVDRDL 225
            +LT  LE  YL+EQVD+IK + D++T ++R        Y+ D++L
Sbjct: 124 PHLTKLLEDEYLEEQVDSIKKIGDMITRLKRAGPAGLGEYMFDKEL 169

Source: Fenneropenaeus indicus

Species: Fenneropenaeus indicus

Genus: Fenneropenaeus

Family: Penaeidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167794|gb|EFN61239.1| Soma ferritin [Camponotus floridanus]

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 111/162 (68%), Gaps = 4/162 (2%)

Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           QNFHE+C + IN QIN E+ ++Y Y+SMA +  + +VAL G  K+F  +  EE EH    
Sbjct: 6   QNFHEECEEGINKQINLELYASYVYLSMAYYFDRSDVALTGLYKYFKKASDEEREHAMKF 65

Query: 128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
           + Y NKRGG + LT I+AP++++WN+ +D +TEAL +EK++N+ LL LH  A+ H DAN 
Sbjct: 66  LTYQNKRGGDIVLTDIQAPARRDWNSAKDAMTEALQLEKKVNQNLLDLHRIATTHDDANF 125

Query: 188 TDFLEGRYLQEQVDAIKTLADLLTTVRRT----QLYLVDRDL 225
            DFLE  +LQEQVDAIK ++D +T + R      +++ D++L
Sbjct: 126 MDFLETEFLQEQVDAIKEISDHVTNLERVGEGLGIFIFDKEL 167

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|61744051|gb|AAX55641.1| ferritin [Litopenaeus vannamei]

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/166 (48%), Positives = 109/166 (65%), Gaps = 5/166 (3%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+HEDC   IN QIN E+ ++Y Y+SMA +  +D+VAL GFAKFF  S  EE EH 
Sbjct: 4   QVRQNYHEDCEASINKQINMELYASYVYLSMAYYFERDDVALPGFAKFFKDSSDEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           +  + Y NKRGG++ L  I APS QEW T  + L  AL +EKQ+N+ LL+LH  AS + D
Sbjct: 64  QIFMKYQNKRGGRIVLQQIAAPSMQEWGTGLEALQAALDLEKQVNQSLLELHGTASGNND 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-----QLYLVDRDL 225
            +LT  LE  YL+EQVD+IK + D++T ++R        YL D++L
Sbjct: 124 PHLTKLLEDEYLEEQVDSIKKIGDMITKLKRAGPAGLGEYLFDKEL 169

Source: Litopenaeus vannamei

Species: Litopenaeus vannamei

Genus: Litopenaeus

Family: Penaeidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|145424173|gb|ABP68819.1| ferritin [Penaeus monodon]

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 77/152 (50%), Positives = 103/152 (67%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+HEDC   IN QIN E+ ++Y Y+SMA +  +D+VAL GFAKFF  S  EE EH 
Sbjct: 4   QVRQNYHEDCEASINKQINMELYASYVYLSMAHYFERDDVALPGFAKFFKESSDEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           +  + Y NKRGG++ L  I APS QEW T  + L  AL +EKQ+N+ LL+LH  AS + D
Sbjct: 64  QIFMKYQNKRGGRIVLQQIAAPSMQEWGTGLEALQAALDLEKQVNQSLLELHGTASGNND 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT 216
            +LT  LE  YL+EQVD+IK + D++T ++R 
Sbjct: 124 PHLTKLLEDEYLEEQVDSIKKIGDMITKLKRA 155

Source: Penaeus monodon

Species: Penaeus monodon

Genus: Penaeus

Family: Penaeidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
ZFIN|ZDB-GENE-000831-2	177	fth1a "ferritin, heavy polypep	0.631	0.853	0.456	4.7e-32
UNIPROTKB|F1NL14	209	FTH1 "Ferritin" [Gallus gallus	0.673	0.770	0.438	2e-31
UNIPROTKB|P08267	180	FTH "Ferritin heavy chain" [Ga	0.631	0.838	0.443	3.3e-31
UNIPROTKB|Q8MIP0	182	FTH1 "Ferritin heavy chain" [E	0.631	0.829	0.456	6.9e-31
ZFIN|ZDB-GENE-040718-72	226	zgc:92066 "zgc:92066" [Danio r	0.619	0.654	0.472	1.1e-30
UNIPROTKB|Q8N4E7	242	FTMT "Ferritin, mitochondrial"	0.702	0.694	0.424	1.8e-30
ZFIN|ZDB-GENE-030131-7540	175	zgc:198419 "zgc:198419" [Danio	0.631	0.862	0.463	2.3e-30
UNIPROTKB|Q920K4	182	Fth1 "Ferritin" [Cavia porcell	0.631	0.829	0.437	3e-30
UNIPROTKB|Q9XT73	183	FTH1 "Ferritin heavy chain" [T	0.631	0.825	0.437	3e-30
UNIPROTKB|P29389	186	FTH1 "Ferritin heavy chain" [C	0.631	0.811	0.430	4.9e-30

ZFIN|ZDB-GENE-000831-2 fth1a "ferritin, heavy polypeptide 1a" [Danio rerio (taxid:7955)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 69/151 (45%), Positives = 96/151 (63%)

Query:    65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
             Q  QNF E C   +N QIN E+ ++Y Y+SM+ +  +D+ AL  FAKFF H   EE EH 
Sbjct:     4 QVRQNFEEACEAAVNRQINMELYASYVYLSMSYYFDRDDQALHNFAKFFRHQSHEEREHA 63

Query:   125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             E L+ + N+RGG++ L  ++ P K EW +  + L  AL +EK +N  LL+LH  ASQH D
Sbjct:    64 EKLMKFQNQRGGRIFLQDVKKPEKDEWGSGVEALECALQLEKSVNHSLLELHKLASQHND 123

Query:   185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              ++ DF+E  YL EQV +IK L D +T +RR
Sbjct:   124 PHMCDFIETHYLDEQVKSIKELGDHVTNLRR 154

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NL14 FTH1 "Ferritin" [Gallus gallus (taxid:9031)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 71/162 (43%), Positives = 101/162 (62%)

Query:    55 SPDSLGKTE-RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFF 113
             SP S   T   Q  QN+H+DC   IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F
Sbjct:    25 SPASAMATPPSQVRQNYHQDCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYF 84

Query:   114 THSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLL 173
              H   EE EH E L+   N+RGG++ L  I+ P + +W      +  ALH+EK +N+ LL
Sbjct:    85 LHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLL 144

Query:   174 KLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
             +LH  A++  D +L DF+E  YL EQV AIK L D +T +R+
Sbjct:   145 ELHKLATEKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRK 186

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

UNIPROTKB|P08267 FTH "Ferritin heavy chain" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 67/151 (44%), Positives = 97/151 (64%)

Query:    65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
             Q  QN+H+DC   IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct:     7 QVRQNYHQDCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 66

Query:   125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             E L+   N+RGG++ L  I+ P + +W      +  ALH+EK +N+ LL+LH  A++  D
Sbjct:    67 EKLMKLQNQRGGRIFLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKND 126

Query:   185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              +L DF+E  YL EQV AIK L D +T +R+
Sbjct:   127 PHLCDFIETHYLDEQVKAIKQLGDHVTNLRK 157

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0004322 "ferroxidase activity" evidence=IEA

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

UNIPROTKB|Q8MIP0 FTH1 "Ferritin heavy chain" [Equus caballus (taxid:9796)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 69/151 (45%), Positives = 95/151 (62%)

Query:    65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
             Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct:     8 QVRQNYHQDSEAAINRQINLELHASYVYLSMSFYFDRDDVALKNFAKYFLHQSHEEREHA 67

Query:   125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             E L+   N+RGG++ L  I+ P + +W      +  ALH+EK +NE LL+LH  A+   D
Sbjct:    68 EKLMKLQNQRGGRIFLQDIKKPDQDDWENGLKAMECALHLEKNVNESLLELHKLATDKND 127

Query:   185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              +L DFLE  YL EQV AIK L D +T +RR
Sbjct:   128 PHLCDFLETHYLNEQVKAIKELGDHVTNLRR 158

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

ZFIN|ZDB-GENE-040718-72 zgc:92066 "zgc:92066" [Danio rerio (taxid:7955)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/148 (47%), Positives = 94/148 (63%)

Query:    68 QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
             QN+  DC   IN  IN E+ + YTY SMA +  +D+VAL GFAKFF  + +EE EH E  
Sbjct:    59 QNYDRDCEALINKMINLELYAGYTYTSMAFYFDRDDVALPGFAKFFKKNSEEEREHAEKF 118

Query:   128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
             + + NKRGG++ L  I+ P + EW+     +  AL +EK +N+ LL LH  ASQ GD +L
Sbjct:   119 MEFQNKRGGRIVLQDIKKPERDEWDNGLTAMQCALQLEKNVNQALLDLHKVASQKGDPHL 178

Query:   188 TDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              DFLE  YL EQV+AIK L D +T + +
Sbjct:   179 CDFLETHYLNEQVEAIKKLGDHITNLSK 206

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q8N4E7 FTMT "Ferritin, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 73/172 (42%), Positives = 105/172 (61%)

Query:    68 QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
             QNFH D    IN QIN E+ ++Y Y+SMA + ++D+VAL  F+++F H  +EE EH E L
Sbjct:    70 QNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKL 129

Query:   128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
             +   N+RGG++RL  I+ P + +W +    +  AL +EK +N+ LL+LHA AS  GD +L
Sbjct:   130 MRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHL 189

Query:   188 TDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKFSMH--GNDN 237
              DFLE  YL EQV +IK L D +  +   ++   D  L    F  H  GN+N
Sbjct:   190 CDFLETYYLNEQVKSIKELGDHVHNL--VKMGAPDAGLAEYLFDTHTLGNEN 239

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0004322 "ferroxidase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IDA

GO:0051347 "positive regulation of transferase activity" evidence=IDA

GO:0051349 "positive regulation of lyase activity" evidence=IDA

GO:0051353 "positive regulation of oxidoreductase activity" evidence=IDA

ZFIN|ZDB-GENE-030131-7540 zgc:198419 "zgc:198419" [Danio rerio (taxid:7955)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 70/151 (46%), Positives = 94/151 (62%)

Query:    65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
             Q  QN+  DC   IN  IN E+ + YTY SMA +  +D+VAL GFAKFF  + +EE EH 
Sbjct:     5 QIRQNYDSDCEASINKMINLELYAGYTYTSMAHYFKRDDVALNGFAKFFKKNSEEEREHA 64

Query:   125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             E  + + NKRGG++ L  I+ P +  W+     +  AL +EK +N+ LL LH  ASQ GD
Sbjct:    65 EKFMEFQNKRGGRIVLQDIKKPDRDVWDNGLIAMQCALQLEKNVNQALLDLHKVASQKGD 124

Query:   185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              +L DFLE  YL EQV+AIK L D +T + +
Sbjct:   125 PHLCDFLETHYLDEQVEAIKKLGDHITNLSK 155

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q920K4 Fth1 "Ferritin" [Cavia porcellus (taxid:10141)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 66/151 (43%), Positives = 96/151 (63%)

Query:    65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
             Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct:     8 QVRQNYHQDAEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 67

Query:   125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             E L+   N+RGG++ L  I+ P + +W    + +  ALH+EK +N+ LL+LH  A+   D
Sbjct:    68 EKLMKLQNQRGGRIFLQDIKKPDRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKND 127

Query:   185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              +L DF+E  YL EQV AIK L D +T +R+
Sbjct:   128 PHLCDFIETHYLDEQVKAIKELGDHVTNLRK 158

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

UNIPROTKB|Q9XT73 FTH1 "Ferritin heavy chain" [Trichosurus vulpecula (taxid:9337)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 66/151 (43%), Positives = 97/151 (64%)

Query:    65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
             Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct:     8 QVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 67

Query:   125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             E L+   N+RGG++ L  I+ P + +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct:    68 EKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKNVNQSLLELHKLATDKND 127

Query:   185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              +L DF+E  YL EQV AIK L D +T +R+
Sbjct:   128 PHLCDFIETHYLDEQVKAIKQLGDHVTNLRK 158

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

UNIPROTKB|P29389 FTH1 "Ferritin heavy chain" [Cricetulus griseus (taxid:10029)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 65/151 (43%), Positives = 97/151 (64%)

Query:    65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
             Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct:    13 QVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHA 72

Query:   125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             E L+   N+RGG++ L  I+ P + +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct:    73 EKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKND 132

Query:   185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
              +L DF+E  YL EQV +IK L D +T +R+
Sbjct:   133 PHLCDFIETHYLNEQVKSIKELGDHVTNLRK 163

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P09528	FRIH_MOUSE	1, ., 1, 6, ., 3, ., 1	0.4304	0.6317	0.8296	yes	N/A
P08267	FRIH_CHICK	1, ., 1, 6, ., 3, ., 1	0.4437	0.6317	0.8388	yes	N/A
P19976	FRI1_SOYBN	1, ., 1, 6, ., 3, ., 1	0.3842	0.7698	0.736	yes	N/A
P19132	FRIH_RAT	1, ., 1, 6, ., 3, ., 1	0.4304	0.6317	0.8296	yes	N/A
O46414	FRIH_BOVIN	1, ., 1, 6, ., 3, ., 1	0.4238	0.6317	0.8342	yes	N/A
Q5R8J7	FRIH_PONAB	1, ., 1, 6, ., 3, ., 1	0.4437	0.6317	0.8251	yes	N/A
Q95MP7	FRIH_CANFA	1, ., 1, 6, ., 3, ., 1	0.4304	0.6317	0.8251	yes	N/A
Q8N4E7	FTMT_HUMAN	1, ., 1, 6, ., 3, ., 1	0.3989	0.7698	0.7603	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.16.3.1	0.824
3rd Layer	1.16.3	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	239
cd01056	161	cd01056, Euk_Ferritin, eukaryotic ferritins	4e-57
cd00904	160	cd00904, Ferritin, Ferritin iron storage proteins	3e-38
pfam00210	142	pfam00210, Ferritin, Ferritin-like domain	2e-34
cd01055	156	cd01055, Nonheme_Ferritin, nonheme-containing ferr	7e-34
COG1528	167	COG1528, Ftn, Ferritin-like protein [Inorganic ion	2e-25
PRK10304	165	PRK10304, PRK10304, ferritin; Provisional	6e-11
PRK15022	167	PRK15022, PRK15022, ferritin-like protein; Provisi	9e-07
pfam05478	807	pfam05478, Prominin, Prominin	0.003

>gnl|CDD|153114 cd01056, Euk_Ferritin, eukaryotic ferritins

 Score =  178 bits (454), Expect = 4e-57
 Identities = 71/145 (48%), Positives = 98/145 (67%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
           HE+C   +N QIN E+ ++Y Y+SMA++  +D+VAL GFAKFF     EE EH E LI Y
Sbjct: 1   HEECEAALNKQINLELNASYVYLSMAAYFDRDDVALPGFAKFFRKLSDEEREHAEKLIKY 60

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
            NKRGG++ L  I+ P K EW +  + L  AL +EK +N+ LL LH  AS+H D +L DF
Sbjct: 61  QNKRGGRVVLQDIKKPEKDEWGSGLEALELALDLEKLVNQSLLDLHKLASEHNDPHLADF 120

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRR 215
           LE  +L+EQV++IK LA  +T ++R
Sbjct: 121 LESEFLEEQVESIKKLAGYITNLKR 145

Eukaryotic Ferritin (Euk_Ferritin) domain. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged residues on the protein shell inner surface of the L subunits promote ferrihydrite nucleation. Most plant ferritins combine both oxidase and nucleation functions in one chain: they have four interior glutamate residues as well as seven ferroxidase center residues. Length = 161

>gnl|CDD|153098 cd00904, Ferritin, Ferritin iron storage proteins

 Score =  130 bits (328), Expect = 3e-38
 Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 4/160 (2%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
            E     +N Q+N E+ ++YTY+SMA++  +D+VAL G A FF    +EE EH E    Y
Sbjct: 1   SEKVEAAVNRQLNLELYASYTYLSMATYFDRDDVALKGVAHFFKEQAQEEREHAEKFYKY 60

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
            N+RGG++ L  IE P   EW    D +  AL +EK +N+ LL LH  AS+  D +L DF
Sbjct: 61  QNERGGRVELQDIEKPPSDEWGGTLDAMEAALKLEKFVNQALLDLHELASEEKDPHLCDF 120

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKF 230
           LE  +L EQV  IK + D+LT + R    L  +   SG++
Sbjct: 121 LESHFLDEQVKEIKQVGDILTNLER----LNGQQAGSGEY 156

Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged residues on the protein shell inner surface of the L subunits promote ferrihydrite nucleation. Most plant ferritins combine both oxidase and nucleation functions in one chain: they have four interior glutamate residues as well as seven ferroxidase center residues. Length = 160

>gnl|CDD|215791 pfam00210, Ferritin, Ferritin-like domain

 Score =  119 bits (301), Expect = 2e-34
 Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 75  IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR 134
           I+ +N Q+ DE+ ++Y Y+ MA +   D   L G A+FF    +EE EH + L   +   
Sbjct: 1   IEALNEQLADELTASYQYLQMAWYF--DGPGLPGLAEFFDEQAEEEREHADKLAERILAL 58

Query: 135 GGQLRLTSIEAP---SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
           GG+  LT +E        E+ +V + L  AL  EK++ E L +L   A + GD    DFL
Sbjct: 59  GGKPVLTPVELLEIEPPDEFGSVLEALEAALEHEKEVTESLRELIELAEEEGDYATADFL 118

Query: 192 EGRYLQEQVDAIKTLADLLTTVRR 215
           E  +L+EQ +    L  LL  ++R
Sbjct: 119 EW-FLEEQEEHEWFLEALLEKLKR 141

This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Length = 142

>gnl|CDD|153113 cd01055, Nonheme_Ferritin, nonheme-containing ferritins

 Score =  119 bits (300), Expect = 7e-34
 Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 9/160 (5%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
            E     +N QIN E+ S+Y Y++MA++   D+  L GFA FF    +EE EH      Y
Sbjct: 1   SEKLEKALNEQINLELYSSYLYLAMAAWF--DSKGLDGFANFFRVQAQEEREHAMKFFDY 58

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           LN RGG++ L +IEAP   E+ ++ ++   AL  E+++ E +  L   A +  D    +F
Sbjct: 59  LNDRGGRVELPAIEAP-PSEFESLLEVFEAALEHEQKVTESINNLVDLALEEKDYATFNF 117

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRR-----TQLYLVDRDL 225
           L+  +++EQV+      D+L  ++        LY++D++L
Sbjct: 118 LQW-FVKEQVEEEALARDILDKLKLAGDDGGGLYMLDKEL 156

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite. Length = 156

>gnl|CDD|224445 COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]

 Score = 97.4 bits (243), Expect = 2e-25
 Identities = 49/165 (29%), Positives = 89/165 (53%), Gaps = 9/165 (5%)

Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E  I+ +N Q+N E  ++  Y+ MA++C   + +L GFAKF     +EE+ H   L  YL
Sbjct: 4   EKMIELLNEQMNLEFYASNLYLQMAAWC--SSESLPGFAKFLRAQAQEELTHAMKLFNYL 61

Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
           N+RG +  L +IEAP   +++++++L  + L  E+++   + +L   A +  D    +FL
Sbjct: 62  NERGARPELKAIEAP-PNKFSSLKELFEKTLEHEQKVTSSINELAEVAREEKDYATFNFL 120

Query: 192 EGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDLMSGKFS 231
           +  ++ EQV+  K    +L  +         LYL+D++L +   S
Sbjct: 121 QW-FVAEQVEEEKLFKTILDKLELAGNDGEGLYLIDKELKNRASS 164

Length = 167

>gnl|CDD|182367 PRK10304, PRK10304, ferritin; Provisional

 Score = 58.9 bits (142), Expect = 6e-11
 Identities = 44/158 (27%), Positives = 85/158 (53%), Gaps = 9/158 (5%)

Query: 73  DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLN 132
           + I+K+N Q+N E+ S+  Y  M+++C+       G A F     +EE+ HM+ L  YL 
Sbjct: 5   EMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFE--GAAAFLRRHAQEEMTHMQRLFDYLT 62

Query: 133 KRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLE 192
             G   R+ ++E+P   E++++++L  E    E+ + +K+ +L   A  + D    +FL+
Sbjct: 63  DTGNLPRINTVESPFA-EYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQ 121

Query: 193 GRYLQEQVDA---IKTLADLLTTVRRT--QLYLVDRDL 225
             Y+ EQ +     K++ D L+   ++   LY +D++L
Sbjct: 122 W-YVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKEL 158

Length = 165

>gnl|CDD|184983 PRK15022, PRK15022, ferritin-like protein; Provisional

 Score = 47.2 bits (112), Expect = 9e-07
 Identities = 33/152 (21%), Positives = 73/152 (48%), Gaps = 5/152 (3%)

Query: 75  IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR 134
           + K+N+Q+N E  ++  Y+ ++ +C++   +L G A F     +  +  M  +  ++   
Sbjct: 7   LLKLNSQMNLEFYASNLYLHLSEWCSEQ--SLNGTATFLRAQAQSNVTQMMRMFNFMKSA 64

Query: 135 GGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGR 194
           G    + +I+ P  ++ N++E+L  + L   +Q +  L +L   A    D +  +FL   
Sbjct: 65  GATPIVKAIDVPG-EKLNSLEELFQKTLEEYEQRSSTLAQLADEAKALNDDSTLNFLRDL 123

Query: 195 YLQEQVDAI--KTLADLLTTVRRTQLYLVDRD 224
             ++Q D +  +T+ D + + +   L  V  D
Sbjct: 124 EKEQQHDGLLLQTILDEVRSAKLAGLCPVQTD 155

Length = 167

>gnl|CDD|218602 pfam05478, Prominin, Prominin

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 18/130 (13%)

Query: 59  LGKTERQTLQNFHEDCIDKINTQ-INDEIRSAYTYISMASFCTQ-DNVA----------- 105
           L    R+ L++     +D IN      +I+   T +++ SF  + D +A           
Sbjct: 588 LTPEARRNLEDLASSGLDDINFSNFLKQIQKPLTEVNLNSFAEELDALANNLPNGKLKVA 647

Query: 106 LFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHME 165
           L   A       +  +  ME L+  LN       + +++  S    N V+D+L E    +
Sbjct: 648 LKNEALDLRSIQQNFVPPMESLLEKLNS-----NVKTLDESSNDLQNAVKDVLAEVQAAQ 702

Query: 166 KQLNEKLLKL 175
             LN    ++
Sbjct: 703 GFLNNNASEI 712

The prominins are an emerging family of proteins that among the multispan membrane proteins display a novel topology. Mouse prominin and human prominin (mouse)-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration. Length = 807

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	239
PRK15022	167	ferritin-like protein; Provisional	100.0
PRK10304	165	ferritin; Provisional	100.0
cd00904	160	Ferritin Ferritin iron storage proteins. Ferritins	100.0
COG1528	167	Ftn Ferritin-like protein [Inorganic ion transport	100.0
KOG2332|consensus	178		100.0
cd01056	161	Euk_Ferritin eukaryotic ferritins. Eukaryotic Ferr	100.0
cd01055	156	Nonheme_Ferritin nonheme-containing ferritins. Non	100.0
PRK10635	158	bacterioferritin; Provisional	99.97
TIGR00754	157	bfr bacterioferritin. Bacterioferritin is a homomu	99.96
cd00907	153	Bacterioferritin Bacterioferritin, ferritin-like d	99.94
PF00210	142	Ferritin: Ferritin-like domain; InterPro: IPR00833	99.94
COG2193	157	Bfr Bacterioferritin (cytochrome b1) [Inorganic io	99.92
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	99.91
cd01052	148	DPSL DPS-like protein, ferritin-like diiron-bindin	99.9
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	99.84
PRK13456	186	DNA protection protein DPS; Provisional	99.77
cd01043	139	DPS DPS protein, ferritin-like diiron-binding doma	99.47
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	99.35
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	99.34
cd01051	156	Mn_catalase Manganese catalase, ferritin-like diir	99.06
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	99.05
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	98.93
COG2406	172	Protein distantly related to bacterial ferritins [	98.85
PRK09448	162	DNA starvation/stationary phase protection protein	98.84
COG0783	156	Dps DNA-binding ferritin-like protein (oxidative d	98.53
COG1633	176	Uncharacterized conserved protein [Function unknow	98.5
cd01044	125	Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin	98.5
PRK12775	1006	putative trifunctional 2-polyprenylphenol hydroxyl	98.25
COG1592	166	Rubrerythrin [Energy production and conversion]	98.05
PF13668	137	Ferritin_2: Ferritin-like domain	97.96
cd01042	165	DMQH Demethoxyubiquinone hydroxylase, ferritin-lik	97.46
TIGR02284	139	conserved hypothetical protein. Members of this pr	97.12
cd01048	135	Ferritin_like_AB2 Uncharacterized family of ferrit	97.11
PF03405	330	FA_desaturase_2: Fatty acid desaturase; InterPro:	96.71
cd01050	297	Acyl_ACP_Desat Acyl ACP desaturase, ferritin-like	96.54
PF09537	111	DUF2383: Domain of unknown function (DUF2383); Int	96.5
PF03232	172	COQ7: Ubiquinone biosynthesis protein COQ7; InterP	96.5
PF05974	159	DUF892: Domain of unknown function (DUF892); Inter	95.86
PF04305	253	DUF455: Protein of unknown function (DUF455); Inte	95.03
PF05067	283	Mn_catalase: Manganese containing catalase; InterP	94.31
COG1633	176	Uncharacterized conserved protein [Function unknow	93.88
PF12902	227	Ferritin-like: Ferritin-like; PDB: 3HL1_A.	91.99
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	91.93
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	91.46
cd07910	180	MiaE MiaE tRNA-modifying nonheme diiron monooxygen	91.39
COG3546	277	Mn-containing catalase [Inorganic ion transport an	90.55
COG2941	204	CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzym	90.53
cd07909	147	YciF YciF bacterial stress response protein, ferri	87.78
cd01052	148	DPSL DPS-like protein, ferritin-like diiron-bindin	87.13
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	86.89
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	86.82
COG2833	268	Uncharacterized protein conserved in bacteria [Fun	86.13
cd00907	153	Bacterioferritin Bacterioferritin, ferritin-like d	86.13
PF00210	142	Ferritin: Ferritin-like domain; InterPro: IPR00833	85.82
PLN00179	390	acyl- [acyl-carrier protein] desaturase	85.71
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	83.44
COG3685	167	Uncharacterized protein conserved in bacteria [Fun	82.53
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	81.59
PF13668	137	Ferritin_2: Ferritin-like domain	81.39
PF09537	111	DUF2383: Domain of unknown function (DUF2383); Int	81.28
PRK12775	1006	putative trifunctional 2-polyprenylphenol hydroxyl	81.25

>PRK15022 ferritin-like protein; Provisional

Probab=100.00  E-value=2.5e-45  Score=308.01  Aligned_cols=156  Identities=22%  Similarity=0.360  Sum_probs=150.7

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++++++||+|||.|++|||+|++||+||+  +.+|+|||+||+.+|.|||+||++|++||++|||+|.+.+|++|..
T Consensus         1 m~~~~~~~~LN~QIn~E~~aSy~YLsMa~~~~--~~~L~GfA~ff~~qa~EEreHA~k~~~yl~~rGg~v~l~~I~~P~~   78 (167)
T PRK15022          1 MATAGMLLKLNSQMNLEFYASNLYLHLSEWCS--EQSLNGTATFLRAQAQSNVTQMMRMFNFMKSAGATPIVKAIDVPGE   78 (167)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHcCCceeeCCCCCCcc
Confidence            46789999999999999999999999999998  6799999999999999999999999999999999999999999984


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       +|+|++++|+.+|++|+.||+.|++|+++|.+++|++|++||+| ||.||++++..+.+++++++++|     +|+||+
T Consensus        79 -~~~s~~e~fe~al~hEk~vt~~I~~L~~~A~~~~D~~t~~FL~w-fv~EQ~eEe~~~~~ild~l~~~~~~g~g~~~~D~  156 (167)
T PRK15022         79 -KLNSLEELFQKTLEEYEQRSSTLAQLADEAKALNDDSTLNFLRD-LEKEQQHDGLLLQTILDEVRSAKLAGLCPVQTDQ  156 (167)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcchhHhhH
Confidence             99999999999999999999999999999999999999999999 99999999999999999999886     899999


Q ss_pred             HhcCC
Q psy10513        224 DLMSG  228 (239)
Q Consensus       224 ~L~~~  228 (239)
                      +++..
T Consensus       157 ~~~~~  161 (167)
T PRK15022        157 HLLNV  161 (167)
T ss_pred             HHHHh
Confidence            99875

>PRK10304 ferritin; Provisional

Probab=100.00  E-value=3.2e-43  Score=295.07  Aligned_cols=156  Identities=27%  Similarity=0.504  Sum_probs=150.6

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++|+++||+|||.||+|+++|++||.||+  ++||+|||+||+.+|.|||+||++|++||++|||.|.+++|+.|..
T Consensus         1 ~~~~~i~~~Ln~qin~El~As~~Yl~ma~~~~--~~gl~g~A~~f~~qs~EE~~HA~kl~~~i~~rgg~~~~~~i~~p~~   78 (165)
T PRK10304          1 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA   78 (165)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCCCCcc
Confidence            36889999999999999999999999999999  7899999999999999999999999999999999999999998875


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       +|.|+.++|+.+|++|+.|+..|++|+++|.+++|++|++||+| ||.|||++++.+++++++++++|     +|+||+
T Consensus        79 -~~~s~~e~~~~~l~~E~~vt~~i~~l~~~A~~~~D~~t~~fl~~-fl~EQveEe~~~~~l~~~l~~~~~~g~~~y~~D~  156 (165)
T PRK10304         79 -EYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQW-YVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDK  156 (165)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHhH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999996     899999


Q ss_pred             HhcCC
Q psy10513        224 DLMSG  228 (239)
Q Consensus       224 ~L~~~  228 (239)
                      +++..
T Consensus       157 ~l~~~  161 (165)
T PRK10304        157 ELSTL  161 (165)
T ss_pred             HHHHh
Confidence            99753

>cd00904 Ferritin Ferritin iron storage proteins

Probab=100.00  E-value=2.3e-43  Score=293.81  Aligned_cols=153  Identities=44%  Similarity=0.716  Sum_probs=148.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++|+++||+||+.||.|+++|++||+||++++|||+|||+||+.+|+|||+||++|++||++|||.|.++.|++|...+
T Consensus         1 ~~~~~~~Ln~qi~~El~as~~Yl~ma~~~~~~~~~l~g~a~~f~~~s~eE~~HA~~l~~yi~~rgg~~~l~~i~~~~~~~   80 (160)
T cd00904           1 SEKVEAAVNRQLNLELYASYTYLSMATYFDRDDVALKGVAHFFKEQAQEEREHAEKFYKYQNERGGRVELQDIEKPPSDE   80 (160)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCcCCCCcccc
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999998658


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-------HHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-------LYLVDR  223 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-------~ylfDk  223 (239)
                      |++++++|+.+|++|+.|+..|++|+++|.+++|++|++||+|+||.||+++++++.++|++|+++|       +|+||+
T Consensus        81 ~~~~~e~~e~al~~Ek~v~~~i~~l~~~A~~~~D~~t~~fl~~~fi~eQ~ee~~~~~~~l~~l~~~~~~~~~~~~~~~D~  160 (160)
T cd00904          81 WGGTLDAMEAALKLEKFVNQALLDLHELASEEKDPHLCDFLESHFLDEQVKEIKQVGDILTNLERLNGQQAGSGEYLFDR  160 (160)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHhhchhhHHHHHHHHHHHHHHHHHHhhcCCCCCceeeeeCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999885       698885

Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary rol

>COG1528 Ftn Ferritin-like protein [Inorganic ion transport and metabolism]

Probab=100.00  E-value=6e-43  Score=291.17  Aligned_cols=158  Identities=30%  Similarity=0.546  Sum_probs=153.5

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++++++||+|||.|++|+++|++||+||+  +.+|+|+|+||+.||.||+.||++|++|++.||++|.+..|.+|..
T Consensus         1 mls~~~~~~LN~Q~N~E~yas~lYl~maa~~~--~~~l~G~A~f~~~qa~EE~~H~~k~~~yl~~~g~~~~l~~I~~P~~   78 (167)
T COG1528           1 MLSEKMIELLNEQMNLEFYASNLYLQMAAWCS--SESLPGFAKFLRAQAQEELTHAMKLFNYLNERGARPELKAIEAPPN   78 (167)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCChhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCcCCCcc
Confidence            36789999999999999999999999999999  7899999999999999999999999999999999999999999997


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       +|+++.++|+.+|++|+.||..|++|+++|.+++|+.|.+||+| ||.||+|++..++++|++++++|     +|++|+
T Consensus        79 -~~~s~~e~f~~tlehEq~vt~~I~~L~~~a~~~kD~~T~nFLqW-fv~EQ~eEe~l~~~I~d~~~~ag~~~~~l~~~D~  156 (167)
T COG1528          79 -KFSSLKELFEKTLEHEQKVTSSINELAEVAREEKDYATFNFLQW-FVAEQVEEEKLFKTILDKLELAGNDGEGLYLIDK  156 (167)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCccchhhhHH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999998     999999


Q ss_pred             HhcCCCC
Q psy10513        224 DLMSGKF  230 (239)
Q Consensus       224 ~L~~~k~  230 (239)
                      +|++...
T Consensus       157 ~L~~~~~  163 (167)
T COG1528         157 ELKNRAS  163 (167)
T ss_pred             HHHhhcc
Confidence            9998754

>KOG2332|consensus

Probab=100.00  E-value=1.4e-43  Score=298.22  Aligned_cols=167  Identities=43%  Similarity=0.725  Sum_probs=162.5

Q ss_pred             CccccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q psy10513         61 KTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL  140 (239)
Q Consensus        61 ~~~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l  140 (239)
                      .+.+.+||+|+.+++.++|.|||.|+++||+|++||+||+|++++++||++||..+|.|||+||++|++|+++|||+|.+
T Consensus         4 ~~~~~~r~~~~~~~~~~in~~in~el~~sy~Ylsma~yf~rd~v~l~g~~~ff~~~s~eereha~klm~~~n~rgg~i~l   83 (178)
T KOG2332|consen    4 KMSSEARQNYHDEAEAAINSQINLELNASYVYLSMAAYFDRDDVALKGFAKFFLKQSQEEREHAEKLMKTQNMRGGRIEL   83 (178)
T ss_pred             cchHHHhhcchhhccchhhhhccchhccchhhhhhhhccCccccchhhhhhhhhhhhhhhhhhHHHHHHHHHHhCCcccc
Confidence            45578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH---
Q psy10513        141 TSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ---  217 (239)
Q Consensus       141 ~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g---  217 (239)
                      ++|..|..++|++.+++|+.||.+|+.|+++|.+|+.+|.+.+|+++++||+.+||.|||+.|++|.+++++++++|   
T Consensus        84 ~~i~~P~~~ew~~~l~ale~al~LEk~vn~sLl~Lh~lA~~knD~hL~dflE~~fL~eQVksIkeL~~~~~~l~k~~~~~  163 (178)
T KOG2332|consen   84 QDIKKPELDEWGKGLEALEAALHLEKNVNQSLLELHSLATKKNDPHLCDFLESHFLNEQVKSIKELSDYLANLKKMGAPD  163 (178)
T ss_pred             ccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHhhhHHHHHHHHHHHHHHHhHHhccCCC
Confidence            99999988999999999999999999999999999999999999999999999999999999999999999999997   


Q ss_pred             ----HHHHHHHhcC
Q psy10513        218 ----LYLVDRDLMS  227 (239)
Q Consensus       218 ----~ylfDk~L~~  227 (239)
                          .|+||+.+.+
T Consensus       164 ~g~~~~lfd~~~~~  177 (178)
T KOG2332|consen  164 GGLGEYLFDKYLLS  177 (178)
T ss_pred             Cchhhhhhhhhhcc
Confidence                8999999865

>cd01056 Euk_Ferritin eukaryotic ferritins

Probab=100.00  E-value=2.5e-40  Score=275.27  Aligned_cols=153  Identities=48%  Similarity=0.797  Sum_probs=146.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++|+++||+||+.||.|+++|++||.||++.++|++|||+||+.+|+|||+||++|++||+.|||.|++++|++|....
T Consensus         1 ~~~i~~~Ln~~i~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~a~eE~~HA~~l~~~i~~rgg~~~~~~i~~~~~~~   80 (161)
T cd01056           1 HEECEAALNKQINLELNASYVYLSMAAYFDRDDVALPGFAKFFRKLSDEEREHAEKLIKYQNKRGGRVVLQDIKKPEKDE   80 (161)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCCcc
Confidence            46899999999999999999999999999966669999999999999999999999999999999999999999997337


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-------HHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-------LYLVDR  223 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-------~ylfDk  223 (239)
                      |.++.++|+.||++|+.|+..|++|+.+|.+++|++|.+||+|.||.||++++++++++|++|++++       +|+||+
T Consensus        81 ~~~~~e~l~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~~fl~eQ~e~~~~~~~~l~~l~~~~~~~~~~~~yl~D~  160 (161)
T cd01056          81 WGSGLEALELALDLEKLVNQSLLDLHKLASEHNDPHLADFLESEFLEEQVESIKKLAGYITNLKRVGKPQSGLGEYLFDK  160 (161)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCceeeeccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999886       699986

Eukaryotic Ferritin (Euk_Ferritin) domain. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged r

>cd01055 Nonheme_Ferritin nonheme-containing ferritins

Probab=100.00  E-value=2.9e-36  Score=247.95  Aligned_cols=151  Identities=34%  Similarity=0.566  Sum_probs=145.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++|+++||++|+.|+.|+++|++||.||+  .++++||++||+..|.+||+||.+|++||++|||.|.++.|++|.. +
T Consensus         1 ~~~~~~~Ln~~~~~El~A~~~Yl~~a~~~~--~~~~~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~~~~~~~~~~-~   77 (156)
T cd01055           1 SEKLEKALNEQINLELYSSYLYLAMAAWFD--SKGLDGFANFFRVQAQEEREHAMKFFDYLNDRGGRVELPAIEAPPS-E   77 (156)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeeCCCCCCCCc-c
Confidence            478999999999999999999999999999  5699999999999999999999999999999999999999999875 8


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHh
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDL  225 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk~L  225 (239)
                      |.++.++|+.+|++|+.++..|.+++++|..++|+.+++||+| ||.+|+++++++++++++++++|     +|+||+.|
T Consensus        78 ~~~~~~~l~~al~~E~~~~~~~~~l~~~A~~~~D~~~~~~l~~-~l~~q~e~~~~~~~~l~~l~~~g~~~~~~~~~d~~l  156 (156)
T cd01055          78 FESLLEVFEAALEHEQKVTESINNLVDLALEEKDYATFNFLQW-FVKEQVEEEALARDILDKLKLAGDDGGGLYMLDKEL  156 (156)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcchHHHhcccC
Confidence            9999999999999999999999999999999999999999998 99999999999999999999997     89999875

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.

>PRK10635 bacterioferritin; Provisional

Probab=99.97  E-value=5.4e-30  Score=213.64  Aligned_cols=148  Identities=20%  Similarity=0.218  Sum_probs=142.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||++++.||.|+++|+.+|.+|+  +||+++++.+|+.+|.||+.||++|++||+.+||.|+++++.+|..  
T Consensus         4 ~~~vi~~LN~~L~~El~Ai~QY~~ha~~~~--~~G~~~la~~~~~ea~eEm~HA~~l~eRIl~LgG~P~~~~~~~~~~--   79 (158)
T PRK10635          4 DVKIINYLNKLLGNELVAINQYFLHARMFK--NWGLMRLNDVEYHESIDEMKHADKYIERILFLEGIPNLQDLGKLNI--   79 (158)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCC--
Confidence            678999999999999999999999999999  8999999999999999999999999999999999999999988875  


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVDR  223 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfDk  223 (239)
                      ..++.++|+.+|++|+.++..|++++.+|.+.+|+.+++||+| ||.++.+|++||++++..++++|  .|+--+
T Consensus        80 g~~v~eml~~dl~~E~~ai~~y~e~i~~a~~~~D~~s~~ll~~-iL~dEe~H~~~le~~l~~i~~~G~~~yl~~~  153 (158)
T PRK10635         80 GEDVEEMLRSDLRLELEGAKDLREAIAYADSVHDYVSRDMMIE-ILADEEGHIDWLETELDLIGKLGLQNYLQSQ  153 (158)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            4799999999999999999999999999999999999999999 99999999999999999999999  786543

>TIGR00754 bfr bacterioferritin

Probab=99.96  E-value=2.2e-28  Score=202.35  Aligned_cols=146  Identities=23%  Similarity=0.293  Sum_probs=140.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||++|+.|+.|+++|+.|+.|+.  +|+++|++.||+.+|.||++||++|++||+.+||.|.+..++.|.. .
T Consensus         4 ~~~~~~~LN~~l~~E~~a~~~Y~~~~~~~~--~~~~~g~a~~~~~~a~EE~~Ha~~laeri~~lGg~p~~~~i~~~~~-~   80 (157)
T TIGR00754         4 DPDVIQHLNKQLTNELTAINQYFLHARMQK--NWGLKELADHEYHESIDEMKHADEIIERILFLEGLPNLQDLGKLRI-G   80 (157)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcCCCCCC-C
Confidence            578999999999999999999999999996  8999999999999999999999999999999999999999998875 3


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                       .++.++|+.++++|+.++..|++++++|.+.+|+.|.+||+| |+.++.+++.+|+.+|..+.++|  .|+.
T Consensus        81 -~~~~e~l~~~l~~E~~~~~~~~e~i~~A~~~~D~~t~~ll~~-~i~eee~h~~~l~~~l~~~~~~g~~~y~~  151 (157)
T TIGR00754        81 -ETVREMLEADLALELDVLNRLKEAIAYAEEVRDYVSRDLLEE-ILEDEEEHIDWLETQLELIDKLGLENYLQ  151 (157)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence             789999999999999999999999999999999999999999 99999999999999999999999  6764

Bacterioferritin is a homomultimer most species. In Neisseria gonorrhoeae, Synechocystis PCC6803, Magnetospirillum magnetotacticum, and Pseudomonas aeruginosa, two types of subunit are found in a heteromultimeric complex, with each species having one member of each type. At present, both types of subunit are including in this single model.

>cd00907 Bacterioferritin Bacterioferritin, ferritin-like diiron-binding domain

Probab=99.94  E-value=1.4e-25  Score=183.30  Aligned_cols=146  Identities=22%  Similarity=0.269  Sum_probs=138.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      ++++++.||.+|+.|+.++++|+.++.+|+  ++++++++.||+.+|.+|+.||+.|.+|++.+||.|.+..++.|..  
T Consensus         3 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~~~~~f~~~a~ee~~Ha~~lae~i~~lGg~p~~~~~~~~~~--   78 (153)
T cd00907           3 DPKVIEALNKALTGELTAINQYFLHARMLE--DWGLEKLAERFRKESIEEMKHADKLIERILFLEGLPNLQRLGKLRI--   78 (153)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCCCCc--
Confidence            578999999999999999999999999998  7899999999999999999999999999999999999988887764  


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      ..++.++|+.+++.|+.++..|++++++|.+.+|+.|.+||++ |+.++.+++.+++.++..++++|  .|+-
T Consensus        79 ~~~~~~~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~l~~-~~~~e~~h~~~l~~~l~~~~~~g~~~~~~  150 (153)
T cd00907          79 GEDVPEMLENDLALEYEAIAALNEAIALCEEVGDYVSRDLLEE-ILEDEEEHIDWLETQLDLIDKMGLQNYLQ  150 (153)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            2478999999999999999999999999999999999999999 99999999999999999999999  7764

Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) best

>PF00210 Ferritin: Ferritin-like domain; InterPro: IPR008331 Ferritin is one of the major non-haem iron storage proteins in animals, plants, and microorganisms []

Probab=99.94  E-value=5.8e-26  Score=180.49  Aligned_cols=137  Identities=30%  Similarity=0.464  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC-----CCCCCcc
Q psy10513         75 IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS-----IEAPSKQ  149 (239)
Q Consensus        75 e~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~-----I~~p~~~  149 (239)
                      +++||++++.|+.++++|+.++.+|+  +.+++|+++||+.+|+++++||+++++|++.|||.|....     ++.|.. 
T Consensus         1 i~~Ln~~l~~e~~~~~~y~~~~~~~~--~~~~~~l~~~~~~~a~e~~~h~~~l~e~i~~lgg~p~~~~~~~~~~~~~~~-   77 (142)
T PF00210_consen    1 IEALNEQLALELQASQQYLNMHWNFD--GPNFPGLAKFFQDQAEEEREHADELAERILMLGGKPSGSPVEIPEIPKPPE-   77 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-SSTSHHHHHHHHSSSS-
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCchhhHHHhHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHhhhhhcccc-
Confidence            57999999999999999999999999  8899999999999999999999999999999999665444     556653 


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        150 EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       150 ~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                       |.++.++|+.+++.|+.+...++++++.|.+.+|+.|.+|+++ |+.+|.+++.+|+++|++++||
T Consensus        78 -~~~~~~~l~~~l~~e~~~~~~~~~l~~~a~~~~D~~t~~~~~~-~l~~~~~~~~~l~~~l~~l~~~  142 (142)
T PF00210_consen   78 -WTDPREALEAALEDEKEIIEEYRELIKLAEKEGDPETADFLDE-FLEEEEKHIWMLQAHLTNLKRM  142 (142)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcC
Confidence             8899999999999999999999999999999999999999988 9999999999999999999986

It consists of a mineral core of hydrated ferric oxide, and a multi-subunit protein shell that encloses the former and assures its solubility in an aqueous environment. In animals the protein is mainly cytoplasmic and there are generally two or more genes that encode closely related subunits - in mammals there are two subunits which are known as H(eavy) and L(ight). In plants ferritin is found in the chloroplast []. This entry represents the main structural domain of ferritin. The domain is also found in other ferritin-like proteins such as members of the DNA protection during starvation (DPS) family and bacterioferritins.; GO: 0008199 ferric iron binding, 0006879 cellular iron ion homeostasis; PDB: 1N1Q_C 4DYU_E 2YJJ_D 2YJK_B 2VXX_B 3FVB_A 2WLU_A 2XGW_A 2WLA_A 1Z4A_D ....

>COG2193 Bfr Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]

Probab=99.92  E-value=7.4e-24  Score=173.17  Aligned_cols=145  Identities=22%  Similarity=0.248  Sum_probs=139.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccc
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEW  151 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~  151 (239)
                      +.|+..||+++..||.|.++|+.+|..+.  +||+..++++|+++|.+|+.||++++++|++++|.|+++.+.+-..  .
T Consensus         5 ~~Vi~~LN~~L~~EL~ainQYflHsrM~~--~WG~~~L~~~~~~esi~Em~HAd~lieRIlfLeG~Pnlq~~~~l~i--G   80 (157)
T COG2193           5 PKVIRLLNEALGLELAAINQYFLHSRMYK--NWGLTKLAAHEYHESIEEMKHADQLIERILFLEGLPNLQDLGKLRI--G   80 (157)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccccc--C
Confidence            68999999999999999999999999999  9999999999999999999999999999999999999999998654  7


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      .++.++|+..|++|+.+...|.+.+..|.+..||++++.|.. .|.++.+|+.||+++|..+.++|  .|+-
T Consensus        81 ~tv~E~L~~DL~~E~~a~~~lk~~i~~~e~~~Dyvsrdl~~~-iL~deEEHid~LetqL~li~~iG~~nY~q  151 (157)
T COG2193          81 ETVKEMLEADLALEYEARDALKEAIAYCEEVQDYVSRDLLEE-ILADEEEHIDWLETQLDLIAKIGEENYLQ  151 (157)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH-HHcchHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            799999999999999999999999999999999999999998 99999999999999999999999  6754

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=99.91  E-value=2.7e-23  Score=167.74  Aligned_cols=131  Identities=15%  Similarity=0.150  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccccc
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNT  153 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~s  153 (239)
                      ..+.||..+..|+.++++|++||.|+.  .+|++|+|+||+.+|.+|+.||.+|++|++.+||.|.     .|.. .|++
T Consensus         2 t~~~L~~a~~~E~~a~~~Y~~~a~~a~--~~g~~~~a~~f~~~a~eE~~HA~~~~~~l~~l~g~~~-----~~~~-~~~~   73 (134)
T cd01041           2 TEKNLLAAFAGESQARNRYTYFAEKAR--KEGYEQIARLFRATAENEKEHAKGHFKLLKGLGGGDT-----GPPI-GIGD   73 (134)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----CCCC-Ccch
Confidence            357899999999999999999999999  7799999999999999999999999999999999998     4443 7999


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        154 VEDLLTEALHMEKQ-LNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       154 ~~eale~AL~~Ek~-vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      +.+.|+.++++|.. ++..|.+++++|.+++|+.+.+|+++ ++.++.+|.+++...|.+|
T Consensus        74 ~~~~l~~~~~~E~~e~~~~y~~~~~~A~~e~d~~~~~~f~~-i~~~E~~H~~~l~~~l~~l  133 (134)
T cd01041          74 TLENLKAAIAGETYEYTEMYPEFAEVAEEEGFKEAARSFEA-IAEAEKVHAERYKKALENL  133 (134)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHhhcc
Confidence            99999999999995 88999999999999999999999998 9999999999999998875

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain

Probab=99.90  E-value=2.4e-22  Score=163.32  Aligned_cols=135  Identities=20%  Similarity=0.224  Sum_probs=123.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC-------
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI-------  143 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I-------  143 (239)
                      .+++++.||.+++.|+.++++|+.++.++.  ++++.++++||..++.+|++||+.|++|++.+||.|.+...       
T Consensus         4 ~~~~~~~Ln~~la~e~~~~~~y~~~~~~~~--g~~f~~l~~~~~~~~~ee~~Had~laEri~~lGg~p~~~~~~~~~~~~   81 (148)
T cd01052           4 VDELIELLNKAFADEWLAYYYYTILAKHVK--GPEGEGIKEELEEAAEEELNHAELLAERIYELGGTPPRDPKDWYEISG   81 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHhc
Confidence            467899999999999999999999999999  78999999999999999999999999999999999997553       


Q ss_pred             ---CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        144 ---EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       144 ---~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                         +.+. ..+.++.++|+.+++.|+.++..|++++++|.. +|+.|++||+| ||.+|++|+.++.++|
T Consensus        82 ~~~~~~~-~~~~~~~~~l~~~~~~e~~~i~~~~~~~~~a~~-~D~~t~~ll~~-~l~de~~h~~~~~~~~  148 (148)
T cd01052          82 CKCGYLP-PDPPDVKGILKVNLKAERCAIKVYKELCDMTHG-KDPVTYDLALA-ILNEEIEHEEDLEELL  148 (148)
T ss_pred             ccccCCC-CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHH-HHHHHHHHHHHHHhhC
Confidence               2222 257789999999999999999999999999975 99999999999 9999999999999874

DPSL (DPS-like). DPSL is a phylogenetically distinct class within the ferritin-like superfamily, and similar in many ways to the DPS (DNA Protecting protein under Starved conditions) proteins. Like DPS, these proteins are expressed in response to oxidative stress, form dodecameric cage-like particles, preferentially utilize hydrogen peroxide in the controlled oxidation of iron, and possess a short N-terminal extension implicated in stabilizing cellular DNA. This domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. These proteins are distantly related to bacterial ferritins which assemble 24 monomers, each of which have a four-helix bundle with a fifth shorter helix at the C terminus and a diiron (ferroxidase) center. Ferritins contain a center where oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=99.84  E-value=1.6e-19  Score=144.41  Aligned_cols=121  Identities=20%  Similarity=0.209  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccccc
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNT  153 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~s  153 (239)
                      +++.||.+++.|+.++++|+.||.|++  ..|++++|+||+.+|.+|+.||.++++++   |+      |+       +|
T Consensus         2 ~~~~L~~a~~~E~~a~~~Y~~~a~~a~--~eG~~~~A~~f~~~a~eE~~HA~~~~~~l---~~------i~-------~~   63 (123)
T cd01046           2 LEEDLEANFKGETTEVGMYLAMARVAQ--REGYPEVAEELKRIAMEEAEHAARFAELL---GK------VS-------ED   63 (123)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHH---hc------Cc-------cc
Confidence            678999999999999999999999999  77999999999999999999999999976   22      11       68


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        154 VEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       154 ~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      +.++|+.++++|+.++..|.+++++|.+++|+.+.+||.+ ++..+..|.+++...|..+
T Consensus        64 ~~~~le~a~~~E~~~~~~~~~~~~~A~~egd~~~~~~~~~-~~~~E~~H~~~~~~~l~~~  122 (123)
T cd01046          64 TKENLEMMLEGEAGANEGKKDAATEAKAEGLDEAHDFFHE-AAKDEARHGKMLKGLLERY  122 (123)
T ss_pred             HHHHHHHHHHhHHHHHHhHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999999 9999999999999988764

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>PRK13456 DNA protection protein DPS; Provisional

Probab=99.77  E-value=2.3e-17  Score=140.27  Aligned_cols=135  Identities=17%  Similarity=0.237  Sum_probs=124.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC------
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIE------  144 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~------  144 (239)
                      -++++++||+.++.|+.|.|+|+.+++...  ++...+++.||.+.+.||+.||+.|.++|.++||.|.+.+-+      
T Consensus        18 ~~~li~lLn~AlA~E~~a~~~Y~~~a~~~~--G~~~e~V~e~le~a~~EEl~HA~~lAeRI~qLGG~P~~~p~~~~~ls~   95 (186)
T PRK13456         18 VDKLVELLVKNAAAEFTTYYYYTILRAHLI--GLEGEGLKEIAEDARLEDRNHFEALVPRIYELGGKLPRDIREFHDISA   95 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHhhhhc
Confidence            468899999999999999999999999999  788999999999999999999999999999999999877663      


Q ss_pred             -----CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        145 -----APSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       145 -----~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                           .|.  +++++.++++.+|..|+.....|+++++.+. .+|+.|.+.+.. +|.++++|.++|.++|.
T Consensus        96 ~~~~~~p~--d~tdv~~mL~~~L~AEr~AI~~Y~eii~~~~-~kDp~T~~l~~~-IL~dE~eH~~dl~~lL~  163 (186)
T PRK13456         96 CPDAYLPE--NPTDPKEILKVLLEAERCAIRTYTEICDMTA-GKDPRTYDLALA-ILQEEIEHEAWFSELLG  163 (186)
T ss_pred             CccccCCC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCccHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence                 122  4778999999999999999999999999997 689999999998 99999999999999875

>cd01043 DPS DPS protein, ferritin-like diiron-binding domain

Probab=99.47  E-value=1.9e-12  Score=104.57  Aligned_cols=129  Identities=18%  Similarity=0.190  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC--------CCCCCc
Q psy10513         77 KINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS--------IEAPSK  148 (239)
Q Consensus        77 ~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~--------I~~p~~  148 (239)
                      .||..++.++..+..|..+.-+..  +.++..+..+|.+.+.++++|+..+++++...||.|..+.        ++.+..
T Consensus         2 ~Ln~~lA~~~~~~~~~~~~HW~v~--G~~f~~lh~~l~e~~~~~~~~~D~lAERi~~lgg~P~~~~~~~~~~s~l~~~~~   79 (139)
T cd01043           2 ALNQLLADLYVLYLKLKNYHWNVK--GPNFFALHELFEELYDELREAIDEIAERIRALGGKPLGTLKEYAELSTIKEEPA   79 (139)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcCcc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCC
Confidence            689999999999999998766666  8899999999999999999999999999999999998763        655542


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                       .+.++.++++..++.|..+...++++++.|.+.+|+.|.++|+. ++.+..+++-+|+.+
T Consensus        80 -~~~~~~~~l~~~~~~~~~~i~~~~~~i~~a~~~~D~~t~~ll~~-il~~~ek~~w~l~a~  138 (139)
T cd01043          80 -GVLSAKEMVAELLEDYETLIEELREAIELADEAGDPATADLLTE-IIRELEKQAWMLRAH  138 (139)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHhc
Confidence             46679999999999999999999999999999999999999998 999998888887754

DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) disp

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=99.35  E-value=6.3e-11  Score=97.47  Aligned_cols=133  Identities=18%  Similarity=0.181  Sum_probs=113.1

Q ss_pred             hHHHHHHHHHHHH---HHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCC-
Q psy10513         71 HEDCIDKINTQIN---DEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP-  146 (239)
Q Consensus        71 s~eve~~LN~qIn---~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p-  146 (239)
                      +++.-..|++++.   .|+.|+.+|+..+....  . +.+.+++.|...|.+|+.|+..|.+++..+||.|.+...... 
T Consensus        11 ~~~~~~~~~~~~~g~~~E~~ai~~Y~y~~~~~~--~-~~~~~k~~f~~lA~eE~~H~~~l~~~i~~lgg~p~~~~~~~~~   87 (154)
T cd07908          11 NPRYAELLLDDYAGTNSELTAISQYIYQHLISE--E-KYPEIAETFLGIAIVEMHHLEILGQLIVLLGGDPRYRSSSSDK   87 (154)
T ss_pred             ChHHHHHHHHHhCCcchHHHHHHHHHHHHHHcc--C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhcccc
Confidence            5667788888888   99999999999998876  3 689999999999999999999999999999998875432110 


Q ss_pred             -------CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        147 -------SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       147 -------~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                             ......++.++++.++..|+.....|.++...   ..|..++.+|.. ++.++.+|+++|..+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~L~~~~~~E~~ai~~Y~~~~~~---~~d~~~r~ll~~-I~~eE~~H~~~L~~~l  154 (154)
T cd07908          88 FTYWTGKYVNYGESIKEMLKLDIASEKAAIAKYKRQAET---IKDPYIRALLNR-IILDEKLHIKILEELL  154 (154)
T ss_pred             CCcCCccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH---cCCHHHHHHHHH-HHHHHHHHHHHHHhhC
Confidence                   01134578999999999999999999999885   489999999998 9999999999998764

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=99.34  E-value=1.1e-10  Score=88.15  Aligned_cols=123  Identities=20%  Similarity=0.195  Sum_probs=107.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC-----CCCCCcccc
Q psy10513         77 KINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS-----IEAPSKQEW  151 (239)
Q Consensus        77 ~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~-----I~~p~~~~~  151 (239)
                      +||..+..|+.+...|..++..+.     .+++..+|...+.+|+.|+..|.+++..+|+.+....     ...+. ...
T Consensus         2 ~L~~~~~~E~~a~~~y~~~~~~~~-----~~~~~~~~~~~a~~E~~H~~~l~~~~~~~g~~~~~~~~~~~~~~~~~-~~~   75 (130)
T cd00657           2 LLNDALAGEYAAIIAYGQLAARAP-----DPDLKDELLEIADEERRHADALAERLRELGGTPPLPPAHLLAAYALP-KTS   75 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhcccC-CCc
Confidence            689999999999999999999886     6889999999999999999999999999999887553     11122 256


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                      .+..+++..++..|......+..+.+.+.   |+.+.+++.+ ++.++..|...+..+
T Consensus        76 ~~~~~~l~~~~~~E~~~~~~y~~~~~~~~---d~~~~~~~~~-~~~~E~~H~~~~~~~  129 (130)
T cd00657          76 DDPAEALRAALEVEARAIAAYRELIEQAD---DPELRRLLER-ILADEQRHAAWFRKL  129 (130)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHhcC---ChHHHHHHHH-HHHHHHHHHHHHHhh
Confidence            78899999999999999999999988774   9999999999 999999999988765

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>cd01051 Mn_catalase Manganese catalase, ferritin-like diiron-binding domain

Probab=99.06  E-value=1e-08  Score=85.58  Aligned_cols=134  Identities=13%  Similarity=0.104  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         72 EDCIDKINTQI---NDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        72 ~eve~~LN~qI---n~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +..-.+|.+++   +-|+.|+.+|+..++.+.    ..+.+...|...|.||+.|++.|.+.+.++||.+.-.+-..+-.
T Consensus        19 p~~A~~l~~~~gG~~gEl~ai~qYl~q~~~~~----~~~~~~d~l~~ia~eEm~H~e~la~~I~~Lg~~~~g~pw~~~yv   94 (156)
T cd01051          19 PRFAKLLQEQLGGAFGELSAAMQYLFQSFNFR----EDPKYRDLLLDIGTEELSHLEMVATLIAMLLKDSQGVPWTAAYI   94 (156)
T ss_pred             HHHHHHHHHHhCCccHHHHHHHHHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCCccc
Confidence            33444555554   369999999999999994    36899999999999999999999999999998443222111111


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      ..-+++...|..+++.|+.....+.+++..+   .|+.+.+.|.+ ++.+++.|...++..|..|
T Consensus        95 ~~~~d~~~~L~~ni~aE~~Ai~~Y~~l~~~~---~Dp~v~~~l~~-I~~rE~~H~~~f~~~l~~~  155 (156)
T cd01051          95 QSSGNLVADLRSNIAAESRARLTYERLYEMT---DDPGVKDTLSF-LLVREIVHQNAFGKALESL  155 (156)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence            2235799999999999999999999999987   59999999998 9999999999999998875

Manganese (Mn) catalase is a member of a broad superfamily of ferritin-like diiron enzymes. While many diiron enzymes catalyze dioxygen-dependent reactions, manganese catalase performs peroxide-dependent oxidation-reduction. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Manganese catalase, a nonheme type II catalase, contains a binuclear manganese cluster that catalyzes the redox dismutation of hydrogen peroxide, interconverting between dimanganese(II) [(2,2)] and dimanganese(III) [(3,3)] oxidation states during turnover. Mn catalases are found in a broad range of microorganisms in microaerophilic environments, including the mesophilic lactic acid bacteria (e.g., Lactobacillus plantarum) and bacterial and archaeal thermophiles (e.g., Thermus thermophilus and Pyrobaculum caldifontis). L. plantarum and T. thermophilus holoenz

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=99.05  E-value=5.3e-09  Score=82.11  Aligned_cols=125  Identities=22%  Similarity=0.219  Sum_probs=102.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcC--CccccCCCC-------CC
Q psy10513         76 DKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRG--GQLRLTSIE-------AP  146 (239)
Q Consensus        76 ~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RG--G~v~l~~I~-------~p  146 (239)
                      ++||..|..|+.+...|..++..+.     -+++..+|...|.+|+.|+..|...+..+|  +.|.+....       .+
T Consensus         1 ~~l~~a~~~E~~~~~~Y~~~a~~~~-----~~~~~~~~~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (139)
T cd01045           1 EILALAIKMEEEAAEFYLELAEKAK-----DPELKKLFEELAEEEKEHAERLEELYEKLFGEELPELEPEDYKEEVEEEP   75 (139)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcccHHHHHHHHhhhh
Confidence            3689999999999999999999987     238999999999999999999999999987  333322110       00


Q ss_pred             ----CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        147 ----SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       147 ----~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                          ......+..++++.++..|+.....|..+.+.   ..|+.+..++.. ++.++.+|.+.|.++
T Consensus        76 ~~~~~~~~~~~~~~~l~~a~~~E~~~~~~Y~~~~~~---~~d~~~~~~~~~-l~~~E~~H~~~l~~~  138 (139)
T cd01045          76 EFKKALESLMDPLEALRLAIEIEKDAIEFYEELAEK---AEDPEVKKLFEE-LAEEERGHLRLLEEL  138 (139)
T ss_pred             hHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH---cCCHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence                00135678999999999999999988888765   478899999998 999999999999875

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=98.93  E-value=5.5e-08  Score=76.38  Aligned_cols=127  Identities=22%  Similarity=0.265  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC-------CC--
Q psy10513         76 DKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIE-------AP--  146 (239)
Q Consensus        76 ~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~-------~p--  146 (239)
                      +.|+..|..|..+...|..+|..+.  +.+ |.+.+.|...|.+|..|+..|.+.+..+++.+......       .+  
T Consensus         1 e~L~~A~~~E~~~~~~Y~~~a~~~~--~~~-p~~~~~f~~lA~~E~~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   77 (137)
T PF02915_consen    1 EILEMAIKMELEAAKFYRELAEKAK--DEG-PELKELFRRLAEEEQEHAKFLEKLLRKLGPGEEPPFLEEKVEYSFFPKL   77 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH--HTT-HHHHHHHHHHHHHHHHHHHHHHHHHCHCSTTHHTHCHCCCCCHCCCCTC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhh--hcc-cHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcchhhhhhhhhhcchh
Confidence            4688999999999999999999999  446 88999999999999999999999999988755432111       11  


Q ss_pred             CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        147 SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       147 ~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                      ....-.++..+++.++..|+.....+..+..   ...|+....+|.+ ++.++.+|.+.|..+
T Consensus        78 ~~~~~~~~~~~l~~a~~~E~~~~~~Y~~~a~---~~~~~~~~~~~~~-l~~~E~~H~~~l~~l  136 (137)
T PF02915_consen   78 EEETDENLEEALEMAIKEEKDAYEFYAELAR---KAPDPEIRKLFEE-LAKEEKEHEDLLEKL  136 (137)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH---HTTSHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence            0001125889999999999998888887755   4589999999998 999999999998864

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>COG2406 Protein distantly related to bacterial ferritins [General function prediction only]

Probab=98.85  E-value=3.4e-07  Score=75.43  Aligned_cols=134  Identities=18%  Similarity=0.232  Sum_probs=108.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhH-HHHHHHHHHHH-HHHHHHHHHHHHHcCCccc-----cCCCC
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGF-AKFFTHSYKEE-IEHMEHLIAYLNKRGGQLR-----LTSIE  144 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~-A~fF~~~A~EE-~eHA~kLi~yl~~RGG~v~-----l~~I~  144 (239)
                      .++++.|-...+.|+.+.|-|...++...    |+.|- .+.|.+.|.+| +.|++.|..+|...||.+.     |.+|.
T Consensus        16 ~kli~~Llka~AaE~tt~YYYtilr~~l~----Gle~e~~keiae~Ar~E~r~H~e~i~~Ri~elg~~~Prd~~~l~dIS   91 (172)
T COG2406          16 DKLIELLLKAAAAEWTTYYYYTILRYALK----GLEGEGIKEIAEEAREEDRKHFELIAPRIYELGGDLPRDMKKLHDIS   91 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHhhc
Confidence            46778888888999999999999988776    34432 45555555554 6699999999999999872     33443


Q ss_pred             ---C-CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        145 ---A-PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       145 ---~-p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                         . |-..+|.++.+.++.+++.|+.....+.+|..+. ..+|+.|.++-+. +|.|+++|..|+-.+|.
T Consensus        92 gC~~a~LPedp~D~~~~l~vlv~AE~CAir~ykeic~~T-~GkDprTyeLa~~-IL~eEi~hr~~~~~ll~  160 (172)
T COG2406          92 GCKPAYLPEDPYDIDEILAVLVKAERCAIRAYKEICNLT-AGKDPRTYELAEA-ILREEIEHRTWFLELLG  160 (172)
T ss_pred             CCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHccc-cCCCcchHHHHHH-HHHHHHHHHHHHHHHhc
Confidence               2 2224799999999999999999999999999987 6689999999998 99999999999987764

>PRK09448 DNA starvation/stationary phase protection protein Dps; Provisional

Probab=98.84  E-value=3.9e-07  Score=76.36  Aligned_cols=133  Identities=11%  Similarity=0.113  Sum_probs=113.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------cCC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------LTS  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l~~  142 (239)
                      ...+.+.||..+..++.....|..+.-+..  +..+..+..+|.+++.++++|+..+.+++...||.|.        ...
T Consensus        20 ~~~~~~~Ln~~LA~~~~l~~k~~~~hW~v~--G~~f~~lH~~lee~~~~~~~~~D~iAERi~~lGg~p~~t~~e~~~~s~   97 (162)
T PRK09448         20 KKATIELLNQQLAQFIDLSLITKQAHWNMK--GANFIAVHEMLDGFRTALEDHLDTMAERAVQLGGVALGTTQVVASKTP   97 (162)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCCCCHHHHHHhCC
Confidence            356889999999999999999998776666  7789999999999999999999999999999999985        345


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+.... .+-+..++++..++.-..+...+++.+   .+.+|+.|.++|.. ++.+..+.+-.|+.++
T Consensus        98 i~e~~~-~~~~~~~~l~~l~~d~~~~~~~~r~~i---~e~~D~~T~dll~~-~~~~~eK~~WmL~a~l  160 (162)
T PRK09448         98 LKSYPL-DIHNVQDHLKALADRYAIVANDVRKAI---DEAGDEDTADIFTA-ASRDLDKFLWFIEAHI  160 (162)
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHH---hhcCChhHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            554222 343678999999999999999999998   67789999999998 8988888887777665

>COG0783 Dps DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]

Probab=98.53  E-value=1.2e-05  Score=67.33  Aligned_cols=133  Identities=19%  Similarity=0.225  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------cCCC
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------LTSI  143 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l~~I  143 (239)
                      ..+.+.||.+++.=.........  ++..-.+..+.-+-.+|..+..+-.+|...+.++++..||.|.        ...|
T Consensus        14 ~~~~~~Ln~~lAd~~~Ly~k~~~--~HWnV~G~~F~~lHe~~ee~y~el~~~~DeiAERi~~LGg~p~~t~~~~~~~s~i   91 (156)
T COG0783          14 KKIAEALNQLLADLYVLYLKTHN--YHWNVKGPNFFALHEKLEELYEELAEHVDEIAERIRALGGVPLGTLSEYLKLSSI   91 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhh--cccceeCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccHHHHHHhCCC
Confidence            67888888888764444433333  2333236677778999999999999999999999999999885        4455


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                      +..+. + .+..++++..++--..+.+.+++.+.+|.+.+|..|.+++.. ++.+..+.+=.|+-+
T Consensus        92 ke~~~-~-~~~~~~l~~l~~~~~~l~~~~r~~~~~a~e~gD~~Tadl~~~-~~~~~EK~~Wml~a~  154 (156)
T COG0783          92 KEEPG-D-YTAREMLKELVEDYEYLIKELRKGIELADEAGDEVTADLLTD-IIRELEKTLWMLRAT  154 (156)
T ss_pred             cccCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCChhHHHHHHH-HHHHHHHHHHHHHHh
Confidence            55543 4 789999999999999999999999999999999999999998 888877776555543

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=98.50  E-value=1.3e-05  Score=68.12  Aligned_cols=138  Identities=14%  Similarity=0.146  Sum_probs=113.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc----------
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR----------  139 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~----------  139 (239)
                      ....++++|+..|..|+.|...|..+|..+...     -+.+.|...|.+|+.|...|-+.+.++++...          
T Consensus        21 ~~~~~~e~L~~Ai~~E~eA~~fY~~lae~~~~~-----~~rk~~~~la~eE~~H~~~f~~l~~~~~~~~~~~~~~~~~~~   95 (176)
T COG1633          21 KELSIEELLAIAIRGELEAIKFYEELAERIEDE-----EIRKLFEDLADEEMRHLRKFEKLLEKLTPKEVSSEEEEGEIE   95 (176)
T ss_pred             hhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-----hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhcchh
Confidence            345789999999999999999999999999953     58999999999999999999999999998762          


Q ss_pred             ---cCCCCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        140 ---LTSIEAP-SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       140 ---l~~I~~p-~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                         +..+++. ....-.+..+++..|+..|+.....|..+....   .|.....++.+ ++.+.-.|..++...++.+-+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~I~~a~~~E~~t~~~Y~~~~~~~---~~~~~~~~~~~-~a~~E~~H~~~l~~~~~~~~~  171 (176)
T COG1633          96 SEILEYLQPGKEMEKSVSYLEAIEAAMEAEKDTIEFYEELLDEL---VNEEAKKLFKT-IADDEKGHASGLLSLYNRLTS  171 (176)
T ss_pred             hhhccccCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHc---cCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence               2222220 111345799999999999999999999887754   67778889998 999999999999998887765


Q ss_pred             H
Q psy10513        216 T  216 (239)
Q Consensus       216 ~  216 (239)
                      .
T Consensus       172 ~  172 (176)
T COG1633         172 T  172 (176)
T ss_pred             c
Confidence            4

>cd01044 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain

Probab=98.50  E-value=5.9e-06  Score=65.89  Aligned_cols=117  Identities=19%  Similarity=0.106  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc------cc
Q psy10513         77 KINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK------QE  150 (239)
Q Consensus        77 ~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~------~~  150 (239)
                      .+|..++.|..+..+|..+|....     =+...+.|...|.+|+.|+..|-+++..+|+.|.   .+....      ..
T Consensus         2 ~~~~~~~~E~~~~~~Y~~la~~~~-----~~~~k~~f~~lA~~E~~H~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~   73 (125)
T cd01044           2 RLRKFQKDEITEAAIYRKLAKREK-----DPENREILLKLAEDERRHAEFWKKFLGKRGVPPP---RPKLKIFFYKLLAR   73 (125)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC---CccHHHHHHHHHHH
Confidence            478999999999999999999886     2458999999999999999999999999998875   111100      12


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      +.++..+++.+...|+.....|.++...         ...+.. ++.|+.+|++.|..+++
T Consensus        74 ~~g~~~~l~~~~~~E~~ai~~Y~~~~~~---------~~~~~~-Ii~dE~~H~~~L~~~~~  124 (125)
T cd01044          74 IFGPTFVLKLLERGEERAIEKYDRLLEE---------RPELKE-IIADELEHEEVLIALLD  124 (125)
T ss_pred             HHhHHHHHHHHHHhHHhhHhhHHhhhhh---------hHHHHH-HHHHHHHHHHHHHHhhh
Confidence            3345678888889999999999988776         457776 99999999999988765

Ferritin-like N-terminal domain present in an uncharacterized family of proteins found in bacteria and archaea. These proteins also have a C-terminal CCC1-like transmembrane domain and are thought to be involved in iron and/or manganese transport. This domain has the conserved residues of a diiron center found in other ferritin-like proteins.

>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional

Probab=98.25  E-value=6e-05  Score=79.08  Aligned_cols=190  Identities=17%  Similarity=0.153  Sum_probs=134.8

Q ss_pred             CCCCCCcCCCCCCCCcccCccccCcc-----ccccCCCCCCC-CCCCCCCCCccccchhh-chHHHHHHHHHHHHHHHHH
Q psy10513         16 KDKPKCESTRHEPTKENKPCKETKPK-----SKKSSEPTQSS-QHSPDSLGKTERQTLQN-FHEDCIDKINTQINDEIRS   88 (239)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~s~~rqn-~s~eve~~LN~qIn~EL~A   88 (239)
                      -.-|||--|- |-..+.--|+...-|     --|+|+-..-. +--|.-.|+....-|-. =.+...+.|--.|.+|..+
T Consensus       797 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eil~~Ai~mE~~g  875 (1006)
T PRK12775        797 ATCPKCHRPL-EGDEEYVCCATSELQWRCDDCGKVSEGFAFPYGMCPACGGKLQALDRRKVEDAAALEAIRTAFEIELGG  875 (1006)
T ss_pred             ccCcccCCCC-CCCceeEEecCcceeeehhhhccccccccCCcCcCcccccchhhhhccCcccccHHHHHHHHHHHHHHH
Confidence            3457887776 555555556543322     23555554443 55666666655433332 2366788999999999999


Q ss_pred             HHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCc--cc--cC--CCCCCCccccccHHHHHHHHH
Q psy10513         89 AYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQ--LR--LT--SIEAPSKQEWNTVEDLLTEAL  162 (239)
Q Consensus        89 s~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~--v~--l~--~I~~p~~~~~~s~~eale~AL  162 (239)
                      ...|..+|.-..     -+.+.++|...|.+|++|+..|.+....--..  -.  +.  .+.......+.+..++|+.|+
T Consensus       876 ~~FY~~~A~~a~-----~~~~K~lF~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~lAm  950 (1006)
T PRK12775        876 MAFYARAAKETS-----DPVLKELFLKFAGMEQEHMATLARRYHAAAPSPTEGFKIERAAIMAGVKGRPDDPGNLFRIAI  950 (1006)
T ss_pred             HHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccchhhhhhhhccccCCHHHHHHHHH
Confidence            999999999765     47899999999999999999998886431000  00  00  000111112456899999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCChH-HHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        163 HMEKQLNEKLLKLHACASQHGDAN-LTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       163 ~~Ek~vt~~l~~L~~lA~~~~D~~-t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      ..|+....-|.++.+.+   .|.. ...+++. +.+|+.+|++.|..+++.++.
T Consensus       951 ~~Ekdai~fY~~la~~~---~d~e~~k~l~~~-LA~EEk~Hl~~L~~~~d~~~~ 1000 (1006)
T PRK12775        951 EFERRAVKFFKERVAET---PDGSVERQLYKE-LAAEEREHVALLTTEFERWKQ 1000 (1006)
T ss_pred             HHHHHHHHHHHHHHhhC---CChHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999887754   6765 6899998 999999999999999998874

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=98.05  E-value=0.00019  Score=60.62  Aligned_cols=125  Identities=14%  Similarity=0.148  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccccc
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNT  153 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~s  153 (239)
                      .++.|-+...-|-.|...|+.||...+  .-|++.+|+.|+..|.+|..||..+++.+...+           .  .+++
T Consensus         5 t~~~L~~aF~GEs~a~~rY~~~A~~A~--~eG~~~va~lfr~iA~~E~~HA~~~~~~l~~~~-----------~--~~~~   69 (166)
T COG1592           5 TEENLRKAFAGESMAVMRYLIFAKVAE--EEGYPEIARLFRAIAEAEAVHAKNHLKLLGKLL-----------L--VLGD   69 (166)
T ss_pred             HHHHHHHHhcchHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----------c--cccc
Confidence            456677777888999999999999999  459999999999999999999999999987655           1  4678


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        154 VEDLLTEALHMEKQLNEKLL-KLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       154 ~~eale~AL~~Ek~vt~~l~-~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      +.+-++.+++-|..-..... .....|...++-....++.+ ....+..|.+.+...|+.++
T Consensus        70 ~~eNl~~aieGE~~e~~emyp~~ae~A~~~g~~~~a~~f~~-~~~~Ek~H~~~~~~~Le~~~  130 (166)
T COG1592          70 TRENLEEAIEGETYEITEMYPVFAEVAEEEGFKEAARSFRA-AAKAEKRHAEMFRGLLERLE  130 (166)
T ss_pred             HHHHHHHHHccchHHHHHhChHHHHHHHHcCcHHHHHHHHH-HHHHHHHHHHHHHHHHHhhh
Confidence            88888899887766554444 88889999998888899998 88889999999999998874

>PF13668 Ferritin_2: Ferritin-like domain

Probab=97.96  E-value=0.0013  Score=52.73  Aligned_cols=130  Identities=18%  Similarity=0.141  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccC---CccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCCCCCCccc
Q psy10513         75 IDKINTQINDEIRSAYTYISMASFCTQD---NVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR-LTSIEAPSKQE  150 (239)
Q Consensus        75 e~~LN~qIn~EL~As~~YlsmA~~f~~~---~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~-l~~I~~p~~~~  150 (239)
                      .+.||-.++.|+.+...|...+.-+...   ...=+.+-.+|+..+..|+.|+..|-+.+.  |+.+. -+.+.-+. +.
T Consensus         3 ~~iL~~Al~lE~l~~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~E~~H~~~l~~~l~--g~~~~~~~~~~~~~-~~   79 (137)
T PF13668_consen    3 LDILNFALNLEYLEADFYQQAAEGFTLQDNKAALDPEVRDLFQEIADQEQGHVDFLQAALE--GGRPVPPPAYDFPF-DP   79 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCcccccc-CC
Confidence            3679999999999999999888755211   123355678899999999999999999887  66653 11222222 35


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |.+....+..|+..|......|..+....   .|+.+...+.. ++..+.+|..+++.+|.
T Consensus        80 ~~~~~~~L~~A~~~E~~~~~~Y~g~~~~~---~~~~~~~~~~~-i~~~Ea~H~~~ir~ll~  136 (137)
T PF13668_consen   80 FTDDASFLRLAYTLEDVGVSAYKGAAPQI---EDPELKALAAS-IAGVEARHAAWIRNLLG  136 (137)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            78999999999999999999999988755   68889999988 99999999999998764

>cd01042 DMQH Demethoxyubiquinone hydroxylase, ferritin-like diiron-binding domain

Probab=97.46  E-value=0.0049  Score=52.03  Aligned_cols=120  Identities=11%  Similarity=0.085  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc-------cccccHH
Q psy10513         83 NDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK-------QEWNTVE  155 (239)
Q Consensus        83 n~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~-------~~~~s~~  155 (239)
                      .-|+.|..+|..-++.+.     .+.+..++.+.+.+|..|-..|-+++..+|++|.+-.--....       ...-...
T Consensus        10 AGE~gA~~IY~gQ~~~~~-----~~~~~~~l~~~~~~E~~Hl~~f~~~i~~~~~rps~l~PlW~~~gf~lG~~tal~G~~   84 (165)
T cd01042          10 AGEVGAVRIYRGQLAVAR-----DPAVRPLIKEMLDEEKDHLAWFEELLPELGVRPSLLLPLWYVAGFALGALTALLGKK   84 (165)
T ss_pred             cchHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHhhChH
Confidence            358999999999999887     3899999999999999999999999999999986432110000       0112355


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHH
Q psy10513        156 DLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLAD  208 (239)
Q Consensus       156 eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~  208 (239)
                      -+|....+.|..|...|++-.+.-....|..+.+.|+. |..|+++|-+.-..
T Consensus        85 ~a~~~~~avE~~V~~Hy~~ql~~L~~~~d~~l~~~l~~-~r~DE~~H~d~A~~  136 (165)
T cd01042          85 AAMACTAAVETVVEEHYNDQLRELPAQPDKELRAIIEQ-FRDDELEHADIAEE  136 (165)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            67888899999999999988876544459999999997 99999999876543

Demethoxyubiquinone hydroxylases (DMQH) are members of the ferritin-like, diiron-carboxylate family which are present in eukaryotes (the CLK-1/CAT5 family) and prokaryotes (the Coq7 family). DMQH participates in one of the last steps of ubiquinone biosysnthesis and is responsible for DMQ hydroxylation, resulting in the formation of hydroxyubiquinone, a precursor of ubiquinone. CLK-1 is a mitochondrial inner membrane protein and Coq7 is a proposed interfacial integral membrane protein. Mutations in the Caenorhabditis elegans gene clk-1 affect biological timing and extend longevity. The conserved residues of a diiron center are present in this domain.

>TIGR02284 conserved hypothetical protein

Probab=97.12  E-value=0.014  Score=47.66  Aligned_cols=124  Identities=16%  Similarity=0.075  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC-CCCCCcccccc
Q psy10513         75 IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS-IEAPSKQEWNT  153 (239)
Q Consensus        75 e~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~-I~~p~~~~~~s  153 (239)
                      ++.||++|.....+..-|-..+...+     -+.+..+|...+.+-..|+..|-.++...||.|.-.. +..--+..|.+
T Consensus         2 i~~Ln~Lie~~~D~~~gY~~aae~v~-----~~~lk~~f~~~~~~~~~~~~eL~~~v~~lGg~p~~~gs~~g~lhr~w~~   76 (139)
T TIGR02284         2 IHSLNDLIEISIDGKDGFEESAEEVK-----DPELATLFRRIAGEKSAIVSELQQVVASLGGKPEDHGSMVGSLHQFWGK   76 (139)
T ss_pred             hHHHHHHHHHcccHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            67899999999999999999998775     4789999999999999999999999999999886321 11111124543


Q ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHH
Q psy10513        154 ---------VEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTL  206 (239)
Q Consensus       154 ---------~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L  206 (239)
                               -..+|+.+..-|..+...|.++.+-.  .-++.+...|.. -+.+-..+.+++
T Consensus        77 lks~~~~~~d~aiL~~~e~gEd~~~~~y~~aL~~~--~l~~~~r~~l~~-q~~~i~~~~d~i  135 (139)
T TIGR02284        77 IRATLTPNDDYVVLEEAERGEDRAKKAYDETLADQ--DTPAAARDVALR-QYPGVRACHDVI  135 (139)
T ss_pred             HHHHHcCCChHHHHHHHHHhHHHHHHHHHHHHhcC--CCChHHHHHHHH-HHHHHHHHHHHH
Confidence                     33466777777877777777766532  257777777666 333333333333

Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.

>cd01048 Ferritin_like_AB2 Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=97.11  E-value=0.039  Score=44.72  Aligned_cols=118  Identities=14%  Similarity=0.136  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc-------
Q psy10513         76 DKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK-------  148 (239)
Q Consensus        76 ~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~-------  148 (239)
                      +.|.-.+..|..|-.+|..++-.|.        .-.-|...|..|.+|...|...+...|......+.. +..       
T Consensus         3 ~~L~~Ale~Ek~a~~~Y~~~~~k~~--------~~~~F~~la~~E~~H~~~l~~L~~~~~~~~p~~~~~-~~~f~~~~~~   73 (135)
T cd01048           3 AALLYALEEEKLARDVYLALYEKFG--------GLRPFSNIAESEQRHMDALKTLLERYGLPDPVDPFS-GGVFTNPQYN   73 (135)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--------CcchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccc-cccccchhHH
Confidence            5678889999999999999998773        356788889999999999988887766543221111 000       


Q ss_pred             ----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHH
Q psy10513        149 ----QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTL  206 (239)
Q Consensus       149 ----~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L  206 (239)
                          ....|..++++.++..|+.-...|.++..-+   .|..+...+.. +.....+|.+-+
T Consensus        74 ~l~~~~~~s~~~al~~g~~~E~~~i~~ye~~~~~~---~d~d~k~v~~~-L~~~e~~H~~~f  131 (135)
T cd01048          74 QLVEQGPKSLQDALEVGVLIEELDIADYDRLLERT---QNPDIRDVFEN-LQAASRNHHLPF  131 (135)
T ss_pred             HHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHhc---ccHHHHHHHHH-HHHHHHHHHHHH
Confidence                1244799999999999999998888887755   67889999987 777777776644

Ferritin-like domain found in archaea and bacteria, subgroup 2 (Ferritin_like_AB2). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. The conserved residues of a diiron center are present within the putative active site.

>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids

Probab=96.71  E-value=0.16  Score=47.44  Aligned_cols=169  Identities=14%  Similarity=0.141  Sum_probs=117.8

Q ss_pred             cCCCCCCCCCCCCCCCCcc-------ccchhhchHHHHHH-HHHHHHHHHHHHHHHHHHHHhccc---CCccchhHHHHH
Q psy10513         45 SSEPTQSSQHSPDSLGKTE-------RQTLQNFHEDCIDK-INTQINDEIRSAYTYISMASFCTQ---DNVALFGFAKFF  113 (239)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~-------s~~rqn~s~eve~~-LN~qIn~EL~As~~YlsmA~~f~~---~~v~l~G~A~fF  113 (239)
                      +...=|.+|--|++.|...       ......++..+..+ +-..|..+---+|.- .++.+|..   ++....+.+.|.
T Consensus        26 ~~~~W~PhD~lP~~~~~~F~~~~~~w~~~~~~Lpd~~~~alv~~llTEd~LPsY~~-~l~~~~~~~~~~ga~~~~W~~wv  104 (330)
T PF03405_consen   26 VEKDWQPHDFLPWSEGRNFFLGGKDWRPSQSTLPDDARVALVGNLLTEDNLPSYHR-ELATLFGVRDEDGASDSPWGRWV  104 (330)
T ss_dssp             CGGS--GGGGS-GCCSTTHHHCCHHHHHHHHTS-HHHHHHHHHHHHHHHTHHHHHH-HHTTSTTT--SSSS--SHHHHHH
T ss_pred             HhhCCCccccCCCCccccHhHhcccCCHhhccCCHHHHHHHHHHHHhhhhhhHHHH-HHHhhcCccccCCCCCCcHHHHc
Confidence            3445567777889888775       22233677777544 445555554444432 33455543   122256789999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc--------ccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q psy10513        114 THSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK--------QEW-NTVEDLLTEALHMEKQLNEKLLKLHACASQHGD  184 (239)
Q Consensus       114 ~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~--------~~~-~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D  184 (239)
                      .....||-.||.-|-+||.-.| .|+...+..-..        ..+ .++...|-...-.|+.-.-+..++.++|...+|
T Consensus       105 ~~WTAEEnRHg~~L~~YL~vsg-~vDp~~lE~~r~~~i~~G~~~~~~~~p~~~~vYtsfQE~AT~vsh~n~~~~a~~~~D  183 (330)
T PF03405_consen  105 GRWTAEENRHGDALRDYLYVSG-RVDPVALERTRMYLITAGFDPGFESDPYLGFVYTSFQERATQVSHRNTGRLAKQAGD  183 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCT-SS-CCCCCHCCHHHHHH----S-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             ccccccccccHHHHHHHHHHhC-CCCHHHHHHHHHHHHhcCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999999999999997755 566555553211        123 357889999999999999999999999999999


Q ss_pred             hHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       185 ~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      +.+...+.. +-.++..|......++..+=.+
T Consensus       184 pvL~~il~~-IA~DE~rH~~fy~~iv~~~l~~  214 (330)
T PF03405_consen  184 PVLAQILGR-IAADEARHEAFYRNIVEAYLEL  214 (330)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhh
Confidence            999999998 9999999999999998877544

There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.

>cd01050 Acyl_ACP_Desat Acyl ACP desaturase, ferritin-like diiron-binding domain

Probab=96.54  E-value=0.28  Score=45.13  Aligned_cols=167  Identities=16%  Similarity=0.135  Sum_probs=115.7

Q ss_pred             CCCCCCCCCCCCCCCCcc-------ccchhhchHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccCCccchhHHHHHHHHH
Q psy10513         46 SEPTQSSQHSPDSLGKTE-------RQTLQNFHEDCIDKINTQINDEIRSAYTYI-SMASFCTQDNVALFGFAKFFTHSY  117 (239)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~-------s~~rqn~s~eve~~LN~qIn~EL~As~~Yl-smA~~f~~~~v~l~G~A~fF~~~A  117 (239)
                      ...=|..|--|++.|...       ......+++....+|--.+-.| .+.=.|. .++.+|..++..-+++++|.....
T Consensus        25 ~~~W~p~d~lP~~~~~~f~~~~~~~~~~~~~L~~~~~~~l~~~~itE-d~LP~Y~~~L~~~f~~~~~~~~~w~~w~~~Wt  103 (297)
T cd01050          25 EKDWQPHDFLPDSASEDFDLDVKELRERAAELPDDARVALVGNLLTE-EALPTYHSMLNRLFGLDDESPTAWARWVRRWT  103 (297)
T ss_pred             hhccCCcccCCCCCCCChhhccccCchhhccCCHHHHHHHHHHHHHh-hccHHHHHHHHHHcCcccccccHHHHHHHHHh
Confidence            344455666677755543       2222357777766665555555 2222333 334555433224478999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCCCCCC---------ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHH
Q psy10513        118 KEEIEHMEHLIAYLNKRGGQLRLTSIEAPS---------KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLT  188 (239)
Q Consensus       118 ~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~---------~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~  188 (239)
                      .||-.|+.-|-+|+..- |.+....+..-.         ...-.++...|-...-.|+.-.-.+..+.++|. .+|+.+.
T Consensus       104 aEE~rHg~aL~~YL~~s-g~vdp~~le~~~~~~~~~G~~~~~~~~~~~~~~y~~fqE~aT~v~y~nl~~~a~-~gdPvL~  181 (297)
T cd01050         104 AEENRHGDLLNKYLYLT-GRVDPRALERTRQYLIGSGFDPGTDNSPYRGFVYTSFQELATRISHRNTARLAG-AGDPVLA  181 (297)
T ss_pred             HHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHH
Confidence            99999999999999875 445433332110         001224668888888999999999999999998 8999999


Q ss_pred             HHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        189 DFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       189 ~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      ..+.. +-.++..|.....+++..+-..
T Consensus       182 ~i~~~-IA~DE~rH~~fy~~~v~~~le~  208 (297)
T cd01050         182 KLLGR-IAADEARHEAFYRDIVEALFEL  208 (297)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence            99998 9999999999999998876543

Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 1

>PF09537 DUF2383: Domain of unknown function (DUF2383); InterPro: IPR019052 This entry represents a functionally uncharacterised ferritin like domain

Probab=96.50  E-value=0.013  Score=45.27  Aligned_cols=98  Identities=17%  Similarity=0.187  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC-CCcccc
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEA-PSKQEW  151 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~-p~~~~~  151 (239)
                      +++..||..|.....+...|-.++.-+.     =+.+..+|.+.+.+-..|+..|-.+|...||.|.-..--. -....|
T Consensus         1 ~~i~~Ln~Ll~~~~d~~~~Y~~a~~~~~-----~~~lk~~f~~~~~~~~~~~~~L~~~i~~~Gg~p~~~gs~~g~~~r~~   75 (111)
T PF09537_consen    1 ETIEALNDLLKGLHDGIEGYEKAAEKAE-----DPELKSLFQEFAQERQQHAEELQAEIQELGGEPEESGSFKGALHRAW   75 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH-------SHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--H----HHCHHHH-TT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcccCHHHHHHHHH
Confidence            4678999999999999999999999888     2789999999999999999999999999999885332111 001133


Q ss_pred             ccHH---------HHHHHHHHHHHHHHHHHHHH
Q psy10513        152 NTVE---------DLLTEALHMEKQLNEKLLKL  175 (239)
Q Consensus       152 ~s~~---------eale~AL~~Ek~vt~~l~~L  175 (239)
                      .++.         .+++.+..-|..+...|.++
T Consensus        76 ~~ik~~~~~~d~~aiL~~~~~gE~~~~~~y~~a  108 (111)
T PF09537_consen   76 MDIKSALGGDDDEAILEECERGEDMALEAYEDA  108 (111)
T ss_dssp             THHHHS-----H---------------------
T ss_pred             HHHHHHhcCCCccchhhhhhhhhhhhhhhcccc
Confidence            3322         26666666666666665544

; PDB: 3FSE_B.

>PF03232 COQ7: Ubiquinone biosynthesis protein COQ7; InterPro: IPR011566 Coq7 (also known as Clk-1) is a di-iron carboxylate protein occuring in both prokaryotes and eukaryotes that is essential for ubiquinone biosynthesis [, ]

Probab=96.50  E-value=0.13  Score=43.77  Aligned_cols=128  Identities=11%  Similarity=0.104  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC-CCCCCc------
Q psy10513         76 DKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS-IEAPSK------  148 (239)
Q Consensus        76 ~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~-I~~p~~------  148 (239)
                      ..|----.-|+.|..+|..-...+..    .+.+..++.+..++|..|-..|-+.+..+|.+|.+-. +=....      
T Consensus         5 r~lRVdHAGE~~A~~iY~gQ~~~~~~----~~~~~~~l~~~~~~E~~Hl~~f~~~l~~~~~RpS~l~Plw~~~g~~LG~~   80 (172)
T PF03232_consen    5 RILRVDHAGEVGAVRIYRGQLAVARR----DPELRPFLKEMAEEEKDHLAWFEQLLPELRVRPSLLNPLWYVAGFALGAL   80 (172)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHHHHHhHHcCCCCcHHHHHHHHHHHHHHHH
Confidence            34444456799999999999888873    7889999999999999999999999999998875321 100000      


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChHHHHHhHHHhHHHHHHHHHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQ---HGDANLTDFLEGRYLQEQVDAIKTLAD  208 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~---~~D~~t~~FLe~~fL~EQve~i~~L~~  208 (239)
                      .-.-...-++...-+.|..|...|++-++.-..   ..|..+.+.|.. |..|+.+|.+.-..
T Consensus        81 tal~G~~~~~a~t~avE~~V~~Hy~~Ql~~L~~~~~~~d~~l~~~i~~-~r~DE~~H~d~A~~  142 (172)
T PF03232_consen   81 TALLGDKAAMACTAAVETVVEEHYNDQLRELPAMGEEEDPELRAIIEQ-FRDDELEHRDTAIE  142 (172)
T ss_pred             HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            001124456777788999999999988876653   689999999998 99999999876544

It has been implicated in the aging process as mutations in the Caenorhabditis elegans gene lead to increased lifespan []. Coq7 is a membrane-bound protein that functions as a monooxygenase to hydroxylate demethoxyubiquinone (2-methoxy-5-methyl-6-polyprenyl-1,4-benzoquinone) in the penultimate step of ubiquinone biosynthesis []. Biochemical studies indicate that NADH can serve directly as a reductant for catalytic activation of dioxygen and substrate oxidation by the enzyme, with no requirement for an additional reductase protein component []. This direct reaction with NADH is so far unique amongst members of the di-iron carboxylate protein family. This entry is specific for the bacterial Coq7 proteins.; GO: 0006744 ubiquinone biosynthetic process, 0055114 oxidation-reduction process

>PF05974 DUF892: Domain of unknown function (DUF892); InterPro: IPR010287 This domain is found in several hypothetical bacterial proteins of unknown function

Probab=95.86  E-value=0.87  Score=37.85  Aligned_cols=138  Identities=20%  Similarity=0.202  Sum_probs=106.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC----
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEA----  145 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~----  145 (239)
                      +..-.+..|.+....|-++.-.+-.|+.-..     -|.+..-|..+..+-+.|..+|-.-+...|+.|.-..-+.    
T Consensus         2 l~~~~~~~L~d~y~aE~q~~~~l~~~~~~a~-----~~~L~~~l~~h~~eT~~q~~rLe~~~~~lg~~p~~~~c~~~~gl   76 (159)
T PF05974_consen    2 LRDLFIDELRDLYSAEKQLLKALPKLAEAAS-----SPELKAALEEHLEETEQQIERLEQIFEALGADPSAEKCDAMEGL   76 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-S-CHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCccCcchHHHHH
Confidence            3455678899999999999999999998776     2889999999999999999999999999999884211000    


Q ss_pred             ------CCcc--ccccHHH--HHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        146 ------PSKQ--EWNTVED--LLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       146 ------p~~~--~~~s~~e--ale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                            ....  .-..+.+  .+..+...|..-...|..|+.+|..-++....+.|+. -|.|+...-.+|..+...+
T Consensus        77 ~~e~~~~~~~~~~d~~~~D~~li~a~q~~ehyeIA~Y~tL~~~A~~lG~~e~a~lL~~-~L~EE~~~~~~L~~~a~~~  153 (159)
T PF05974_consen   77 VAEAQELIEEFAEDPAVKDAALIAAAQKVEHYEIAAYGTLIALAKQLGDEEAAQLLEQ-NLDEEEAADEKLTQLAESI  153 (159)
T ss_dssp             HHHHHHHHHT-S-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT-HHHHHHHHH-HHHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHhcccCCchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence                  0000  0011333  3467788999999999999999999999999999998 8999999999998887543

; PDB: 4ERU_B 3OGH_A 2GS4_B 2GYQ_B 3HIU_A.

>PF04305 DUF455: Protein of unknown function (DUF455); InterPro: IPR007402 This is a family of uncharacterised proteins

Probab=95.03  E-value=0.4  Score=43.13  Aligned_cols=134  Identities=13%  Similarity=0.108  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccccc
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNT  153 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~s  153 (239)
                      -..+|....+.||+|...++-..+-|.. +.... |-.=|.+.|.||-.|...+.+++...|.  .+.+++.... -|..
T Consensus        67 r~~llHaiAhIE~~AIdLa~Da~~RF~~-~lP~~-f~~D~~~va~dEarHf~ll~~rL~~lG~--~yGd~P~h~g-Lw~~  141 (253)
T PF04305_consen   67 RAALLHAIAHIELNAIDLALDAIYRFHP-NLPRE-FYDDWLRVADDEARHFRLLRERLEELGS--DYGDLPAHDG-LWEA  141 (253)
T ss_pred             HHHHHHHhcchHHHHHHHHHHHHHHHhc-cCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCCcchhhH-HHHH
Confidence            4577888889999999999999998921 32332 2223346789999999999999999994  6667766552 3543


Q ss_pred             HHHH-------HH-HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        154 VEDL-------LT-EALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       154 ~~ea-------le-~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      ....       |. .-+-+|..--..--.+++.-...+|..+...|+- ++.|+|.|++.=...+..+
T Consensus       142 ~~~t~~dl~~R~A~vp~~~EArGLD~~p~~~~k~~~~gD~~sa~iL~~-I~~DEi~HV~~G~rWf~~~  208 (253)
T PF04305_consen  142 AEQTAHDLLARMALVPRVLEARGLDVTPFIIEKFRSAGDEESAAILEI-ILRDEIGHVAIGNRWFRYL  208 (253)
T ss_pred             HHHhccCHHHHHHHHHHHHHhhCCCCCHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHhhHHHHHHH
Confidence            2221       11 1134555444444455555667799999999997 9999999986544444444

>PF05067 Mn_catalase: Manganese containing catalase; InterPro: IPR007760 Catalases (1

Probab=94.31  E-value=1.1  Score=41.07  Aligned_cols=139  Identities=14%  Similarity=0.195  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHH---HHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC------
Q psy10513         71 HEDCIDKINTQIN---DEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT------  141 (239)
Q Consensus        71 s~eve~~LN~qIn---~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~------  141 (239)
                      ++..-.+|-+|+.   -||.++.+|+.-++-|...  .  -+-..+...+.||+.|.+-|..-|.++-..+...      
T Consensus        18 DP~~A~~LqeqlGG~~GElsaamqYl~Q~~~~~~~--~--~~kdlL~dIatEEl~H~Emvat~I~~Ll~g~~~~~~~~~~   93 (283)
T PF05067_consen   18 DPRFAKLLQEQLGGPFGELSAAMQYLFQSFNMRGP--E--KYKDLLMDIATEELGHVEMVATMIAQLLKGAPPEEQEEAA   93 (283)
T ss_dssp             -HHHHHHHCHHHHSTTSHHHHHHHHHHHHHH-SST--T--TTHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTSSHHHHH
T ss_pred             CHHHHHHHHHHhcCCcchHHHHHHHHHHhhcCCCc--h--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcchhhhhc
Confidence            4556667777774   6999999999999999832  1  1358999999999999998877665543322111      


Q ss_pred             -------CCC---------------CCC-c--ccc--------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHH
Q psy10513        142 -------SIE---------------APS-K--QEW--------NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLT  188 (239)
Q Consensus       142 -------~I~---------------~p~-~--~~~--------~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~  188 (239)
                             .+.               .|. .  .-|        +++..-|...++.|....-.+.+|+.+.   .|+...
T Consensus        94 ~~~p~~~~~~~~~n~~h~i~~g~g~~p~ds~G~PWt~~yv~~sGdl~aDL~~NiaAE~~AR~~yerL~~mT---dDpgvk  170 (283)
T PF05067_consen   94 PGDPLLAAIMGGGNPQHYIVHGGGAYPVDSNGVPWTAAYVQASGDLIADLRSNIAAEQRARLQYERLYEMT---DDPGVK  170 (283)
T ss_dssp             GGGTTTGGGGCSS-SHHHHTSSSS--SB-TTS-B-BGGG----S-HHHHHHHHHHHHHHHHHHHHHHHTT------HHHH
T ss_pred             ccchHHHHhhcCCCchhhhcCCCCCCccCCCCCcccchhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhc---CCccHH
Confidence                   000               010 0  123        4588899999999999999999999976   799999


Q ss_pred             HHhHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy10513        189 DFLEGRYLQEQVDAIKTLADLLTTVRRTQ  217 (239)
Q Consensus       189 ~FLe~~fL~EQve~i~~L~~~L~~L~~~g  217 (239)
                      +.|.. .+.-.+-|...+..-|..|..-.
T Consensus       171 d~L~F-Ll~Re~vH~~~f~~ALe~l~~~~  198 (283)
T PF05067_consen  171 DMLSF-LLAREIVHQQQFGKALEELQENF  198 (283)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHhhC
Confidence            99987 78888888888888877776543

11.1.6 from EC) are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen. Hydrogen peroxide is produced as a consequence of oxidative cellular metabolism and can be converted to the highly reactive hydroxyl radical via transition metals, this radical being able to damage a wide variety of molecules within a cell, leading to oxidative stress and cell death. Catalases act to neutralise hydrogen peroxide toxicity, and are produced by all aerobic organisms ranging from bacteria to man. There are three structurally independent classes of catalases: ubiquitous mono-functional haem-containing catalases (IPR002226 from INTERPRO), bifunctional haem-containing catalase-peroxidases that are closely related to plant peroxidases (IPR000763 from INTERPRO), and non-haem manganese-containing catalases []. This entry represents the non-haem Mn-catalases, which are found in several bacterial species []. The structure of the Mn catalase from Lactobacillus plantarum reveals a homo-hexamer, where each subunit contains a dimanganese active site that is accessed by a single substrate channel []. The dimanganese active site performs a two-electron catalytic cycle that alternately oxidises and reduces the dimanganese atoms in a manner that is similar to its haem-counterpart found in other catalases.; PDB: 1JKV_D 1JKU_D 1O9I_E 2CWL_A 2V8T_B 2V8U_A.

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=93.88  E-value=0.39  Score=40.87  Aligned_cols=60  Identities=18%  Similarity=0.278  Sum_probs=54.4

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      .++.+++..|+.+|.....-|.++++.+   .|..+..++++ +..++.+|.+++..++.++..
T Consensus        23 ~~~~e~L~~Ai~~E~eA~~fY~~lae~~---~~~~~rk~~~~-la~eE~~H~~~f~~l~~~~~~   82 (176)
T COG1633          23 LSIEELLAIAIRGELEAIKFYEELAERI---EDEEIRKLFED-LADEEMRHLRKFEKLLEKLTP   82 (176)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhc---CCHhHHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999998876   67789999999 999999999999999888753

>PF12902 Ferritin-like: Ferritin-like; PDB: 3HL1_A

Probab=91.99  E-value=0.89  Score=40.21  Aligned_cols=62  Identities=21%  Similarity=0.192  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC
Q psy10513         78 INTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT  141 (239)
Q Consensus        78 LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~  141 (239)
                      |...|..|+...-.||..++-..  +-.-.....-.+.-+.|||-|.....+-++..||.|.+.
T Consensus         1 Lq~Ai~lE~atip~YL~a~ySi~--~~~~~~~~~~i~~V~~eEMlHl~l~~Nll~alGg~P~l~   62 (227)
T PF12902_consen    1 LQQAIELELATIPPYLTALYSIK--PGTNEEARNLIRSVAIEEMLHLSLAANLLNALGGSPRLT   62 (227)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHBS---TTSH-HHHHHHHHHHHHHHHHHHHHHHHHHTT------
T ss_pred             CcHHHHHHHHHHHHHHHHHcccC--CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccc
Confidence            56789999999999998776664  222233788899999999999999999999999999886

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=91.93  E-value=0.94  Score=34.91  Aligned_cols=56  Identities=23%  Similarity=0.352  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        156 DLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       156 eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      ++|+.|+..|......|..+...+...+ +.+..++.. +-.++.+|.+.+..++..+
T Consensus         1 e~L~~A~~~E~~~~~~Y~~~a~~~~~~~-p~~~~~f~~-lA~~E~~H~~~~~~l~~~~   56 (137)
T PF02915_consen    1 EILEMAIKMELEAAKFYRELAEKAKDEG-PELKELFRR-LAEEEQEHAKFLEKLLRKL   56 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHH-HHHHHHHHHHHHHHHHCHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhhcc-cHHHHHHHH-HHHHHHHHHHHHHHHHHhh
Confidence            5789999999999999999999998887 999999998 9999999999999988776

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=91.46  E-value=1  Score=34.58  Aligned_cols=55  Identities=25%  Similarity=0.379  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        156 DLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       156 eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      ++|..|+.+|......|..+...+   .|.....+|.. +-.++.+|.+.+..++..+.
T Consensus         1 ~~l~~a~~~E~~~~~~Y~~~a~~~---~~~~~~~~~~~-la~eE~~H~~~l~~~~~~~~   55 (139)
T cd01045           1 EILALAIKMEEEAAEFYLELAEKA---KDPELKKLFEE-LAEEEKEHAERLEELYEKLF   55 (139)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHC---CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            478999999999999999987764   77799999998 99999999999999999885

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>cd07910 MiaE MiaE tRNA-modifying nonheme diiron monooxygenase, ferritin-like diiron-binding domain

Probab=91.39  E-value=8.6  Score=33.03  Aligned_cols=124  Identities=17%  Similarity=0.200  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccccc
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWN  152 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~  152 (239)
                      .+...|-++.+-|..|+-.=++|-+.|.    ..+++..-+-..|.||+.|-++.++.+..||.  .+..+.++.   |.
T Consensus        18 nl~~iL~DHA~CE~KAA~~A~~L~~rY~----~~~~Lv~~m~~LarEEL~HFeqV~~im~~Rgi--~l~~~~~~~---Ya   88 (180)
T cd07910          18 NLDEILIDHAHCEKKAASSAMSLIFRYP----EKPELVEAMSDLAREELQHFEQVLKIMKKRGI--PLGPDSKDP---YA   88 (180)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcC----CcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCCCCCCH---HH
Confidence            5667888899999999998887766665    36889999999999999999999999999995  444444442   22


Q ss_pred             c----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHH
Q psy10513        153 T----------VEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTL  206 (239)
Q Consensus       153 s----------~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L  206 (239)
                      +          +...+..-|--=-.=..+-.....+|..--|..+..|-.. ++.-+..|-...
T Consensus        89 ~~L~k~vR~~~p~~llD~Llv~alIEARScERF~lLa~~l~D~eL~~FY~~-Ll~SEarHy~~y  151 (180)
T cd07910          89 SGLRKLVRKGEPERLLDRLLVAALIEARSCERFALLAPALPDPELKKFYRG-LLESEARHYELF  151 (180)
T ss_pred             HHHHHHcccCChHHHHHHHHHHHHHHHHhHHHHHHHhccCCCHHHHHHHHH-HHHHHhhHHHHH
Confidence            1          1111111111000001112233344444479999999988 887777765543

MiaE is a nonheme diiron monooxygenase that catalyzes the posttranscriptional allylic hydroxylation of a modified nucleoside in tRNA called 2-methylthio-N-6-isopentenyl adenosine (ms2i6A). ms2i6A is found at position 37, next to the anticodon at the 3' position in almost all eukaryotic and bacterial tRNA's that read codons beginning with uridine. The miaE gene is absent in Escherichia coli, a finding consistent with the absence of the hydroxylated derivative of ms2i6A in this species.

>COG3546 Mn-containing catalase [Inorganic ion transport and metabolism]

Probab=90.55  E-value=3.2  Score=37.73  Aligned_cols=138  Identities=14%  Similarity=0.207  Sum_probs=103.8

Q ss_pred             hHHHHHHHHHHH---HHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc-----CC
Q psy10513         71 HEDCIDKINTQI---NDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL-----TS  142 (239)
Q Consensus        71 s~eve~~LN~qI---n~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l-----~~  142 (239)
                      ++...++|.+|+   .-||.++.+||.-++.|.    + .++-..+...+.||..|.+-+..-|+.+......     ..
T Consensus        18 dp~~A~~lqEqlGG~~GElsaamqYl~Q~fn~r----~-~~~~dll~DI~TEEl~HlEmvat~I~~L~~ga~~e~~~~~~   92 (277)
T COG3546          18 NPQLAKLLQEQLGGAFGELSAAMQYLFQGFNVR----D-AKYKDLLMDIGTEELSHLEMVATMINLLNKGATGEGAEEAE   92 (277)
T ss_pred             ChHHHHHHHHHhCCcchHHHHHHHHHHhhcccC----c-hHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchh
Confidence            345566677776   479999999999998887    2 6788899999999999999888777665433332     00


Q ss_pred             CC-------------------CCC-c--ccc--------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhH
Q psy10513        143 IE-------------------APS-K--QEW--------NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLE  192 (239)
Q Consensus       143 I~-------------------~p~-~--~~~--------~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe  192 (239)
                      +.                   .|. +  .-|        ++++.=|...++.|......+..|+++.   .|+.+.+.|.
T Consensus        93 l~~s~~~~~n~~h~~~~~~g~~p~dS~G~pWta~YI~~sGnliaDlr~NiaaE~~aR~~y~rLy~mt---dDpgvrd~L~  169 (277)
T COG3546          93 LYGSGLGGMNPHHISVLLYGAGPADSAGVPWTAAYIVASGNLIADLRSNIAAEARARLQYERLYEMT---DDPGVRDTLS  169 (277)
T ss_pred             hHHhhccCCCchhhhhhccCCCCcccCCCccchhhhhccCccHHHHHHHHHHHhccceeeeeeeecC---CCccHHHHHH
Confidence            00                   011 0  123        4577888999999999999999999876   7999999998


Q ss_pred             HHhHHHHHHHHHHHHHHHHHHhhHH
Q psy10513        193 GRYLQEQVDAIKTLADLLTTVRRTQ  217 (239)
Q Consensus       193 ~~fL~EQve~i~~L~~~L~~L~~~g  217 (239)
                      . +|.-.+-|...+..-|..|+...
T Consensus       170 f-Ll~Re~~H~~~f~kAL~~l~~~~  193 (277)
T COG3546         170 F-LLTREIAHQNAFRKALESLENEE  193 (277)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHhcc
Confidence            7 78888888888888888887654

>COG2941 CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzyme metabolism]

Probab=90.53  E-value=5.8  Score=34.42  Aligned_cols=111  Identities=15%  Similarity=0.174  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccccc----------
Q psy10513         83 NDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWN----------  152 (239)
Q Consensus        83 n~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~----------  152 (239)
                      .-|+.|-++|.--+++....     ..---+++.+++|..|--.+-+++++||.+|.+-.   |   -|.          
T Consensus        51 aGE~~A~~iY~GQ~~~~r~~-----~~R~~l~em~d~E~~HL~~f~~~l~e~~vRPsll~---P---~W~~~~FalGA~a  119 (204)
T COG2941          51 AGELGAQAIYQGQAAVARSP-----EPRIQLKEMADEEIDHLAWFEQRLLELGVRPSLLN---P---LWYAAAFALGAGA  119 (204)
T ss_pred             hhHHHHHHHHhhHHHHHcCc-----chHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHH---H---HHHHHHHHHHHHH
Confidence            46999999999988888733     22238899999999999999999999999886422   1   121          


Q ss_pred             ---cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHH
Q psy10513        153 ---TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTL  206 (239)
Q Consensus       153 ---s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L  206 (239)
                         +..-++-..-+.|..|-..|..=...- .+.|..+...|.. |=.|+++|.+..
T Consensus       120 ~Llgdk~am~~teavE~vIe~Hy~~ql~~L-~~~d~~lr~~l~q-fR~DE~eH~d~A  174 (204)
T COG2941         120 GLLGDKAAMGFTEAVETVIEKHYDGQLREL-PNLDAELRAILAQ-FRDDELEHLDNA  174 (204)
T ss_pred             hhcccHHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHH-HhhHHHHHHHHH
Confidence               123344455556666666665544332 3379999999997 999999988764

>cd07909 YciF YciF bacterial stress response protein, ferritin-like iron-binding domain

Probab=87.78  E-value=14  Score=30.47  Aligned_cols=129  Identities=19%  Similarity=0.139  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC------
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS------  147 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~------  147 (239)
                      .+..|.+....|-++.-.--.|+..     ...|-+..-|..+..+-+.|..+|-.=+..+|..|.-..-..-.      
T Consensus         4 f~~~L~d~y~aE~Q~~~al~~m~~~-----a~~peLk~~l~~H~~eT~~qi~rLe~if~~lg~~~~~~~c~~m~gli~e~   78 (147)
T cd07909           4 FVHELRDLYSAEKQLVKALPKMAKA-----ATSEELKEAFESHLEETEGQVERLEQIFESLGEKPEGKKCKAMEGLIKEA   78 (147)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCcchHHHHHHHHH
Confidence            3556677777777777666666633     35899999999999999999999999999999877532211000      


Q ss_pred             ---cccc--ccHHHHH--HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHH
Q psy10513        148 ---KQEW--NTVEDLL--TEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLAD  208 (239)
Q Consensus       148 ---~~~~--~s~~eal--e~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~  208 (239)
                         ...+  +.+.++.  -.+...|..-..+|..|+..|..-++......|+. .|.|+..--+.|..
T Consensus        79 ~~~~~~~~~~~v~Da~li~aaq~vEHyEIA~YgtL~~~A~~lG~~e~a~lL~~-~L~EE~~~d~~lt~  145 (147)
T cd07909          79 EELIEETGDSAVLDAALIAAAQKVEHYEIAGYGTLRALAKLLGLDDAADLLQE-TLDEEKATDRKLTD  145 (147)
T ss_pred             HHHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHh
Confidence               0122  2356666  78889999999999999999999999999999987 78777666555543

YciF is a bacterial protein of unknown function that is up-regulated when bacteria experience stress conditions, and is highly conserved in a broad range of bacterial species. YciF has a ferritin-like domain. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain

Probab=87.13  E-value=5.6  Score=31.64  Aligned_cols=61  Identities=16%  Similarity=0.122  Sum_probs=54.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      .+.+.|...|+.|-.....|...+..+...+.+.+..+|+. +-.+..+|++.+...|..+.
T Consensus         6 ~~~~~Ln~~la~e~~~~~~y~~~~~~~~g~~f~~l~~~~~~-~~~ee~~Had~laEri~~lG   66 (148)
T cd01052           6 ELIELLNKAFADEWLAYYYYTILAKHVKGPEGEGIKEELEE-AAEEELNHAELLAERIYELG   66 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence            47789999999999999999999999988888999999998 89999999999998887765

DPSL (DPS-like). DPSL is a phylogenetically distinct class within the ferritin-like superfamily, and similar in many ways to the DPS (DNA Protecting protein under Starved conditions) proteins. Like DPS, these proteins are expressed in response to oxidative stress, form dodecameric cage-like particles, preferentially utilize hydrogen peroxide in the controlled oxidation of iron, and possess a short N-terminal extension implicated in stabilizing cellular DNA. This domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. These proteins are distantly related to bacterial ferritins which assemble 24 monomers, each of which have a four-helix bundle with a fifth shorter helix at the C terminus and a diiron (ferroxidase) center. Ferritins contain a center where oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=86.89  E-value=3.8  Score=32.54  Aligned_cols=59  Identities=19%  Similarity=0.204  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         73 DCIDKINTQINDEIR-SAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        73 eve~~LN~qIn~EL~-As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      .+...|-..+..|.. +.-.|-.++..+.  ..+-...+.||...+.+|..|+..|-+.+..
T Consensus        73 ~~~~~l~~~~~~E~~e~~~~y~~~~~~A~--~e~d~~~~~~f~~i~~~E~~H~~~l~~~l~~  132 (134)
T cd01041          73 DTLENLKAAIAGETYEYTEMYPEFAEVAE--EEGFKEAARSFEAIAEAEKVHAERYKKALEN  132 (134)
T ss_pred             hHHHHHHHHHHhhHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            566888889999986 7799999999999  5689999999999999999999998877643

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=86.82  E-value=3.3  Score=32.75  Aligned_cols=59  Identities=20%  Similarity=0.207  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLN  132 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~  132 (239)
                      ..+.+.|...+..|...+-.|-.++..+.  ..|....+.||+..+..|..|+.++-+.+.
T Consensus        62 ~~~~~~le~a~~~E~~~~~~~~~~~~~A~--~egd~~~~~~~~~~~~~E~~H~~~~~~~l~  120 (123)
T cd01046          62 EDTKENLEMMLEGEAGANEGKKDAATEAK--AEGLDEAHDFFHEAAKDEARHGKMLKGLLE  120 (123)
T ss_pred             ccHHHHHHHHHHhHHHHHHhHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56778888999999999999999999998  568999999999999999999999887664

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>COG2833 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.13  E-value=20  Score=32.29  Aligned_cols=125  Identities=14%  Similarity=0.179  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccc
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEW  151 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~  151 (239)
                      .--.+.|......||+|.+.=|-.++-|.  .+.+.-+-.|+ +-|.||-.|-.-+-+++...|.  ...+.++... -|
T Consensus        74 ~g~aallHAiAHIEfNAInLaLDa~~RF~--~~p~~F~~dWm-~VA~EE~~HF~Ll~~~L~~LG~--~YGDfpaHdg-Lw  147 (268)
T COG2833          74 HGRAALLHAIAHIEFNAINLALDAVYRFA--PLPLQFYDDWM-RVADEEAKHFRLLRERLKSLGY--DYGDFPAHDG-LW  147 (268)
T ss_pred             hHHHHHHHHHHHHhhhhHHHHHHHHHHhc--CCcHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCC--CcCCCccccc-HH
Confidence            34578899999999999999999999998  56666555554 4588999999999999999995  4555555442 34


Q ss_pred             ccHHHHHHHHHH---------HHHH---HHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHH
Q psy10513        152 NTVEDLLTEALH---------MEKQ---LNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLA  207 (239)
Q Consensus       152 ~s~~eale~AL~---------~Ek~---vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~  207 (239)
                      ... ++-...+.         +|-.   +|..+.+  +++ +.+|..++..|+= ++.+++.|+.-=.
T Consensus       148 ~~a-~~T~~dl~~RmalVprvLEARGLDatP~l~a--K~~-~~gD~~~~~iLdI-IlrDEigHVaiGn  210 (268)
T COG2833         148 QMA-EATANDLLARMALVPRVLEARGLDATPSLRA--KLA-ETGDSEAAAILDI-ILRDEIGHVAIGN  210 (268)
T ss_pred             HHH-HHhhcCHHHHhhhhhhHHhhccCCCCHHHHH--HHH-HcCchHHHHHHHH-HHhccccceeech
Confidence            321 11111111         2221   2233322  233 5699999999997 9999999875433

>cd00907 Bacterioferritin Bacterioferritin, ferritin-like diiron-binding domain

Probab=86.13  E-value=6.4  Score=31.48  Aligned_cols=61  Identities=15%  Similarity=0.106  Sum_probs=53.5

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      .+.+.|..++..|......|...+..+...+-+.+..|++. +-.+..+|++.+...|..+.
T Consensus         5 ~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~~~~~f~~-~a~ee~~Ha~~lae~i~~lG   65 (153)
T cd00907           5 KVIEALNKALTGELTAINQYFLHARMLEDWGLEKLAERFRK-ESIEEMKHADKLIERILFLE   65 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence            47889999999999999999999999977778889999987 88888899999988877654

Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) best

>PF00210 Ferritin: Ferritin-like domain; InterPro: IPR008331 Ferritin is one of the major non-haem iron storage proteins in animals, plants, and microorganisms []

Probab=85.82  E-value=5.8  Score=30.59  Aligned_cols=60  Identities=20%  Similarity=0.267  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        155 EDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       155 ~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      +++|...+..|......+..++..+...+-+.+..|++. ...+..++..++...+..+.-
T Consensus         1 i~~Ln~~l~~e~~~~~~y~~~~~~~~~~~~~~l~~~~~~-~a~e~~~h~~~l~e~i~~lgg   60 (142)
T PF00210_consen    1 IEALNEQLALELQASQQYLNMHWNFDGPNFPGLAKFFQD-QAEEEREHADELAERILMLGG   60 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHhHH-HHHHHHHHHHHHHHHHhcCCC
Confidence            468899999999999999999999987788889999998 888888999998888777654

It consists of a mineral core of hydrated ferric oxide, and a multi-subunit protein shell that encloses the former and assures its solubility in an aqueous environment. In animals the protein is mainly cytoplasmic and there are generally two or more genes that encode closely related subunits - in mammals there are two subunits which are known as H(eavy) and L(ight). In plants ferritin is found in the chloroplast []. This entry represents the main structural domain of ferritin. The domain is also found in other ferritin-like proteins such as members of the DNA protection during starvation (DPS) family and bacterioferritins.; GO: 0008199 ferric iron binding, 0006879 cellular iron ion homeostasis; PDB: 1N1Q_C 4DYU_E 2YJJ_D 2YJK_B 2VXX_B 3FVB_A 2WLU_A 2XGW_A 2WLA_A 1Z4A_D ....

>PLN00179 acyl- [acyl-carrier protein] desaturase

Probab=85.71  E-value=9.5  Score=36.42  Aligned_cols=168  Identities=16%  Similarity=0.130  Sum_probs=123.3

Q ss_pred             CCCCCCCCCCCCCCCccc-cch------hhchHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccCCcc--chhHHHHHHHH
Q psy10513         47 EPTQSSQHSPDSLGKTER-QTL------QNFHEDC-IDKINTQINDEIRSAYTYISMASFCTQDNVA--LFGFAKFFTHS  116 (239)
Q Consensus        47 ~~~~~~~~~~~~~~~~~s-~~r------qn~s~ev-e~~LN~qIn~EL~As~~YlsmA~~f~~~~v~--l~G~A~fF~~~  116 (239)
                      ..=|..|--|++.|.... +++      ..++..+ ..++-+.|..|---+|+-...-..=-++..|  -.+.+.|-+..
T Consensus        85 k~WqPhDflP~~~~~~F~~~v~~lr~~~~~Lpd~~~v~LvgdmiTEeaLPtY~~~Ln~~~gv~d~tg~~~~~W~~Wvr~W  164 (390)
T PLN00179         85 KSWQPQDFLPDPASEGFYDQVKELRERAAELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASATPWARWTRAW  164 (390)
T ss_pred             hccCccccCCCCccCChHHHHhhhhHhhcCCChhhhhhhhhcchhhhcchHHHHHHHHhcccccccCCCCCchhhhcccc
Confidence            345778888999887652 221      2466555 4556777888877777766533321122333  34589999999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCccccCCCCCCC---------ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH
Q psy10513        117 YKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS---------KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL  187 (239)
Q Consensus       117 A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~---------~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t  187 (239)
                      ..||-.|+.-|-+|+.- -|.|+...|+.-.         .....++...|-..-=.|+.-.-+-.+-.++|.+.+|+.+
T Consensus       165 TAEENRHgdlL~~YLyl-TgrVDm~~iE~t~q~li~~G~d~~~~~~py~~~vYtSFQErAT~VSH~NTarlA~~~gDp~l  243 (390)
T PLN00179        165 TAEENRHGDLLNKYLYL-SGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNTARLAKEHGDAKL  243 (390)
T ss_pred             ccccchHHHHHHHHHhh-ccCcCHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCChHH
Confidence            99999999999999976 4456655544311         0123579999999988999888888889999999999999


Q ss_pred             HHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        188 TDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       188 ~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      ..++.. +-.++..|..-...++..+=.+
T Consensus       244 a~icg~-IAaDE~rHe~fY~~iV~~~le~  271 (390)
T PLN00179        244 AKICGT-IAADEKRHETAYTRIVEKLFEI  271 (390)
T ss_pred             HHHHHH-HhccHHHHHHHHHHHHHHHHhh
Confidence            999998 9999999999999988887554

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=83.44  E-value=8.4  Score=27.99  Aligned_cols=53  Identities=30%  Similarity=0.236  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        157 LLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       157 ale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      +|..++..|......+..++..+.   |+.+..++.. +..++..|.+.+..++..+
T Consensus         2 ~L~~~~~~E~~a~~~y~~~~~~~~---~~~~~~~~~~-~a~~E~~H~~~l~~~~~~~   54 (130)
T cd00657           2 LLNDALAGEYAAIIAYGQLAARAP---DPDLKDELLE-IADEERRHADALAERLREL   54 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC---CHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence            578889999999999999888763   8899999998 9999999999999988765

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>COG3685 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.53  E-value=29  Score=29.41  Aligned_cols=138  Identities=20%  Similarity=0.204  Sum_probs=97.6

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc---cCCCCC
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR---LTSIEA  145 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~---l~~I~~  145 (239)
                      ++.+-..+.|.+....|-++.-.--.||.-+.     .|-+-.-|.++-.|--.|..+|-+-+...|..+.   -..+..
T Consensus         5 t~~d~f~~~LrD~y~aEkq~~kaL~kma~~~~-----~~~Lka~~E~Hl~ET~~qi~rLe~Vfe~~g~~~~~~~cda~~g   79 (167)
T COG3685           5 TLEDLFIDTLRDIYAAEKQILKALPKMARRAQ-----YPELKAAIEKHLEETKGQIERLEQVFERLGKKARRVTCDAMEG   79 (167)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccchHHHHHH
Confidence            35566678888888888888888788887765     6788888888888887887776554444354432   111111


Q ss_pred             CC------ccccccHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        146 PS------KQEWNTVEDLLT-----EALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       146 p~------~~~~~s~~eale-----~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      ..      ...+.+. +++.     .+...|..-..+|..|+..|.+.+|..+...|+. .|+|+..--.||.+++-..
T Consensus        80 iiaegq~i~~~~~~~-evlda~L~~aaq~vEhyEIA~YgtL~a~A~qlG~~~a~~ll~~-~L~eEkatd~~Lt~~a~~~  156 (167)
T COG3685          80 LIAEGQEIMEEFKSN-EVLDAGLIGAAQKVEHYEIACYGTLIAAAEQLGDDEAVKLLEA-ILEEEKATDEKLTQLAPQT  156 (167)
T ss_pred             HHHHHHHHHHhcccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            10      0122221 3333     3456789999999999999999999999999998 9999998888888876544

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=81.59  E-value=7.2  Score=31.61  Aligned_cols=55  Identities=15%  Similarity=0.063  Sum_probs=47.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY  130 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~y  130 (239)
                      ...+.+.|...+..|-.+...|..++....     =+..-..|...+.+|..|...|-+.
T Consensus        99 ~~~~~~~L~~~~~~E~~ai~~Y~~~~~~~~-----d~~~r~ll~~I~~eE~~H~~~L~~~  153 (154)
T cd07908          99 GESIKEMLKLDIASEKAAIAKYKRQAETIK-----DPYIRALLNRIILDEKLHIKILEEL  153 (154)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            345677999999999999999999999764     3778889999999999999988654

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>PF13668 Ferritin_2: Ferritin-like domain

Probab=81.39  E-value=8.4  Score=30.48  Aligned_cols=56  Identities=16%  Similarity=0.151  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-----hhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        155 EDLLTEALHMEKQLNEKLLKLHACA-----SQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       155 ~eale~AL~~Ek~vt~~l~~L~~lA-----~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      .++|..||.+|.....-|.....-.     ....|..+.++++. +..++..|++.|...|.
T Consensus         3 ~~iL~~Al~lE~l~~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~E~~H~~~l~~~l~   63 (137)
T PF13668_consen    3 LDILNFALNLEYLEADFYQQAAEGFTLQDNKAALDPEVRDLFQE-IADQEQGHVDFLQAALE   63 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhccCCHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            6789999999999999999887743     34679999999998 99999999999999885

>PF09537 DUF2383: Domain of unknown function (DUF2383); InterPro: IPR019052 This entry represents a functionally uncharacterised ferritin like domain

Probab=81.28  E-value=14  Score=28.19  Aligned_cols=57  Identities=18%  Similarity=0.162  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        154 VEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       154 ~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      .+++|...+.........|....+.+   .|+.+..+|.. |..+-..++..|..+|..+.
T Consensus         2 ~i~~Ln~Ll~~~~d~~~~Y~~a~~~~---~~~~lk~~f~~-~~~~~~~~~~~L~~~i~~~G   58 (111)
T PF09537_consen    2 TIEALNDLLKGLHDGIEGYEKAAEKA---EDPELKSLFQE-FAQERQQHAEELQAEIQELG   58 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-----SHHHHHHHHH-HHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHC---CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence            46778888888888888888877766   58999999998 99999999999999998875

; PDB: 3FSE_B.

>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional

Probab=81.25  E-value=6.5  Score=41.91  Aligned_cols=57  Identities=12%  Similarity=0.108  Sum_probs=50.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                      .+..++++.|+++|+....-|..+.+.+   +|..+.+++.+ +-+++.+|.+.|..++..
T Consensus       859 ~~~~eil~~Ai~mE~~g~~FY~~~A~~a---~~~~~K~lF~~-LA~eE~~H~~~l~~~~~~  915 (1006)
T PRK12775        859 AAALEAIRTAFEIELGGMAFYARAAKET---SDPVLKELFLK-FAGMEQEHMATLARRYHA  915 (1006)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence            5799999999999999999998887754   89999999998 999999999999887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	239
1rcd_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		2e-34
1rci_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		2e-34
1rcc_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		2e-32
1bg7_A	176	Localized Unfolding At The Junction Of Three Ferrit		7e-32
1r03_A	182	Crystal Structure Of A Human Mitochondrial Ferritin		1e-31
2cei_A	183	Recombinant Human H Ferritin, K86q Mutant, Soaked W		3e-31
3ka8_A	176	Frog M-Ferritin, Eqh Mutant, With Cobalt Length = 1		3e-31
1mfr_A	176	Crystal Structure Of M Ferritin Length = 176		4e-31
3ajo_A	182	Crystal Structure Of Wild-Type Human Ferritin H Cha		5e-31
2chi_A	183	Recombinant Human H Ferritin, K86q And E27d Mutant		9e-31
2clu_A	183	Recombinant Human H Ferritin, K86q And E107d Mutant		9e-31
3ka9_A	176	Frog M-Ferritin, Eeh Mutant, With Cobalt Length = 1		9e-31
3ka6_A	176	Frog M-Ferritin, Eed Mutant, With Cobalt Length = 1		1e-30
3ajq_A	182	Crystal Structure Of Human H Ferritin E140q Mutant		1e-30
3shx_A	176	Frog M-Ferritin With Magnesium, L134p Mutant Length		2e-30
2cn7_A	183	Recombinant Human H Ferritin, K86q, E27d And E107d		2e-30
3ajp_A	182	Crystal Structure Of Human H Ferritin E140a Mutant		2e-30
3sh6_A	176	Frog M-Ferritin, D122r Mutant, With Magnesium Lengt		3e-30
3se1_A	176	Frog M-Ferritin With Magnesium, R72d Mutant Length		3e-30
4dyx_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		3e-28
3es3_A	183	Directing Noble Metal Ion Chemistry Within A Design		4e-28
3erz_A	183	Directing Noble Metal Ion Chemistry Within A Design		1e-27
2z6m_A	176	Crystal Structure Of Human Ferritin H8 As Biotempla		1e-27
3a68_A	212	Crystal Structure Of Plant Ferritin Reveals A Novel		5e-27
1h96_A	182	Recombinant Mouse L-Chain Ferritin Length = 182		2e-26
4dyy_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		2e-26
3a9q_A	212	Crystal Structure Analysis Of E173a Variant Of The		3e-26
2v2n_A	174	Mutant R59m Recombinant Horse Spleen Apoferritin Co		7e-26
3np2_X	174	Crystal Structure Of Pd(Allyl)APO-E45cC48A-Rhlfr Le		8e-26
3af9_X	174	Crystal Structure Of Pd(Allyl)APO-C48afr Length = 1		1e-25
2zg8_X	174	Crystal Structure Of Pd(Allyl)APO-H49afr Length = 1		2e-25
2za6_A	175	Recombinant Horse L-Chain Apoferritin Length = 175		2e-25
2g4h_A	174	Anomalous Substructure Of Apoferritin Length = 174		2e-25
2v2p_A	174	Mutant (E53,56,57,60q And R59m) Recombinant Horse S		2e-25
3af8_X	174	Crystal Structure Of Pd(Ally)APO-C126afr Length = 1		3e-25
4dz0_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		3e-25
2zur_X	174	Crystal Structure Of Rh(Nbd)APO-Fr Length = 174		4e-25
3np0_X	174	Crystal Structure Of Pd(Allyl)APO-E45cH49AR52H-Rhlf		4e-25
2za7_A	171	Recombinant Horse L-Chain Apoferritin N-Terminal De		5e-25
1ies_A	174	Tetragonal Crystal Structure Of Native Horse Spleen		5e-25
3noz_X	174	Crystal Structure Of Pd(Allyl)APO-E45cR52H-Rhlfr Le		5e-25
2gyd_A	170	Complex Of Equine Apoferritin With The H-Diaziflura		6e-25
3kxu_A	191	Crystal Structure Of Human Ferritin Ftl498instc Pat		6e-25
3hx2_A	192	Crystal Structure Of Human Ferritin Phe167serfsx26		6e-25
2v2l_A	174	Mutant (E53,56,57,60q) Recombinant Horse Spleen Apo		8e-25
2fg4_A	174	Structure Of Human Ferritin L Chain Length = 174		1e-24
2ffx_J	173	Structure Of Human Ferritin L. Chain Length = 173		1e-24
2zg9_X	174	Crystal Structure Of Pd(Allyl)APO-H114afr Length =		2e-24
2za8_A	167	Recombinant Horse L-Chain Apoferritin N-Terminal De		3e-24
3vnx_A	204	Crystal Structure Of Ferritin From Multicellular Gr		5e-24
3kx9_B	173	Engineering A Closed Form Of The Archaeoglobus Fulg		1e-14
1s3q_A	173	Crystal Structures Of A Novel Open Pore Ferritin Fr		1e-13
1z6o_M	191	Crystal Structure Of Trichoplusia Ni Secreted Ferri		4e-13
1vlg_A	176	Crystal Structure Of Ferritin (Tm1128) From Thermot		5e-13
1z4a_A	164	Ferritin From T. Maritima Length = 164		6e-13
2jd6_0	174	Crystal Structure Of The As Isolated Ferritin From		2e-12
2x17_0	173	The X-Ray Structure Of Ferritin From Pyrococcus Fur		3e-12
1eum_A	165	Crystal Structure Of The E.Coli Ferritin Ecftna Len		2e-10
3e6r_A	168	Crystal Structure Of Apo-Ferritin From Pseudo-Nitzs		5e-09
3egm_A	181	Structural Basis Of Iron Transport Gating In Helico		7e-09
3bve_B	181	Structural Basis For The Iron Uptake Mechanism Of H		9e-09
1krq_A	167	Crystal Structure Analysis Of Campylobacter Jejuni		5e-07
3qz3_A	184	The Crystal Structure Of Ferritin From Vibrio Chole		1e-06

>pdb|1RCD|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 99/153 (64%)
Query: 63  ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIE 122
           E Q  QNFH+DC   +N  +N +  S+Y Y+SMAS+  +D+VAL  FAKFF    +EE E
Sbjct: 2   ESQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKE 61
Query: 123 HMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           H E LI Y N+RGG++ L S+E P + +W    + L  AL ++K +N+ LL LHA A+  
Sbjct: 62  HAEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADK 121
Query: 183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            D ++TDFLE  YL E V+ IK L D +T++++
Sbjct: 122 SDPHMTDFLESPYLSESVETIKKLGDHITSLKK 154

>pdb|1RCI|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 99/153 (64%)
Query: 63  ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIE 122
           E Q  QNFH+DC   +N  +N +  S+Y Y+SMAS+  +D+VAL  FAKFF    +EE E
Sbjct: 2   ESQVRQNFHQDCEAGLNRTVNLKFYSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKE 61
Query: 123 HMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           H E LI Y N+RGG++ L S+E P + +W    + L  AL ++K +N+ LL LHA A+  
Sbjct: 62  HAEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADK 121
Query: 183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            D ++TDFLE  YL E V+ IK L D +T++++
Sbjct: 122 SDPHMTDFLESPYLSESVETIKKLGDHITSLKK 154

>pdb|1RCC|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score =  135 bits (340), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 95/153 (62%)
Query: 63  ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIE 122
           E Q  QNFH+DC   +N  +N +  S+Y Y+SMAS+  +D+VAL  FAKFF         
Sbjct: 2   ESQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSAAAKA 61
Query: 123 HMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           H E LI Y N+RGG++ L S+E P + +W    + L  AL ++K +N+ LL LHA A+  
Sbjct: 62  HAEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADK 121
Query: 183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            D ++TDFLE  YL E V+ IK L D +T++++
Sbjct: 122 SDPHMTDFLESPYLSESVETIKKLGDHITSLKK 154

>pdb|1BG7|A Chain A, Localized Unfolding At The Junction Of Three Ferritin Subunits. A Mechanism For Iron Release? Length = 176

Iteration: 1
 Score =  133 bits (335), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QNFH DC   IN  +N E+ ++YTY+SMA +  +D++AL   AKFF     EE EH 
Sbjct: 4   QVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   NKRGG++ L  ++ P + EW    + +  AL +EK +N+ LL LH   S   D
Sbjct: 64  EKLMKDQNKRGGRIVLQDVQKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDRDLMS 227
            +L DFLE  Y +EQV +IK L D +T ++R  L       YL D+  M 
Sbjct: 124 PHLCDFLETEYPEEQVKSIKQLGDYITNLKRLGLPQNGMGEYLFDKHTMG 173

>pdb|1R03|A Chain A, Crystal Structure Of A Human Mitochondrial Ferritin Length = 182

Iteration: 1
 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           QNFH D    IN QIN E+ ++Y Y+SMA + ++D+VAL  F+++F H  +EE EH E L
Sbjct: 10  QNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKL 69
Query: 128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
           +   N+RGG++RL  I+ P + +W +    +  AL +EK +N+ LL+LHA AS  GD +L
Sbjct: 70  MRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHL 129
Query: 188 TDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKFSMH--GNDN 237
            DFLE  YL EQV +IK L D +  +   ++   D  L    F  H  GN+N
Sbjct: 130 CDFLETYYLNEQVKSIKELGDHVHNL--VKMGAPDAGLAEYLFDTHTLGNEN 179

>pdb|2CEI|A Chain A, Recombinant Human H Ferritin, K86q Mutant, Soaked With Zn Length = 183

Iteration: 1
 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 96/151 (63%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 8   QVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 67
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 68  EKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKND 127
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 128 PHLCDFIETHYLNEQVKAIKELGDHVTNLRK 158

>pdb|3KA8|A Chain A, Frog M-Ferritin, Eqh Mutant, With Cobalt Length = 176

Iteration: 1
 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+   D
Sbjct: 64  EKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDR 223
            +L DFLE  YL+EQV  IK + D +T ++R  L       YL D+
Sbjct: 124 PHLCDFLESEYLEEQVKHIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>pdb|1MFR|A Chain A, Crystal Structure Of M Ferritin Length = 176

Iteration: 1
 Score =  131 bits (329), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+   D
Sbjct: 64  EKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDR 223
            +L DFLE  YL+EQV  IK + D +T ++R  L       YL D+
Sbjct: 124 PHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>pdb|3AJO|A Chain A, Crystal Structure Of Wild-Type Human Ferritin H Chain Length = 182

Iteration: 1
 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 96/151 (63%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 7   QVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 66
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 67  EKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKND 126
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 127 PHLCDFIETHYLNEQVKAIKELGDHVTNLRK 157

>pdb|2CHI|A Chain A, Recombinant Human H Ferritin, K86q And E27d Mutant Length = 183

Iteration: 1
 Score =  130 bits (326), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN ++ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 8   QVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 67
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 68  EKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKND 127
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 128 PHLCDFIETHYLNEQVKAIKELGDHVTNLRK 158

>pdb|2CLU|A Chain A, Recombinant Human H Ferritin, K86q And E107d Mutant Length = 183

Iteration: 1
 Score =  130 bits (326), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 8   QVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 67
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH++K +N+ LL+LH  A+   D
Sbjct: 68  EKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLDKNVNQSLLELHKLATDKND 127
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 128 PHLCDFIETHYLNEQVKAIKELGDHVTNLRK 158

>pdb|3KA9|A Chain A, Frog M-Ferritin, Eeh Mutant, With Cobalt Length = 176

Iteration: 1
 Score =  130 bits (326), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+   D
Sbjct: 64  EKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDR 223
            +L DFLE  YL+E+V  IK + D +T ++R  L       YL D+
Sbjct: 124 PHLCDFLESEYLEEEVKHIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>pdb|3KA6|A Chain A, Frog M-Ferritin, Eed Mutant, With Cobalt Length = 176

Iteration: 1
 Score =  129 bits (325), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+   D
Sbjct: 64  EKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDR 223
            +L DFLE  YL+E+V  IK + D +T ++R  L       YL D+
Sbjct: 124 PHLCDFLESEYLEEEVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>pdb|3AJQ|A Chain A, Crystal Structure Of Human H Ferritin E140q Mutant Length = 182

Iteration: 1
 Score =  129 bits (325), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 7   QVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 66
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 67  EKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKND 126
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL +QV AIK L D +T +R+
Sbjct: 127 PHLCDFIETHYLNQQVKAIKELGDHVTNLRK 157

>pdb|3SHX|A Chain A, Frog M-Ferritin With Magnesium, L134p Mutant Length = 176

Iteration: 1
 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 7/166 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+   D
Sbjct: 64  EKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDR 223
            +L DFLE  Y +EQV  IK + D +T ++R  L       YL D+
Sbjct: 124 PHLCDFLESEYPEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>pdb|2CN7|A Chain A, Recombinant Human H Ferritin, K86q, E27d And E107d Mutant Length = 183

Iteration: 1
 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 96/151 (63%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN ++ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 8   QVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 67
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH++K +N+ LL+LH  A+   D
Sbjct: 68  EKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLDKNVNQSLLELHKLATDKND 127
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 128 PHLCDFIETHYLNEQVKAIKELGDHVTNLRK 158

>pdb|3AJP|A Chain A, Crystal Structure Of Human H Ferritin E140a Mutant Length = 182

Iteration: 1
 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 95/151 (62%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 7   QVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 66
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 67  EKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKND 126
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL  QV AIK L D +T +R+
Sbjct: 127 PHLCDFIETHYLNAQVKAIKELGDHVTNLRK 157

>pdb|3SH6|A Chain A, Frog M-Ferritin, D122r Mutant, With Magnesium Length = 176

Iteration: 1
 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 7/166 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+    
Sbjct: 64  EKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVR 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDR 223
            +L DFLE  YL+EQV  IK + D +T ++R  L       YL D+
Sbjct: 124 PHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>pdb|3SE1|A Chain A, Frog M-Ferritin With Magnesium, R72d Mutant Length = 176

Iteration: 1
 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 7/166 (4%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NK GG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+   D
Sbjct: 64  EKFMKYQNKDGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQL-------YLVDR 223
            +L DFLE  YL+EQV  IK + D +T ++R  L       YL D+
Sbjct: 124 PHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>pdb|4DYX|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant 4his- Delta C-star Length = 172

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 3   QVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFHHQSHEEHEHA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             L+   N+RGG++ L  I+ P + +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 63  HKLMKLQNQRGGRIFLQDIQKPDEDDWESGLNAMEAALHLEKNVNQSLLELHKLATDKND 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 123 PHLADFIETHYLNEQVKAIKELGDHVTNLRK 153

>pdb|3ES3|A Chain A, Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. The Complex With Gold Ions. Ferritin H8-H9x Mutant Length = 183

Iteration: 1
 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 94/151 (62%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+ +D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE  H 
Sbjct: 8   QVRQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEERCHA 67
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P + +W +  + +  AL +EK +N+ LL+LH  A+   D
Sbjct: 68  EKLMKLQNQRGGRIFLQDIQKPDRDDWESGLNAMEAALQLEKNVNQSLLELHKLATDKND 127
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L+DF+E  YL  QV AIK L D +T +R+
Sbjct: 128 PHLSDFIETHYLNCQVCAIKCLGDHVTNLRK 158

>pdb|3ERZ|A Chain A, Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. Mercury Ions On The Three-Fold Channel Length = 183

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 93/151 (61%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+ +D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE  H 
Sbjct: 8   QVRQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEERCHA 67
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P + +W +  + +  AL +EK +N+ LL+LH  A+   D
Sbjct: 68  EKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMEAALQLEKNVNQSLLELHKLATDKND 127
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL  QV AIK L D +T +R+
Sbjct: 128 PHLCDFIETHYLNCQVCAIKCLGDHVTNLRK 158

>pdb|2Z6M|A Chain A, Crystal Structure Of Human Ferritin H8 As Biotemplate For Noble Metal Nanoparticle Synthesis Length = 176

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 93/151 (61%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+ +D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE  H 
Sbjct: 7   QVRQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEERCHA 66
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P + +W +  + +  AL +EK +N+ LL+LH  A+   D
Sbjct: 67  EKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMEAALQLEKNVNQSLLELHKLATDKND 126
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL  QV AIK L D +T +R+
Sbjct: 127 PHLCDFIETHYLNCQVCAIKCLGDHVTNLRK 157

>pdb|3A68|A Chain A, Crystal Structure Of Plant Ferritin Reveals A Novel Metal Binding Site That Functions As A Transit Site For Metal Transfer In Ferritin Length = 212

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           Q + ++    +N QIN E   +Y Y +M ++  +DNVAL G AKFF  S +EE EH E L
Sbjct: 39  QKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKL 98
Query: 128 IAYLNKRGGQLRLTSIEAP----SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHG 183
           + Y NKRGG+++L SI  P       +       +  AL +EK  NEKLL LH+ A+++G
Sbjct: 99  MEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNG 158
Query: 184 DANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT 216
           D  L DF+E  YL EQV+AIK +++ +  +RR 
Sbjct: 159 DVQLADFVETEYLGEQVEAIKRISEYVAQLRRV 191

>pdb|1H96|A Chain A, Recombinant Mouse L-Chain Ferritin Length = 182

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 87/152 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  F  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+ + N RGG+     ++ PS+ EW   ++ +  AL MEK LN+ LL LHA  S   D
Sbjct: 63  ERLLEFQNDRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT 216
            +L DFLE  YL ++V  IK + + LT +RR 
Sbjct: 123 PHLCDFLESHYLDKEVKLIKKMGNHLTNLRRV 154

>pdb|4DYY|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant Mic1 Length = 172

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 94/151 (62%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 3   QVRQNYHQDSEAAINRQINLELYASYVYLSMSEYFDRDDVALKNFAKYFHHQSHEEHEHA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             L+    +RGG++ L  I+   + +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 63  HKLMKLQEQRGGRIFLQDIQKADEDDWESGLNAMEAALHLEKNVNQSLLELHKLATDKND 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 123 PHLADFIETHYLNEQVKAIKELGDHVTNLRK 153

>pdb|3A9Q|A Chain A, Crystal Structure Analysis Of E173a Variant Of The Soybean Ferritin Sfer4 Length = 212

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 4/153 (2%)
Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           Q + ++    +N QIN E   +Y Y +M ++  +DNVAL G AKFF  S +EE EH E L
Sbjct: 39  QKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKL 98
Query: 128 IAYLNKRGGQLRLTSIEAP----SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHG 183
           + Y NKRGG+++L SI  P       +       +  AL +EK  NEKLL LH+ A+++G
Sbjct: 99  MEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNG 158
Query: 184 DANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT 216
           D  L DF+E  YL  QV+AIK +++ +  +RR 
Sbjct: 159 DVQLADFVETEYLGAQVEAIKRISEYVAQLRRV 191

>pdb|2V2N|A Chain A, Mutant R59m Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E++E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKMEGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|3NP2|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cC48A-Rhlfr Length = 174

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G A FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVAHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|3AF9|X Chain X, Crystal Structure Of Pd(Allyl)APO-C48afr Length = 174

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G A FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVAHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|2ZG8|X Chain X, Crystal Structure Of Pd(Allyl)APO-H49afr Length = 174

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCAFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|2ZA6|A Chain A, Recombinant Horse L-Chain Apoferritin Length = 175

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 4   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGA 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 64  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQAD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 124 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 154

>pdb|2G4H|A Chain A, Anomalous Substructure Of Apoferritin Length = 174

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|2V2P|A Chain A, Mutant (E53,56,57,60q And R59m) Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +++++  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|3AF8|X Chain X, Crystal Structure Of Pd(Ally)APO-C126afr Length = 174

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLADFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|4DZ0|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant Mic1 Labeled With A Dansyl Fluorophore Length = 172

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 93/151 (61%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN E+ ++Y Y+SM+ +  +D+VAL  FA +F H   EE EH 
Sbjct: 3   QVRQNYHQDSEAAINRQINLELYASYVYLSMSEYFDRDDVALKNFACYFHHQSHEEHEHA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
             L+    +RGG++ L  I+   + +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 63  HKLMKLQEQRGGRIFLQDIQKADEDDWESGLNAMEAALHLEKNVNQSLLELHKLATDKND 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DF+E  YL EQV AIK L D +T +R+
Sbjct: 123 PHLADFIETHYLNEQVKAIKELGDHVTNLRK 153

>pdb|2ZUR|X Chain X, Crystal Structure Of Rh(Nbd)APO-Fr Length = 174

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVXHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|3NP0|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cH49AR52H-Rhlfr Length = 174

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVCAFFHELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|2ZA7|A Chain A, Recombinant Horse L-Chain Apoferritin N-Terminal Deletion Mutant (Residues 1-4) Length = 171

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 86/148 (58%)
Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  E L
Sbjct: 3   QNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERL 62
Query: 128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
           +   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D +L
Sbjct: 63  LKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQADPHL 122
Query: 188 TDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 CDFLESHFLDEEVKLIKKMGDHLTNIQR 150

>pdb|1IES|A Chain A, Tetragonal Crystal Structure Of Native Horse Spleen Ferritin Length = 174

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|3NOZ|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cR52H-Rhlfr Length = 174

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVCHFFHELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|2GYD|A Chain A, Complex Of Equine Apoferritin With The H-Diaziflurane Photolabeling Reagent Length = 170

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 2   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGA 61
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 62  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQAD 121
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 122 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 152

>pdb|3KXU|A Chain A, Crystal Structure Of Human Ferritin Ftl498instc Pathogenic M Length = 191

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  D    +N+ +N  ++++YTY+S+  +  +D+VAL G + FF    +E+ E  
Sbjct: 4   QIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGY 63
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     I+ P++ EW    D +  A+ +EK+LN+ LL LHA  S   D
Sbjct: 64  ERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTD 123
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT + R
Sbjct: 124 PHLCDFLETHFLDEEVKLIKKMGDHLTNLHR 154

>pdb|3HX2|A Chain A, Crystal Structure Of Human Ferritin Phe167serfsx26 Mutant. This File Is A Part 13 OF THE SPLIT ENTRY AND CONTAINS THE Copies 1 And 2 Of The Total Six Copies Of The Biological Unit That Are Present In The Crystallographic Asymmetric Unit. The Entire Structure Contains Six Copies Of The Biological Unit In The Crystallographic Asymmetric Unit And Is Described In Remark 400 Length = 192

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  D    +N+ +N  ++++YTY+S+  +  +D+VAL G + FF    +E+ E  
Sbjct: 5   QIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGY 64
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     I+ P++ EW    D +  A+ +EK+LN+ LL LHA  S   D
Sbjct: 65  ERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTD 124
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT + R
Sbjct: 125 PHLCDFLETHFLDEEVKLIKKMGDHLTNLHR 155

>pdb|2V2L|A Chain A, Mutant (E53,56,57,60q) Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score =  110 bits (274), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 87/151 (57%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +++ +  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKRQGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|2FG4|A Chain A, Structure Of Human Ferritin L Chain Length = 174

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  D    +N+ +N  ++++YTY+S+  +  +D+VAL G + FF    +E+ E  
Sbjct: 3   QIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGY 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     I+ P++ EW    D +  A+ +EK+LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT + R
Sbjct: 123 PHLCDFLETHFLDEEVKLIKKMGDHLTNLHR 153

>pdb|2FFX|J Chain J, Structure Of Human Ferritin L. Chain Length = 173

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  D    +N+ +N  ++++YTY+S+  +  +D+VAL G + FF    +E+ E  
Sbjct: 3   QIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGY 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     I+ P++ EW    D +  A+ +EK+LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT + R
Sbjct: 123 PHLCDFLETHFLDEEVKLIKKMGDHLTNLHR 153

>pdb|2ZG9|X Chain X, Crystal Structure Of Pd(Allyl)APO-H114afr Length = 174

Iteration: 1
 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 86/151 (56%)
Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGA 62
Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL L A  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLAALGSAQAD 122
Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  +L E+V  IK + D LT ++R
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153

>pdb|2ZA8|A Chain A, Recombinant Horse L-Chain Apoferritin N-Terminal Deletion Mutant (Residues 1-8) Length = 167

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 82/138 (59%)
Query: 78  INTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQ 137
           +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +E+ E  E L+   N+RGG+
Sbjct: 9   VNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGR 68
Query: 138 LRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQ 197
                ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D +L DFLE  +L 
Sbjct: 69  ALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLD 128
Query: 198 EQVDAIKTLADLLTTVRR 215
           E+V  IK + D LT ++R
Sbjct: 129 EEVKLIKKMGDHLTNIQR 146

>pdb|3VNX|A Chain A, Crystal Structure Of Ferritin From Multicellular Green Algae, Ulva Pertusa Length = 204

Iteration: 1
 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 8/164 (4%)
Query: 70  FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIA 129
           +H +C   IN QIN E   +Y Y ++ S+  +DNV L GFAKFF  +  EE EH   L+ 
Sbjct: 36  YHIECEAAINEQINIEYTISYVYHALHSYFARDNVGLPGFAKFFKEASDEEREHAHMLMD 95
Query: 130 YLNKRGGQLRLTSIEAPSKQEWN--TVEDL--LTEALHMEKQLNEKLLKLHACASQHGDA 185
           Y  KRGG++ L  + AP  +  N    E L  +  AL +EK   +KL  L A A +H DA
Sbjct: 96  YQTKRGGRVELKPLAAPEMEFANDDKGEALYAMELALSLEKLNFQKLQALQAIADKHKDA 155
Query: 186 NLTDFLEGRYLQEQVDAIKTLADLLTTVRR----TQLYLVDRDL 225
            L DF+EG  L EQVDA+K  A  ++ +RR      +YL+D++L
Sbjct: 156 ALCDFVEGGLLSEQVDAVKEHAVYVSQLRRVGKGVGVYLLDQEL 199

>pdb|1S3Q|A Chain A, Crystal Structures Of A Novel Open Pore Ferritin From The Hyperthermophilic Archaeon Archaeoglobus Fulgidus Length = 173

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 9/165 (5%)
Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E  ++ +N QIN EI SAY Y+S AS+   D++ L GF+ +    ++EE+ H      ++
Sbjct: 6   EKXVEALNRQINAEIYSAYLYLSXASYF--DSIGLKGFSNWXRVQWQEELXHAXKXFDFV 63
Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
           ++RGG+++L ++E P   EW++           E  + +++ +L   A Q  D    +FL
Sbjct: 64  SERGGRVKLYAVEEPPS-EWDSPLAAFEHVYEHEVNVTKRIHELVEXAXQEKDFATYNFL 122
Query: 192 EGRYLQEQVDAIKTLADLLTTVR-----RTQLYLVDRDLMSGKFS 231
           +  Y+ EQV+   +  D++  +R     +  L  +D++L   +F+
Sbjct: 123 QW-YVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKELSLRQFT 166

>pdb|1Z6O|M Chain M, Crystal Structure Of Trichoplusia Ni Secreted Ferritin Length = 191

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 70  FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIA 129
            H  C + +  QI  E+ ++  Y++M +  ++D V   GFA+ F  +  EE EH   LI 
Sbjct: 17  MHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIE 76
Query: 130 YLNKRGGQLR----LTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLK-LHACA--SQH 182
           YL  RG        L  +  P++  W    + L  AL ME  + + +   + AC   S+ 
Sbjct: 77  YLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEF 136
Query: 183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRDLMSGKF 230
            D +L D+L G +L+EQ    + LA   +T+++    L+DR    G+F
Sbjct: 137 NDYHLVDYLTGDFLEEQYKGQRDLAGKASTLKK----LMDRHEALGEF 180

>pdb|1VLG|A Chain A, Crystal Structure Of Ferritin (Tm1128) From Thermotoga Maritima At 2.00 A Resolution Length = 176

Iteration: 1
 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 78  INTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQ 137
           +N Q+N EI S+Y Y+SMA++   D     GFA +     +EE+ H      Y+ +RGG+
Sbjct: 24  LNDQLNREIYSSYLYLSMATYF--DAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGR 81
Query: 138 LRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQ 197
           + L +IE P    WN ++D    AL  E+ + + +  +   AS+  D     FL+  ++ 
Sbjct: 82  VELEAIEKPPSN-WNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKW-FVD 139
Query: 198 EQV---DAIKTLADLLTTV--RRTQLYLVDRDL 225
           EQV   D ++ + DLL     + + ++ +DR L
Sbjct: 140 EQVEEEDQVREILDLLEKANGQMSVIFQLDRYL 172

>pdb|1Z4A|A Chain A, Ferritin From T. Maritima Length = 164

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 78  INTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQ 137
           +N Q+N EI S+Y Y+SMA++   D     GFA +     +EE+ H      Y+ +RGG+
Sbjct: 12  LNEQLNREIYSSYLYLSMATYF--DAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGR 69
Query: 138 LRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQ 197
           + L +IE P    WN ++D    AL  E+ + + +  +   AS+  D     FL+  ++ 
Sbjct: 70  VELEAIEKPPSN-WNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKW-FVD 127
Query: 198 EQV---DAIKTLADLLTTV--RRTQLYLVDRDL 225
           EQV   D ++ + DLL     + + ++ +DR L
Sbjct: 128 EQVEEEDQVREILDLLEKANGQMSVIFQLDRYL 160

>pdb|2JD6|0 Chain 0, Crystal Structure Of The As Isolated Ferritin From The Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus Length = 174

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E  +  +N Q+N E+ SAY Y +MA++   +++ L GFA +     +EEI H      Y+
Sbjct: 4   ERMLKALNDQLNRELYSAYLYFAMAAYF--EDLGLEGFANWMKAQAEEEIGHALRFYNYI 61
Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
             R G++ L  I  P K EW +       A   EK +++ + +L A A +  D +   FL
Sbjct: 62  YDRNGRVELDEIPKPPK-EWESPLKAFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFL 120
Query: 192 EGRYLQEQVD---AIKTLADLLTTVRRTQ--LYLVDRDL 225
           E  ++ EQV+   ++K + D L   + +   L+++D++L
Sbjct: 121 EW-FINEQVEEEASVKKILDKLKFAKDSPQILFMLDKEL 158

>pdb|2X17|0 Chain 0, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus Loaded With Ag(I) Length = 173

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E  +  +N Q+N E+ SAY Y +MA++   +++ L GFA +     +EEI H      Y+
Sbjct: 4   ERMLKALNDQLNRELYSAYLYFAMAAYF--EDLGLEGFANWMKAQAEEEIGHALRFYNYI 61
Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
             R G++ L  I  P K EW +       A   EK +++ + +L A A +  D +   FL
Sbjct: 62  YDRNGRVELDEIPKPPK-EWESPLKAFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFL 120
Query: 192 EGRYLQEQVD---AIKTLADLLTTVRRTQ--LYLVDRDL 225
           E  ++ EQV+   ++K + D L   + +   L+++D++L
Sbjct: 121 EW-FINEQVEEEASVKKILDKLKFAKDSPQILFMLDKEL 158

>pdb|1EUM|A Chain A, Crystal Structure Of The E.Coli Ferritin Ecftna Length = 165

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 85/158 (53%), Gaps = 9/158 (5%)
Query: 73  DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLN 132
           + I+K+N Q+N E+ S+  Y  M+++C+       G A F     +EE+ HM+ L  YL 
Sbjct: 5   EMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFE--GAAAFLRRHAQEEMTHMQRLFDYLT 62
Query: 133 KRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLE 192
             G   R+ ++E+P   E++++++L  E    E+ + +K+ +L   A  + D    +FL+
Sbjct: 63  DTGNLPRINTVESPFA-EYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQ 121
Query: 193 GRYLQEQVD---AIKTLADLLTTVRRT--QLYLVDRDL 225
             Y+ EQ +     K++ D L+   ++   LY +D++L
Sbjct: 122 W-YVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKEL 158

>pdb|3E6R|A Chain A, Crystal Structure Of Apo-Ferritin From Pseudo-Nitzschia Multiseries Length = 168

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E+ +D  N Q+  E  ++  Y+S + +  Q++    G A +      EE EH    + + 
Sbjct: 3   EELLDLFNRQVTQEFTASQVYLSASIWFDQNDWE--GMAAYMLAESAEEREHGLGFVDFA 60
Query: 132 NKRGGQLRLTSIEAP-SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           NKR   + L ++ AP S  EW++ ED+    L +E+     LL L   AS   D  +  F
Sbjct: 61  NKRNIPIELQAVPAPVSCAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAF 120
Query: 191 LEGRYLQE--QVDAIKTLADLLTTVRRTQLYLVDRDLMS 227
           L   +LQ+  + D I ++   +T   RT   L   D++S
Sbjct: 121 LNPFHLQQVNEEDKIGSILAKVTDENRTPGLLRSLDVVS 159

>pdb|3EGM|A Chain A, Structural Basis Of Iron Transport Gating In Helicobacter Pylori Ferritin Length = 181

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 72  EDCIDKINTQINDEIRSAYTYISMASFC---TQDNVALFGFAKFFTHSYKEEIEHMEHLI 128
           +D I  +N Q+N E+ S+  Y+SM+S+C   + D   LF     F H+  EE EH + LI
Sbjct: 18  KDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLF----LFDHA-AEEYEHAKKLI 72
Query: 129 AYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLT 188
            +LN+    ++LTSI AP + ++  +  +  +A   E+ ++E +  +   A +  D    
Sbjct: 73  IFLNENNVPVQLTSISAP-EHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATF 131
Query: 189 DFLEGRYLQEQVDAIKTLADLLTTVRRT-----QLYLVDR 223
           +FL+  Y+ EQ +      D+L  +         LYL D+
Sbjct: 132 NFLQW-YVAEQHEEEVLFKDILDKIELIGNENHGLYLADQ 170

>pdb|1KRQ|A Chain A, Crystal Structure Analysis Of Campylobacter Jejuni Ferritin Length = 167

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           ++ +  +N QIN E+ +A  Y+SM+S+C ++++   G A  F H+  EE +H + LI YL
Sbjct: 4   KEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAG-AFLFAHA-SEESDHAKKLITYL 61
Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
           N+    + L  ++ P +Q + ++ D+  +    E+ + + +  L      H D +  +FL
Sbjct: 62  NETDSHVELQEVKQP-EQNFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFL 120
Query: 192 EGRYLQEQ----------VDAIKTLADLLTTVRRTQLYLVDR 223
           +  Y+ EQ          VD IK + +         LYL D+
Sbjct: 121 QW-YVSEQHEEEALFRGIVDKIKLIGE-----HGNGLYLADQ 156

>pdb|3QZ3|A Chain A, The Crystal Structure Of Ferritin From Vibrio Cholerae O1 Biovar El Tor Str. N16961 Length = 184

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 75  IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR 134
           ++ +N QIN E  S+  Y+  +++C  ++    G A+F      EE +H + L  Y+++ 
Sbjct: 16  VEHLNEQINLEFFSSNLYLQXSAWC--EDKGFDGAAEFLRAHAVEEXQHXQRLFTYVSET 73
Query: 135 GGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGR 194
           G    L +I AP + ++ ++ ++  E    E+++ +++ KL   A    D +  +FL+  
Sbjct: 74  GALPILGAIAAP-RHDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNFLQ-W 131
Query: 195 YLQEQVDAIKTLADLLTTVRRT-----QLYLVDRDLMS 227
           Y+ EQ +  K    +L  +         L+ +D+DL +
Sbjct: 132 YVAEQHEEEKLFKGILDKLELVGEDGKALFFIDKDLAA 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	239
3a68_A	212	Sferh-4, ferritin-4, chloroplastic; 4-helix bundle	2e-63
3vnx_A	204	Ferritin; 4-helix bundle, iron storage, oxidoreduc	3e-63
1rcd_A	173	L ferritin; iron storage; 2.00A {Rana catesbeiana}	2e-62
2cih_A	183	Ferritin heavy chain; apoferritin, ferroxidase, DI	3e-62
3ka8_A	176	Ferritin, middle subunit; iron storage, DIIRON, ir	7e-62
1s3q_A	173	Ferritin; ferroxidase, four helix bundle, iron sto	5e-58
2v2p_A	174	Ferritin light chain; metal transport, iron, haemi	7e-58
3kxu_A	191	Ferritin; iron storage protein, disorder, iron, me	1e-56
3qz3_A	184	Ferritin; structural genomics, the center for stru	2e-56
2jd6_0	174	Ferritin homolog, ferritin; metal transport, iron,	5e-56
1vlg_A	176	Ferritin; TM1128, structural genomics, JCSG, prote	6e-56
3oj5_A	189	Ferritin family protein; ferroxidase, cytosol, oxi	8e-56
1z6o_M	191	Ferritin heavy chain; metal binding protein, iron	2e-55
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	1e-54
3e6s_A	168	Ferritin; iron storage, ferroxidase, oxidoreductas	1e-54
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	1e-52
3bvf_A	181	Ferritin; iron storage, metal-binding, oxidoreduct	1e-52
1z6o_A	212	Ferritin light chain; metal binding protein, iron	8e-43
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	3e-13
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	9e-12
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	5e-11
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	1e-10
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	3e-10
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	3e-10
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	2e-08
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	9e-05

>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A Length = 212

 Score =  196 bits (499), Expect = 2e-63
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 20/202 (9%)

Query: 33  KPCKETKPKSKKSSEPTQSSQHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTY 92
           +P +E K +        Q+S               Q + ++    +N QIN E   +Y Y
Sbjct: 16  EPFEEVKKELDLVPTVPQASLAR------------QKYVDESESAVNEQINVEYNVSYVY 63

Query: 93  ISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP----SK 148
            +M ++  +DNVAL G AKFF  S +EE EH E L+ Y NKRGG+++L SI  P      
Sbjct: 64  HAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDH 123

Query: 149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLAD 208
            +       +  AL +EK  NEKLL LH+ A+++GD  L DF+E  YL EQV+AIK +++
Sbjct: 124 ADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISE 183

Query: 209 LLTTVRRTQ----LYLVDRDLM 226
            +  +RR      ++  D+ L+
Sbjct: 184 YVAQLRRVGKGHGVWHFDQMLL 205

>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa} Length = 204

 Score =  195 bits (497), Expect = 3e-63
 Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 21/202 (10%)

Query: 33  KPCKETKPK-SKKSSEPTQSSQHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYT 91
           +P  E + + S  +  P   S                 +H +C   IN QIN E   +Y 
Sbjct: 10  QPFSEVQGELSTVTQAPVTDSYAR------------VEYHIECEAAINEQINIEYTISYV 57

Query: 92  YISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP----S 147
           Y ++ S+  +DNV L GFAKFF  +  EE EH   L+ Y  KRGG++ L  + AP    +
Sbjct: 58  YHALHSYFARDNVGLPGFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAAPEMEFA 117

Query: 148 KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLA 207
             +       +  AL +EK   +KL  L A A +H DA L DF+EG  L EQVDA+K  A
Sbjct: 118 NDDKGEALYAMELALSLEKLNFQKLQALQAIADKHKDAALCDFVEGGLLSEQVDAVKEHA 177

Query: 208 DLLTTVRRTQ----LYLVDRDL 225
             ++ +RR      +YL+D++L
Sbjct: 178 VYVSQLRRVGKGVGVYLLDQEL 199

>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A Length = 173

 Score =  192 bits (489), Expect = 2e-62
 Identities = 70/169 (41%), Positives = 103/169 (60%), Gaps = 7/169 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QNFH+DC   +N  +N +  S+Y Y+SMAS+  +D+VAL  FAKFF    +EE EH 
Sbjct: 4   QVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E LI Y N+RGG++ L S+E P + +W    + L  AL ++K +N+ LL LHA A+   D
Sbjct: 64  EKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSD 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-------QLYLVDRDLM 226
            ++TDFLE  YL E V+ IK L D +T++++          YL ++  +
Sbjct: 124 PHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSHPGMAEYLFNKHTL 172

>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A Length = 183

 Score =  191 bits (488), Expect = 3e-62
 Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 7/174 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H+D    IN QIN ++ ++Y Y+SM+ +  +D+VAL  FAK+F H   EE EH 
Sbjct: 8   QVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHA 67

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG++ L  I+ P   +W +  + +  ALH+EK +N+ LL+LH  A+   D
Sbjct: 68  EKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKND 127

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-------QLYLVDRDLMSGKFS 231
            +L DF+E  YL EQV AIK L D +T +R+          YL D+  +    +
Sbjct: 128 PHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSDN 181

>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A Length = 176

 Score =  190 bits (485), Expect = 7e-62
 Identities = 67/169 (39%), Positives = 96/169 (56%), Gaps = 7/169 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+H DC   +N  +N E+ ++YTY SM +F  +D+VAL   A+FF     EE EH 
Sbjct: 4   QVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHA 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E  + Y NKRGG++ L  I+ P + EW    + +  AL +EK +N+ LL LH  A+   D
Sbjct: 64  EKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVD 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-------QLYLVDRDLM 226
            +L DFLE  YL+EQV  IK + D +T ++R          YL D+  +
Sbjct: 124 PHLCDFLESEYLEEQVKHIKRIGDFITNLKRLGLPENGMGEYLFDKHSV 172

>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A Length = 173

 Score =  180 bits (460), Expect = 5e-58
 Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 67  LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEH 126
           + +  E  ++ +N QIN EI SAY Y+SMAS+   D++ L GF+ +    ++EE+ H   
Sbjct: 1   MASISEKMVEALNRQINAEIYSAYLYLSMASYF--DSIGLKGFSNWMRVQWQEELMHAMK 58

Query: 127 LIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDAN 186
           +  ++++RGG+++L ++E P   EW++           E  + +++ +L   A Q  D  
Sbjct: 59  MFDFVSERGGRVKLYAVEEP-PSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFA 117

Query: 187 LTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDLMSGKFS 231
             +FL+  Y+ EQV+   +  D++  +R        L  +D++L   +F+
Sbjct: 118 TYNFLQW-YVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKELSLRQFT 166

>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ... Length = 174

 Score =  180 bits (459), Expect = 7e-58
 Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 7/169 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  +  +D+VAL G   FF    +++++  
Sbjct: 3   QIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGA 62

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     ++ PS+ EW T  D +  A+ +EK LN+ LL LHA  S   D
Sbjct: 63  ERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQAD 122

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR-------TQLYLVDRDLM 226
            +L DFLE  +L E+V  IK + D LT ++R          YL +R  +
Sbjct: 123 PHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAGLGEYLFERLTL 171

>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A Length = 191

 Score =  177 bits (451), Expect = 1e-56
 Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 7/171 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  D    +N+ +N  ++++YTY+S+  +  +D+VAL G + FF    +E+ E  
Sbjct: 4   QIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGY 63

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+   N+RGG+     I+ P++ EW    D +  A+ +EK+LN+ LL LHA  S   D
Sbjct: 64  ERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTD 123

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT-------QLYLVDRDLMSG 228
            +L DFLE  +L E+V  IK + D LT + R          YL  +  +S 
Sbjct: 124 PHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLSSKGSLSS 174

>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} Length = 184

 Score =  177 bits (451), Expect = 2e-56
 Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 12/170 (7%)

Query: 64  RQTLQNFH---EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEE 120
               Q F    +  ++ +N QIN E  S+  Y+ M+++C  ++    G A+F      EE
Sbjct: 2   NAMNQEFFMLSQAMVEHLNEQINLEFFSSNLYLQMSAWC--EDKGFDGAAEFLRAHAVEE 59

Query: 121 IEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACAS 180
           ++HM+ L  Y+++ G    L +I AP + ++ ++ ++  E    E+++ +++ KL   A 
Sbjct: 60  MQHMQRLFTYVSETGALPILGAIAAP-RHDFASLGEVFRETYQHEQKITQQINKLAHVAF 118

Query: 181 QHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDL 225
              D +  +FL+  Y+ EQ +  K    +L  +         L+ +D+DL
Sbjct: 119 TSQDYSTFNFLQW-YVAEQHEEEKLFKGILDKLELVGEDGKALFFIDKDL 167

>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0 Length = 174

 Score =  175 bits (447), Expect = 5e-56
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 9/159 (5%)

Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E  +  +N Q+N E+ SAY Y +MA++   +++ L GFA +     +EEI H      Y+
Sbjct: 4   ERMLKALNDQLNRELYSAYLYFAMAAYF--EDLGLEGFANWMKAQAEEEIGHALRFYNYI 61

Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
             R G++ L  I  P  +EW +       A   EK +++ + +L A A +  D +   FL
Sbjct: 62  YDRNGRVELDEIPKP-PKEWESPLKAFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFL 120

Query: 192 EGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDL 225
           E  ++ EQV+   ++  +L  ++  +     L+++D++L
Sbjct: 121 EW-FINEQVEEEASVKKILDKLKFAKDSPQILFMLDKEL 158

>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A* Length = 176

 Score =  175 bits (446), Expect = 6e-56
 Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 15/172 (8%)

Query: 65  QTLQNFH------EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYK 118
           +   + H      E     +N Q+N EI S+Y Y+SMA++   D     GFA +     +
Sbjct: 5   KIHHHHHHMMVISEKVRKALNDQLNREIYSSYLYLSMATYF--DAEGFKGFAHWMKKQAQ 62

Query: 119 EEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHAC 178
           EE+ H      Y+ +RGG++ L +IE P    WN ++D    AL  E+ + + +  +   
Sbjct: 63  EELTHAMKFYEYIYERGGRVELEAIEKP-PSNWNGIKDAFEAALKHEEFVTQSIYNILEL 121

Query: 179 ASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDL 225
           AS+  D     FL+  ++ EQV+    + ++L  + +       ++ +DR L
Sbjct: 122 ASEEKDHATVSFLKW-FVDEQVEEEDQVREILDLLEKANGQMSVIFQLDRYL 172

>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A Length = 189

 Score =  175 bits (446), Expect = 8e-56
 Identities = 34/160 (21%), Positives = 75/160 (46%), Gaps = 6/160 (3%)

Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           +         +  QI++E  +A  Y+++A +   ++  L   AK F     EE  H   L
Sbjct: 5   EGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSED--LPQLAKHFYSQAVEERNHAMML 62

Query: 128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
           + +L  R  ++ +  ++   + +++   + L  AL  E+ + +++ +L A A   GD   
Sbjct: 63  VQHLLDRDLRVEIPGVDTV-RNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLG 121

Query: 188 TDFLEGRYLQEQVDAIKTLADLLTTVRR--TQLYLVDRDL 225
             F++  +LQEQ++ +  +A L+    R    L+ ++  +
Sbjct: 122 EQFMQW-FLQEQIEEVALMATLVRVADRAGANLFELENFV 160

>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1 Length = 191

 Score =  174 bits (443), Expect = 2e-55
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 14/179 (7%)

Query: 64  RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEH 123
            +     H  C + +  QI  E+ ++  Y++M +  ++D V   GFA+ F  +  EE EH
Sbjct: 11  PKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREH 70

Query: 124 MEHLIAYLNKRGGQLRLTS----IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACA 179
              LI YL  RG      S    +  P++  W    + L  AL ME  + + +  +    
Sbjct: 71  AMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKAC 130

Query: 180 ---SQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR-------TQLYLVDRDLMSG 228
              S+  D +L D+L G +L+EQ    + LA   +T+++          ++ D+ L+  
Sbjct: 131 EDDSEFNDYHLVDYLTGDFLEEQYKGQRDLAGKASTLKKLMDRHEALGEFIFDKKLLGI 189

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1 Length = 167

 Score =  171 bits (436), Expect = 1e-54
 Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 9/167 (5%)

Query: 70  FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIA 129
             ++ +  +N QIN E+ +A  Y+SM+S+C +++  L G   F      EE +H + LI 
Sbjct: 2   LSKEVVKLLNEQINKEMYAANLYLSMSSWCYENS--LDGAGAFLFAHASEESDHAKKLIT 59

Query: 130 YLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTD 189
           YLN+    + L  ++ P +Q + ++ D+  +    E+ + + +  L      H D +  +
Sbjct: 60  YLNETDSHVELQEVKQP-EQNFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFN 118

Query: 190 FLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDLMSGKFS 231
           FL+  Y+ EQ +       ++  ++        LYL D+ + +   S
Sbjct: 119 FLQW-YVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKNIALS 164

>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} PDB: 3e6r_A Length = 168

 Score =  171 bits (436), Expect = 1e-54
 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 9/165 (5%)

Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E+ +D  N Q+  E  ++  Y+S + +  Q++    G A +      EE EH    + + 
Sbjct: 3   EELLDLFNRQVTQEFTASQVYLSASIWFDQND--WEGMAAYMLAESAEEREHGLGFVDFA 60

Query: 132 NKRGGQLRLTSIEAP-SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           NKR   + L ++ AP S  EW++ ED+    L +E+     LL L   AS   D  +  F
Sbjct: 61  NKRNIPIELQAVPAPVSCAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAF 120

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDLMSGKF 230
           L   +  +QV+    +  +L  V         L  +D     G  
Sbjct: 121 LNP-FHLQQVNEEDKIGSILAKVTDENRTPGLLRSLDVVSFLGPC 164

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1 Length = 165

 Score =  167 bits (424), Expect = 1e-52
 Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 9/160 (5%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
             + I+K+N Q+N E+ S+  Y  M+++C+       G A F     +EE+ HM+ L  Y
Sbjct: 3   KPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHT--FEGAAAFLRRHAQEEMTHMQRLFDY 60

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           L   G   R+ ++E+P   E++++++L  E    E+ + +K+ +L   A  + D    +F
Sbjct: 61  LTDTGNLPRINTVESP-FAEYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNF 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDL 225
           L+  Y+ EQ +  K    ++  +         LY +D++L
Sbjct: 120 LQW-YVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKEL 158

>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1 Length = 212

 Score =  143 bits (361), Expect = 8e-43
 Identities = 33/178 (18%), Positives = 70/178 (39%), Gaps = 20/178 (11%)

Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
              H +   ++       +  +Y Y+  A++         GF+K F     E       +
Sbjct: 31  YGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDI 90

Query: 128 IAYLNKRGGQLRLTSIEAP-----SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           I ++ KRG ++             +    N   + L +AL  +K+L E+   +H  A+++
Sbjct: 91  IKHVTKRGDKMNFDQHSTMKTERKNYTAENHELEALAKALDTQKELAERAFYIHREATRN 150

Query: 183 G----DANLTDFLEGRYLQEQVDAIKTLADLLTTVRR-----------TQLYLVDRDL 225
                D  +  +LE  ++++  + I+TLA   + +++             LY+ D  L
Sbjct: 151 SQHLHDPEIAQYLEEEFIEDHAEKIRTLAGHTSDLKKFITANNGHDLSLALYVFDEYL 208

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A* Length = 155

 Score = 64.6 bits (157), Expect = 3e-13
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
            +  I  +N  + +E+ +   Y   A     ++  L    K   H   +E++H + LI  
Sbjct: 4   DKIVIQHLNKILGNELIAINQYFLHARMY--EDWGLEKLGKHEYHESIDEMKHADKLIKR 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G   L  +           +++L   L +E+     L    A     GD    + 
Sbjct: 62  ILFLEGLPNLQELGKL--LIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASREL 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
           LE   L+ + D I  L   L  + +   + YL
Sbjct: 120 LE-DILESEEDHIDWLETQLDLIDKIGLENYL 150

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A* Length = 174

 Score = 60.8 bits (147), Expect = 9e-12
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
             D +  +N Q+  E+ +   Y   +     DN      A        +E+ H E +   
Sbjct: 6   DPDVLRLLNEQLTSELTAINQYFLHSKMQ--DNWGFTELAAHTRAESFDEMRHAEEITDR 63

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G      I +   +   T+ +     L +E  +  +L        +  D      
Sbjct: 64  ILLLDGLPNYQRIGSL--RIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVL 121

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
           LE + + ++ + I  L   L  + +   +LY 
Sbjct: 122 LE-KIVADEEEHIDYLETQLELMDKLGEELYS 152

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1 Length = 161

 Score = 58.5 bits (141), Expect = 5e-11
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
               I+ +N  +  E+ +   Y         ++  L   AK       EE+ H + +IA 
Sbjct: 4   DAKVIEFLNAALRSELTAISQYWVHFRLQ--EDWGLAKMAKKSREESIEEMGHADKIIAR 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G   L  ++    +      + L   L  E    +   +     ++ GD    + 
Sbjct: 62  ILFLEGHPNLQKLDPL--RIGEGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNI 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
            E   + ++   +  L   ++   R   Q + 
Sbjct: 120 FE-SLITDEEGHVDFLETQISLYDRLGPQGFA 150

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A Length = 154

 Score = 57.3 bits (138), Expect = 1e-10
 Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 10/147 (6%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
           H + ID +NT +  E+ +   Y   +     ++       +   H  +EE +H + L+  
Sbjct: 4   HPEVIDYLNTLLTGELAARDQYFIHSRMY--EDWGFSKLYERLNHEMEEETQHADALLRR 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G  R+   +           ++L   L +E+ +   L K  A   QH D    D 
Sbjct: 62  ILLLEGTPRMRPDDIHPGTTV---PEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDI 118

Query: 191 LEGRYLQEQ----VDAIKTLADLLTTV 213
           L+   L +        ++    L+  +
Sbjct: 119 LK-AQLADTEEDHAYWLEQQLGLIARM 144

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308} Length = 182

 Score = 57.0 bits (137), Expect = 3e-10
 Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
               I+++N  +  E+ +   Y         ++      AK       EE+ H + LI  
Sbjct: 25  EPKVIERLNEALFLELGAVNQYWLHYRLL--NDWGYTRLAKKEREESIEEMHHADKLIDR 82

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G   L ++     +    V+++L   L  E        +      + GD      
Sbjct: 83  IIFLEGFPNLQTVSPL--RIGQNVKEVLEADLKGEYDARASYKESREICDKLGDYVSKQL 140

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
            +   L ++   I  L   L  + +   + Y 
Sbjct: 141 FD-ELLADEEGHIDFLETQLDLLAKIGGERYG 171

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A* Length = 158

 Score = 56.1 bits (135), Expect = 3e-10
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
               I+ +N  + +E+ +   Y   A      N  L        H   +E++H +  I  
Sbjct: 4   DTKVINYLNKLLGNELVAINQYFLHARMF--KNWGLKRLNDVEYHESIDEMKHADRYIER 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G   L  +   +  E   VE++L   L +E    + L +    A    D    D 
Sbjct: 62  ILFLEGLPNLQDLGKLNIGE--DVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDM 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
           +    L+++   I  L   L  +++   Q YL
Sbjct: 120 MI-EILRDEEGHIDWLETELDLIQKMGLQNYL 150

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} Length = 161

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 6/145 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
               I+ +N  +  E+ +   Y         ++      A        EE+ H + LI  
Sbjct: 4   DAKVIEYLNAALRSELTAVSQYWLHYRLQ--EDWGFGSIAHKSRKESIEEMHHADKLIQR 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +   GG   L  +      +  T+ + L   L  E       ++      +  D      
Sbjct: 62  IIFLGGHPNLQRLNPLRIGQ--TLRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKML 119

Query: 191 LEGRYLQEQ--VDAIKTLADLLTTV 213
            E     E+  +D ++T  DL+ ++
Sbjct: 120 FEELIADEEGHIDYLETQIDLMGSI 144

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A* Length = 179

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 19/145 (13%), Positives = 45/145 (31%), Gaps = 6/145 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
               I+ +N     E+ + + Y++     + D++     A        +E+ H E+    
Sbjct: 9   KAKVIEVLNKARAMELHAIHQYMNQHY--SLDDMDYGELAANMKLIAIDEMRHAENFAER 66

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           + + GG+            +   V  +       E    E   +      + GD      
Sbjct: 67  IKELGGEPTTQKEGKVVTGQ--AVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARL 124

Query: 191 LEGRYLQEQ--VDAIKTLADLLTTV 213
            E    +EQ  +   + +   +  +
Sbjct: 125 FERIIEEEQAHLTYYENIGSHIKNL 149

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 9e-06
 Identities = 37/263 (14%), Positives = 81/263 (30%), Gaps = 69/263 (26%)

Query: 23  STRHEPTKENKPCKETKPKS----------KKSSEPTQSSQHSPDSLG------KTERQT 66
           +T    + ++     T  +           +    P +    +P  L       +    T
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343

Query: 67  LQNFHEDCIDKINTQIN--------DEIRSAYTYISMASFCTQDNV-----ALFGFAKFF 113
             N+     DK+ T I          E R  +  +S+  F    +       L   +  +
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV--F--PPSAHIPTILL---SLIW 396

Query: 114 THSYKEEIEH-MEHLIAY--LNKRG--GQLRLTSIEAPSKQEWNTVEDL---LTEALHME 165
               K ++   +  L  Y  + K+     + + SI    K +      L   + +  ++ 
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP 456

Query: 166 KQL-NEKLLKL------------HACASQHGDA---------NLTDFLEG--RYLQEQVD 201
           K   ++ L+              H    +H +          +   FLE   R+     +
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF-RFLEQKIRHDSTAWN 515

Query: 202 AIKTLADLLTTVRRTQLYLVDRD 224
           A  ++ + L  ++  + Y+ D D
Sbjct: 516 ASGSILNTLQQLKFYKPYICDND 538

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 4e-05
 Identities = 38/250 (15%), Positives = 80/250 (32%), Gaps = 45/250 (18%)

Query: 20  KCESTRHEPTKENKPCKETKPKSKKSSEPTQSSQHSPDSLGKTERQTLQN-FHEDCIDKI 78
            C S         K   +  P     S+ + + +    S+    R+ L++  +E+C+   
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-- 248

Query: 79  NTQINDEIRSAYTYISMASFC-----TQD-NVALFGFAKFFTHSYKEEI-------EHME 125
              +   +++A  + +    C     T+   V  F  A   TH   +         E   
Sbjct: 249 ---VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 126 HLIAYLNKRGGQLR---------LTSIEAPSKQE----WNTVEDLLTEALH--ME---KQ 167
            L+ YL+ R   L            SI A S ++    W+  + +  + L   +E     
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 168 LNEKLLK--LHACASQHGDANLT-DFLEGRYLQEQVDAIKTLADLLTTVRRTQLYLVDRD 224
           L     +      +     A++    L   +       +  + + L   + +   LV++ 
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL--HKYS---LVEKQ 420

Query: 225 LMSGKFSMHG 234
                 S+  
Sbjct: 421 PKESTISIPS 430

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str} Length = 149

 Score = 40.5 bits (95), Expect = 9e-05
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 7/144 (4%)

Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           ++ I+ +N  +  E  +   Y   A+  T   +       FF     +E  H  +L   +
Sbjct: 9   KELIEGLNEDLAGEYSAIIMYNHNAA--TVSGIYRQVLKPFFESEISDEQGHALYLAEKI 66

Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
              GG      +     ++   V ++L  A   E +  ++  K    A+      L   L
Sbjct: 67  KTLGGTPTTIPLRV---KQAEDVREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKL 123

Query: 192 EGRYLQEQ--VDAIKTLADLLTTV 213
           E     E   ++ +  L +    V
Sbjct: 124 EDMIADETNHMEELDRLLNDKAMV 147

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	239
3vnx_A	204	Ferritin; 4-helix bundle, iron storage, oxidoreduc	100.0
3ka8_A	176	Ferritin, middle subunit; iron storage, DIIRON, ir	100.0
3kxu_A	191	Ferritin; iron storage protein, disorder, iron, me	100.0
3a68_A	212	Sferh-4, ferritin-4, chloroplastic; 4-helix bundle	100.0
2cih_A	183	Ferritin heavy chain; apoferritin, ferroxidase, DI	100.0
1rcd_A	173	L ferritin; iron storage; 2.00A {Rana catesbeiana}	100.0
2v2p_A	174	Ferritin light chain; metal transport, iron, haemi	100.0
1z6o_M	191	Ferritin heavy chain; metal binding protein, iron	100.0
3e6s_A	168	Ferritin; iron storage, ferroxidase, oxidoreductas	100.0
1z6o_A	212	Ferritin light chain; metal binding protein, iron	100.0
1s3q_A	173	Ferritin; ferroxidase, four helix bundle, iron sto	100.0
3qz3_A	184	Ferritin; structural genomics, the center for stru	100.0
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	100.0
3uno_A	189	Probable bacterioferritin BFRB; ferroxidase activi	100.0
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	100.0
3bvf_A	181	Ferritin; iron storage, metal-binding, oxidoreduct	100.0
1vlg_A	176	Ferritin; TM1128, structural genomics, JCSG, prote	100.0
2jd6_0	174	Ferritin homolog, ferritin; metal transport, iron,	100.0
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	100.0
3oj5_A	189	Ferritin family protein; ferroxidase, cytosol, oxi	100.0
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	99.96
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	99.96
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	99.96
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	99.96
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	99.96
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	99.96
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	99.96
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	99.95
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	99.95
2vzb_A	170	Putative bacterioferritin-related protein; DPS, DP	99.95
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	99.95
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	99.93
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	99.93
1ji5_A	142	DLP-1; dodecamer, four-helix bundle, metal transpo	99.92
2c41_A	158	DPS family DNA-binding stress response protein; ir	99.92
1n1q_A	149	DPS protein; four-helix bundle, unknown function;	99.91
2vxx_A	192	Starvation induced DNA binding protein; stress res	99.9
2clb_A	188	DPS-like protein; DI-iron carboxylate, hypothetica	99.9
1jig_A	146	DLP-2; dodecamer, four-helix bundle, metal transpo	99.9
2d5k_A	156	DPS, DPS family protein; four helix bundle, metal	99.9
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	99.85
1tjo_A	182	Iron-rich DPSA-homolog protein; ferritin, low-iron	99.82
2fjc_A	156	Antigen TPF1; mini ferritin, iron binding protein,	99.7
2chp_A	153	MRGA, metalloregulation DNA-binding stress protein	99.68
1o9r_A	162	Agrobacterium tumefaciens DPS; iron-binding protei	99.68
2yjk_A	161	AFP, DPS; metal-binding protein, iron uptake, ferr	99.68
2bk6_A	156	Non-heme iron-containing ferritin; DPS (DNA bindin	99.67
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	99.66
2c2u_A	207	DPS, DNA-binding stress response protein; DNA-bind	99.66
2yw6_A	183	DNA protection during starvation protein; DNA-bind	99.64
2z90_A	161	Starvation-inducible DNA-binding protein or FINE t	99.63
2cf7_A	165	DPR; peroxide resistance, DPS-family, ferritin-lik	99.63
2c2j_A	211	DNA-binding stress response protein; DNA-binding p	99.63
2xgw_A	199	Peroxide resistance protein; metal binding protein	99.62
2wlu_A	175	DPS-like peroxide resistance protein; DNA-binding,	99.62
3ak8_A	167	DNA protection during starvation protein; DPS-like	99.59
3kwo_A	152	Putative bacterioferritin; alpha-helix, bacterial	99.57
3iq1_A	159	DPS family protein; csgid, SAD, niaid, metal trans	99.57
4eve_A	164	Neutrophil-activating protein; dodecamer, four-hel	99.55
2pyb_A	151	NAPA, neutrophil activating protein; ferritin, DPS	99.53
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	99.52
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	99.24
2fzf_A	175	Hypothetical protein; structural genomics, southea	99.2
3qhb_A	179	Symerythrin, ORF180; four-helix bundle, carboxylat	98.94
4a25_A	169	DPS, ferritin DPS family protein; metal binding pr	98.85
4etr_A	153	Putative uncharacterized protein; DUF2383, domain	98.7
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	98.61
1zs3_A	182	Lactococcus lactis Mg1363 DPSA; oxidative stress,	98.58
1zuj_A	179	Hypothetical protein llacc01001955; oxidative stre	98.56
3fse_A	365	Two-domain protein containing DJ-1/THIJ/PFPI-like	98.42
1o9i_A	266	Pseudocatalase; oxidoreductase, hexamer, dimangane	98.11
2v8t_A	302	Manganese-containing pseudocatalase; manganese cat	98.07
1jm0_A	50	Protein (four-helix bundle model); alpha-helical b	97.19
2ib0_A	170	Conserved hypothetical alanine rich protein; 4-hel	96.49
2gyq_A	173	YCFI, putative structural protein; structural geno	96.17
2gs4_A	166	Protein YCIF; stress proteins, rubrerythrin, metal	96.16
3ogh_B	171	Protein YCIE; iron-binding, MCSG, four-helix-bundl	96.08
3k6c_A	95	Uncharacterized protein NE0167; structural genomic	95.91
1zpy_A	95	Hypothetical protein NE0167; structural genomics,	95.89
2uw1_A	338	Desaturase, plastid delta4 multifunctional acyl-AC	95.58
1za0_A	275	Possible acyl-[acyl-carrier protein] desaturase D	95.48
3hiu_A	166	Uncharacterized protein; APC40011, XCC3681, xantho	94.8
3hl1_A	317	Ferritin like protein; structural genomics, joint	94.46
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	92.73
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	92.5
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	92.02
2fzf_A	175	Hypothetical protein; structural genomics, southea	91.41
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	91.16
2itb_A	206	TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative	89.85
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	88.68
2e0z_A	345	Virus-like particle; bacteriophage, HK97; 3.60A {P	88.0
2hz8_A	115	De novo designed DIIRON protein; four-helix bundle	87.86
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	87.36
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	86.76
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	86.71
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	86.65
3qhb_A	179	Symerythrin, ORF180; four-helix bundle, carboxylat	86.22
1zpy_A	95	Hypothetical protein NE0167; structural genomics,	85.77
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	85.31
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	82.93
3q4o_A	196	Uncharacterized protein MJ0754; ferritin-like prot	82.88
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	80.9
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	80.73
3fse_A	365	Two-domain protein containing DJ-1/THIJ/PFPI-like	80.57

>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}

Probab=100.00  E-value=3.2e-51  Score=352.68  Aligned_cols=190  Identities=36%  Similarity=0.524  Sum_probs=174.8

Q ss_pred             CCCCcccCccccCccccccCCCCCCCCCCCCCCCC-ccccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Q psy10513         27 EPTKENKPCKETKPKSKKSSEPTQSSQHSPDSLGK-TERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVA  105 (239)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~  105 (239)
                      .||.+|+|+.|.|+....+          |-  ++ ..|++||||+++|+++||+|||.||+|+|+|++||+||++++||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~----------~~--~~~~~s~~rq~~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~   71 (204)
T 3vnx_A            4 VTGMVFQPFSEVQGELSTV----------TQ--APVTDSYARVEYHIECEAAINEQINIEYTISYVYHALHSYFARDNVG   71 (204)
T ss_dssp             ----CCCHHHHTHHHHHHH----------HH--CCTTSCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTC
T ss_pred             CCcceeccHHHHHHHHhcC----------CC--CCCccccceecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence            5899999999999988777          22  23 35799999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10513        106 LFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK----QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQ  181 (239)
Q Consensus       106 l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~----~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~  181 (239)
                      |+||++||+.+|.|||+||++|++||++|||+|.+++|.+|..    .+|++++++|+.||++|+.|++.|++|+++|.+
T Consensus        72 l~g~a~~f~~~s~EE~~HA~kLi~yi~~rGG~~~l~~i~~p~~~~~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~lA~~  151 (204)
T 3vnx_A           72 LPGFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAAPEMEFANDDKGEALYAMELALSLEKLNFQKLQALQAIADK  151 (204)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999975    367889999999999999999999999999999


Q ss_pred             CCChHHHHHhH-HHhHHHHHHHHHHHHHHHHHHhhHH----HHHHHHHhcCCC
Q psy10513        182 HGDANLTDFLE-GRYLQEQVDAIKTLADLLTTVRRTQ----LYLVDRDLMSGK  229 (239)
Q Consensus       182 ~~D~~t~~FLe-~~fL~EQve~i~~L~~~L~~L~~~g----~ylfDk~L~~~k  229 (239)
                      .+|++|++||+ | ||+||+++|++|+++|++|+++|    +|+||++|++++
T Consensus       152 ~~D~~t~~fLe~~-fL~EQve~i~~l~~~l~~l~~~g~~~g~ylfD~~l~~r~  203 (204)
T 3vnx_A          152 HKDAALCDFVEGG-LLSEQVDAVKEHAVYVSQLRRVGKGVGVYLLDQELGEEE  203 (204)
T ss_dssp             TTCHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHC-
T ss_pred             CCChHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCccHHHhcHHhhcCC
Confidence            99999999999 7 99999999999999999999997    999999999875

>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A

Probab=100.00  E-value=3.7e-50  Score=338.33  Aligned_cols=166  Identities=40%  Similarity=0.690  Sum_probs=160.4

Q ss_pred             cccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q psy10513         63 ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS  142 (239)
Q Consensus        63 ~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~  142 (239)
                      .|++||||+++|+++||+|||.||+|+|+|++||+||++++|||+|||+||+.+|.|||+||++|++||++|||+|.+++
T Consensus         2 ~~~~rqn~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~   81 (176)
T 3ka8_A            2 VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQD   81 (176)
T ss_dssp             CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----  217 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----  217 (239)
                      |++|...+|++++++|+.||++|+.|++.|++|+++|.+.+|++|++||+|+||+||+++|++++++|++|+++|     
T Consensus        82 i~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fl~eQve~~~~l~~~l~~l~~~g~~~~~  161 (176)
T 3ka8_A           82 IKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKHIKRIGDFITNLKRLGLPENG  161 (176)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTTTCH
T ss_pred             ccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            999966689999999999999999999999999999999999999999996699999999999999999999987     


Q ss_pred             --HHHHHHHhcCC
Q psy10513        218 --LYLVDRDLMSG  228 (239)
Q Consensus       218 --~ylfDk~L~~~  228 (239)
                        +|+||++++++
T Consensus       162 ~g~ylfD~~~l~~  174 (176)
T 3ka8_A          162 MGEYLFDKHSVKE  174 (176)
T ss_dssp             HHHHHHHHHTCC-
T ss_pred             ccHHHhCHHhhcC
Confidence              79999999865

>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A

Probab=100.00  E-value=4.9e-50  Score=342.13  Aligned_cols=167  Identities=36%  Similarity=0.595  Sum_probs=151.2

Q ss_pred             cccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q psy10513         63 ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS  142 (239)
Q Consensus        63 ~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~  142 (239)
                      .|++||||+++|+++||+|||.||+|+|+|++||+||++++|||+|||+||+.+|.|||+||++|++||++|||+|.+++
T Consensus         2 ~s~~rqn~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l~~   81 (191)
T 3kxu_A            2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQD   81 (191)
T ss_dssp             CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----  217 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----  217 (239)
                      |.+|..++|++++++|+.||++|+.|++.|++|+++|.+++|++|++||+|+||+||+++|++++++|++|+++|     
T Consensus        82 i~~p~~~~~~s~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~~g~~~~g  161 (191)
T 3kxu_A           82 IKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAG  161 (191)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHSCC----
T ss_pred             cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcC
Confidence            999986689999999999999999999999999999999999999999995599999999999999999999986     


Q ss_pred             --HHHHHH-HhcCCC
Q psy10513        218 --LYLVDR-DLMSGK  229 (239)
Q Consensus       218 --~ylfDk-~L~~~k  229 (239)
                        +|+||+ .|+.+|
T Consensus       162 lg~ylfD~~~l~~~~  176 (191)
T 3kxu_A          162 LGEYLSSKGSLSSTT  176 (191)
T ss_dssp             ---------------
T ss_pred             cchHhcCHHHHhCcc
Confidence              799999 776663

>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A

Probab=100.00  E-value=2.2e-48  Score=336.69  Aligned_cols=191  Identities=37%  Similarity=0.545  Sum_probs=173.6

Q ss_pred             CCCCCcccCccccCccccccCCCCCCCCCCCCCCCCccccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Q psy10513         26 HEPTKENKPCKETKPKSKKSSEPTQSSQHSPDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVA  105 (239)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~  105 (239)
                      .-||.+|.||.|.++....+          |  .+.+.|++||||+++|+++||+|||.||+|+|+|++||+||++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~----------~--~~~~~s~~rq~~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~~v~   76 (212)
T 3a68_A            9 ALTGVIFEPFEEVKKELDLV----------P--TVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVA   76 (212)
T ss_dssp             -----CCCHHHHHTTTTTTS----------C--CSTTSCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTC
T ss_pred             CcCceeeecHHHHHHHHhcC----------c--CCCccCcccCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            36899999999988776544          2  23567899999999999999999999999999999999999988889


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10513        106 LFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK----QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQ  181 (239)
Q Consensus       106 l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~----~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~  181 (239)
                      |+||++||+.+|.|||+||++|++||++|||+|.+++|.+|..    .+|++++++|+.+|++|+.|++.|++|+++|.+
T Consensus        77 l~g~a~~f~~~s~EE~~HA~kl~~yi~~rGG~~~l~~i~~p~~~~~~~e~~~~~e~le~aL~~Ek~v~~~l~~l~~~A~~  156 (212)
T 3a68_A           77 LRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATK  156 (212)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCBCCCCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCcCCCCCCcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999964    357799999999999999999999999999999


Q ss_pred             CCChHHHHHhH-HHhHHHHHHHHHHHHHHHHHHhhHH----HHHHHHHhcCCC
Q psy10513        182 HGDANLTDFLE-GRYLQEQVDAIKTLADLLTTVRRTQ----LYLVDRDLMSGK  229 (239)
Q Consensus       182 ~~D~~t~~FLe-~~fL~EQve~i~~L~~~L~~L~~~g----~ylfDk~L~~~k  229 (239)
                      .+|++|++||+ | ||.||++++++|+++|++|+++|    +|+||++|+++.
T Consensus       157 ~~D~~t~~fLe~~-fL~EQve~~~~l~~~l~~l~~~g~~~gl~l~D~~l~~~~  208 (212)
T 3a68_A          157 NGDVQLADFVETE-YLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG  208 (212)
T ss_dssp             TTCHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHTC-
T ss_pred             cCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcCeehHHhHHHhccC
Confidence            99999999999 8 99999999999999999999987    999999998874

>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A

Probab=100.00  E-value=9.3e-48  Score=325.48  Aligned_cols=167  Identities=41%  Similarity=0.683  Sum_probs=159.7

Q ss_pred             ccccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC
Q psy10513         62 TERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT  141 (239)
Q Consensus        62 ~~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~  141 (239)
                      +.|++||||+++|+++||+|||.||+|+|+|++||+||++++|||+||++||+.+|.|||+||++|++||++|||.|.++
T Consensus         5 ~~s~~rq~~~~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~   84 (183)
T 2cih_A            5 STSQVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQ   84 (183)
T ss_dssp             -CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccC
Confidence            45889999999999999999999999999999999999988899999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH----
Q psy10513        142 SIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ----  217 (239)
Q Consensus       142 ~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g----  217 (239)
                      +|++|...+|++++++|+.+|++|+.|++.|++|+++|.+.+|++|++||+|.||.||++++++++++|++|+++|    
T Consensus        85 ~i~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~fl~eq~e~~~~l~~~l~~l~~~g~~~~  164 (183)
T 2cih_A           85 DIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGAPES  164 (183)
T ss_dssp             CCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred             CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            9999977679999999999999999999999999999999999999999993399999999999999999999987    


Q ss_pred             ---HHHHHHHhcCC
Q psy10513        218 ---LYLVDRDLMSG  228 (239)
Q Consensus       218 ---~ylfDk~L~~~  228 (239)
                         +|+||++++++
T Consensus       165 ~lg~~l~D~~ll~~  178 (183)
T 2cih_A          165 GLAEYLFDKHTLGD  178 (183)
T ss_dssp             HHHHHHHHHHTCC-
T ss_pred             cchhheeCHHHhcC
Confidence               59999999875

>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A

Probab=100.00  E-value=2e-47  Score=320.36  Aligned_cols=164  Identities=43%  Similarity=0.742  Sum_probs=157.8

Q ss_pred             cccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q psy10513         63 ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS  142 (239)
Q Consensus        63 ~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~  142 (239)
                      .|++||||+++|+++||+|||.||+|+|+|++||+||++++||++|||+||+.+|.|||+||++|++||++|||.|.+++
T Consensus         2 ~~~~rqn~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~   81 (173)
T 1rcd_A            2 ESQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQS   81 (173)
T ss_dssp             -CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCC
Confidence            47899999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhH-HHhHHHHHHHHHHHHHHHHHHhhHH----
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLE-GRYLQEQVDAIKTLADLLTTVRRTQ----  217 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe-~~fL~EQve~i~~L~~~L~~L~~~g----  217 (239)
                      |++|...+|++++++|+.+|++|+.|++.|++|+++|.+.+|++|++||+ | ||.||++++++++++|++|+++|    
T Consensus        82 i~~p~~~~~~~~~e~le~aL~~E~~v~~~l~~l~~~a~~~~D~~t~~fLe~~-~l~eq~e~~~~l~~~l~~l~~~g~~~~  160 (173)
T 1rcd_A           82 VEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESP-YLSESVETIKKLGDHITSLKKLWSSHP  160 (173)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            99994458999999999999999999999999999999999999999999 8 99999999999999999999987    


Q ss_pred             ---HHHHHHHhcC
Q psy10513        218 ---LYLVDRDLMS  227 (239)
Q Consensus       218 ---~ylfDk~L~~  227 (239)
                         +|+||+++++
T Consensus       161 ~~g~~~~D~~~l~  173 (173)
T 1rcd_A          161 GMAEYLFNKHTLG  173 (173)
T ss_dssp             HHHHHHHHHHTCC
T ss_pred             CcchhhccHHhcC
Confidence               8999999863

>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...

Probab=100.00  E-value=2.2e-47  Score=320.38  Aligned_cols=163  Identities=36%  Similarity=0.630  Sum_probs=156.7

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      |++||||+++|+++||+|||.||+|+|+|++||+||++++|||+|||+||+.+|.|||+||++|++||++|||.|.+++|
T Consensus         2 ~~~~qn~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i   81 (174)
T 2v2p_A            2 SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDL   81 (174)
T ss_dssp             CCSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence            68999999999999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH------
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ------  217 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g------  217 (239)
                      ++|...+|++++++|+.+|++|+.|++.|++|+++|.+.+|++|++||+|+||.||++++++++++|++|+++|      
T Consensus        82 ~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l~~~g~~~~~~  161 (174)
T 2v2p_A           82 QKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAGL  161 (174)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence            99943589999999999999999999999999999999999999999998899999999999999999999987      


Q ss_pred             -HHHHHH-Hhc
Q psy10513        218 -LYLVDR-DLM  226 (239)
Q Consensus       218 -~ylfDk-~L~  226 (239)
                       +|+||+ +|+
T Consensus       162 g~~l~D~~~l~  172 (174)
T 2v2p_A          162 GEYLFERLTLK  172 (174)
T ss_dssp             HHHHHHHHTC-
T ss_pred             eeeeecHHHhC
Confidence             899999 553

>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1

Probab=100.00  E-value=7.8e-46  Score=315.74  Aligned_cols=166  Identities=27%  Similarity=0.479  Sum_probs=159.6

Q ss_pred             cccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc----
Q psy10513         63 ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQL----  138 (239)
Q Consensus        63 ~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v----  138 (239)
                      .+++||+|+++|+++||+|||.||+|+|+|++||+||++++|||+|||+||+.+|.|||+||++|++||++|||.|    
T Consensus        10 ~~~~~~~~~~~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~~   89 (191)
T 1z6o_M           10 IPKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVS   89 (191)
T ss_dssp             CCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCG
T ss_pred             CcHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhh
Confidence            4789999999999999999999999999999999999988899999999999999999999999999999999999    


Q ss_pred             ccCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        139 RLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH---GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       139 ~l~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~---~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      .+++|++|...+|++++++|+.||++|+.|++.|++|+++|.++   +|+++++||+|+||+||+++++++.++|+++.+
T Consensus        90 ~l~~i~~p~~~~~~~~~e~le~aL~~Ek~v~~~i~~l~~~a~~~~D~~d~~~~d~Le~~fl~EQve~~~~l~~~i~~l~k  169 (191)
T 1z6o_M           90 SLLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDYHLVDYLTGDFLEEQYKGQRDLAGKASTLKK  169 (191)
T ss_dssp             GGCCCCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhcCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999766999999999999999999999999999999998   899999999999999999999999999999976


Q ss_pred             HH-------HHHHHHHhcCC
Q psy10513        216 TQ-------LYLVDRDLMSG  228 (239)
Q Consensus       216 ~g-------~ylfDk~L~~~  228 (239)
                      ++       +|+||++|+++
T Consensus       170 ~~~~~~~~g~~lfD~~l~~~  189 (191)
T 1z6o_M          170 LMDRHEALGEFIFDKKLLGI  189 (191)
T ss_dssp             TTTTCHHHHHHHHHHHHTTC
T ss_pred             HcCCCcccchhhhhHHhhcC
Confidence            62       89999999875

>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A

Probab=100.00  E-value=8.5e-45  Score=303.64  Aligned_cols=155  Identities=26%  Similarity=0.386  Sum_probs=146.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC-cc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS-KQ  149 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~-~~  149 (239)
                      +++|+++||+|||.||+|+|+|++||+||++  ++|+||++||+.+|.|||+||++|++||++|||+|.+++|++|. ..
T Consensus         2 ~~~v~~~LN~qin~El~As~~Yl~ma~~f~~--~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~   79 (168)
T 3e6s_A            2 SEELLDLFNRQVTQEFTASQVYLSASIWFDQ--NDWEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCA   79 (168)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccc
Confidence            5789999999999999999999999999995  57999999999999999999999999999999999999999997 35


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHH--
Q psy10513        150 EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVD--  222 (239)
Q Consensus       150 ~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfD--  222 (239)
                      +|++++++|+.||++|+.|++.|++|+++|.+.+|++|++||+| ||.||++++++++++|++|+++|     +|+||  
T Consensus        80 ~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~-fl~eQve~~~~l~~~l~~l~~~g~~~~~l~~~D~~  158 (168)
T 3e6s_A           80 EWSSPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAFLNP-FHLQQVNEEDKIGSILAKVTDENRTPGLLRSLDVV  158 (168)
T ss_dssp             TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcCeeeeeccH
Confidence            89999999999999999999999999999999999999999999 99999999999999999999997     99999  


Q ss_pred             HHhcCC
Q psy10513        223 RDLMSG  228 (239)
Q Consensus       223 k~L~~~  228 (239)
                      ++|+++
T Consensus       159 ~el~~~  164 (168)
T 3e6s_A          159 SFLGPC  164 (168)
T ss_dssp             CC----
T ss_pred             HHHHHH
Confidence            999876

>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1

Probab=100.00  E-value=5.2e-44  Score=309.28  Aligned_cols=163  Identities=20%  Similarity=0.364  Sum_probs=154.8

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      ...+.+.+++|+++||+|||.||+|+|+||+||+||++++|||+|||+||+++|.|||+||++||+||++|||.|.+++|
T Consensus        27 ~~~~~~~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~dd~~l~gfa~~f~~~s~EE~~HA~kli~yi~~rGg~~~l~~i  106 (212)
T 1z6o_A           27 VYGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQH  106 (212)
T ss_dssp             CCTTTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCC
T ss_pred             cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccccc
Confidence            34467889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----ChHHHHHhH-HHhHHHHHHHHHHHHHHHHHH
Q psy10513        144 EAPSKQEWNT-----VEDLLTEALHMEKQLNEKLLKLHACASQHG----DANLTDFLE-GRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       144 ~~p~~~~~~s-----~~eale~AL~~Ek~vt~~l~~L~~lA~~~~----D~~t~~FLe-~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .+|...+|++     ++++|+.||++|+.|++.|++|+++|.+++    |+++++||+ | ||+||++.|++++++|++|
T Consensus       107 ~~p~~~~~~~~~~~~~~e~le~aL~~Ek~vt~~l~~l~~~a~~~~~~~~D~~t~~fLe~~-fleeQve~i~~l~~~l~~L  185 (212)
T 1z6o_A          107 STMKTERKNYTAENHELEALAKALDTQKELAERAFYIHREATRNSQHLHDPEIAQYLEEE-FIEDHAEKIRTLAGHTSDL  185 (212)
T ss_dssp             CCSCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCCHHHHHHHHHH-THHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            9996457887     999999999999999999999999999999    999999999 6 9999999999999999999


Q ss_pred             hhH---------H--HHHHHHHhcC
Q psy10513        214 RRT---------Q--LYLVDRDLMS  227 (239)
Q Consensus       214 ~~~---------g--~ylfDk~L~~  227 (239)
                      +++         |  +|+||++|++
T Consensus       186 ~~~~~~~~~~~~~~g~ylfD~~L~~  210 (212)
T 1z6o_A          186 KKFITANNGHDLSLALYVFDEYLQK  210 (212)
T ss_dssp             HHHHHGGGGTTHHHHHHHHHHHHHH
T ss_pred             HHhcCCcccCCCcchHHHHHHHHHh
Confidence            997         4  8999999974

>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A

Probab=100.00  E-value=2.4e-43  Score=295.69  Aligned_cols=156  Identities=29%  Similarity=0.544  Sum_probs=151.8

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++|+++||+|||.||+|+|+|++||+||+  ++||+|||+||+.+|.|||+||++|++||++|||.|.+++|++|..
T Consensus         3 m~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p~~   80 (173)
T 1s3q_A            3 SISEKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPS   80 (173)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC
Confidence            57899999999999999999999999999999  6899999999999999999999999999999999999999999964


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       +|.+++++|+.+|++|+.+++.|++|+++|.+.+|++|++||+| ||.||++++++++++|++|+++|     +|+||+
T Consensus        81 -~~~~~~e~le~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~fle~-~l~eq~e~~~~l~~~l~~l~~~g~~~~g~~~~D~  158 (173)
T 1s3q_A           81 -EWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQW-YVAEQVEEEASALDIVEKLRLIGEDKRALLFLDK  158 (173)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcchHhHHhH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999997     899999


Q ss_pred             HhcCC
Q psy10513        224 DLMSG  228 (239)
Q Consensus       224 ~L~~~  228 (239)
                      +|+++
T Consensus       159 ~l~~~  163 (173)
T 1s3q_A          159 ELSLR  163 (173)
T ss_dssp             HHTTC
T ss_pred             HHhhc
Confidence            99877

>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1

Probab=100.00  E-value=4e-43  Score=297.41  Aligned_cols=159  Identities=25%  Similarity=0.462  Sum_probs=153.3

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCC
Q psy10513         67 LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP  146 (239)
Q Consensus        67 rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p  146 (239)
                      ..+++++|+++||+|||.||+|+|+|++||+||+  +++|+||++||+.+|.|||+||++|++||++|||.|.+++|++|
T Consensus         8 ~~m~~~~v~~~LN~qin~EL~as~~Yl~~a~~f~--~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~~p   85 (184)
T 3qz3_A            8 FFMLSQAMVEHLNEQINLEFFSSNLYLQMSAWCE--DKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAP   85 (184)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC
T ss_pred             eeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCCc
Confidence            4578999999999999999999999999999999  89999999999999999999999999999999999999999999


Q ss_pred             CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHH
Q psy10513        147 SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLV  221 (239)
Q Consensus       147 ~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylf  221 (239)
                      . .+|.+++++|+.+|++|+.|++.|++|+++|.+.+|++|++||+| ||+||++++++|+++|++|+++|     +|+|
T Consensus        86 ~-~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~-fl~EQve~~~~l~~~l~~l~~~g~~~~~~~~~  163 (184)
T 3qz3_A           86 R-HDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNFLQW-YVAEQHEEEKLFKGILDKLELVGEDGKALFFI  163 (184)
T ss_dssp             C-CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred             c-cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCCcchhHH
Confidence            8 589999999999999999999999999999999999999999998 99999999999999999999986     8999


Q ss_pred             HHHhcCCC
Q psy10513        222 DRDLMSGK  229 (239)
Q Consensus       222 Dk~L~~~k  229 (239)
                      |++|+++.
T Consensus       164 D~~l~~~~  171 (184)
T 3qz3_A          164 DKDLAALA  171 (184)
T ss_dssp             HHHHHHHH
T ss_pred             hHHHhhhh
Confidence            99998753

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1

Probab=100.00  E-value=4.3e-42  Score=285.16  Aligned_cols=156  Identities=27%  Similarity=0.504  Sum_probs=151.3

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++|+++||+||+.|++|+|+|++||+||+  ++|++||++||+.+|.|||+||++|++||++|||.|.+++|++|..
T Consensus         1 m~~~~~~~~LN~~i~~El~A~~~Yl~~a~~~~--~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~   78 (165)
T 1eum_A            1 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA   78 (165)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC
Confidence            47899999999999999999999999999999  6999999999999999999999999999999999999999999986


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       .|+++.++|+.||++|+.+++.|++++++|.+++|+++++||+| ||.||++++++++++|++|+++|     +|+||+
T Consensus        79 -~~~~~~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~fl~~-~l~eq~e~~~~l~~~l~~l~~~g~~~~g~~~~D~  156 (165)
T 1eum_A           79 -EYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQW-YVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDK  156 (165)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCccchhHHhH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999997     899999


Q ss_pred             HhcCC
Q psy10513        224 DLMSG  228 (239)
Q Consensus       224 ~L~~~  228 (239)
                      +|+++
T Consensus       157 ~l~~~  161 (165)
T 1eum_A          157 ELSTL  161 (165)
T ss_dssp             HHHHC
T ss_pred             HHHhh
Confidence            99876

>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A

Probab=100.00  E-value=5.7e-42  Score=291.74  Aligned_cols=154  Identities=21%  Similarity=0.329  Sum_probs=145.7

Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC
Q psy10513         68 QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS  147 (239)
Q Consensus        68 qn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~  147 (239)
                      ++++++|+++||+|||.||+|+|+|++||+||+  +++|+||++||+.+|.|||+||++|++||++|||.|.+++|.+|.
T Consensus         5 ~~~~~~v~~~LN~qi~~El~As~~Yl~~a~~f~--~~~l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p~   82 (189)
T 3uno_A            5 EGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFD--SEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVR   82 (189)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCCC
Confidence            478899999999999999999999999999999  568999999999999999999999999999999999999999996


Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-------HHH
Q psy10513        148 KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-------LYL  220 (239)
Q Consensus       148 ~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-------~yl  220 (239)
                      . +|.+++++|+.+|++|+.|++.|++|+++|.+++|++|++||+| ||+||++++++++++|++|+++|       .|+
T Consensus        83 ~-~~~s~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~-fL~EQve~~~~l~~~l~~l~~~g~~~~~l~~yL  160 (189)
T 3uno_A           83 N-QFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQW-FLQEQIEEVALMATLVRVADRAGANLFELENFV  160 (189)
T ss_dssp             C-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred             c-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence            4 89999999999999999999999999999999999999999998 99999999999999999999998       677


Q ss_pred             HHHHh
Q psy10513        221 VDRDL  225 (239)
Q Consensus       221 fDk~L  225 (239)
                      ||+..
T Consensus       161 ~~~~~  165 (189)
T 3uno_A          161 AREVD  165 (189)
T ss_dssp             HHHSC
T ss_pred             HHHhc
Confidence            77765

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1

Probab=100.00  E-value=4.3e-41  Score=279.79  Aligned_cols=156  Identities=24%  Similarity=0.437  Sum_probs=151.0

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++|+++||+||+.|++|+|+|++||+||+  ++|++||++||+.+|.|||+||++|++||++|||.|.+++|+.|..
T Consensus         1 m~~~~~~~~Ln~~i~~El~A~~~Yl~~a~~~~--~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p~~   78 (167)
T 1krq_A            1 MLSKEVVKLLNEQINKEMYAANLYLSMSSWCY--ENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQ   78 (167)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC
Confidence            46899999999999999999999999999999  5899999999999999999999999999999999999999999964


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       .|+++.++|+.+|++|+.+++.|++++++|.+++|+++++||+| ||.||++++++++++|++|+++|     +|+||+
T Consensus        79 -~~~~~~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~~l~~-~l~Eq~e~~~~l~~~l~~l~~~g~~~~g~~~~D~  156 (167)
T 1krq_A           79 -NFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFLQW-YVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQ  156 (167)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHHHHHCSTTTHHHHHHH
T ss_pred             -CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcchHhHHhH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999997     899999


Q ss_pred             HhcCC
Q psy10513        224 DLMSG  228 (239)
Q Consensus       224 ~L~~~  228 (239)
                      +|+++
T Consensus       157 ~l~~~  161 (167)
T 1krq_A          157 YIKNI  161 (167)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99865

>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*

Probab=100.00  E-value=6.4e-38  Score=262.29  Aligned_cols=157  Identities=28%  Similarity=0.535  Sum_probs=152.3

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      |++++|+++||+||+.|+.|+|+|++||.||+  +++++||++||+.+|.||++||++|++||+.|||.|.+++|+.|..
T Consensus        15 ~~~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~--~~~~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~~   92 (176)
T 1vlg_A           15 VISEKVRKALNDQLNREIYSSYLYLSMATYFD--AEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPS   92 (176)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCC
Confidence            68999999999999999999999999999999  6899999999999999999999999999999999999999999974


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       +|.++.++|+.+|++|+.+++.|++++++|.+++|++|++||+| ||.||++++.+++++|++|+++|     +|+||+
T Consensus        93 -~~~~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eq~ee~~~l~~~l~~l~~~g~~~~g~~~~D~  170 (176)
T 1vlg_A           93 -NWNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKW-FVDEQVEEEDQVREILDLLEKANGQMSVIFQLDR  170 (176)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCccchhhhhH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999997     899999


Q ss_pred             HhcCCC
Q psy10513        224 DLMSGK  229 (239)
Q Consensus       224 ~L~~~k  229 (239)
                      +|+++|
T Consensus       171 ~l~~~~  176 (176)
T 1vlg_A          171 YLGQRE  176 (176)
T ss_dssp             HHTTCC
T ss_pred             HhhcCC
Confidence            998764

>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0

Probab=100.00  E-value=2.6e-35  Score=244.89  Aligned_cols=157  Identities=29%  Similarity=0.532  Sum_probs=150.8

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++|+++||++++.|+.|+++|+.|++||+  +++++|+++||+.+|.||++||++|++||+.|||.|.+..|+.|..
T Consensus         1 m~~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~--~~~~~~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~~   78 (174)
T 2jd6_0            1 MLSERMLKALNDQLNRELYSAYLYFAMAAYFE--DLGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPPK   78 (174)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Confidence            35789999999999999999999999999998  5899999999999999999999999999999999999999999964


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       .|.++.++|+.++++|+.+++.|++++++|.+.+|++|++||+| ||.+|++++.+|+++|++|+++|     +|+||+
T Consensus        79 -~~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~l~eq~e~~~~l~~~l~~l~~~g~~~~g~~~~d~  156 (174)
T 2jd6_0           79 -EWESPLKAFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFLEW-FINEQVEEEASVKKILDKLKFAKDSPQILFMLDK  156 (174)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             -CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCccchhhhhH
Confidence             79999999999999999999999999999999999999999999 99999999999999999999997     999999


Q ss_pred             HhcCCC
Q psy10513        224 DLMSGK  229 (239)
Q Consensus       224 ~L~~~k  229 (239)
                      +|.++.
T Consensus       157 ~l~~~~  162 (174)
T 2jd6_0          157 ELSARA  162 (174)
T ss_dssp             HHTTCC
T ss_pred             HHhhcC
Confidence            998873

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=100.00  E-value=3.1e-35  Score=241.82  Aligned_cols=146  Identities=18%  Similarity=0.236  Sum_probs=141.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||+||+.|+.|+++|++||.||+  ++|++|+++||+.+|.||++||++|++||+.|||.|.+.++.+|.  .
T Consensus         4 ~~kvi~~LN~~l~~El~A~~~Y~~~a~~~~--~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~--~   79 (159)
T 4am5_A            4 DQKVIEYLNRGLRSELTAVSQYWLHYRMLE--DWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLR--I   79 (159)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC--C
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc--c
Confidence            578999999999999999999999999998  899999999999999999999999999999999999999998776  5


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      |.++.++|+.+|++|+.++..|++++++|.+.+|+.|++||+| ||.+|++|+.+|.++|+.|+++|  .|+-
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-il~eEeeH~~~l~~~L~~i~~~G~~~yl~  151 (159)
T 4am5_A           80 GQTVKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEE-LMGDEEHHIDFLETQLDLVSKLGLELYAQ  151 (159)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            9999999999999999999999999999999999999999999 99999999999999999999999  7853

>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A

Probab=100.00  E-value=2.6e-33  Score=236.75  Aligned_cols=157  Identities=22%  Similarity=0.343  Sum_probs=149.1

Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC
Q psy10513         68 QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS  147 (239)
Q Consensus        68 qn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~  147 (239)
                      .+++++|+++||++|+.|+.|+++|+.|++||+  .+|++||++||+.+|.||++||++|++||+.|||.|.+..|+.|.
T Consensus         5 ~m~~~~v~~~LN~~la~El~a~~~Yl~~a~~~~--~~gf~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~   82 (189)
T 3oj5_A            5 EGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFD--SEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVR   82 (189)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCC
Confidence            367889999999999999999999999999998  568999999999999999999999999999999999999999997


Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHHHHh
Q psy10513        148 KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVDRDL  225 (239)
Q Consensus       148 ~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfDk~L  225 (239)
                      . .|.++.++|+.+|++|+.+++.|++++++|.+.+|+.|++||+| ||.+|++++.+|+.+|++|+++|  +|++|++|
T Consensus        83 ~-~~~~~~e~l~~~l~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eqe~~~~~l~~~l~~l~~~g~~l~~~d~~l  160 (189)
T 3oj5_A           83 N-QFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQW-FLQEQIEEVALMATLVRVADRAGANLFELENFV  160 (189)
T ss_dssp             C-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred             C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCchHhHHHHHH
Confidence            4 79999999999999999999999999999999999999999998 99999999999999999999999  99999999


Q ss_pred             cCC
Q psy10513        226 MSG  228 (239)
Q Consensus       226 ~~~  228 (239)
                      .++
T Consensus       161 ~~~  163 (189)
T 3oj5_A          161 ARE  163 (189)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A

Probab=99.96  E-value=1.1e-28  Score=200.17  Aligned_cols=145  Identities=23%  Similarity=0.302  Sum_probs=137.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||++++.|+.|+++|++|+.+|+  ++++++++.||+.+|.+|++||++|++||+.+||.|.+ ++.++.  .
T Consensus         4 ~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~-~~~~~~--~   78 (154)
T 3r2k_A            4 HPEVIDYLNTLLTGELAARDQYFIHSRMYE--DWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM-RPDDIH--P   78 (154)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCCCC--C
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCCCC--C
Confidence            678999999999999999999999999998  78999999999999999999999999999999999999 766443  3


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHH-HHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQE-QVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~E-Qve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      +.++.++|+.++++|+.++..|++++++|.+.+|+.|++||+| |+.+ +.+|+.+|..++..++++|  .|+-
T Consensus        79 ~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~e~ee~h~~~l~~~l~~i~~~g~~~y~~  151 (154)
T 3r2k_A           79 GTTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKA-QLADTEEDHAYWLEQQLGLIARMGLENYLQ  151 (154)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHTHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
Confidence            5589999999999999999999999999999999999999999 9999 9999999999999999999  7764

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=99.96  E-value=1.7e-28  Score=200.19  Aligned_cols=146  Identities=16%  Similarity=0.199  Sum_probs=139.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||++++.|+.|+++|++|+.+|+  ++++++++.||+.+|.+|++||++|++||+.+||.|.+..+..|..  
T Consensus         6 ~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~--   81 (161)
T 3uoi_A            6 DPDVLRLLNEQLTSELTAINQYFLHSKMQD--NWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI--   81 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCC--
Confidence            678999999999999999999999999998  7899999999999999999999999999999999999998888865  


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      ..++.++|+.++++|+.++..|++++++|.+.+|+.|++||+| |+.++.+++.+|..+|..++++|  .|+.
T Consensus        82 ~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~~~eee~h~~~l~~~l~~i~~~g~~~y~~  153 (161)
T 3uoi_A           82 GQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEK-IVADEEEHIDYLETQLELMDKLGEELYSA  153 (161)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            3789999999999999999999999999999999999999999 99999999999999999999999  5643

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=99.96  E-value=1.3e-27  Score=193.55  Aligned_cols=149  Identities=19%  Similarity=0.209  Sum_probs=141.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcc
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQ  149 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~  149 (239)
                      .++++++.||.+++.|+.++++|+.++.+|+  ++++++++.||+.+|.+|++||++|++|++.+||.|.+..+.+|.. 
T Consensus         3 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-   79 (158)
T 2y3q_A            3 GDTKVINYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNI-   79 (158)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-
Confidence            3678999999999999999999999999998  7899999999999999999999999999999999999998888765 


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHHH
Q psy10513        150 EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVDR  223 (239)
Q Consensus       150 ~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfDk  223 (239)
                      . .++.++|+.+++.|+.++..|++++++|.+.+|+.+++||+| |+.+|++++.+|+.+|..|+++|  .|++-+
T Consensus        80 ~-~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l~~~g~~~y~~~~  153 (158)
T 2y3q_A           80 G-EDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIE-ILRDEEGHIDWLETELDLIQKMGLQNYLQAQ  153 (158)
T ss_dssp             C-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHTT
T ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            3 789999999999999999999999999999999999999999 99999999999999999999999  777643

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=99.96  E-value=2.8e-27  Score=196.78  Aligned_cols=148  Identities=11%  Similarity=0.149  Sum_probs=141.7

Q ss_pred             cchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC
Q psy10513         65 QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIE  144 (239)
Q Consensus        65 ~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~  144 (239)
                      -+|++.++++++.||.+++.|+.++++|+.|+.+|.  ++++++++.||+.+|.+|++||++|++|++.+||.|.+..+.
T Consensus         3 ~~~~~~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~   80 (179)
T 1nfv_A            3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLD--DMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEG   80 (179)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSS
T ss_pred             cccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCC
Confidence            369999999999999999999999999999999999  679999999999999999999999999999999999999888


Q ss_pred             CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy10513        145 APSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ  217 (239)
Q Consensus       145 ~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g  217 (239)
                      .|.. . .++.++|+.+++.|+.++..|++++.+|.+.+|+.+++||+| |+.++.+++.+|..+|..|+++|
T Consensus        81 ~~~~-~-~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~-~~~eEe~h~~~l~~~l~~l~~~g  150 (179)
T 1nfv_A           81 KVVT-G-QAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFER-IIEEEQAHLTYYENIGSHIKNLG  150 (179)
T ss_dssp             CCCC-S-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence            7764 3 689999999999999999999999999999999999999999 99999999999999999999999

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=99.96  E-value=1.2e-27  Score=194.30  Aligned_cols=149  Identities=15%  Similarity=0.161  Sum_probs=141.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      ++++++.||.+++.|+.+++.|+.++.+|.  ++++++++.||+.+|.+|++||++|++|++.+||.|.+..+..|.. .
T Consensus         4 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~   80 (161)
T 1jgc_A            4 DAKVIEFLNAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRI-G   80 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C
Confidence            568999999999999999999999999998  7899999999999999999999999999999999999998887764 3


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVDRD  224 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfDk~  224 (239)
                       .++.++|+.+++.|+.++..|++++++|.+.+|+.+++||+| |+.+|++++.+|..+|.+++++|  .|++++-
T Consensus        81 -~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l~~~g~~~yl~~~~  154 (161)
T 1jgc_A           81 -EGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFES-LITDEEGHVDFLETQISLYDRLGPQGFALLNA  154 (161)
T ss_dssp             -SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTC
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHc
Confidence             689999999999999999999999999999999999999999 99999999999999999999999  8877664

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=99.96  E-value=1.8e-27  Score=196.82  Aligned_cols=149  Identities=16%  Similarity=0.186  Sum_probs=143.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      ++++++.||.+++.|+.++++|+.++.+|+  ++++++++.||+.+|.+|++||++|++|++.+||.|.+..|..|..  
T Consensus         6 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~--   81 (174)
T 3qb9_A            6 DPDVLRLLNEQLTSELTAINQYFLHSKMQD--NWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI--   81 (174)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC--
Confidence            578999999999999999999999999998  7899999999999999999999999999999999999999988864  


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVDRD  224 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfDk~  224 (239)
                      |.++.++|+.+++.|+.++..|++++++|.+.+|+.+++||+| |+.++.+++.+|.+++..+.+.|  .|++++.
T Consensus        82 ~~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~-~l~eEe~h~~~l~~~l~~i~~~g~~~yl~~~~  156 (174)
T 3qb9_A           82 GQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEK-IVADEEEHIDYLETQLELMDKLGEELYSAQCV  156 (174)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHh
Confidence            7899999999999999999999999999999999999999999 99999999999999999999998  8988776

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1

Probab=99.96  E-value=1.7e-27  Score=194.46  Aligned_cols=146  Identities=15%  Similarity=0.172  Sum_probs=139.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      ++++++.||++++.|+.|+++|+.|+.+|+  ++++++++.||+.+|.+|++||++|++||+.+||.|.+..+.+|.  .
T Consensus         4 ~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~--~   79 (161)
T 3gvy_A            4 DAKVIEYLNAALRSELTAVSQYWLHYRLQE--DWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLR--I   79 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--C
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCC--C
Confidence            578999999999999999999999999998  789999999999999999999999999999999999998887776  4


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      +.++.++|+.++++|+.++..|++++++|.+.+|+.|++||+| |+.++.+++.+|..++..++++|  .|+.
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~~~eEe~h~~~l~~~l~~i~~~g~~~yl~  151 (161)
T 3gvy_A           80 GQTLRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEE-LIADEEGHIDYLETQIDLMGSIGEQNYGM  151 (161)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence            6899999999999999999999999999999999999999999 99999999999999999999999  7754

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}

Probab=99.95  E-value=2.2e-27  Score=199.31  Aligned_cols=149  Identities=16%  Similarity=0.146  Sum_probs=141.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcc
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQ  149 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~  149 (239)
                      .+++++++||++|+.|+.++++|++++.||+  ++++++++.||+.+|.+|++||++|++||+.|||.|.+..+..|.. 
T Consensus        24 ~~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~~-  100 (182)
T 3fvb_A           24 GEPKVIERLNEALFLELGAVNQYWLHYRLLN--DWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLRI-  100 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCCC-
Confidence            4889999999999999999999999999998  8899999999999999999999999999999999999988887764 


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHHH
Q psy10513        150 EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVDR  223 (239)
Q Consensus       150 ~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfDk  223 (239)
                       ..++.++|+.+++.|+.++..|++++++|.+.+|+.|++||+| |+.++.+++.+|..+|..++++|  .|+--+
T Consensus       101 -~~~~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~-il~eEe~h~~~l~~~l~~i~~~g~~~yl~~~  174 (182)
T 3fvb_A          101 -GQNVKEVLEADLKGEYDARASYKESREICDKLGDYVSKQLFDE-LLADEEGHIDFLETQLDLLAKIGGERYGQLN  174 (182)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHT
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence             3789999999999999999999999999999999999999999 99999999999999999999999  776433

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=99.95  E-value=2.1e-26  Score=185.33  Aligned_cols=146  Identities=21%  Similarity=0.228  Sum_probs=138.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||.+++.|+.+++.|+.++.+++  ++++++++.||+.+|.+|++||++|++|++.+||.|.+..+..|..  
T Consensus         4 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~--   79 (155)
T 2fkz_A            4 DKIVIQHLNKILGNELIAINQYFLHARMYE--DWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLI--   79 (155)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCC--
Confidence            578999999999999999999999999998  7899999999999999999999999999999999999988777754  


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      ..++.++|+.++++|+.++..|++++++|.+.+|+.|++||+| |+.++.+++.+|..++..++++|  .|+-
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~eee~h~~~l~~~l~~i~~~g~~~y~~  151 (155)
T 2fkz_A           80 GEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLED-ILESEEDHIDWLETQLDLIDKIGLENYLQ  151 (155)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            3689999999999999999999999999999999999999999 99999999999999999999998  6653

>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}

Probab=99.95  E-value=1.1e-26  Score=190.38  Aligned_cols=143  Identities=18%  Similarity=0.205  Sum_probs=133.4

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---CCC
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS---IEA  145 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~---I~~  145 (239)
                      +.+++++++||.+++.|+.++++|+.++.+|.  ++++++++.||..+|.+|++||++|++|++.+||.|.+..   +..
T Consensus        13 m~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~   90 (170)
T 2vzb_A           13 LDVKSLIDQLNAALSEEWLAYYQYWVGALVVE--GAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFEL   90 (170)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHh
Confidence            56889999999999999999999999999998  7899999999999999999999999999999999998877   443


Q ss_pred             ------CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy10513        146 ------PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ  217 (239)
Q Consensus       146 ------p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g  217 (239)
                            |. ..|+ +.++|+.++++|+.++..|++++++|.+. |+.|++||+| |+.+|++++.+|+.+|.+++++|
T Consensus        91 ~~~~~~~~-~~~~-~~e~l~~~l~~E~~~~~~~~~~~~~a~~~-D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l~~~g  164 (170)
T 2vzb_A           91 ARCKYDSP-TAFD-SVSLLNQNVSSERCAILRYQEIANFTNGK-DYTTCDIAKH-ILAEEEEHEQDLQDYLTDIARMK  164 (170)
T ss_dssp             CSSCCCCC-CSCB-HHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCC-CCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence                  23 2464 99999999999999999999999999777 9999999998 99999999999999999999998

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=99.95  E-value=9.3e-27  Score=198.12  Aligned_cols=136  Identities=15%  Similarity=0.218  Sum_probs=129.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccccc
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWN  152 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~  152 (239)
                      ++++.||+|++.|++|++.|++||.|++  ..||+|+|+||+.+|.+|+.||+++++||+  ||.|.++.+. |.. .|+
T Consensus         8 ~t~~~Ln~a~~~E~~A~~~Yl~~A~~a~--~~G~~~iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~-p~~-~~~   81 (191)
T 1lko_A            8 RTEKNILTAFAGESQARNRYNYFGGQAK--KDGFVQISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAF-PAG-IIA   81 (191)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCC-CCC-CCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcC-Ccc-ccC
Confidence            6899999999999999999999999999  679999999999999999999999999998  9999999965 542 699


Q ss_pred             cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        153 TVEDLLTEALHME-KQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       153 s~~eale~AL~~E-k~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      |+.+.|+.|+++| ..++..|.+++++|++++|+.+.+||+| |+.+|++|++.+.++|++|+.
T Consensus        82 s~~e~l~~al~~E~~e~t~~y~~~~~~A~eegd~~~~~~f~~-~~~~E~ehe~~~~~~l~~l~~  144 (191)
T 1lko_A           82 DTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFAS-IAVAEEFHEKRFLDFARNIKE  144 (191)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhCcHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999999 9999999999999999999999999999 999999999999999999874

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=99.93  E-value=1.1e-24  Score=176.56  Aligned_cols=131  Identities=11%  Similarity=0.193  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCccccCCCCCCCccc
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK--RGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~--RGG~v~l~~I~~p~~~~  150 (239)
                      ++++.||++++.|+.|+++|++||.||+  ++|++++++||+.+|.+|+.||++|++|++.  +|+ |   .+..|    
T Consensus         8 ~~~~~Ln~a~~~E~~A~~~Y~~~A~~a~--~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~-p---~~~~p----   77 (144)
T 1j30_A            8 KTAENLKQGFIGESMANRRYLYFAKRAD--EEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD-P---ATDKP----   77 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC-T---TTSCB----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-C---CcCCC----
Confidence            5899999999999999999999999999  7899999999999999999999999999999  855 4   23333    


Q ss_pred             cccHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        151 WNTVEDLLTEALHMEKQL-NEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~v-t~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      |+++.+.|+.++++|..+ +..|..++++|.+++|+.+.++|++ ++.+|.+|++++..+|.+|+
T Consensus        78 ~~~~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~-i~~~E~~H~~~~~~~l~~i~  141 (144)
T 1j30_A           78 IGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFET-LARAEKSHAEKFQNVLKQLK  141 (144)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            689999999999999999 8999999999999999999999999 99999999999999999876

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=99.93  E-value=3.1e-24  Score=171.54  Aligned_cols=138  Identities=17%  Similarity=0.171  Sum_probs=128.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcc
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQ  149 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~  149 (239)
                      ..+++++.||.+++.|+.++++|+.++.++.  ++++++++.||..+|.+|++||++|++|++.+||.|.+ .+.++.  
T Consensus         7 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~-~~~~~~--   81 (149)
T 2qqy_A            7 DVKELIEGLNEDLAGEYSAIIMYNHNAATVS--GIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTT-IPLRVK--   81 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCCCC--
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-CCCCCC--
Confidence            4678999999999999999999999999998  78999999999999999999999999999999999988 665554  


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        150 EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       150 ~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .|.++.++|+.+++.|+.++..|++++++|.+.+|+.+++||+| |+.++.+++.+|+.++...
T Consensus        82 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~eee~h~~~l~~~l~~~  144 (149)
T 2qqy_A           82 QAEDVREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLED-MIADETNHMEELDRLLNDK  144 (149)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHC--
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHhccc
Confidence            57899999999999999999999999999999999999999999 9999999999999987653

>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1

Probab=99.92  E-value=9e-24  Score=169.20  Aligned_cols=132  Identities=20%  Similarity=0.229  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC--------CCC
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS--------IEA  145 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~--------I~~  145 (239)
                      ++++||.+++.|+ +.|+|+.++.|+- .+.++++++.||..++.||++||++|++||+.+||.|.+..        |+.
T Consensus         2 ~~~~Ln~~la~e~-~~~~~~~~~hw~v-~g~~f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~   79 (142)
T 1ji5_A            2 VIEVLNKQVADWS-VLFTKLHNFHWYV-KGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQE   79 (142)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHHHHHHHC-CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHHHH-HHHHHHHhhhhcc-cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCC
Confidence            6899999999999 9999999999942 27899999999999999999999999999999999999876        888


Q ss_pred             CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        146 PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       146 p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+. .| ++.++|+.++++|+.++..+++++++|.+.+|+.|.+||+| ||.++.+++.+|+.+|
T Consensus        80 ~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~l~e~ek~~w~l~~~l  141 (142)
T 1ji5_A           80 AAY-GE-TAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLLLG-IYTELEKHAWMLRAFL  141 (142)
T ss_dssp             CCT-TC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            775 57 89999999999999999999999999999999999999999 9999999999999876

>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}

Probab=99.92  E-value=1.6e-23  Score=171.77  Aligned_cols=135  Identities=14%  Similarity=0.157  Sum_probs=128.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      +++++++||.+++.|+.++++|+.|+.|+.  ++++.+++.||..++.|+++||++|++||+.+||.|.++        .
T Consensus         8 ~~~v~~~LN~~La~e~~~~~~y~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s~   85 (158)
T 2c41_A            8 KEQVLTTLKREQANAVVMYLNYKKYHWLTY--GPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVAT   85 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhheE--CcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCC
Confidence            567999999999999999999999999999  889999999999999999999999999999999999987        4


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+.|..  +.++.++|+.++++|+.++..+++++++|.+.+|+.|.+||+| ||.++.+++-+|+.+|
T Consensus        86 i~~~~~--~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~-~l~~~Ek~~w~l~~~l  150 (158)
T 2c41_A           86 VTPSSG--QLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADLYTR-LVQTHQKHRWFLKEFL  150 (158)
T ss_dssp             SCCCCS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            777764  7799999999999999999999999999999999999999999 9999999999988765

>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1

Probab=99.91  E-value=1.3e-22  Score=164.27  Aligned_cols=138  Identities=15%  Similarity=0.158  Sum_probs=128.2

Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC------
Q psy10513         68 QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT------  141 (239)
Q Consensus        68 qn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~------  141 (239)
                      .+.+++++++||.+++.|+.+...|..+..++.  ++++.|++.||..++.+|++||++|++||+.+||.|.++      
T Consensus         3 ~~~~~~v~~~LN~~la~e~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~   80 (149)
T 1n1q_A            3 TSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVN--GPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLE   80 (149)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhccchhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHh
Confidence            456889999999999999888888888888877  889999999999999999999999999999999999987      


Q ss_pred             --CCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        142 --SIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       142 --~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                        .|+.|.. .| ++.++|+.++++|+.++..+++++++|.+.+|+.|.+||+| ||.++.+++.+|+.+|
T Consensus        81 ~s~i~~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~-~l~e~ek~~w~l~~~l  148 (149)
T 1n1q_A           81 EASIKEATG-GE-SAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDA-IEAGLEKHVWMLEAFL  148 (149)
T ss_dssp             HCCSCCCCS-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence              5887765 57 89999999999999999999999999999999999999999 9999999999998875

>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}

Probab=99.90  E-value=1.1e-22  Score=172.07  Aligned_cols=140  Identities=14%  Similarity=0.180  Sum_probs=131.5

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC-------
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT-------  141 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~-------  141 (239)
                      .-.++++++||++++.|+.++++|+.|+.++.  ++++++++.||..++.|+++||++|++||+.+||.|.+.       
T Consensus        24 ~~~~~vi~~LN~~La~e~~a~~~y~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~~~~  101 (192)
T 2vxx_A           24 ATTTPICEGMNRLLASFQALYLQYQKHHFVVE--GAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAAL  101 (192)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence            34678999999999999999999999999998  889999999999999999999999999999999999987       


Q ss_pred             -CCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        142 -SIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       142 -~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                       .|..|.. .|.++.++|+.+++.|+.++..|++++++|.+.+|+.|.+||+| ||.++.+++.+|+.+|..
T Consensus       102 s~i~e~~~-~~~~~~e~l~~~l~~e~~~i~~~~~~i~~a~~~~D~~T~~lL~~-~l~eeEkh~w~L~~~L~~  171 (192)
T 2vxx_A          102 CCFTPEPE-GAFNCRQMLSNDLQAEQAIIGVLRQQATQAESLGDRATAYLYDQ-ILLKTEERAYHIGHFLAN  171 (192)
T ss_dssp             CSSCCCCS-SBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHSS
T ss_pred             CcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHhcc
Confidence             7887653 68899999999999999999999999999999999999999999 999999999999988764

>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}

Probab=99.90  E-value=9.9e-23  Score=172.42  Aligned_cols=136  Identities=18%  Similarity=0.247  Sum_probs=128.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------CC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------TS  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~~  142 (239)
                      +++++++||.+++.|+.+++.|+.++.++.  ++++.+++.||..++.|+++||++|++||+.+||.|..        ..
T Consensus        23 ~~~v~~~LN~~La~e~~~~~~y~~~hw~v~--G~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s~  100 (188)
T 2clb_A           23 IKKLVDKLVKATAAEFTTYYYYTILRMHLT--GMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISA  100 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--HHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcc
Confidence            788999999999999999999999999888  88999999999999999999999999999999999994        47


Q ss_pred             CC-C-CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        143 IE-A-PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       143 I~-~-p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |. . |.. +|.++.++|+.+|++|+.++..|++++++|.+. |+.|.+||+| ||.+|++++.+|..+|.
T Consensus       101 I~~e~~~~-~~~~~~e~l~~~l~~e~~v~~~~~~~i~~A~e~-D~~T~dlL~~-~l~e~ee~~~~l~~~L~  168 (188)
T 2clb_A          101 CSDAYLPE-NWKDPKEILKVLLEAEQCAIRTWKEVCDMTYGK-DPRTYDLAQR-ILQEEIEHEAWFLELLY  168 (188)
T ss_dssp             SCCCCCCT-TTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHH-HHHHHHHHHHHHHHHHS
T ss_pred             CCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            88 6 553 688999999999999999999999999999999 9999999999 99999999999998776

>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1

Probab=99.90  E-value=2.5e-22  Score=161.87  Aligned_cols=135  Identities=16%  Similarity=0.182  Sum_probs=126.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .++++++||.+++.|+.+...|..+..++.  ++++.|++.||..++.+|++||++|++||+.+||.|.++        .
T Consensus         3 ~~~v~~~LN~~la~~~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~   80 (146)
T 1jig_A            3 KTNVVEVLNKQVANWNVLYVKLHNYHWYVT--GPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSS   80 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCc
Confidence            367899999999999999999998888878  889999999999999999999999999999999999987        5


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+.|.. .| ++.++|+.++++|+.++..+++++++|.+.+|+.|.+||+| ||.+..+++.+|+.+|
T Consensus        81 i~~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~-~l~e~ek~~w~l~~~l  145 (146)
T 1jig_A           81 VNEGTS-KE-SAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLA-IHTTLEQHVWMLSAFL  145 (146)
T ss_dssp             SCCCCS-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred             CCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            887765 57 89999999999999999999999999999999999999999 9999999999998765

>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}

Probab=99.90  E-value=4.7e-22  Score=162.90  Aligned_cols=135  Identities=16%  Similarity=0.207  Sum_probs=126.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      +++++++||.+++.|+.+...|..+..++.  ++++.|++.||..++.|+++||++|++||+.+||.|.++        .
T Consensus         5 ~~~v~~~LN~~La~e~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~   82 (156)
T 2d5k_A            5 QQDVVKELNQQVANWTVAYTKLHNFHWYVK--GPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSI   82 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhheeeeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
Confidence            578999999999999999999999888888  889999999999999999999999999999999999987        5


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+.|+. .| ++.++|+.+++.|+.++..|++++++|.+.+|+.|.+||+| ||.+..+++-+|+.+|
T Consensus        83 i~~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~-~l~e~Ek~~w~L~a~l  147 (156)
T 2d5k_A           83 VKEAAK-GY-SAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIG-MQTSVDKHNWMFKSYL  147 (156)
T ss_dssp             SCCCCS-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            887765 57 89999999999999999999999999999999999999999 9999999999998776

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=99.85  E-value=1.5e-20  Score=161.28  Aligned_cols=136  Identities=10%  Similarity=0.084  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccccc
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNT  153 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~s  153 (239)
                      .++.||.+++.|+++++.|+.||.+++  ..|++++|++|+..|.+|+.||.++++++..+||.|.+ .+. |. ..+++
T Consensus        29 T~~nL~~a~~gE~~a~~~Y~~~A~~A~--~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i-~~~-p~-~~~gs  103 (202)
T 1yuz_A           29 TLENLKAAIAGETGAHAKYTAFAKAAR--EQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEK-PTV-AA-PSAYS  103 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-CCC----CCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccC-Cc-cCCCC
Confidence            789999999999999999999999999  56999999999999999999999999999999999999 877 54 25889


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        154 VEDLLTEALHME-KQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       154 ~~eale~AL~~E-k~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      +.+.|+.++++| ..++..|.+++++|++++|..+.+||+| |+.+|.+|++.+..+|++|+.
T Consensus       104 t~enL~~a~~gE~~E~t~my~~~a~~A~eEgd~~~a~~f~~-i~~~E~~H~~~~~~ll~~l~~  165 (202)
T 1yuz_A          104 CDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTR-AKLAESVHAERYLAAYNDIDA  165 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999 9999999999999999999999999999 999999999999999998863

>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A

Probab=99.82  E-value=1e-18  Score=146.81  Aligned_cols=138  Identities=14%  Similarity=0.167  Sum_probs=123.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------C
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------T  141 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~  141 (239)
                      =.+++++.||.++..++.+..+|..++.++.  ++++.++..+|..++.++++||++|++||+.+||.|..        .
T Consensus        26 ~~~~vi~~LN~~La~~~~~~~~~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~~s  103 (182)
T 1tjo_A           26 RAEQCVDALNADLANVYVLYHQLKKHHWNVE--GAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEA  103 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhC
Confidence            3567999999999777777766666555556  88999999999999999999999999999999999987        7


Q ss_pred             CCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        142 SIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       142 ~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      .|+.+.. .+.++.++|+..++.|+.++..+++++++|.+.+|+.|.+||++ ||.++.+++-+|+.+|.
T Consensus       104 ~i~e~~~-~~~~~~e~l~~~l~~e~~~i~~~r~~i~~a~e~~D~~T~dll~~-~l~~~Ek~~w~L~a~l~  171 (182)
T 1tjo_A          104 SVDVEDE-DVYDIRTSLANDMAIYGDIIEATREHTELAENLGDHATAHMLRE-GLIELEDDAHHIEHYLE  171 (182)
T ss_dssp             CSCCCCS-SBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHTS
T ss_pred             CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCCHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence            7787664 57799999999999999999999999999999999999999999 99999999999987664

>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1

Probab=99.70  E-value=2.4e-15  Score=123.32  Aligned_cols=136  Identities=14%  Similarity=0.119  Sum_probs=124.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .+++++.||..+..|+.+.++|..++-++.  ++++..+..+|..++.++++||..|+++|+..||.|..+        .
T Consensus        11 ~~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~   88 (156)
T 2fjc_A           11 IAAICEQLRQHVADLGVLYIKLHNYHWHIY--GIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSG   88 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhhCC
Confidence            577999999999999999999999988888  899999999999999999999999999999999999763        3


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+.... .+.++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|
T Consensus        89 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll~~-il~~~Ek~~w~L~a~l  154 (156)
T 2fjc_A           89 IAEETE-KEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITD-ILRTLGKAIWMLGATL  154 (156)
T ss_dssp             SCCCCC-CSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            554332 44589999999999999999999999999999999999999998 9999999999998876

>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}

Probab=99.68  E-value=4.9e-15  Score=121.08  Aligned_cols=135  Identities=18%  Similarity=0.217  Sum_probs=122.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .+++++.||.++..|+.+..+|..++-++.  ++++..+..+|.+++.++++||..++++|+..||.|..+        .
T Consensus        10 ~~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~   87 (153)
T 2chp_A           10 QTLVENSLNTQLSNWFLLYSKLHRFHWYVK--GPHFFTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHAS   87 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCC
Confidence            357899999999999999999998777777  899999999999999999999999999999999999864        3


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+.... .+ ++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|
T Consensus        88 i~e~~~-~~-~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll~~-il~~~Ek~~w~L~a~l  152 (153)
T 2chp_A           88 ITDGGN-ET-SASEMVQALVNDYKQISSESKFVIGLAEENQDNATADLFVG-LIEEVEKQVWMLSSYL  152 (153)
T ss_dssp             SCSCCC-CC-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred             CCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            454443 34 89999999999999999999999999999999999999998 9999999999998765

>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*

Probab=99.68  E-value=4.1e-15  Score=122.54  Aligned_cols=137  Identities=11%  Similarity=0.099  Sum_probs=124.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .+++++.||..+..|+.+..+|..++-++.  ++++..+..+|..++.++++||..|+++|+..||.|..+        .
T Consensus        15 ~~~vi~~Ln~~La~~~~l~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~   92 (162)
T 1o9r_A           15 KSTVIGILNESLASVIDLALVTKQAHWNLK--GPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTK   92 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCC
Confidence            567999999999999999999999888888  889999999999999999999999999999999999876        5


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |+.... .+.++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|.
T Consensus        93 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll~~-il~~~Ek~~w~L~a~l~  159 (162)
T 1o9r_A           93 LKAYPT-DIYKIHDHLDALIERYGEVANMIRKAIDDSDEAGDPTTADIFTA-ASRDLDKSLWFLEAHVQ  159 (162)
T ss_dssp             SCCCCS-SCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHTTS
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            554332 34579999999999999999999999999999999999999998 99999999999987653

>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A

Probab=99.68  E-value=4.5e-15  Score=122.34  Aligned_cols=137  Identities=6%  Similarity=-0.088  Sum_probs=124.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC-------
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS-------  142 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~-------  142 (239)
                      =.+++++.||.++..|+.+.++|..++-++.  ++++..+..+|.+++.++++||..++++|+..||.|..+.       
T Consensus        17 ~~~~vi~~Ln~~La~~~~l~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s   94 (161)
T 2yjk_A           17 VAAAAAQFLTPVVHKMQALVVNGKQAHWNVR--GSNFIAIHELLDSVVAHAQDYADTAAERIVALGLPIDSRVSTMAEKT   94 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhheeeE--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhc
Confidence            3567999999999999999999998887777  8999999999999999999999999999999999998744       


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |+..+. .+.++.++++..++.|..+...+++++ +|.+.+|+.|.++|.. +|.+..+++-+|+.+|.
T Consensus        95 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i-~a~~~~D~~T~dll~~-il~~~Ek~~w~L~a~l~  160 (161)
T 2yjk_A           95 STAVPA-GFAQWQDEIKAIVSDIDAALVDLQAAI-DGLDEVDLTSQDVAIE-IKRGVDKDRWFLLAHLA  160 (161)
T ss_dssp             CCCSCS-SCEEHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTCHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred             cccCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHH-HhcccCCHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            655442 344799999999999999999999999 9999999999999998 99999999999998775

>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A

Probab=99.67  E-value=3.4e-15  Score=122.32  Aligned_cols=136  Identities=17%  Similarity=0.168  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------CC
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------SI  143 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~I  143 (239)
                      +++++.||..+..++.+.++|..++-++.  ++++..+..+|.+++.++++||..++++|+..||.|..+        .|
T Consensus         7 ~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l   84 (156)
T 2bk6_A            7 VDTKEFLNHQVANLNVFTVKIHQIGWYMR--GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASV   84 (156)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchheE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCC
Confidence            46899999999999999999999888888  899999999999999999999999999999999999874        36


Q ss_pred             CCCCccccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        144 EAPSKQEWN-TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       144 ~~p~~~~~~-s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      +.... .+. ++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|.
T Consensus        85 ~e~~~-~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll~~-il~~~Ek~~w~L~a~l~  151 (156)
T 2bk6_A           85 EEAPY-TKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIA-FKASIDKHIWMFKAFLG  151 (156)
T ss_dssp             CCCCC-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHTT
T ss_pred             CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCCHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            65443 343 79999999999999999999999999999999999999998 99999999999988764

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=99.66  E-value=3.9e-15  Score=124.45  Aligned_cols=124  Identities=13%  Similarity=0.091  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccc
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEW  151 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~  151 (239)
                      ...++.||..++-|++|.+.|+.||.+++  .+|++.+|++|+..|.+|++||.+++++|   ||              .
T Consensus         5 ~~T~~nL~~afagEs~A~~~Y~~~A~~A~--~eG~~~iA~~F~~~A~~E~~HA~~~~~~L---~~--------------i   65 (170)
T 3pwf_A            5 TMTKKFLEEAFAGESMAHMRYLIFAEKAE--QEGFPNIAKLFRAIAYAEFVHAKNHFIAL---GK--------------L   65 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHT---TC--------------C
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--------------C
Confidence            46789999999999999999999999999  67999999999999999999999999995   44              2


Q ss_pred             ccHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        152 NTVEDLLTEALHMEKQ-LNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~-vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      ++..+.|+.|++.|.. .+..|.+++++|++++|..+.+++++ ++..+..|.+++..+|.+|+.
T Consensus        66 ~~t~enL~~a~~gE~~e~~~mY~~~a~~A~eeg~~~~a~~f~~-i~~~E~~H~~~~~~~l~~l~~  129 (170)
T 3pwf_A           66 GKTPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHY-ALEAEKIHAELYRKAKEKAEK  129 (170)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTT
T ss_pred             CChHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            4579999999999998 59999999999999999999999999 999999999999999999863

>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A

Probab=99.66  E-value=8.5e-15  Score=125.89  Aligned_cols=137  Identities=8%  Similarity=0.098  Sum_probs=123.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .+++++.||.++..|+.++++|..+.-++.  ++++..+..+|..++.++++||+.|+++|+.+||.|...        .
T Consensus        58 ~~~vi~~LN~~LAde~~l~~qy~~~HWnv~--G~~F~~LHe~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~  135 (207)
T 2c2u_A           58 FQTVAETLQRNLATTISLYLKFKKYHWDIR--GRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYST  135 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCC
Confidence            346899999999999999999998877777  899999999999999999999999999999999999864        3


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |+.... .+.++.++|+..++.|..+...+++++.+|.+.+|+.|.++|.. +|.+..+++-+|+.+|.
T Consensus       136 I~e~~~-g~~~~~emL~~ll~~e~~~i~~~re~i~~aee~~D~~T~dLl~~-il~~~EkhiW~L~a~L~  202 (207)
T 2c2u_A          136 VQVPQE-TVRDARTQVADLVQDLSRVGKGYRDDSQACDEANDPVTADMYNG-YAATIDKIRWMLQAIMD  202 (207)
T ss_dssp             SCCCSS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHC
T ss_pred             CCCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence            554432 34589999999999999999999999999999999999999998 99999999999998764

>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A

Probab=99.64  E-value=1.9e-14  Score=121.17  Aligned_cols=136  Identities=14%  Similarity=0.012  Sum_probs=124.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .+++++.||..+..|+.+..+|..+.-++.  ++++..+..+|.+++.++++|+..|+++|+.+||.|..+        .
T Consensus        14 ~~~vi~~LN~~LA~~~~l~~q~~~~hW~v~--G~~F~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~   91 (183)
T 2yw6_A           14 ASDVADLLQKQLSTYNDLHLTLKHVHWNVV--GPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRT   91 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCC
Confidence            567999999999999999999998888887  899999999999999999999999999999999999873        5


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |+.... .+.++.++++..++.|..+...+++++++|.+. |+.|.++|.. +|.+..+++-+|+.+|.
T Consensus        92 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~~ae~~-D~~T~dll~~-il~~~Ek~~w~L~a~L~  157 (183)
T 2yw6_A           92 WDDYSV-ERDTVQAHLAALDLVYNGVIEDTRKSIEKLEDL-DLVSQDLLIA-HAGELEKFQWFVRAHLE  157 (183)
T ss_dssp             SCCCCC-CSEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHH-HHHHHHHHHHHHHHHHC
T ss_pred             CCccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            665433 445899999999999999999999999999999 9999999998 99999999999998775

>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}

Probab=99.63  E-value=1.6e-14  Score=119.07  Aligned_cols=136  Identities=7%  Similarity=-0.014  Sum_probs=122.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .+++++.||.++..|+.++..|..+.-+..  +.++..+..+|.+++.++++||..|+++|+..||.|..+        .
T Consensus        16 ~~~vi~~Ln~~La~~~~l~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~   93 (161)
T 2z90_A           16 TPEFGGNLQKVLVDLIELSLQGKQAHWNVV--GSNFRDLHLQLDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTT   93 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCC
Confidence            567999999999999999999977666666  789999999999999999999999999999999999875        4


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |...+. .+.++.++++..++.|..+...+++++++|.+. |+.|.++|.. +|.+..+++-+|+.+|.
T Consensus        94 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~-D~~T~dll~~-il~~~Ek~~w~L~a~l~  159 (161)
T 2z90_A           94 LPEFPA-FERSTADVVDLITTRINATVDTIRRVHDAVDAE-DPSTADLLHG-LIDGLEKQAWLIRSENR  159 (161)
T ss_dssp             SCCCCS-SCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHH-HHHHHHHHHHHHHTTTC
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            665442 466899999999999999999999999999999 9999999998 99999999999987653

>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*

Probab=99.63  E-value=2.2e-14  Score=118.81  Aligned_cols=137  Identities=14%  Similarity=0.097  Sum_probs=120.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------S  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------~  142 (239)
                      .+++++.||.++..++.++.+|..+.-+..  +.++..+..+|.+++.++++||..|+++|+.+||.|..+        .
T Consensus        15 ~~~vi~~LN~~La~~~~l~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~   92 (165)
T 2cf7_A           15 LADSKAVLNQAVADLSVAHSILHQVHWYMR--GRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQ   92 (165)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
Confidence            356889999999999999999977666666  789999999999999999999999999999999999864        3


Q ss_pred             CCCCCcccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEW-NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       143 I~~p~~~~~-~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      |+.... .+ .++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|.
T Consensus        93 i~e~~~-~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll~~-il~~~Ek~~w~L~a~L~  160 (165)
T 2cf7_A           93 LKEVLG-DYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNV-AKASIEKHIWMLQAELG  160 (165)
T ss_dssp             CCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHTT
T ss_pred             CCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            454332 34 589999999999999999999999999999999999999998 99999999999998764

>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A

Probab=99.63  E-value=2e-14  Score=123.99  Aligned_cols=152  Identities=5%  Similarity=0.006  Sum_probs=123.4

Q ss_pred             CCCCCCCccccc--hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         55 SPDSLGKTERQT--LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLN  132 (239)
Q Consensus        55 ~~~~~~~~~s~~--rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~  132 (239)
                      ||-..|......  ...=.+++++.||.++..|+.+..+|..++-++.  ++++..+..+|.+++.++++||+.|+++|+
T Consensus        27 ~~~~~g~~~~~~~l~~~~~~~vi~~LN~~LAde~~l~~q~~~~HWnv~--G~~F~~LHe~fee~~~e~~~haD~lAERIl  104 (211)
T 2c2j_A           27 SPLPYNRATTLPAAGTEDLKKSVQALQNTLTELQALQLQTKQAHWNVS--GTLWYTLHELLQDHYEGISKFADDVAERQL  104 (211)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455555544322  1123467999999999999999999998888887  899999999999999999999999999999


Q ss_pred             HcCCccccC--------CCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHH
Q psy10513        133 KRGGQLRLT--------SIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIK  204 (239)
Q Consensus       133 ~RGG~v~l~--------~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~  204 (239)
                      .+||.|...        .|+.... .+.++.++++..++.|..+...+++++++|.+. |+.|.++|.. +|.+..+++-
T Consensus       105 ~LGG~P~~t~~~~~~~s~i~e~~~-g~~~~~emL~~ll~~e~~~i~~~re~i~~aee~-D~~T~dLl~~-il~~~EkhiW  181 (211)
T 2c2j_A          105 SVGASSDGRAITIVAASRLPEIPG-GFLDDAQVIQFFTYQYETVGQRIHQRVGDVEKV-DPTTANLLQE-VEHIIEKYQW  181 (211)
T ss_dssp             HTTCCCCCCHHHHHHTCCSCCCCC-SCEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHH-HHHHHHHHHH
T ss_pred             HcCCCCCCCHHHHHHhCCCcccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHHHH-HHHHHHHHHH
Confidence            999999863        4554432 345899999999999999999999999999999 9999999998 9999999998


Q ss_pred             HHHHHHH
Q psy10513        205 TLADLLT  211 (239)
Q Consensus       205 ~L~~~L~  211 (239)
                      +|+.+|.
T Consensus       182 ~L~a~L~  188 (211)
T 2c2j_A          182 QMRAFLQ  188 (211)
T ss_dssp             HHHGGGC
T ss_pred             HHHHHhc
Confidence            8886543

>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}

Probab=99.62  E-value=1.3e-14  Score=124.00  Aligned_cols=142  Identities=13%  Similarity=0.083  Sum_probs=125.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------  141 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------  141 (239)
                      =.+++++.||.++..|+.++..|..+.-+..  +.++..+..+|.+++.++++||..|+++|+.+||.|..+        
T Consensus        40 ~~~~vi~~LN~~LAde~~l~~k~~~~HWnV~--G~~F~~LH~~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s  117 (199)
T 2xgw_A           40 KNEKTKAVLNQAVADLSVAASIVHQVHWYMR--GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHS  117 (199)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC
Confidence            3568999999999999999999977666666  789999999999999999999999999999999999864        


Q ss_pred             CCCCCCccccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        142 SIEAPSKQEWN-TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       142 ~I~~p~~~~~~-s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      .|+.... .+. ++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|..+.+
T Consensus       118 ~i~e~~~-g~~~~~~emL~~ll~~e~~~i~~~re~i~~aee~~D~~T~dll~~-il~~~Ekh~w~L~a~L~~~~~  190 (199)
T 2xgw_A          118 KLDEAKG-TYDKTVAQHLARLVEVYLYLSSLYQVGLDITDEEGDAGTNDLFTA-AKTEAEKTIWMLQAERGQGPA  190 (199)
T ss_dssp             SCCCCCC-CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCcCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHH
Confidence            4554443 343 89999999999999999999999999999999999999998 999999999999998876544

>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A

Probab=99.62  E-value=3.7e-14  Score=118.61  Aligned_cols=139  Identities=14%  Similarity=0.099  Sum_probs=123.6

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC-------
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT-------  141 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~-------  141 (239)
                      .=.+++++.||.++..++.++..|..+.-+..  +.++..+..+|.+++.++++||..|+++|+..||.|..+       
T Consensus        23 ~~~~~vi~~LN~~LA~~~~l~~k~~~~HWnv~--G~~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~  100 (175)
T 2wlu_A           23 SKNEKTKAVLNQAVADLSVAASIVHQVHWYMR--GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKH  100 (175)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHh
Confidence            34678999999999999999999977666666  789999999999999999999999999999999999864       


Q ss_pred             -CCCCCCccccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        142 -SIEAPSKQEWN-TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       142 -~I~~p~~~~~~-s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                       .|+.... .+. ++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|.
T Consensus       101 s~i~e~~~-~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ae~~~D~~T~dll~~-il~~~Ek~~w~L~a~L~  170 (175)
T 2wlu_A          101 SKLDEAKG-TYDKTVAQHLARLVEVYLYLSSLYQVGLDITDEEGDAGTNDLFTA-AKTEAEKTIWMLQAERG  170 (175)
T ss_dssp             CSCCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHhh
Confidence             4554433 333 89999999999999999999999999999999999999998 99999999999998764

>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*

Probab=99.59  E-value=8e-14  Score=115.57  Aligned_cols=134  Identities=11%  Similarity=0.081  Sum_probs=119.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--------
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--------  141 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--------  141 (239)
                      -.+++++.||.++..|+.+...|..+.-+..  ++++..+..+|.+++.++++||..|+++|+..||.|..+        
T Consensus        25 ~~~~vi~~Ln~~LA~~~~l~~k~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s  102 (167)
T 3ak8_A           25 DKKATVELLNRQVIQFIDLSLITKQAHWNMR--GANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKT  102 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhheeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC
Confidence            3567999999999999999999987766665  899999999999999999999999999999999999874        


Q ss_pred             CCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        142 SIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       142 ~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      .|...+. .+.++.++++..++.|..+...+++++++|.   |+.|.++|.. +|.+..+++-+|+.+|
T Consensus       103 ~i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~---D~~T~dll~~-il~~~Ek~~w~L~a~L  166 (167)
T 3ak8_A          103 PLKSYPL-DIHNVQDHLKELADRYAVVANDVRKAIGEAK---DEDTADIFTA-ASRDLDKFLWFIESNI  166 (167)
T ss_dssp             CSCCCCS-SCCBHHHHHHHHHHHHHHHHHHHHHHHHHCC---SHHHHHHHHH-HHHHHHHHHHHHHHTC
T ss_pred             CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC---CHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            5665443 4668999999999999999999999999986   9999999998 9999999999888654

>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0

Probab=99.57  E-value=3.2e-13  Score=110.16  Aligned_cols=135  Identities=11%  Similarity=0.117  Sum_probs=122.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------CCCC
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------TSIE  144 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~~I~  144 (239)
                      ++.+.||..+..++..+..|..+.-+..  +.++..+..+|..++.++++|+..|+++|+..||.|..        ..|+
T Consensus         5 ~~~~~Ln~~LAd~~~l~~k~~~~HWnv~--G~~F~~lH~~~ee~~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~   82 (152)
T 3kwo_A            5 SVTKQLLQMQADAHHLWVKFHNYHWNVK--GLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSP   82 (152)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHBC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhheeeE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCC
Confidence            5789999999999999999998777776  78999999999999999999999999999999999875        5566


Q ss_pred             CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        145 APSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       145 ~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      .... .+.++.++++..++.+..+...+++++.+|.+.+|+.|.++|.. ++.+..+++-+|+.+|.
T Consensus        83 e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll~~-~l~~~Ek~~w~L~a~l~  147 (152)
T 3kwo_A           83 KVAK-DCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQE-NIAKYEKSLWMIGATLQ  147 (152)
T ss_dssp             CCCC-SCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHS
T ss_pred             CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence            5443 34579999999999999999999999999999999999999998 99999999999988774

>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}

Probab=99.57  E-value=3.5e-13  Score=110.69  Aligned_cols=135  Identities=11%  Similarity=0.092  Sum_probs=120.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------CC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------TS  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~~  142 (239)
                      .+++.+.||..+..++.++.+|..+.-+..  +.++..+..+|.+++.++++|+..|+++|+..||.|..        ..
T Consensus        16 ~~~v~~~Ln~~LAd~~~l~~k~~~~HWnv~--G~~F~~lH~~~ee~~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~   93 (159)
T 3iq1_A           16 SQKLANALNNLLANYQVFYMNTRGYHWNIQ--GKEFFELHAKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAAQ   93 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhheeeE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCC
Confidence            467899999999999999999988744444  78999999999999999999999999999999999875        33


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+...  .+.++.++++..++.+..+...+++++++|.+.+|+.|.++|.. ++.+..+++-+|+.+|
T Consensus        94 i~e~~--~~~~~~eml~~ll~~~~~~i~~~r~~i~~ae~~~D~~T~dll~~-~l~~~Ek~~WmL~a~l  158 (159)
T 3iq1_A           94 IKEHT--DSIDGRSSMQGLVDGFSILLHQQRDILELAGETGDEGTSALMSD-YIREQEKLVWMLNAWL  158 (159)
T ss_dssp             SCCCC--CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CCccC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            55543  35589999999999999999999999999999999999999998 9999999998888765

>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A

Probab=99.55  E-value=3.6e-13  Score=111.54  Aligned_cols=136  Identities=18%  Similarity=0.201  Sum_probs=119.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------CC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------TS  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~~  142 (239)
                      .+++++.||..+..++.+..+|..+.-+..  +.++..+..+|.++++++++|+..|+++|+..||.|..        ..
T Consensus        20 ~~~v~~~Ln~~LAd~~~l~~k~~~~HWnv~--G~~F~~lH~~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~   97 (164)
T 4eve_A           20 HMKTFEILKHLQADAIVLFMKVHNFHWNVK--GTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTR   97 (164)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcC
Confidence            345899999999999999999988744444  78999999999999999999999999999999999875        44


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+.... .+-++.++++..++.+..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|
T Consensus        98 i~e~~~-~~~~~~eml~~ll~~~~~~i~~~r~~i~~aee~~D~~T~dll~~-il~~~Ek~~WmL~a~l  163 (164)
T 4eve_A           98 VKEETK-TSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADD-QLAKLQKSIWMLQAHL  163 (164)
T ss_dssp             SCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            555443 33379999999999999999999999999999999999999998 9999999998888765

>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}

Probab=99.53  E-value=1.8e-14  Score=117.45  Aligned_cols=135  Identities=8%  Similarity=0.028  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC--------C
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS--------I  143 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~--------I  143 (239)
                      +++++.||..+..++.++..|..+.-+..  +.++..+..+|.+++.++++||..|+++|+..||.|..+.        |
T Consensus         4 ~~vi~~Ln~~La~~~~~~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~Lgg~P~~~~~~~~~~s~l   81 (151)
T 2pyb_A            4 DAIQLKLQELLASLHIFYSNLRGIHWNIK--DTNFFVIHKKTQKLYEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSFI   81 (151)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CSSTHHHHHHHHHHHTTTHHHHHHHHHHHHHHTCCCCCCSTTTTTTCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccccccC--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
Confidence            46899999999999999999977666666  7899999999999999999999999999999999998743        3


Q ss_pred             CCCCccccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        144 EAPSKQEWN-TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       144 ~~p~~~~~~-s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      +.... .+. ++.++++..++.|..+...+++++++|.+.+|+.|.++|.. +|.+..+++-+|+.+|
T Consensus        82 ~e~~~-~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll~~-il~~~Ek~~w~L~a~l  147 (151)
T 2pyb_A           82 KELDI-ESTSNFLPSMESIVCSLTEILKNIFGMRKLIDTAGDYGTANIMDD-IMSDLEKHLWMHKALL  147 (151)
T ss_dssp             CCCCS-CSSSCCCSSCCTTSTTHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHTTTS
T ss_pred             CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            44332 232 78899999999999999999999999999999999999998 9999999998887655

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=99.52  E-value=2.8e-13  Score=110.26  Aligned_cols=132  Identities=15%  Similarity=0.204  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccc
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEW  151 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~  151 (239)
                      ...++.||.+++-|.+|...|+.+|.+++  ..|++.+|++|+..|.+|++||.++++++...|+ |. ..+      ..
T Consensus        11 ~~t~~nL~~afagEs~A~~~Y~~~A~~A~--~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~~~~-p~-~~~------~~   80 (144)
T 4di0_A           11 SKTEENLKYAFAGESQANRRYLYFASKAD--VEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGD-PA-TGL------PF   80 (144)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC-TT-TSC------CC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cc-cCC------CC
Confidence            46789999999999999999999999999  6799999999999999999999999999876553 31 111      14


Q ss_pred             ccHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        152 NTVEDLLTEALHMEKQL-NEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~v-t~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      ++..+-|+.|++.|... +..|....++|+++++....++++. ....+..|.+.+..+|.+|+
T Consensus        81 ~~T~enL~~A~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~f~~-~a~~E~~Ha~~~~~~l~~l~  143 (144)
T 4di0_A           81 GTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFET-LAKAERSHANRYTKALDGLV  143 (144)
T ss_dssp             SSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHTCC
T ss_pred             CcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCcHHHHHHHHH-HHHHHHHHHHHHHHHHhhcc
Confidence            57899999999999999 5799999999999999999999998 99999999999999988653

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=99.24  E-value=4.9e-10  Score=91.96  Aligned_cols=138  Identities=13%  Similarity=0.066  Sum_probs=113.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccccCC------CC
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR--GGQLRLTS------IE  144 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~R--GG~v~l~~------I~  144 (239)
                      .+.+.|+..|..|..+..+|..+|..++  .++.+.+++.|...|.+|+.|+..|.++...+  .+.+....      ..
T Consensus         5 ~~~e~L~~Ai~~E~~~~~~Y~~lA~~~~--~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   82 (167)
T 2oh3_A            5 TLAEFLAHAIALETEAAERYVELADMME--AHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEV   82 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccCCCcHhh
Confidence            3789999999999999999999999887  56789999999999999999999999998774  33222221      00


Q ss_pred             CC--CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        145 AP--SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       145 ~p--~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      .+  ......++.++++.|+..|+....-|..+   |....|+.+..+++. ++.++.+|++.|..+++.+..-
T Consensus        83 ~~~~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~---a~~~~d~~~k~~~~~-la~eE~~H~~~l~~~~~~~~~~  152 (167)
T 2oh3_A           83 GDENDIHYLMTPYHALRYARDNEIRGMEYYKEA---AANSADPEVKRLGAD-FAAEEAEHVVALDKWIEKTPRP  152 (167)
T ss_dssp             SCC---CGGGSHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHSCCC
T ss_pred             hhHhhccccCCHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHccCc
Confidence            01  11123479999999999999999999888   556689999999998 9999999999999998877654

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=99.20  E-value=1.1e-09  Score=90.25  Aligned_cols=135  Identities=17%  Similarity=0.113  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCC---CCC---
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR-GGQLRLTS---IEA---  145 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~R-GG~v~l~~---I~~---  145 (239)
                      .+.+.|+..+..|..+...|..+|..+.  +   +.+++.|...|.+|+.|+..|.+++..+ |+.+.+..   +-.   
T Consensus        20 ~~~e~L~~A~~~E~~a~~~Y~~~A~~~~--~---~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~~~~~~~~~~   94 (175)
T 2fzf_A           20 SLEELLGMAIKAEIGAREFYKSLAEKIK--I---EALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQ   94 (175)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSCC--C---TTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhhhh
Confidence            5789999999999999999999999887  2   7899999999999999999999999887 44433221   100   


Q ss_pred             CC---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        146 PS---KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       146 p~---~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      |.   .....+..++++.|+..|+.....|.++...+   .|+.+..+|.. ++.++.+|++.|..++..+...
T Consensus        95 ~~~~~~~~~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~---~d~~~r~l~~~-ia~eE~~H~~~l~~~l~~l~~~  164 (175)
T 2fzf_A           95 PVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMV---KEEEKKRLMRY-LADMERGHYYTLRAEYELLLNW  164 (175)
T ss_dssp             CCCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---CSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHhhC---CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhH
Confidence            00   01234689999999999999999999887764   69999999998 9999999999999999998764

>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A

Probab=98.94  E-value=7.8e-09  Score=86.89  Aligned_cols=141  Identities=14%  Similarity=0.162  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc---------cCC
Q psy10513         73 DCIDKINTQINDEIRS-AYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR---------LTS  142 (239)
Q Consensus        73 eve~~LN~qIn~EL~A-s~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~---------l~~  142 (239)
                      ...+.|+..+.-|.+. ...|..+|..++  ..|++.+|+.|+..|..|..||.++.+++...++.+.         +..
T Consensus        24 ~T~eNL~~A~~GE~~E~~~~Y~~fA~~A~--~EG~~~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~~  101 (179)
T 3qhb_A           24 NTDANAASSIEVEMYECDCMYPTFAEIAR--RSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVST  101 (179)
T ss_dssp             SHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhHHHHHHHHHHHHHHHHH--HcChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence            3568899999999999 789999999999  4599999999999999999999999999976554420         001


Q ss_pred             CCCCC---ccccccHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        143 IEAPS---KQEWNTVEDLLTEALHMEKQ-LNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       143 I~~p~---~~~~~s~~eale~AL~~Ek~-vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      ...|.   .+.-.++.++|+.|++.|.. .+..|-...++|+++++....+.+.. ....+..|.+.+..+|.+|.++
T Consensus       102 ~~~p~~~~~~T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~~-ia~~Ek~H~~ry~~ll~~l~~~  178 (179)
T 3qhb_A          102 IESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEA-IVKSETKHANWVKRALENLLEV  178 (179)
T ss_dssp             HHHTHHHHHHSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence            12222   11233477789999999996 68899999999999999999999998 9999999999999999999764

>4a25_A DPS, ferritin DPS family protein; metal binding protein, detoxification process; 2.00A {Kineococcus radiotolerans}

Probab=98.85  E-value=2.2e-07  Score=76.96  Aligned_cols=131  Identities=7%  Similarity=-0.016  Sum_probs=107.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC-------CC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT-------SI  143 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~-------~I  143 (239)
                      ++++.+.||..++..+.-+..+..+--+..  +..+..+-.+|..++++.++|++.+.++|...||.|.-.       .+
T Consensus        22 ~~~i~~~Ln~~LAd~~~Ly~k~k~~HWnV~--G~~F~~lH~~fee~y~e~~~~~D~iAERI~~LGg~P~~~~~~~~~~~~   99 (169)
T 4a25_A           22 SSRLNAGLQEVLVDLTALHLQGKQAHWNIV--GENWRDLHLQLDTLVEAARGFSDDVAERMRAVGGVPDARPQTVAASRI   99 (169)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhceeeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccHHHHHHhcC
Confidence            467999999999998888877776544444  678999999999999999999999999999999988421       22


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHH
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTL  206 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L  206 (239)
                      .... ....+..++++..++..+.+...+++++..|. .+|+.|.++|.. ++.+..+.+=.|
T Consensus       100 ~~~~-~~~~~~~~mv~~l~~~~~~~~~~~r~~~~~ae-~~D~~T~dll~~-~~~~~EK~~WmL  159 (169)
T 4a25_A          100 GDVG-PDEIDTRACVEAIVALVRHTVDTIRRVHDPID-AEDPASADLLHA-ITLELEKQAWMI  159 (169)
T ss_dssp             CCCC-SSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHH-HHHHHHHHHHHH
T ss_pred             cccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHH-HHHHHHHHHHHH
Confidence            2222 14557899999999999999999999999886 589999999998 888877765333

>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}

Probab=98.70  E-value=1.2e-06  Score=71.19  Aligned_cols=137  Identities=13%  Similarity=0.102  Sum_probs=100.1

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      +++-+.+.++++..||+.|..+..+...|-.++...+     =+.+..+|...+.+...|+..|-.+|...||.|....-
T Consensus         2 ~~~~~~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~~-----d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~~~s   76 (153)
T 4etr_A            2 SHMNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLR-----DPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTS   76 (153)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-----
T ss_pred             cchhHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            3455667899999999999999999999999888665     46899999999999999999999999999999875442


Q ss_pred             CC-CCccccc---------cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        144 EA-PSKQEWN---------TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       144 ~~-p~~~~~~---------s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                      -. .....|.         +...+|+.+..-|..+...|.++.+   ..-++.+...|+. -+.....+.++|..+
T Consensus        77 ~~g~~hr~~~~lks~~~~~~~~~iL~~~~~gE~~~~~~Y~~al~---~~lp~~~r~ll~~-q~~~~~~~~d~~~~L  148 (153)
T 4etr_A           77 FAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALE---KSLPAEIHQVIER-QYQGVLRHHDRVRAL  148 (153)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHHH---SCCCHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHh---ccCCHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            11 1122443         2466899999999999999999887   3378888888887 566666666666654

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=98.61  E-value=2.4e-06  Score=69.27  Aligned_cols=130  Identities=13%  Similarity=0.084  Sum_probs=103.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-ccc----CCCCC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQ-LRL----TSIEA  145 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~-v~l----~~I~~  145 (239)
                      +....+.|...|..|..+...|..+|. ..     -+.+.+.|...|.+|+.|+..|.++..  ++. +..    ..+..
T Consensus        12 ~~~~~e~L~~Ai~~E~~~~~~Y~~lA~-~~-----~~~~k~lF~~LA~eE~~H~~~l~~l~~--~~~~~~~~~~l~~~~~   83 (157)
T 1vjx_A           12 HMKVSDILTVAIRLEEEGERFYRELSE-HF-----NGEIKKTFLELADQERIHAEIFRKMSD--QENWDEVDSYLAGYAF   83 (157)
T ss_dssp             SCBHHHHHHHHHHHHHHHHHHHHHHTT-SC-----CSHHHHHHHHHHHHHHHHHHHHHHHHH--HSCHHHHTCBCCSBCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHH-cC-----CHHHHHHHHHHHHHHHHHHHHHHHhhc--cCcchhHHHHHHhhhh
Confidence            455778999999999999999999998 54     488999999999999999999999853  221 221    11111


Q ss_pred             CC-cc--------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        146 PS-KQ--------EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       146 p~-~~--------~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                      .. ..        ...+..++++.|+..|+....-|.++...   ..|..+..+|.. +..++.+|...|..+++.
T Consensus        84 ~~~f~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~~a~~---~~d~~~k~l~~~-la~eE~~H~~~l~~~~~~  155 (157)
T 1vjx_A           84 YEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDG---LVNSDAQKTVKK-IIDQEKEHLRKLLEMKRE  155 (157)
T ss_dssp             CCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH---CCSHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred             hhccchhhhhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHh---CCCHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence            00 01        12358999999999999999999988664   579999999998 999999999999988764

>1zs3_A Lactococcus lactis Mg1363 DPSA; oxidative stress, DNA binding, lactic acid bacteria, DNA binding protein; 2.70A {Lactococcus lactis} SCOP: a.25.1.1

Probab=98.58  E-value=3.8e-06  Score=70.57  Aligned_cols=133  Identities=14%  Similarity=0.078  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------c-CC
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------L-TS  142 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l-~~  142 (239)
                      +.+.+.||..+..-+.-+..+.. +.|+-+ +   |+|-.+|..++.+.+++...+.+++...||.|.        + ..
T Consensus        25 ~~~~~~Ln~~LAd~~~Ly~k~k~-~HWnV~-G---~~FH~~fee~y~~~~~~~D~iAERi~~LG~~p~~t~~e~~~~~s~   99 (182)
T 1zs3_A           25 PTAGAMLGHVLSNLFIENIRLTQ-AGIYAK-S---PVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKF   99 (182)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHH-HHHHCS-S---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-cceeeE-C---hhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcCc
Confidence            46778899888877666665555 444442 2   345889999999999999999999999999884        5 66


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      |+..+...+.+..++++..++.-..+...+++++.+|.+.+|+.|.++|.. ++.+..+.+=.|+.+|
T Consensus       100 i~e~~~~~~~~~~e~l~~L~~d~~~~~~~~r~~i~~A~e~~D~~Tadll~~-~~~~~EK~~WmL~a~L  166 (182)
T 1zs3_A          100 ITEDPKAKYWTDEDLLESFIVDFQAQNMFITRAIKLANKEEKFALAAGVVE-LYGYNLQVIRNLAGDL  166 (182)
T ss_dssp             CCCCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            776553224588999999999999999999999999999999999999998 8888888776666554

>1zuj_A Hypothetical protein llacc01001955; oxidative stress, DPS, DNA binding, lactic acid bacteria, DN protein; 2.90A {Lactococcus lactis} SCOP: a.25.1.1

Probab=98.56  E-value=4.7e-06  Score=69.80  Aligned_cols=135  Identities=13%  Similarity=0.054  Sum_probs=109.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------c-C
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------L-T  141 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l-~  141 (239)
                      .+.+.+.||..+..-+.-+..+.. +.|.-+ +   |+|-.+|..++.+.+++...+.+++...||.|.        + .
T Consensus        23 ~~~~~~~Ln~~LAd~~~Ly~k~~~-~HWnV~-G---~~FH~~fee~y~~~~~~~D~iAERi~~LG~~p~~t~~e~~~~~s   97 (179)
T 1zuj_A           23 KPTAGAMLSHVLSNIFYEKISLMQ-AGLYAK-S---ANYRIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHK   97 (179)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHH-HHHHCS-S---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-cceeeE-C---hhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcC
Confidence            356788899988877666665555 444442 2   445889999999999999999999999999884        5 6


Q ss_pred             CCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        142 SIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       142 ~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      .|+..+...+.+..++++..++.-..+...+++++.+|.+.+|+.|.++|.. ++.+..+.+=.|+.+|.
T Consensus        98 ~i~e~~~~~~~~~~e~l~~l~~d~~~~~~~~r~~i~~a~e~~D~~Tadll~~-~~~~~EK~~WmL~a~L~  166 (179)
T 1zuj_A           98 FIENDPKAKYWTDEALIENFINDFQNQNLFIGRAIKLAQKEEKFSLELAIRK-LYGYNLSIIPYFAGELG  166 (179)
T ss_dssp             SCCCCTTGGGSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            6776553224589999999999999999999999999999999999999998 89888888777766553

>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}

Probab=98.42  E-value=1.5e-05  Score=73.60  Aligned_cols=135  Identities=14%  Similarity=0.069  Sum_probs=105.0

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCC
Q psy10513         67 LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP  146 (239)
Q Consensus        67 rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p  146 (239)
                      |-.=..++..+||..+..|..+...|..++..-.     -|++-..|++...+++.|+++|-.|+...||.|..+..-.-
T Consensus       204 ~~~~~~~~v~~ln~a~~ge~~~~~a~e~~a~~~~-----d~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~~~  278 (365)
T 3fse_A          204 GGSTKGDIVRGLNTALGGERYSLEALEKYTEKES-----DVEAKALFQEMITNKQRHIEYLETYLTRLGEKPSLSANIAN  278 (365)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC---
T ss_pred             cCCchhhhhHHHHHHhhcChhHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcchhH
Confidence            4444678899999999999999999999888665     68899999999999999999999999999999987665432


Q ss_pred             Ccc---cc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        147 SKQ---EW---NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       147 ~~~---~~---~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      ...   .|   .+..++|+.||..|++-   +...+.++....|+.+..+|+. ++.    ++..++..|..|-
T Consensus       279 ~~a~~~~~~~~~~~~~~l~~al~~~~~g---i~~~~~l~~~~~dp~~~~i~~~-i~~----~l~~~e~~~~~l~  344 (365)
T 3fse_A          279 QYAKVKTALTGSDDIYQIRSALGDIQTG---IGDIGNLCAMYTDPIATAIFKE-IYK----DLVKYEQRLVSLY  344 (365)
T ss_dssp             ------------CHHHHHHHHHHHHHHH---HHHHHHHTTTCSCHHHHHHHHH-HHH----HHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCChHHHHHHHhcchhhh---HHHHHHHHHhcCCHHHHHHHHH-HHH----HHHHHHHHHHHHH
Confidence            211   22   45888999999999854   5555566668899999999997 555    6666666666553

>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A

Probab=98.11  E-value=3.2e-05  Score=68.56  Aligned_cols=135  Identities=10%  Similarity=0.136  Sum_probs=106.3

Q ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHHhcccCCccchhH-HHHHHHHHHHHHHHHHHHHHHHHHcCCccccC------
Q psy10513         72 EDCIDKINTQI---NDEIRSAYTYISMASFCTQDNVALFGF-AKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT------  141 (239)
Q Consensus        72 ~eve~~LN~qI---n~EL~As~~YlsmA~~f~~~~v~l~G~-A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~------  141 (239)
                      +..-++|-+|+   +-||.|+.+|+..++.+.  +   +++ ...|...+.||+.|++-|...|.++++.+.+.      
T Consensus        19 p~~A~~L~e~~GG~~GElsAamqYl~Q~~~~~--~---~~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~~~~a~~   93 (266)
T 1o9i_A           19 PIMARRLQESLGGQWGETTGMMSFLSQGWAST--G---AEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKR   93 (266)
T ss_dssp             HHHHHHHHHHHHSTTSHHHHHHHHHHHHHHCC--S---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHH
T ss_pred             HHHHHHHHHHhCCCccHHHHHHHHHHHHhcCC--C---cHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcchhhccc
Confidence            34445555554   679999999999999998  2   466 88999999999999999999999997642110      


Q ss_pred             -------------------CCC-CCCc---ccc--------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q psy10513        142 -------------------SIE-APSK---QEW--------NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF  190 (239)
Q Consensus       142 -------------------~I~-~p~~---~~~--------~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~F  190 (239)
                                         ... .|..   .-|        +++...|...++.|......+.+|+++.   .|+.+++.
T Consensus        94 ~p~~~~~~~g~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~~niaaE~~Ar~~Y~rl~~~t---dDp~vkd~  170 (266)
T 1o9i_A           94 DPSLATTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMT---EDEGVRDM  170 (266)
T ss_dssp             CTTHHHHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC---CCHHHHHH
T ss_pred             chhhHhhhcCCChHHHHhcCCCCCccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhc---CChhHHHH
Confidence                               000 1110   112        4699999999999999999999999876   59999999


Q ss_pred             hHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        191 LEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       191 Le~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      |.. +|..++.|...+...|..|..
T Consensus       171 L~f-Li~RE~~H~~~f~~aLe~l~~  194 (266)
T 1o9i_A          171 LKF-LLARETQHQLQFMKAQEELEE  194 (266)
T ss_dssp             HHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHhh
Confidence            997 999999999999998888753

>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A

Probab=98.07  E-value=0.00011  Score=66.19  Aligned_cols=138  Identities=12%  Similarity=0.123  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccccCC----
Q psy10513         72 EDCIDKINTQI---NDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR--GGQLRLTS----  142 (239)
Q Consensus        72 ~eve~~LN~qI---n~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~R--GG~v~l~~----  142 (239)
                      +..-++|-+|+   +-||.|+.+|+..++.+... ..+..+...|...+.||+.|++-|...|.++  |..+....    
T Consensus        20 P~~A~~L~eq~GG~~GElsAamqYl~Qs~~~~~~-~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~   98 (302)
T 2v8t_A           20 PNAAAAVQALLGGRFGEMSTLMNYMYQSFNFRGK-KALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVD   98 (302)
T ss_dssp             HHHHHHHTHHHHSTTSHHHHHHHHHHHHHHCSCT-TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCC
T ss_pred             HHHHHHHHHHhCCCccHHHHHHHHHHHHccCCCC-cchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhcccc
Confidence            34444555554   67999999999999999831 2355788999999999999999999999998  44333210    


Q ss_pred             ----------------------C-CCCCc---ccc--------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHH
Q psy10513        143 ----------------------I-EAPSK---QEW--------NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLT  188 (239)
Q Consensus       143 ----------------------I-~~p~~---~~~--------~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~  188 (239)
                                            . ..|..   .-|        +++...|...++.|......+.+|+++.   .|+.+.
T Consensus        99 ~~~~p~~~a~~~~~~~~~i~~g~g~~p~ds~G~pWta~Yv~~~Gdl~aDL~~NiaAE~~Ar~~Y~rL~~~t---dDp~vk  175 (302)
T 2v8t_A           99 PASTPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMT---DNPVAR  175 (302)
T ss_dssp             GGGCTTGGGGGSSCSHHHHTSSSCCCSBCTTSCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC---CCHHHH
T ss_pred             cccchHHHhhhcCCcHHHhhcCCCCCccCCCCCCCCcchhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc---CChhHH
Confidence                                  0 00110   012        3689999999999999999999999876   599999


Q ss_pred             HHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        189 DFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       189 ~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      +.|.. +|..++.|...+...|..|.
T Consensus       176 d~L~f-Li~RE~~H~~~f~~ALe~l~  200 (302)
T 2v8t_A          176 EMIGY-LLVRGGVHAAAYGKALESLT  200 (302)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHhh
Confidence            99997 99999999999999999984

>1jm0_A Protein (four-helix bundle model); alpha-helical bundle, protein design, de novo protein; 1.70A {Synthetic} SCOP: k.8.1.1 PDB: 1jmb_A 1ovu_A 1ovv_A 1lt1_A 1ec5_A 1nvo_A 1ovr_A 2kik_A 1u7j_A 1y47_A 1mft_A 1u7m_A

Probab=97.19  E-value=0.00044  Score=46.15  Aligned_cols=48  Identities=23%  Similarity=0.223  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        156 DLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       156 eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      ++|+..|++|..+...|++.+..       +|+++|+. +|.++.+|+.||.++|.
T Consensus         2 EmL~~DL~~E~~~i~~l~eai~~-------vsr~lle~-iL~dEEeH~dwLetql~   49 (50)
T 1jm0_A            2 DYLRELLKLELQAIKQYREALEY-------VKLPVLAK-ILEDEEKHIEWLETILG   49 (50)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH-------HCCHHHHH-HHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHhhc
Confidence            68999999999999999999998       89999998 99999999999998764

>2ib0_A Conserved hypothetical alanine rich protein; 4-helix bundle, structural genomics, PSI-2, protein structur initiative; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.9

Probab=96.49  E-value=0.28  Score=40.45  Aligned_cols=121  Identities=15%  Similarity=0.110  Sum_probs=90.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC--CCCCCc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS--IEAPSK  148 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~--I~~p~~  148 (239)
                      ...-.++||..+..|..+.|.|=..+.+...   .....+.=|   ...-+.|.+.|+.-+..+|+.|....  -.-|. 
T Consensus        19 ~~~d~~aL~~ALaaEhaAIyaYGv~~a~l~~---~~~~~a~~~---~~~HrarRD~L~~~l~~~G~~pp~a~aaY~lP~-   91 (170)
T 2ib0_A           19 GSADNAALCDALAVEHATIYGYGIVSALSPP---GVNFLVADA---LKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPM-   91 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG---GGHHHHHHH---HHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCSS-
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhccCh---HHHHHHHHH---HHHHHHHHHHHHHHHHHcCCCCCCCcCcCCCCC-
Confidence            4445689999999999999999888888873   233333333   35668899999999999999864322  11221 


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAI  203 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i  203 (239)
                       .-++...+++.+..+|......+..++..+   .|..++.|--. .|.+-.-..
T Consensus        92 -~v~d~asa~~lAa~lE~~~A~ay~~~v~~a---~~~~~R~~A~~-aL~~aAvr~  141 (170)
T 2ib0_A           92 -QVSSAADAARLAVRMENDGATAWRAVVEHA---ETADDRVFAST-ALTESAVMA  141 (170)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHHHHHHHHC---CSHHHHHHHHH-HHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHhc---CCHHHHHHHHH-HHHHHHHHH
Confidence             357899999999999999999999998754   56888888877 666544433

>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4

Probab=96.17  E-value=0.25  Score=40.69  Aligned_cols=137  Identities=19%  Similarity=0.138  Sum_probs=109.5

Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCC-
Q psy10513         68 QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP-  146 (239)
Q Consensus        68 qn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p-  146 (239)
                      .++.+-.+..|.+.+..|-++.-.|-.|+.-..     -|.+..-|..+..+-+.|..+|-.-+-.+|+.|.-..-+.. 
T Consensus        11 ~~l~dlf~~~L~Diy~aE~q~~~aL~~~~~~a~-----~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~~~~~c~am~   85 (173)
T 2gyq_A           11 QTMEDLLLHGLRDIYYAEQQITKALPKMIEQAT-----NRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAID   85 (173)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCCCHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence            456778899999999999999999999999777     28999999999999999999999999999987642110000 


Q ss_pred             --------Ccccccc--HHHHHH--HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        147 --------SKQEWNT--VEDLLT--EALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       147 --------~~~~~~s--~~eale--~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                              ....+.+  ++++.-  .+...|..-+..|..|+.+|..-++......|+. -|.|+...-+||..+.
T Consensus        86 gli~e~~~~~~~~~~~~v~da~li~aaq~~EhyEIA~YgtL~a~A~~lG~~e~~~lL~~-~L~EE~~~d~~L~~la  160 (173)
T 2gyq_A           86 GLIKEADETAGEIADKTVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTT-NLNEEKAANTKLNTVA  160 (173)
T ss_dssp             HHHHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence                    0012222  444433  4459999999999999999999999999999998 8999999888887654

>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4

Probab=96.16  E-value=0.42  Score=39.05  Aligned_cols=138  Identities=15%  Similarity=0.108  Sum_probs=109.7

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCccccCCCCCC-
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK-RGGQLRLTSIEAP-  146 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~-RGG~v~l~~I~~p-  146 (239)
                      ++.+-.+..|.+.+..|-++.-.|-.|+.-..     -|.+..-|..+..+-+.|..+|-.-+-. +|+.|.-..-+.. 
T Consensus         5 ~l~dlf~~~L~D~y~aE~q~~~al~~~~~~a~-----~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~~~~~c~am~   79 (166)
T 2gs4_A            5 TIEDVFIHLLSDTYSAEKQLTRALAKLARATS-----NEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAME   79 (166)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence            45667789999999999999999999999776     3899999999999999999999999988 8987742110000 


Q ss_pred             --------Cccccc--cHHHHHH--HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        147 --------SKQEWN--TVEDLLT--EALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       147 --------~~~~~~--s~~eale--~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                              ....+.  .++++.-  .+...|..-...|..|+.+|..-++......|+. -|.|+...-+||..+...
T Consensus        80 gli~e~~~~~~~~~~~~vlda~li~aaq~~EhyEIA~YgtL~a~A~~lG~~~~~~lL~~-~L~EE~~~d~~L~~la~~  156 (166)
T 2gs4_A           80 GLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKE-TLEEEKATDIKLTDLAIN  156 (166)
T ss_dssp             HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence                    001122  2444444  5559999999999999999999999999999998 899999999999887643

>3ogh_B Protein YCIE; iron-binding, MCSG, four-helix-bundle, structural genomics, protein structure initiative; HET: MSE; 1.65A {Escherichia coli O6}

Probab=96.08  E-value=0.48  Score=39.01  Aligned_cols=141  Identities=15%  Similarity=0.041  Sum_probs=110.8

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC------
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS------  142 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~------  142 (239)
                      |..+-.+..|.+....|-++.-.--.|+.-..    ..|.+..-|..+..|-..|..+|-.-+-.+|..|.-..      
T Consensus         5 ~~~dlfi~~L~Diy~aE~Q~~~aL~~ma~~~a----~~peLk~a~e~Hl~eT~~qi~rLe~vf~~lg~~~~~~k~~m~gl   80 (171)
T 3ogh_B            5 NRIEHYHDWLRDAHAMEKQAESMLESMASRID----NYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKM   80 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccchHHHHHH
Confidence            45566788889999999999888888887644    47999999999999999999999999988998774211      


Q ss_pred             ---CCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        143 ---IEAPSK-QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       143 ---I~~p~~-~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                         ...... ..-+.++++.-.+...|..-..+|..|+.+|..-++......|+. -|.|+..--+||..++..|-
T Consensus        81 i~e~~~~~~~~~~d~v~d~~laaq~vEHyEIA~YgtL~a~A~~lG~~e~a~lL~~-~L~EE~~~a~~L~~~l~~lt  155 (171)
T 3ogh_B           81 AALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEA-ILNEEKHMADWLIQHIPQTT  155 (171)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHhCHHHH
Confidence               111110 011234554447889999999999999999999999999999998 99999999999998887764

>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}

Probab=95.91  E-value=0.06  Score=40.42  Aligned_cols=58  Identities=19%  Similarity=0.329  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRG  135 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RG  135 (239)
                      .++..++.. |..|+.|.+.|..++..++     -+.+-+.|...++||.+|+-.|++.|..+.
T Consensus        18 ~d~~Rai~s-l~~EleAI~~Y~q~a~~~~-----d~~~k~vl~~i~~EEkeH~g~~lelLrr~D   75 (95)
T 3k6c_A           18 RDMHRAIIS-LREELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRCD   75 (95)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            357778874 5689999999999999988     467889999999999999999999998765

>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A

Probab=95.89  E-value=0.062  Score=40.35  Aligned_cols=59  Identities=19%  Similarity=0.315  Sum_probs=50.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRG  135 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RG  135 (239)
                      +.++..+|. .|-.|+.|.+.|..+|..++     -+.+-+.|...++||.+|+-.|+++|....
T Consensus        17 ~~d~~rai~-aL~~EleAI~~Y~q~A~~t~-----D~evk~vl~~iadEEkeH~g~~l~~Lrr~d   75 (95)
T 1zpy_A           17 TRDMHRAII-SLREELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRCD   75 (95)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            445667777 44599999999999999998     367888999999999999999999997753

>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A

Probab=95.58  E-value=0.53  Score=42.82  Aligned_cols=163  Identities=16%  Similarity=0.130  Sum_probs=114.5

Q ss_pred             CCCCCCCCCCCCCccc-cc------hhhchHHHHHHHHHHHHHHHHHHHHHHH-HHHhcc-cCCcc--chhHHHHHHHHH
Q psy10513         49 TQSSQHSPDSLGKTER-QT------LQNFHEDCIDKINTQINDEIRSAYTYIS-MASFCT-QDNVA--LFGFAKFFTHSY  117 (239)
Q Consensus        49 ~~~~~~~~~~~~~~~s-~~------rqn~s~eve~~LN~qIn~EL~As~~Yls-mA~~f~-~~~v~--l~G~A~fF~~~A  117 (239)
                      =|..|-=|.+.|.... .+      ...++..+..+|---+-.| .+.=.|.. ++.+|. ++..|  -.+++.|.....
T Consensus        37 Wqp~D~lPw~~~~~F~~~~~~~~~~~~~l~d~~~v~lv~~~iTE-d~LPtY~~~L~~~fgvrd~~g~~~~~w~~w~~~Wt  115 (338)
T 2uw1_A           37 WQPQDYLPDPVSDGFEEQVRELRERAKEIPDDYFVVLVGDMITE-EALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWT  115 (338)
T ss_dssp             CCGGGGSCCTTSTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH-HTHHHHHHHHTTSTTTSCSSSSCCSHHHHHHHHHH
T ss_pred             CCchhcCCCccccchhhhcccccHhhccCCHHHHHHHHHHHHhh-hcchHHHHHHHHHcCcccccCCCcchHHHHhhhHh
Confidence            4445555777766642 11      2357777765554444444 33334433 344443 22222  578999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCccccCCCC-----------CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChH
Q psy10513        118 KEEIEHMEHLIAYLNKRGGQLRLTSIE-----------APSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDAN  186 (239)
Q Consensus       118 ~EE~eHA~kLi~yl~~RGG~v~l~~I~-----------~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~  186 (239)
                      .||-.|+.-|-+|+.--|. |+...+.           .|..  -.++...|-...-.|+...-.+.++.++|...+|+.
T Consensus       116 aEEnrHg~aL~~YL~lsgr-vDp~~lE~~~~~~i~~Gfd~~~--~~~p~~~~vy~sfQE~AT~vsh~n~~r~A~~~gdPv  192 (338)
T 2uw1_A          116 AEENRHGDLLNKYLYLSGR-VDMRKIEKTIQYLIGSGMDIKS--ENSPYLGFIYTSFQERATFISHANTAKLAQHYGDKK  192 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHSS-SCHHHHHHHHHHHHHHCCCCCC--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence            9999999999999986443 3322221           1111  135888999999999999999999999999999999


Q ss_pred             HHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        187 LTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       187 t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      +...+.. +=.++..|..-..+++..+-.+
T Consensus       193 La~i~~~-IA~DE~RH~~~Y~~~v~~~le~  221 (338)
T 2uw1_A          193 LAHICGS-IASDEKRHATAYTKIVEKLAEI  221 (338)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998 9999999999999999876544

>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2

Probab=95.48  E-value=0.78  Score=40.53  Aligned_cols=143  Identities=14%  Similarity=0.037  Sum_probs=97.2

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISM-ASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS  142 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~Ylsm-A~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~  142 (239)
                      ......+++....+|---+-.| .+.-.|..+ +.+|..   . ++++.|......||..|+.-|-+|+.-- |.+....
T Consensus        55 ~~~~~~L~d~~~~~l~~~~itE-d~LP~Y~~~L~~~~~~---d-~~w~~w~~~WtaEE~rHg~aL~~YL~~s-g~vdp~~  128 (275)
T 1za0_A           55 DPSQSTLPRTITDACEILLILK-DNLAGHHRELVEHFIL---E-DWWGRWLGRWTAEEHLHAIALREYLVVT-REVDPVA  128 (275)
T ss_dssp             CGGGCCSCHHHHHHHHHHHHHH-HC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCSCTTT
T ss_pred             cHhhccCCHHHHHHHHHHHHHh-hcchHHHHHHHHhcCC---C-chHHHHhhhHhHHHHHHHHHHHHHHHHh-CCCCHHH
Confidence            3334567777766665555555 333344432 344432   1 6799999999999999999999999854 4466655


Q ss_pred             CCCCCc----c----ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        143 IEAPSK----Q----EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       143 I~~p~~----~----~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      +..-..    .    ...++...|-...-.|+...-.+.++.+   ..+|+.+...+.. +-.++..|..-..+++..+=
T Consensus       129 lE~~~~~~i~~g~~~~~~~p~~~~vy~~fqE~aT~v~y~n~a~---~~~dPvL~~i~~~-IA~DE~RH~~~y~~~v~~~l  204 (275)
T 1za0_A          129 NEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLAA---QIEEPILAGLIDR-IARDEVRHEEFFANLVTHCL  204 (275)
T ss_dssp             TTCTTC----------CCCHHHHHHHHHHHHHHHHHHHHHHHH---HCCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---hcCChHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            554311    1    1236888888888889888877777763   5789999999998 99999999999999988864


Q ss_pred             hH
Q psy10513        215 RT  216 (239)
Q Consensus       215 ~~  216 (239)
                      ..
T Consensus       205 e~  206 (275)
T 1za0_A          205 DY  206 (275)
T ss_dssp             HH
T ss_pred             Hh
Confidence            43

>3hiu_A Uncharacterized protein; APC40011, XCC3681, xanthomonas campestris PV. campestris STR. ATCC 33913, structural genomics, PSI-2; HET: MSE; 1.85A {Xanthomonas campestris PV}

Probab=94.80  E-value=1.4  Score=36.06  Aligned_cols=137  Identities=12%  Similarity=0.102  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC--CCCCC---
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS--IEAPS---  147 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~--I~~p~---  147 (239)
                      -.+..|.+....|-++.-.--.|+.-..    ..|.+..-|..+..|-..|..+|-.-+..+|..|.-..  +....   
T Consensus         6 lf~~~L~Diy~aE~Q~~~aL~~ma~~~a----~~peLk~a~e~Hl~eT~~qi~rLe~vf~~lg~~~~~~k~~m~gli~e~   81 (166)
T 3hiu_A            6 RLVKWLQDAYAMEKEAETMMAAMASRIE----HYPELKRRIEQHVEETQQQSAGVQRCLELLNGSIPTAKGMLSSVLASM   81 (166)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCS----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCchHHHHHHHHH
Confidence            3467788888888888888778876433    47999999999999999999999999988998775322  11000   


Q ss_pred             ---cccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        148 ---KQEW--NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       148 ---~~~~--~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                         ...+  +.++++.-.+...|..-..+|..|+.+|..-++......|+. -|+|+..--+||..+|..|-
T Consensus        82 ~~~~~~~~~d~v~d~~laaq~vEHyEIA~YgtL~a~A~~lG~~e~a~lL~~-~L~EE~~~a~~L~~~l~~lt  152 (166)
T 3hiu_A           82 HAAGNSMMTDEVTKGVGISYAFEHLEIASYRALVVAARSAGEQEVAQICED-ILQQEIEMAEWLIEHQEAIV  152 (166)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHhhCHHHH
Confidence               0111  235554448899999999999999999999999999999998 99999999999998887764

>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}

Probab=94.46  E-value=0.24  Score=44.68  Aligned_cols=68  Identities=12%  Similarity=0.085  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTS  142 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~  142 (239)
                      .++..+|+..|..|+...-.||..++-....  + ...+.-.+.-+.|||-|.....+-++..||.|.+..
T Consensus         9 ~~L~~~Lq~Ai~lE~stIp~YL~a~ySi~~~--n-~~~~~~i~~V~~eEMlHl~l~aNll~AiGg~p~~~~   76 (317)
T 3hl1_A            9 PRLYQHFQGAIDLELWTIPYYLTVLYSIKDP--T-TVPYRLIQAAVYQEMLHAQLVSNIANAYGYSPTLSA   76 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHBSCT--T-SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--C-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence            4788999999999999999999887777632  2 367788999999999999999999999999988754

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=92.73  E-value=0.3  Score=38.91  Aligned_cols=58  Identities=19%  Similarity=0.221  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         74 CIDKINTQINDEIRSA-YTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        74 ve~~LN~qIn~EL~As-~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      ..+.|-..+.-|..+. ..|..++..+.  ..|++.++.+|+..+..|..|+.++.+.+..
T Consensus        83 T~enL~~A~~GE~~e~~~~Y~~~a~~A~--~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~~  141 (144)
T 4di0_A           83 SRQNLQSAIAGETHEYTDMYPGMAKTAR--DEGFEEIANWFETLAKAERSHANRYTKALDG  141 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4677888899999996 69999999999  5599999999999999999999999988753

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=92.50  E-value=0.64  Score=36.82  Aligned_cols=59  Identities=17%  Similarity=0.132  Sum_probs=52.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      ....+..+|...|..|..|...|..++..+.  +   +..-+.|...+.+|..|...|.+++..
T Consensus        97 ~~~~~~~~l~~ai~~E~~a~~~Y~~~a~~~~--d---~~~k~l~~~la~eE~~H~~~l~~~~~~  155 (157)
T 1vjx_A           97 KDLTLKEVLDIAISVEKDSIILYYELKDGLV--N---SDAQKTVKKIIDQEKEHLRKLLEMKRE  155 (157)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--S---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3445788999999999999999999999987  2   788999999999999999999988754

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=92.02  E-value=0.93  Score=36.12  Aligned_cols=60  Identities=12%  Similarity=0.184  Sum_probs=54.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                      .++.++|..|+..|......|..+.......+|+.+..++.. +-.++.+|.+.|..++..
T Consensus         4 ~~~~e~L~~Ai~~E~~~~~~Y~~lA~~~~~~~~~~~k~~f~~-LA~eE~~H~~~l~~~~~~   63 (167)
T 2oh3_A            4 YTLAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRD-MARFSTLHGDEIKQRSRA   63 (167)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHTT
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhc
Confidence            468999999999999999999999987777899999999998 999999999999987654

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=91.41  E-value=1.2  Score=35.55  Aligned_cols=58  Identities=19%  Similarity=0.117  Sum_probs=51.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      ...+..+|...+..|..+...|..++..+.  +   +...+.|...+.+|..|...|.+++..
T Consensus       103 ~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~~--d---~~~r~l~~~ia~eE~~H~~~l~~~l~~  160 (175)
T 2fzf_A          103 VQDIIDLIRWAMKAEEIAAEFYLKLEEMVK--E---EEKKRLMRYLADMERGHYYTLRAEYEL  160 (175)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--S---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHhhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999999999876  3   789999999999999999999888765

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=91.16  E-value=0.72  Score=36.01  Aligned_cols=59  Identities=19%  Similarity=0.231  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         73 DCIDKINTQINDEIRS-AYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        73 eve~~LN~qIn~EL~A-s~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      .+.+.|...+..|..+ ...|-.++..+.  ..+....+.+|+..+.+|.+|+.++-+.+..
T Consensus        80 ~~~e~L~~al~~E~~~~~~~y~~~~~~A~--~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~  139 (144)
T 1j30_A           80 TLEQMIESAIAGETYEWTQMYPGFAKVAR--EEGFPEVAEWFETLARAEKSHAEKFQNVLKQ  139 (144)
T ss_dssp             SHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhHHHHHHHHHHHHHHHHH--HcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678888999999999 799999999999  5689999999999999999999999888753

>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7

Probab=89.85  E-value=8.2  Score=32.59  Aligned_cols=127  Identities=19%  Similarity=0.255  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc---
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK---  148 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~---  148 (239)
                      ..+...|.++.+-|..|+-.=++|=+.|-    ..+.+..-+-..|.||+.|-+++++.+..||.  .+..+.++.-   
T Consensus        26 ~nl~~iL~DHA~CE~KAA~tAm~Li~rYp----~~~~Lv~~m~~LarEEL~HFeqVl~im~~Rgi--~l~~~~~~~Ya~~   99 (206)
T 2itb_A           26 ADQETLLIDHKNCEFKAASTALSLIAKYN----THLDLINMMSRLAREELVHHEQVLRLMKRRGV--PLRPVSAGRYASG   99 (206)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCCCCCCCSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCCCCCCHHHHH
Confidence            44667889999999999998887766664    48899999999999999999999999999995  4555554421   


Q ss_pred             -------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        149 -------QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       149 -------~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                             .+-...++-|=.+--.|   ..+-.....+|..-.|. +..|-.. ++.-+..|-...-.+
T Consensus       100 L~k~vr~~ep~~l~D~Llv~AlIE---ARSCERF~lLa~~l~d~-L~~FY~~-Ll~SEArHy~~yl~L  162 (206)
T 2itb_A          100 LRRLVRAHEPVKLVDTLVVGAFIE---ARSCERFAALVPHLDEE-LGRFYHG-LLKSEARHYQGYLKL  162 (206)
T ss_dssp             HHTTSCSSTTHHHHHHHHHHHHHH---HHHHHHHHHHGGGSCHH-HHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             HHHHccCCChHHHHHHHHHHHHHH---HHhHHHHHHHHhcCcHH-HHHHHHH-HHHHHhhHHHHHHHH
Confidence                   01111222222111122   22233345556555566 9999998 888888776554433

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=88.68  E-value=4.2  Score=33.92  Aligned_cols=71  Identities=13%  Similarity=0.142  Sum_probs=59.9

Q ss_pred             CCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        141 TSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       141 ~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      ..+..|.. ..++..+.|..+++.|......|....+.|++++-.....++.. .-.++..|.+.+.++|..+
T Consensus        17 ~~~~~~~~-~~g~T~~nL~~a~~gE~~a~~~Y~~~A~~A~~eG~~~iA~~F~~-~A~~E~~HA~~~~~~l~~l   87 (202)
T 1yuz_A           17 NMVADSKT-AVGSTLENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEA-TAAAELIHIGLEYALVAEM   87 (202)
T ss_dssp             CCCSSCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence            33444443 45668999999999999999999999999999999999999998 8888888988888888754

>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}

Probab=88.00  E-value=0.097  Score=47.78  Aligned_cols=60  Identities=20%  Similarity=0.292  Sum_probs=0.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRG  135 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RG  135 (239)
                      ..++..+|...|..|+.|...|..+|..++.     +.+-+.|...++||++|+..|.+.+...+
T Consensus        17 ~~el~~air~ai~~E~eAi~~Y~q~A~~~~d-----~~~K~vl~~ia~EEk~H~~~f~~ll~~l~   76 (345)
T 2e0z_A           17 KEELMEILRLAIIAELDAINLYEQMARYSED-----ENVRKILLDVAREEKAHVGEFMALLLNLD   76 (345)
T ss_dssp             -----------------------------------------------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4577899999999999999999999999983     45778999999999999999999887654

>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A

Probab=87.86  E-value=3.1  Score=32.09  Aligned_cols=87  Identities=16%  Similarity=0.195  Sum_probs=67.5

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCC
Q psy10513         67 LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP  146 (239)
Q Consensus        67 rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p  146 (239)
                      ++.-..++..+|...+..|+.|...|-.+|.......     .-+-+..-.++|+.|...|..... -|         .|
T Consensus        26 ~~~~~~el~~lIr~~ikaE~~AI~~Y~qLA~~AP~ee-----~k~iI~eIr~DE~rH~~~F~~lY~-TG---------~p   90 (115)
T 2hz8_A           26 KEGDEQELARLIQEIVKAEKQAVKVYKEAAEKARNPE-----KRQVIDKILEDEEKHIEWLKAASK-QG---------NA   90 (115)
T ss_dssp             HHTCHHHHTTTHHHHHHHHHHHHHHHHHHHHSCCCTT-----TTTTHHHHHHHHHHHHHHHHHHHH-SS---------CC
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHH-hC---------Ch
Confidence            4445567778899999999999999999999988532     334567788999999999988776 44         33


Q ss_pred             CccccccHHHHHHHHHHHHHHHHHHHH
Q psy10513        147 SKQEWNTVEDLLTEALHMEKQLNEKLL  173 (239)
Q Consensus       147 ~~~~~~s~~eale~AL~~Ek~vt~~l~  173 (239)
                      .     +-.+.++.|+..|......++
T Consensus        91 ~-----sY~eGL~~A~~~Eqeave~Yr  112 (115)
T 2hz8_A           91 E-----QFASLVQQILQDEQRHVEEIE  112 (115)
T ss_dssp             T-----THHHHHHHHHHHHHHHHHHTT
T ss_pred             H-----hHHHHHHHHHHHHHHHHHHHH
Confidence            3     688899999999987766543

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=87.36  E-value=2.1  Score=33.65  Aligned_cols=58  Identities=17%  Similarity=0.285  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLN  132 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~  132 (239)
                      .+.+.|...+..|..+.-.|..+...+.  ..+-+..+.||.....+|.+|+..|-+++.
T Consensus        82 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~il~eEeeH~~~l~~~L~  139 (159)
T 4am5_A           82 TVKEVLESDLAAEREARALYQEGAAYAA--SVGDFPSKNLFEELMGDEEHHIDFLETQLD  139 (159)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4677888899999999999999999998  568899999999999999999988866553

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=86.76  E-value=2.1  Score=32.56  Aligned_cols=63  Identities=17%  Similarity=0.195  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQ  137 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~  137 (239)
                      .+.+.|...+..|-.+...|..+...+.  ..+-++...+|.....+|..|+..|-.++..-+|.
T Consensus        85 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~~~~~  147 (149)
T 2qqy_A           85 DVREMLEYARQSEYETIKRYEKRKEQAA--NLNMTELVVKLEDMIADETNHMEELDRLLNDKAMV  147 (149)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            4667888899999999999999999887  34678899999999999999999999988665553

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=86.71  E-value=3.6  Score=32.69  Aligned_cols=60  Identities=13%  Similarity=0.175  Sum_probs=52.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .+.++|..+++.|......|..++..+...+-+.+..|++. .-.++.+|.+.+..+|..+
T Consensus        11 ~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~-~a~eE~~Ha~~l~e~i~~l   70 (179)
T 1nfv_A           11 KVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKL-IAIDEMRHAENFAERIKEL   70 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999987777889999998 8888889999988877654

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=86.65  E-value=3.9  Score=31.37  Aligned_cols=60  Identities=12%  Similarity=0.024  Sum_probs=52.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .+.+.|..+++.|......|...+..+...+=+.+..|++. .-.+..+|.+.+...|..+
T Consensus         6 ~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~-~a~ee~~Ha~~l~e~i~~l   65 (158)
T 2y3q_A            6 KVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYH-ESIDEMKHADRYIERILFL   65 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999987767788999987 7888889999888877654

>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A

Probab=86.22  E-value=2.2  Score=35.25  Aligned_cols=58  Identities=19%  Similarity=0.194  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         74 CIDKINTQINDEIRS-AYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        74 ve~~LN~qIn~EL~A-s~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      +.+.|-..|.-|... ...|-.+|..+.  .-|++..+.+|+..+..|..|+.++-+.+..
T Consensus       116 ~~~~L~~A~~GE~~E~~~mYp~fA~~A~--eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~  174 (179)
T 3qhb_A          116 LRRALETALEVETIESQKTYPAFAKLAA--EQGNMEVATAFEAIVKSETKHANWVKRALEN  174 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566699999999985 578999999999  4589999999999999999999999887754

>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A

Probab=85.77  E-value=3.7  Score=30.65  Aligned_cols=59  Identities=12%  Similarity=0.110  Sum_probs=47.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      +..-|+. +|.-|....+-|.+++..   ..|+.+..++.. +-+|+.+|..++...|..+..-
T Consensus        19 d~~rai~-aL~~EleAI~~Y~q~A~~---t~D~evk~vl~~-iadEEkeH~g~~l~~Lrr~dp~   77 (95)
T 1zpy_A           19 DMHRAII-SLREELEAVDLYNQRVNA---CKDKELKAILAH-NRDEEKEHAAMLLEWIRRCDPA   77 (95)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHH---CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCHH
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHh---CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCHH
Confidence            4566666 778888888888877664   489999999997 9999999999998888777543

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=85.31  E-value=5.3  Score=30.71  Aligned_cols=60  Identities=13%  Similarity=0.070  Sum_probs=51.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .+.+.|..+++.|......|...+..+...+=..+..|+.. .-.+..+|.+.+...|..+
T Consensus         6 ~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~-~a~ee~~Ha~~l~e~i~~l   65 (161)
T 1jgc_A            6 KVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSRE-ESIEEMGHADKIIARILFL   65 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999987777788888887 7888888988888776554

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=82.93  E-value=8.3  Score=29.22  Aligned_cols=60  Identities=12%  Similarity=-0.012  Sum_probs=49.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .+.++|..+++.|......|...+..+...+=..+..|+.. -..++.+|.+.+...|..+
T Consensus         6 ~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~-~a~eE~~Ha~~l~e~i~~l   65 (155)
T 2fkz_A            6 IVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYH-ESIDEMKHADKLIKRILFL   65 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999877766777778866 4666688888887766554

>3q4o_A Uncharacterized protein MJ0754; ferritin-like protein, four-helix bundle, metal binding, DIN center, unknown function; HET: B3P; 1.34A {Methanocaldococcus jannaschii} PDB: 3q4q_A* 3q4r_A* 3q4n_A

Probab=82.88  E-value=20  Score=30.01  Aligned_cols=145  Identities=14%  Similarity=0.107  Sum_probs=96.4

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC--CCC
Q psy10513         67 LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLT--SIE  144 (239)
Q Consensus        67 rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~--~I~  144 (239)
                      .++++++-.+.|-..+..|.-|-.+|+.+---|.     +    .-|...+.-|..|+..+...+-+.|-.....  .+.
T Consensus        21 ~~~Ls~~E~~~Ll~m~EEEklArdvY~~l~e~~g-----~----~~F~NIa~SEq~H~dal~~Ll~rYgl~~P~~~~~~G   91 (196)
T 3q4o_A           21 MQPISEEEKEGLIEMREEEKLARDVYLTLYNKWK-----L----QIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIG   91 (196)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----C----HHHHHHHHHHHHHHHHHHHHHHHTTCCCSCSCCSTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----C----chHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            5789999999999999999999999998876554     3    4577788899999999988887777543321  111


Q ss_pred             CCCccc------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        145 APSKQE------------WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       145 ~p~~~~------------~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                      .....+            -.|..+|++.....|..-...|.++...   ..+..+..-+++ .+.=-.   +-|......
T Consensus        92 ~f~~p~lq~LY~~L~e~G~~S~~dAl~vGa~iEe~dI~dl~~~l~~---t~~~Di~~Vy~n-L~~gS~---nHLrAF~r~  164 (196)
T 3q4o_A           92 VFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINK---TDNEDIKFVYEN-LMKGSR---NHMRAFVRM  164 (196)
T ss_dssp             CCSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTT---CCCHHHHHHHHH-HHHHHH---HHHHHHHHH
T ss_pred             eeccHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhHHHHHHHHhc---CCcHHHHHHHHH-HHHHHH---HHHHHHHHH
Confidence            111112            2467788888888888888888876643   345555555555 333333   444444555


Q ss_pred             HhhHH---------HHHHHHHhcC
Q psy10513        213 VRRTQ---------LYLVDRDLMS  227 (239)
Q Consensus       213 L~~~g---------~ylfDk~L~~  227 (239)
                      |++.|         .--||.-+..
T Consensus       165 L~~~G~~Y~pq~ls~~e~~~i~~~  188 (196)
T 3q4o_A          165 LNNYGSNYTPQYISKEEYEEIISS  188 (196)
T ss_dssp             HHHTTCCCCCSSSCHHHHHHHHTS
T ss_pred             HHHCCCCCCCccCCHHHHHHHHCC
Confidence            56777         3356766654

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=80.90  E-value=10  Score=29.79  Aligned_cols=60  Identities=15%  Similarity=0.137  Sum_probs=52.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .+.+.|..+++.|......|...+..+...+=+.+..|++. .-.++.++.+.+..+|..+
T Consensus         8 ~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~-~a~eE~~Ha~~l~e~i~~l   67 (174)
T 3qb9_A            8 DVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRA-ESFDEMRHAEEITDRILLL   67 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHH-HHHHHHHHHHHHHHHHHHC
Confidence            57899999999999999999999999877666788899987 7888889999888877665

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=80.73  E-value=7.1  Score=30.15  Aligned_cols=59  Identities=14%  Similarity=0.099  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      .+.+.|...+..|..+...|..+...+.  ..+-++.+.||.....+|-+|+..|-.++..
T Consensus        84 ~~~e~l~~~l~~E~~~~~~~~~~~~~A~--~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~  142 (161)
T 3uoi_A           84 TLREQFEADLAIEYDVLNRLKPGIVMCR--EKQDTTSAVLLEKIVADEEEHIDYLETQLEL  142 (161)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4667888889999999999999998887  4578899999999999999999998887754

>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}

Probab=80.57  E-value=11  Score=34.15  Aligned_cols=58  Identities=19%  Similarity=0.222  Sum_probs=49.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      ..+.+|..++..|..-   +..+-..|....|+.+...|+. ++.+..+|+..|+.+|.++.
T Consensus       210 ~~v~~ln~a~~ge~~~---~~a~e~~a~~~~d~~~~~~~~~-i~~~~~~h~~~l~~~~~~~g  267 (365)
T 3fse_A          210 DIVRGLNTALGGERYS---LEALEKYTEKESDVEAKALFQE-MITNKQRHIEYLETYLTRLG  267 (365)
T ss_dssp             HHHHHHHHHHHHHHHH---HHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhHHHHHHhhcChhH---HHHHHHHHHhcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence            3788999999999887   4444455778899999999998 99999999999999998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	239
d1bg7a_	173	a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesb	6e-45
d1rcda_	171	a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesb	7e-45
d1z6om1	191	a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(T	3e-44
d1lb3a_	179	a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus)	2e-43
d1r03a_	171	a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens),	2e-42
d1z6oa1	200	a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(	2e-42
d1s3qa1	162	a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Arch	1e-37
d1euma_	161	a.25.1.1 (A:) Non-hem ferritin {Escherichia coli,	2e-37
d1vlga_	164	a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritim	1e-35
d1krqa_	165	a.25.1.1 (A:) Non-hem ferritin {Campylobacter jeju	5e-34
d2htna1	158	a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1	5e-22
d1jgca_	160	a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rh	4e-21
d1nf4a_	169	a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {De	2e-20
d2fkza1	154	a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1	3e-17
d1yuza1	135	a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain	3e-10
d1lkoa1	146	a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain	1e-06
d1j30a_	141	a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon	1e-06
d2bk6a1	150	a.25.1.1 (A:7-156) Dodecameric ferritin homolog {L	0.002

>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]} Length = 173

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

 Score =  146 bits (369), Expect = 6e-45
 Identities = 69/171 (40%), Positives = 97/171 (56%), Gaps = 7/171 (4%)

Query: 63  ERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIE 122
           + Q  QNFH DC   IN  +N E+ ++YTY+SMA +  +D++AL   AKFF     EE E
Sbjct: 1   DSQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEERE 60

Query: 123 HMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           H E L+   NKRGG++ L  ++ P + EW    + +  AL +EK +N+ LL LH   S  
Sbjct: 61  HAEKLMKDQNKRGGRIVLQDVQKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDK 120

Query: 183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR-------TQLYLVDRDLM 226
            D +L DFLE  Y +EQV +IK L D +T ++R          YL D+  M
Sbjct: 121 VDPHLCDFLETEYPEEQVKSIKQLGDYITNLKRLGLPQNGMGEYLFDKHTM 171

>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]} Length = 171

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

 Score =  146 bits (369), Expect = 7e-45
 Identities = 70/169 (41%), Positives = 103/169 (60%), Gaps = 7/169 (4%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QNFH+DC   +N  +N +  S+Y Y+SMAS+  +D+VAL  FAKFF    +EE EH 
Sbjct: 2   QVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHA 61

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E LI Y N+RGG++ L S+E P + +W    + L  AL ++K +N+ LL LHA A+   D
Sbjct: 62  EKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSD 121

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR-------TQLYLVDRDLM 226
            ++TDFLE  YL E V+ IK L D +T++++          YL ++  +
Sbjct: 122 PHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSHPGMAEYLFNKHTL 170

>d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]} Length = 191

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]

 Score =  145 bits (366), Expect = 3e-44
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 64  RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEH 123
            +     H  C + +  QI  E+ ++  Y++M +  ++D V   GFA+ F  +  EE EH
Sbjct: 11  PKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREH 70

Query: 124 MEHLIAYLNKRGGQLRLTS----IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACA 179
              LI YL  RG      S    +  P++  W    + L  AL ME  + + +  +    
Sbjct: 71  AMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKAC 130

Query: 180 SQ---HGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR-------TQLYLVDRDLMSG 228
                  D +L D+L G +L+EQ    + LA   +T+++          ++ D+ L+  
Sbjct: 131 EDDSEFNDYHLVDYLTGDFLEEQYKGQRDLAGKASTLKKLMDRHEALGEFIFDKKLLGI 189

>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]} Length = 179

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  142 bits (360), Expect = 2e-43
 Identities = 58/151 (38%), Positives = 87/151 (57%)

Query: 65  QTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHM 124
           Q  QN+  +    +N  +N  +R++YTY+S+  F  +D+VAL G   FF    +E+ E  
Sbjct: 2   QIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGA 61

Query: 125 EHLIAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGD 184
           E L+ + N RGG+     ++ PS+ EW   ++ +  AL MEK LN+ LL LHA  S   D
Sbjct: 62  ERLLEFQNDRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARAD 121

Query: 185 ANLTDFLEGRYLQEQVDAIKTLADLLTTVRR 215
            +L DFLE  YL ++V  IK + + LT +RR
Sbjct: 122 PHLCDFLESHYLDKEVKLIKKMGNHLTNLRR 152

>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]} Length = 171

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Human (Homo sapiens), mitocondial isoform [TaxId: 9606]

 Score =  139 bits (352), Expect = 2e-42
 Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 7/166 (4%)

Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           QNFH D    IN QIN E+ ++Y Y+SMA + ++D+VAL  F+++F H  +EE EH E L
Sbjct: 5   QNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKL 64

Query: 128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
           +   N+RGG++RL  I+ P + +W +    +  AL +EK +N+ LL+LHA AS  GD +L
Sbjct: 65  MRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHL 124

Query: 188 TDFLEGRYLQEQVDAIKTLADLLTTVRR-------TQLYLVDRDLM 226
            DFLE  YL EQV +IK L D +  + +          YL D   +
Sbjct: 125 CDFLETYYLNEQVKSIKELGDHVHNLVKMGAPDAGLAEYLFDTHTL 170

>d1z6oa1 a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]} Length = 200

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]

 Score =  140 bits (355), Expect = 2e-42
 Identities = 33/178 (18%), Positives = 70/178 (39%), Gaps = 20/178 (11%)

Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
              H +   ++       +  +Y Y+  A++         GF+K F     E       +
Sbjct: 19  YGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDI 78

Query: 128 IAYLNKRGGQLRLTSIEAP-----SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH 182
           I ++ KRG ++             +    N   + L +AL  +K+L E+   +H  A+++
Sbjct: 79  IKHVTKRGDKMNFDQHSTMKTERKNYTAENHELEALAKALDTQKELAERAFYIHREATRN 138

Query: 183 G----DANLTDFLEGRYLQEQVDAIKTLADLLTTVRR-----------TQLYLVDRDL 225
                D  +  +LE  ++++  + I+TLA   + +++             LY+ D  L
Sbjct: 139 SQHLHDPEIAQYLEEEFIEDHAEKIRTLAGHTSDLKKFITANNGHDLSLALYVFDEYL 196

>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 162

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  127 bits (320), Expect = 1e-37
 Identities = 46/159 (28%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
           E  ++ +N QIN EI SAY Y+SMAS+   D++ L GF+ +    ++EE+ H   +  ++
Sbjct: 4   EKMVEALNRQINAEIYSAYLYLSMASYF--DSIGLKGFSNWMRVQWQEELMHAMKMFDFV 61

Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
           ++RGG+++L ++E P   EW++           E  + +++ +L   A Q  D    +FL
Sbjct: 62  SERGGRVKLYAVEEP-PSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFL 120

Query: 192 EGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRDL 225
           +  Y+ EQV+   +  D++  +R        L  +D++L
Sbjct: 121 QW-YVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKEL 158

>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]} Length = 161

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Escherichia coli, FtnA [TaxId: 562]

 Score =  126 bits (318), Expect = 2e-37
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
             + I+K+N Q+N E+ S+  Y  M+++C        G A F     +EE+ HM+ L  Y
Sbjct: 2   KPEMIEKLNEQMNLELYSSLLYQQMSAWC--SYHTFEGAAAFLRRHAQEEMTHMQRLFDY 59

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           L   G   R+ ++E+P   E++++++L  E    E+ + +K+ +L   A  + D    +F
Sbjct: 60  LTDTGNLPRINTVESP-FAEYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNF 118

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRR-----TQLYLVDRDL 225
           L+  Y+ EQ +  K    ++  +         LY +D++L
Sbjct: 119 LQW-YVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKEL 157

>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]} Length = 164

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Thermotoga maritima [TaxId: 2336]

 Score =  122 bits (306), Expect = 1e-35
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 9/161 (5%)

Query: 70  FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIA 129
             E     +N Q+N EI S+Y Y+SMA++   D     GFA +     +EE+ H      
Sbjct: 4   ISEKVRKALNDQLNREIYSSYLYLSMATYF--DAEGFKGFAHWMKKQAQEELTHAMKFYE 61

Query: 130 YLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTD 189
           Y+ +RGG++ L +IE P    WN ++D    AL  E+ + + +  +   AS+  D     
Sbjct: 62  YIYERGGRVELEAIEKP-PSNWNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVS 120

Query: 190 FLEGRYLQEQVDAIKTLADLLTTVRR-----TQLYLVDRDL 225
           FL+  ++ EQV+    + ++L  + +     + ++ +DR L
Sbjct: 121 FLKW-FVDEQVEEEDQVREILDLLEKANGQMSVIFQLDRYL 160

>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]} Length = 165

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Campylobacter jejuni [TaxId: 197]

 Score =  118 bits (296), Expect = 5e-34
 Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 9/160 (5%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
            ++ +  +N QIN E+ +A  Y+SM+S+C     +L G   F      EE +H + LI Y
Sbjct: 3   SKEVVKLLNEQINKEMYAANLYLSMSSWC--YENSLDGAGAFLFAHASEESDHAKKLITY 60

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           LN+    + L  ++ P +Q + ++ D+  +    E+ + + +  L      H D +  +F
Sbjct: 61  LNETDSHVELQEVKQP-EQNFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNF 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRR-----TQLYLVDRDL 225
           L+  Y+ EQ +       ++  ++        LYL D+ +
Sbjct: 120 LQW-YVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYI 158

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]} Length = 158

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

 Score = 86.7 bits (214), Expect = 5e-22
 Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
               I+ +N  + +E+ +   Y   A      N  L        H   +E++H +  I  
Sbjct: 4   DTKVINYLNKLLGNELVAINQYFLHARMF--KNWGLKRLNDVEYHESIDEMKHADRYIER 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G   L  +          VE++L   L +E    + L +    A    D    D 
Sbjct: 62  ILFLEGLPNLQDLGKL--NIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDM 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
           +    L+++   I  L   L  +++   Q YL
Sbjct: 120 MI-EILRDEEGHIDWLETELDLIQKMGLQNYL 150

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]} Length = 160

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

 Score = 84.4 bits (208), Expect = 4e-21
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
               I+ +N  +  E+ +   Y         ++  L   AK       EE+ H + +IA 
Sbjct: 4   DAKVIEFLNAALRSELTAISQYWVHFRLQ--EDWGLAKMAKKSREESIEEMGHADKIIAR 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G   L  ++    +      + L   L  E    +   +     ++ GD    + 
Sbjct: 62  ILFLEGHPNLQKLDPL--RIGEGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNI 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
            E   + ++   +  L   ++   R   Q + 
Sbjct: 120 FE-SLITDEEGHVDFLETQISLYDRLGPQGFA 150

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]} Length = 169

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

 Score = 82.8 bits (204), Expect = 2e-20
 Identities = 21/154 (13%), Positives = 50/154 (32%), Gaps = 6/154 (3%)

Query: 68  QNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHL 127
           ++     I+ +N     E+ + + Y++       D++     A        +E+ H E+ 
Sbjct: 3   EDRKAKVIEVLNKARAMELHAIHQYMNQHYSL--DDMDYGELAANMKLIAIDEMRHAENF 60

Query: 128 IAYLNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL 187
              + + GG+                V  +       E    E   +      + GD   
Sbjct: 61  AERIKELGGEPTTQKEGKV--VTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVT 118

Query: 188 TDFLEGRYLQEQVDAIKTLADLLTTVRRT-QLYL 220
               E R ++E+   +    ++ + ++     YL
Sbjct: 119 ARLFE-RIIEEEQAHLTYYENIGSHIKNLGDTYL 151

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]} Length = 154

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

 Score = 73.6 bits (180), Expect = 3e-17
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 7/152 (4%)

Query: 71  HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAY 130
            +  I  +N  + +E+ +   Y   A     ++  L    K   H   +E++H + LI  
Sbjct: 4   DKIVIQHLNKILGNELIAINQYFLHARMY--EDWGLEKLGKHEYHESIDEMKHADKLIKR 61

Query: 131 LNKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF 190
           +    G   L  +           +++L   L +E+     L    A     GD    + 
Sbjct: 62  ILFLEGLPNLQELGKL--LIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASREL 119

Query: 191 LEGRYLQEQVDAIKTLADLLTTVRRT--QLYL 220
           LE   L+ + D I  L   L  + +   + YL
Sbjct: 120 LE-DILESEEDHIDWLETQLDLIDKIGLENYL 150

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]} Length = 135

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

 Score = 54.4 bits (130), Expect = 3e-10
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 4/131 (3%)

Query: 72  EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYL 131
              ++ +   I  E  +   Y + A    +        A+ F  +   E+ H+    A +
Sbjct: 5   GSTLENLKAAIAGETGAHAKYTAFAKAAREQG--YEQIARLFEATAAAELIHIGLEYALV 62

Query: 132 NKRGGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFL 191
            +        ++ APS   ++   +L++ A     + ++        A + G++      
Sbjct: 63  AEMEPGYEKPTVAAPSA--YSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVF 120

Query: 192 EGRYLQEQVDA 202
               L E V A
Sbjct: 121 TRAKLAESVHA 131

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]} Length = 146

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 19/136 (13%), Positives = 33/136 (24%), Gaps = 6/136 (4%)

Query: 75  IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR 134
              I T    E ++   Y        +D     GF +      +   +  EH        
Sbjct: 9   EKNILTAFAGESQARNRYNYFGGQAKKD-----GFVQISDIFAETADQEREHAKRLFKFL 63

Query: 135 GGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGR 194
            G         P+    +T  +L+  A     +  E        A + G   +       
Sbjct: 64  EGGDLEIVAAFPAGIIADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFA-S 122

Query: 195 YLQEQVDAIKTLADLL 210
               +    K   D  
Sbjct: 123 IAVAEEFHEKRFLDFA 138

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Length = 141

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 13/136 (9%), Positives = 35/136 (25%), Gaps = 8/136 (5%)

Query: 75  IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKR 134
            + +      E  +   Y+  A    ++     G+ +              H        
Sbjct: 8   AENLKQGFIGESMANRRYLYFAKRADEE-----GYPEIAGLLRSIAEGETAHAFG-HLDF 61

Query: 135 GGQLRLTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGR 194
             Q  LT      K      + + +       +  +        A + G   + ++ E  
Sbjct: 62  IRQGGLTDPATD-KPIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFE-T 119

Query: 195 YLQEQVDAIKTLADLL 210
             + +    +   ++L
Sbjct: 120 LARAEKSHAEKFQNVL 135

>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]} Length = 150

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Listeria innocua [TaxId: 1642]

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 8/96 (8%)

Query: 107 FGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQ--------LRLTSIEAPSKQEWNTVEDLL 158
           F   +     Y E  E M+ +   L   GG         L   S+E     +  T++ L+
Sbjct: 34  FTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLM 93

Query: 159 TEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGR 194
            + +   + L ++  +      + GD    D L   
Sbjct: 94  EDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIAF 129

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	239
d1rcda_	171	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	100.0
d1bg7a_	173	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	100.0
d1r03a_	171	(Apo)ferritin {Human (Homo sapiens), mitocondial i	100.0
d1lb3a_	179	(Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]	100.0
d1z6oa1	200	(Apo)ferritin {Cabbage looper(Trichoplusia ni), L	100.0
d1vlga_	164	Non-hem ferritin {Thermotoga maritima [TaxId: 2336	100.0
d1z6om1	191	(Apo)ferritin {Cabbage looper(Trichoplusia ni), H	100.0
d1krqa_	165	Non-hem ferritin {Campylobacter jejuni [TaxId: 197	100.0
d1s3qa1	162	Non-hem ferritin {Archaeon Archaeoglobus fulgidus	100.0
d1euma_	161	Non-hem ferritin {Escherichia coli, FtnA [TaxId: 5	100.0
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	99.97
d1jgca_	160	Bacterioferritin (cytochrome b1) {Rhodobacter caps	99.97
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	99.97
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	99.97
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	99.9
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	99.9
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	99.89
d1nnqa1	133	Rubrerythrin, N-terminal domain {Archaeon Pyrococc	99.66
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	99.48
d1o9ra_	162	Dodecameric ferritin homolog {Agrobacterium tumefa	99.43
d1tjoa_	180	Dodecameric ferritin homolog {Archaeon Halobacteri	99.42
d1jiga_	146	Dodecameric ferritin homolog {Bacillus anthracis,	99.35
d1umna_	151	Dodecameric ferritin homolog {Streptococcus suis [	99.32
d1ji5a_	142	Dodecameric ferritin homolog {Bacillus anthracis,	99.32
d2fjca1	151	Dodecameric ferritin homolog {Treponema pallidum,	99.29
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	99.26
d1n1qa_	149	Dodecameric ferritin homolog {Bacillus brevis, Dps	99.22
d1ji4a_	144	Dodecameric ferritin homolog {Helicobacter pylori,	99.2
d2bk6a1	150	Dodecameric ferritin homolog {Listeria innocua [Ta	99.1
d1dpsa_	159	Dodecameric ferritin homolog {Escherichia coli, Dp	99.04
d2ib0a1	142	Hypothetical protein Rv2844 {Mycobacterium tubercu	99.01
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	98.95
d2yw6a1	141	Dodecameric ferritin homolog {Mycobacterium smegma	98.89
d1zuja1	168	Dodecameric ferritin homolog {Lactococcus lactis,	98.56
d1zs3a1	171	Dodecameric ferritin homolog {Lactococcus lactis,	98.56
d1jkva_	266	Manganese catalase (T-catalase) {Lactobacillus pla	97.48
d2cwla1	299	Manganese catalase (T-catalase) {Thermus thermophi	97.25
d1zpya1	91	Hypothetical protein NE0167 {Nitrosomonas europaea	96.41
d1za0a1	267	Possible acyl-[acyl-carrier protein] desaturase {M	96.04
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	95.47
d1afra_	345	delta 9-stearoyl-acyl carrier protein desaturase {	93.8
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	92.77
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	90.71
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	90.19
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	89.16
d2itba1	199	Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Ps	87.27
d2gyqa1	160	Hypothetical ptotein RPA3308 {Rhodopseudomonas pal	86.03
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	85.9
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	85.3
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	84.44
d1jgca_	160	Bacterioferritin (cytochrome b1) {Rhodobacter caps	84.36
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	80.9

>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=100.00  E-value=1.3e-48  Score=325.08  Aligned_cols=164  Identities=43%  Similarity=0.737  Sum_probs=159.2

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      |++||||+++|+++||+|||.||+|||+|++||+||++++++|+|||+||+.+|.|||+||++|++||++|||.|.+.+|
T Consensus         1 ~~~r~n~~~e~~~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~Ha~~l~~yi~~rgg~~~~~~i   80 (171)
T d1rcda_           1 SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSV   80 (171)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeccc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH------
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ------  217 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g------  217 (239)
                      .+|+..+|.+++++|+.||++|+.|+..|++|+++|.+.+|+++++||+|.||+||++++++|+++|++|+++|      
T Consensus        81 ~~~~~~~~~s~~e~~~~al~~Ek~v~~~l~~l~~~a~~~~D~~~~~fle~~fl~eQ~e~~~~l~~~l~~l~~~~~~~~gl  160 (171)
T d1rcda_          81 EKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSHPGM  160 (171)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchh
Confidence            98887799999999999999999999999999999999999999999987799999999999999999999986      


Q ss_pred             -HHHHHHHhcC
Q psy10513        218 -LYLVDRDLMS  227 (239)
Q Consensus       218 -~ylfDk~L~~  227 (239)
                       +|+|||+|++
T Consensus       161 ~~yl~D~~ll~  171 (171)
T d1rcda_         161 AEYLFNKHTLG  171 (171)
T ss_dssp             HHHHHHHHTCC
T ss_pred             HHHHHhHHhcC
Confidence             7999999874

>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=100.00  E-value=9.3e-49  Score=326.42  Aligned_cols=165  Identities=42%  Similarity=0.697  Sum_probs=140.8

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      ||+||||+++|+++||+||+.||.|||+|++||+||++++++|+|||+||+.+|+|||+||++|++||+.|||.|.+++|
T Consensus         2 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~yl~~rgg~~~~~~i   81 (173)
T d1bg7a_           2 SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDV   81 (173)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH------
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ------  217 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g------  217 (239)
                      .+|+...|.+++++|+.||++|+.|++.|++|+++|.+.+|+++++||+|.||+||++++++|+++|++|+++|      
T Consensus        82 ~~~~~~~~~s~~~~~~~al~~Ek~v~~~l~~l~~~a~~~~D~~~~~fLe~~fl~eQ~e~~~~l~~~l~~l~~~g~~~~gl  161 (173)
T d1bg7a_          82 QKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYPEEQVKSIKQLGDYITNLKRLGLPQNGM  161 (173)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHC--------------------CTTHHHHHHHHHHHHHHHHHTTTTTCHH
T ss_pred             CCCCCCCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchh
Confidence            99877789999999999999999999999999999999999999999998899999999999999999999997      


Q ss_pred             -HHHHHHHhcCC
Q psy10513        218 -LYLVDRDLMSG  228 (239)
Q Consensus       218 -~ylfDk~L~~~  228 (239)
                       +|+|||+|++.
T Consensus       162 ~~~l~D~~ll~~  173 (173)
T d1bg7a_         162 GEYLFDKHTMGE  173 (173)
T ss_dssp             HHHHHHHHTTTC
T ss_pred             HHHHhhHHhcCC
Confidence             69999998763

>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Human (Homo sapiens), mitocondial isoform [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=317.14  Aligned_cols=164  Identities=42%  Similarity=0.694  Sum_probs=158.0

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      |.+||||+++|+++||+|||.||.|+++|++||.||.+++++|+|||+||+.+|.|||+||++|++||++|||.|.+.+|
T Consensus         1 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~a~EE~~Ha~~l~~yi~~rgg~~~~~~i   80 (171)
T d1r03a_           1 SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDI   80 (171)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCc
Confidence            57899999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH------
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ------  217 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g------  217 (239)
                      ++|..+.|.+++++|+.+|++|+.|+..|++|+.+|.+.+|++|.+||++.||+||++++++|+++|++|+++|      
T Consensus        81 ~~~~~~~~~s~~~~~~~~l~~E~~vt~~i~~l~~~a~~~~D~~t~~fle~~fl~eQ~e~~~~l~~~l~~l~~ig~~~~gl  160 (171)
T d1r03a_          81 KKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNLVKMGAPDAGL  160 (171)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTSTT
T ss_pred             cCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchH
Confidence            99987789999999999999999999999999999999999999999984499999999999999999999997      


Q ss_pred             -HHHHHHHhcC
Q psy10513        218 -LYLVDRDLMS  227 (239)
Q Consensus       218 -~ylfDk~L~~  227 (239)
                       +|+|||+|++
T Consensus       161 ~~~l~D~~ll~  171 (171)
T d1r03a_         161 AEYLFDTHTLG  171 (171)
T ss_dssp             HHHHHHHHTC-
T ss_pred             HHHHHhHHhcC
Confidence             6999999974

>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-47  Score=319.56  Aligned_cols=164  Identities=37%  Similarity=0.639  Sum_probs=157.6

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      |++||||+++|+++||+||+.||.|+|+|++||+||++++++++|||+||+.+|+|||+||++|++||++|||.|.+++|
T Consensus         1 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i   80 (179)
T d1lb3a_           1 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDV   80 (179)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH------
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ------  217 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g------  217 (239)
                      ++|+..+|++++++|+.||++|+.|++.|++|+++|.+.+|++|++||++.||+||++++++|+++|++|+++|      
T Consensus        81 ~~~~~~~~~~~~~~~~~aL~~Ek~v~~~l~~l~~~A~~~~D~~t~~fL~~~fl~eQ~e~~~~l~~~l~~l~ri~~~~~~~  160 (179)
T d1lb3a_          81 QKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARADPHLCDFLESHYLDKEVKLIKKMGNHLTNLRRVAGPQPAQ  160 (179)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             CCCCCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccch
Confidence            99887789999999999999999999999999999999999999999973399999999999999999999983      


Q ss_pred             ---------HHHHHHHhcC
Q psy10513        218 ---------LYLVDRDLMS  227 (239)
Q Consensus       218 ---------~ylfDk~L~~  227 (239)
                               .|+|||+|++
T Consensus       161 ~~~~~~~lg~~lfD~~~~~  179 (179)
T d1lb3a_         161 TGAPQGSLGEYLFERLTLK  179 (179)
T ss_dssp             ------CHHHHHHHHHTC-
T ss_pred             hccCCccchhhhhhHHhcC
Confidence                     7999999975

>d1z6oa1 a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]

Probab=100.00  E-value=5.6e-45  Score=310.64  Aligned_cols=164  Identities=20%  Similarity=0.352  Sum_probs=154.5

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSI  143 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I  143 (239)
                      ...|+++++.|+.+||.|||+||.|||+||+||+||++++++||||++||+.+|+|||+||++|++||++|||+|.+..|
T Consensus        15 ~~~~~~~~~~~e~~ln~~in~el~aSy~Ylama~~f~~~~~~l~GfakfF~~~S~EE~eHA~kl~~Yl~~RGg~v~~~~i   94 (200)
T d1z6oa1          15 VYGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQH   94 (200)
T ss_dssp             CCTTTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCC
T ss_pred             hhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCceecCcc
Confidence            34588899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCc-----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        144 EAPSK-----QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH----GDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       144 ~~p~~-----~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~----~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      ..|..     ..|.+++++|+.||++|+.||+.|++|+++|.++    +|+++.+||+|+||+||+++++++.++|++|+
T Consensus        95 ~~p~~~~~~~~~~~~~l~~~~~AL~~Ek~Vt~~i~~L~~~A~~~~~~~~D~~~~~fLe~~fi~EQvee~~~l~~~i~~L~  174 (200)
T d1z6oa1          95 STMKTERKNYTAENHELEALAKALDTQKELAERAFYIHREATRNSQHLHDPEIAQYLEEEFIEDHAEKIRTLAGHTSDLK  174 (200)
T ss_dssp             CCSCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98754     2477899999999999999999999999999876    69999999998899999999999999999999


Q ss_pred             hHH-----------HHHHHHHhcC
Q psy10513        215 RTQ-----------LYLVDRDLMS  227 (239)
Q Consensus       215 ~~g-----------~ylfDk~L~~  227 (239)
                      ++|           +|+||++|.+
T Consensus       175 rig~~~~~~~~~lg~ylfDk~L~k  198 (200)
T d1z6oa1         175 KFITANNGHDLSLALYVFDEYLQK  198 (200)
T ss_dssp             HHHHGGGGTTHHHHHHHHHHHHHH
T ss_pred             HhccccCCCcccchhhhhhHhhhh
Confidence            984           8999999975

>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.8e-44  Score=295.49  Aligned_cols=157  Identities=28%  Similarity=0.535  Sum_probs=152.4

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      .++++|+++||+|||.||.|+++|++||+||+  ++|++|||+||+.+|.|||+||++|++|++.|||.|.+++|++|..
T Consensus         3 ~~s~~v~~~LN~qi~~El~as~~Yl~ma~~~~--~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~   80 (164)
T d1vlga_           3 VISEKVRKALNDQLNREIYSSYLYLSMATYFD--AEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPS   80 (164)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCCCCCC
Confidence            46899999999999999999999999999998  7899999999999999999999999999999999999999999985


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       +|.+++++|+.+|++|+.|++.|++++++|.+++|++|++||+| ||.||++++++++++|++|+++|     +|+||+
T Consensus        81 -~~~~~~~~~~~al~~E~~v~~~~~~l~~~a~~~~D~~t~~fl~~-fl~eQ~e~~~~l~~~l~~l~~~g~~~~~~~~~D~  158 (164)
T d1vlga_          81 -NWNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKW-FVDEQVEEEDQVREILDLLEKANGQMSVIFQLDR  158 (164)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999998     899999


Q ss_pred             HhcCCC
Q psy10513        224 DLMSGK  229 (239)
Q Consensus       224 ~L~~~k  229 (239)
                      +|++++
T Consensus       159 ~L~~~~  164 (164)
T d1vlga_         159 YLGQRE  164 (164)
T ss_dssp             HHTTCC
T ss_pred             HHhcCC
Confidence            999874

>d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]

Probab=100.00  E-value=7.9e-44  Score=301.63  Aligned_cols=165  Identities=27%  Similarity=0.488  Sum_probs=151.2

Q ss_pred             ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc----
Q psy10513         64 RQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR----  139 (239)
Q Consensus        64 s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~----  139 (239)
                      ++-..+++++|+++||+|||.|+.|||+|++||+||++++++|+||++||+.+|+|||+||++|++||++|||++.    
T Consensus        11 ~~~~~~~~~~~e~aLn~qIn~El~aSy~Yl~ma~~f~~~~~~l~Gfa~ff~~~s~EE~eHa~kl~~Yl~~RGg~v~~~~~   90 (191)
T d1z6om1          11 PKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSS   90 (191)
T ss_dssp             CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGG
T ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccc
Confidence            4445678899999999999999999999999999999999999999999999999999999999999999999863    


Q ss_pred             cCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---ChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        140 LTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHG---DANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       140 l~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~---D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      +..+..|+...|.+++++|+.||++|+.||+.|++|+++|.+++   |+++.+||+++||+||+++++++.++|++|+++
T Consensus        91 ~~~~~~~~~~~~~s~l~a~~~AL~~Ek~vt~~i~~L~~~A~~~~d~~d~~~~~~le~~fl~eQve~~~~l~~~~~~L~~~  170 (191)
T d1z6om1          91 LLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDYHLVDYLTGDFLEEQYKGQRDLAGKASTLKKL  170 (191)
T ss_dssp             GCCCCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            55555665569999999999999999999999999999999876   677788888889999999999999999999998


Q ss_pred             H-------HHHHHHHhcCC
Q psy10513        217 Q-------LYLVDRDLMSG  228 (239)
Q Consensus       217 g-------~ylfDk~L~~~  228 (239)
                      |       +|+||++|++.
T Consensus       171 ~~~~~~Lg~ylfDk~Ll~~  189 (191)
T d1z6om1         171 MDRHEALGEFIFDKKLLGI  189 (191)
T ss_dssp             TTTCHHHHHHHHHHHHTTC
T ss_pred             cCCcchhHHHHhhHHHcCC
Confidence            6       69999999875

>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Campylobacter jejuni [TaxId: 197]

Probab=100.00  E-value=5e-44  Score=295.42  Aligned_cols=155  Identities=25%  Similarity=0.449  Sum_probs=150.5

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK  148 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~  148 (239)
                      +++++|+++||+|||.||.|+++|++||+||+  +++++|||+||+.+|.|||+||++|++||++|||.|.+.+|++|..
T Consensus         1 M~s~~v~~~LN~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~   78 (165)
T d1krqa_           1 MLSKEVVKLLNEQINKEMYAANLYLSMSSWCY--ENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQ   78 (165)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccCccccccc
Confidence            57899999999999999999999999999998  5699999999999999999999999999999999999999999985


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH
Q psy10513        149 QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDR  223 (239)
Q Consensus       149 ~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk  223 (239)
                       +|.+++++|+.+|++|+.|++.|++|+++|.+.+|++|++||+| ||.||++++++++++|++|+++|     +|+||+
T Consensus        79 -~~~~~~~~l~~al~~E~~v~~~~~~l~~~A~~~~D~~t~~fl~~-fl~eQ~e~~~~~~~~l~~l~~~g~~g~~l~~~D~  156 (165)
T d1krqa_          79 -NFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFLQW-YVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQ  156 (165)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHHHHHCSTTTHHHHHHH
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHH
Confidence             89999999999999999999999999999999999999999999 99999999999999999999997     899999


Q ss_pred             HhcC
Q psy10513        224 DLMS  227 (239)
Q Consensus       224 ~L~~  227 (239)
                      +|++
T Consensus       157 ~l~~  160 (165)
T d1krqa_         157 YIKN  160 (165)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9975

>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=1.1e-43  Score=292.03  Aligned_cols=156  Identities=29%  Similarity=0.546  Sum_probs=152.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcc
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQ  149 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~  149 (239)
                      ++++|+++||+|||.||.|+++|++||.||+  +++|+|||+||+.+|.|||+||++|++|+++|||.|.+.+|++|.. 
T Consensus         2 ~s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~s~eE~~Ha~~l~~yl~~rgg~~~~~~i~~p~~-   78 (162)
T d1s3qa1           2 ISEKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPS-   78 (162)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCc-
Confidence            6899999999999999999999999999997  7999999999999999999999999999999999999999999985 


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHH
Q psy10513        150 EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRD  224 (239)
Q Consensus       150 ~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk~  224 (239)
                      .|.+++++|+.+|++|+.+++.|++|+++|.+.+|++|++||+| ||.||++++++++++|++|+++|     +|+||++
T Consensus        79 ~~~~~~~~l~~~l~~E~~v~~~l~~l~~~a~~~~D~~t~~fl~~-~l~eQ~e~~~~l~~~l~~l~~~g~~~~gl~~~D~~  157 (162)
T d1s3qa1          79 EWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQW-YVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKE  157 (162)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHH
Confidence            89999999999999999999999999999999999999999999 99999999999999999999997     8999999


Q ss_pred             hcCCC
Q psy10513        225 LMSGK  229 (239)
Q Consensus       225 L~~~k  229 (239)
                      |+++|
T Consensus       158 l~~~~  162 (162)
T d1s3qa1         158 LSLRQ  162 (162)
T ss_dssp             HTTCC
T ss_pred             HhcCC
Confidence            99875

>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Escherichia coli, FtnA [TaxId: 562]

Probab=100.00  E-value=2.6e-43  Score=289.66  Aligned_cols=155  Identities=27%  Similarity=0.512  Sum_probs=150.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcc
Q psy10513         70 FHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQ  149 (239)
Q Consensus        70 ~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~  149 (239)
                      ++++|+++||+|||.||.|+|+|++||+||+  +++++|||+||+.+|.|||+||++|++||+.|||.|.+.+|++|.. 
T Consensus         1 l~~~~~~~LN~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~a~EE~~HA~~l~~yl~~rgg~~~~~~i~~p~~-   77 (161)
T d1euma_           1 LKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA-   77 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCc-
Confidence            4789999999999999999999999999999  5689999999999999999999999999999999999999999985 


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHH
Q psy10513        150 EWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-----LYLVDRD  224 (239)
Q Consensus       150 ~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-----~ylfDk~  224 (239)
                      +|.+++++|+.+|++|+.|++.|++|+++|.+.+|++|.+||+| ||.||++++++++++|++|+++|     +|+||++
T Consensus        78 ~~~~~~~~~~~al~~E~~v~~~~~~l~~~A~~~~D~~t~~fl~~-fl~eQ~e~~~~~~~~l~~l~~~g~~~~~~y~~D~~  156 (161)
T d1euma_          78 EYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQW-YVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKE  156 (161)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHH
Confidence            89999999999999999999999999999999999999999999 99999999999999999999997     8999999


Q ss_pred             hcCC
Q psy10513        225 LMSG  228 (239)
Q Consensus       225 L~~~  228 (239)
                      |++.
T Consensus       157 L~~~  160 (161)
T d1euma_         157 LSTL  160 (161)
T ss_dssp             HHHC
T ss_pred             HhcC
Confidence            9864

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.97  E-value=2.6e-31  Score=214.54  Aligned_cols=148  Identities=20%  Similarity=0.228  Sum_probs=142.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||++++.|+.|+++|+.+|.||+  ++++++++.||+.+|.+|++||.+|++|++.|||.|.+.++.+|.  .
T Consensus         4 ~~~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~--~~~~~~la~~f~~~a~eE~~Ha~~l~~~i~~lGg~p~~~~~~~~~--~   79 (154)
T d2fkza1           4 DKIVIQHLNKILGNELIAINQYFLHARMYE--DWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLL--I   79 (154)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--C
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccc--c
Confidence            589999999999999999999999999999  889999999999999999999999999999999999999998765  5


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVDR  223 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfDk  223 (239)
                      |.++.++++.++++|+.++..+++++++|...+|+.|.+||+| ||.+|++|+.+|.++|++++++|  .|+..|
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~-il~eE~~h~~~l~~~L~~~~~~g~~~yl~~q  153 (154)
T d2fkza1          80 GEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLED-ILESEEDHIDWLETQLDLIDKIGLENYLQSQ  153 (154)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhc
Confidence            9999999999999999999999999999999999999999998 99999999999999999999999  788764

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.97  E-value=2e-30  Score=211.30  Aligned_cols=146  Identities=15%  Similarity=0.165  Sum_probs=140.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++++++||++++.|+.|+++|+.+|.||+  +++++|++.||+.+|.||++||.+|++|++.|||.|.+..+..+.  .
T Consensus         4 ~~kvi~~LN~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~~--~   79 (160)
T d1jgca_           4 DAKVIEFLNAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLR--I   79 (160)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--C
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc--C
Confidence            589999999999999999999999999998  789999999999999999999999999999999999999998775  5


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLV  221 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylf  221 (239)
                      |.++.++|+.+|++|+.++..|+++++.|.+.+|+.|.+||+| ||.||.+|+.+|.++|+.++++|  .|+.
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~l~eee~h~~~l~~~l~~i~~~G~~~y~~  151 (160)
T d1jgca_          80 GEGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFES-LITDEEGHVDFLETQISLYDRLGPQGFAL  151 (160)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998 99999999999999999999999  5654

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=99.97  E-value=9.4e-30  Score=208.85  Aligned_cols=165  Identities=13%  Similarity=0.144  Sum_probs=149.8

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCC
Q psy10513         67 LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAP  146 (239)
Q Consensus        67 rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p  146 (239)
                      |++..+++++.||++++.|+.|+++|+.+|.+|+  ++++++++.||+.+|.+|+.||++|++||+.|||.|.+..+..|
T Consensus         2 ~~~~~~~ii~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~   79 (169)
T d1nf4a_           2 REDRKAKVIEVLNKARAMELHAIHQYMNQHYSLD--DMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKV   79 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCC
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcccccccc
Confidence            6777899999999999999999999999999998  89999999999999999999999999999999999999999988


Q ss_pred             CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHh
Q psy10513        147 SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ-LYLVDRDL  225 (239)
Q Consensus       147 ~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g-~ylfDk~L  225 (239)
                      .  .+.++.++|+.+++.|+.++..|++++.+|.+.+|+.|++||++ ||.+|.+|+.++.++|+.++++| .|+ -+.+
T Consensus        80 ~--~~~~~~e~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~l~~-il~eE~~H~~~~e~~l~~i~~~G~~yl-~~~~  155 (169)
T d1nf4a_          80 V--TGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFER-IIEEEQAHLTYYENIGSHIKNLGDTYL-AKIA  155 (169)
T ss_dssp             C--CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTHHHH-HHHT
T ss_pred             c--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHh
Confidence            7  48899999999999999999999999999999999999999999 99999999999999999999999 664 3444


Q ss_pred             cCCCCCCCCCCCC
Q psy10513        226 MSGKFSMHGNDNG  238 (239)
Q Consensus       226 ~~~k~~~~~~~~~  238 (239)
                      +.. +.--|.++|
T Consensus       156 ~~~-~~~~~~~~~  167 (169)
T d1nf4a_         156 GTP-SSTGTASKG  167 (169)
T ss_dssp             TCC-CCCSSCCCC
T ss_pred             CCC-CCCCCCCCC
Confidence            432 333344443

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=5.6e-30  Score=207.41  Aligned_cols=147  Identities=19%  Similarity=0.212  Sum_probs=141.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQE  150 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~  150 (239)
                      +++|+++||++|+.|+.|+++|+.||.||+  ++++++++.||+.+|.+|++||.+|++||+.+||.|.+..+..|.  .
T Consensus         4 ~~~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~--~~~~~~la~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~~--~   79 (158)
T d2htna1           4 DTKVINYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLN--I   79 (158)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--C
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc--C
Confidence            589999999999999999999999999998  789999999999999999999999999999999999999999886  4


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhHH--HHHHH
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRTQ--LYLVD  222 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~g--~ylfD  222 (239)
                      |.++.++|+.++..|+.++..|++++..|.+.+|+.|.+||++ ||.+|.+|+.+|..+|+.+.++|  .|+-+
T Consensus        80 ~~~~~~~l~~~~~~e~~~~~~~~~~~~~a~~~~D~~t~~~l~~-il~eee~h~~~l~~~L~~~~~~g~~~yl~~  152 (158)
T d2htna1          80 GEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIE-ILRDEEGHIDWLETELDLIQKMGLQNYLQA  152 (158)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence            9999999999999999999999999999999999999999999 99999999999999999999999  67443

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=99.90  E-value=5.4e-23  Score=162.94  Aligned_cols=134  Identities=12%  Similarity=0.171  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccc
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEW  151 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~  151 (239)
                      +++++.||.+++.|+.|+++|+.||.|++  ++|++++|++|+.+|.+|+.||++|++||+.+||.|.+.+.+.+     
T Consensus         5 t~t~~~L~~a~~~E~~A~~~Y~~~a~~a~--~~g~~~iA~~f~~~A~eE~~HA~~~~~~i~~lg~~p~~~~~~~~-----   77 (141)
T d1j30a_           5 TKTAENLKQGFIGESMANRRYLYFAKRAD--EEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKPIG-----   77 (141)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTTSCBCS-----
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcCcC-----
Confidence            46789999999999999999999999999  78999999999999999999999999999999999876543332     


Q ss_pred             ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        152 NTVEDLLTEALHME-KQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       152 ~s~~eale~AL~~E-k~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                       +..+.++.++..| +.++..|.+++++|...+|+.+.+||+| ++.+|.+|.+++.++|++|+
T Consensus        78 -~~~~~l~~~~~~e~~e~~~~y~~~~~~A~~e~d~~~~~~~~~-i~~~E~~H~~~f~~~l~~l~  139 (141)
T d1j30a_          78 -TLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFET-LARAEKSHAEKFQNVLKQLK  139 (141)
T ss_dssp             -SHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             -chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence             3445555555554 6799999999999999999999999999 99999999999999999986

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=99.90  E-value=6.4e-23  Score=163.78  Aligned_cols=137  Identities=13%  Similarity=0.155  Sum_probs=127.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccc
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEW  151 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~  151 (239)
                      +++++.||..+..|+.|+++|+.+|.+|+  ++|+++++++|+.+|.+|+.||.+|++|++.+||.|...  ..|. ..|
T Consensus         6 t~t~~~L~~a~~~E~~A~~~Y~~~A~~a~--~~g~~~ia~~f~~~A~eE~~HA~~l~~~l~~lg~~p~~~--~~~~-~~~   80 (146)
T d1lkoa1           6 SRTEKNILTAFAGESQARNRYNYFGGQAK--KDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAA--FPAG-IIA   80 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCCCC--CCCC-CCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCcCCC--CCcc-ccC
Confidence            46789999999999999999999999999  789999999999999999999999999999999988643  2333 368


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      .++..+++.++..|..++..|.+++++|.+++|+.+.+||+| ++.+|.+|.+++.+++.+|+
T Consensus        81 ~~~~~l~~~~~~~e~e~~~~y~~~~~~a~~~~D~~~~~~f~~-i~~~E~~H~~~f~~~l~~l~  142 (146)
T d1lkoa1          81 DTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFAS-IAVAEEFHEKRFLDFARNIK  142 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999 99999999999999999986

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=99.89  E-value=2.4e-22  Score=158.45  Aligned_cols=128  Identities=13%  Similarity=0.149  Sum_probs=116.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccccc
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNT  153 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~s  153 (239)
                      .++.||++++.|+.|+++|+.||.+++  ++|++++|++|+.+|.+|+.||.+|++|+.+|||.|.+..+..|.  .+.+
T Consensus         7 t~e~L~~a~~~E~~A~~~Yl~~A~~~~--~~g~~~ia~~f~~~A~eE~~HA~~l~~~l~~lgg~p~~~~~~~~~--~~~~   82 (135)
T d1yuza1           7 TLENLKAAIAGETGAHAKYTAFAKAAR--EQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPS--AYSC   82 (135)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC--CC--CCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh--HCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCc--CCch
Confidence            578899999999999999999999999  789999999999999999999999999999999999999998876  4777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHH
Q psy10513        154 VEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTL  206 (239)
Q Consensus       154 ~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L  206 (239)
                      ...++..++..|..++..|.++++.|.+++|+.++++|++ ++.++..|.+.+
T Consensus        83 ~~~L~~~~~~ee~e~~~~Y~~~~~~A~~~~d~~~~~~f~~-i~~~E~~H~e~F  134 (135)
T d1yuza1          83 DLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTR-AKLAESVHAERY  134 (135)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHh
Confidence            8888888888889999999999999999999999999999 888777776654

>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.66  E-value=1.7e-15  Score=119.62  Aligned_cols=124  Identities=14%  Similarity=0.097  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcccc
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEW  151 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~  151 (239)
                      +..++.||+.++.|+.|..+|+.+|..++  ++|++.+|+.|+..|.+|+.||..+++++...|+               
T Consensus         5 ~~t~~~L~~A~~gE~~A~~~Y~~~A~~a~--~~G~~~lA~~f~~~A~eE~~HA~~~~~~i~~l~~---------------   67 (133)
T d1nnqa1           5 TMTKKFLEEAFAGESMAHMRYLIFAEKAE--QEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLGK---------------   67 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC---------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh---------------
Confidence            45788999999999999999999999999  8999999999999999999999999999855432               


Q ss_pred             ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        152 NTVEDLLTEALHME-KQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       152 ~s~~eale~AL~~E-k~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                        ..+.+..++..| ..++..|.+.++.|++++|..+.++++. ++.++..|.+++.+.|..|+.
T Consensus        68 --~~~~L~~~~~~e~~e~~~~Y~e~~~~a~~egd~~~a~~f~~-i~~~E~~Ha~~f~~~l~~le~  129 (133)
T d1nnqa1          68 --TPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHY-ALEAEKIHAELYRKAKEKAEK  129 (133)
T ss_dssp             --HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred             --HHhhhHHHHHHhHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHc
Confidence              446677777877 5788999999999999999999999998 999999999999999999875

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=99.48  E-value=8e-13  Score=103.35  Aligned_cols=136  Identities=13%  Similarity=0.039  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC-C-----C-
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIE-A-----P-  146 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~-~-----p-  146 (239)
                      +.++||..|..|..+...|..+|..+.  +.+.+.++.+|...|.+|+.|+..|.+.+..+++.+...... .     . 
T Consensus         3 ~~e~L~~Ai~~E~~a~~~Y~~~a~~~~--~~~~~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
T d2oh3a1           3 LAEFLAHAIALETEAAERYVELADMME--AHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVG   80 (152)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhccccchhHH
Confidence            578999999999999999999999999  678999999999999999999999999999999876432111 0     0 


Q ss_pred             ---CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        147 ---SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       147 ---~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                         ......+..++++.|+.+|+.....|..+..   ...|+.+..++.+ ++.++.+|+.+|...+.++.+
T Consensus        81 ~~~~~~~~~~~~~~l~~Al~~E~~a~~~Y~~~a~---~~~d~~~r~~~~~-l~~~E~~H~~~l~~~l~~~~~  148 (152)
T d2oh3a1          81 DENDIHYLMTPYHALRYARDNEIRGMEYYKEAAA---NSADPEVKRLGAD-FAAEEAEHVVALDKWIEKTPR  148 (152)
T ss_dssp             CC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHH---HcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCC
Confidence               0123447999999999999998888887754   5589999999998 999999999999999988753

>d1o9ra_ a.25.1.1 (A:) Dodecameric ferritin homolog {Agrobacterium tumefaciens, Dps [TaxId: 358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Agrobacterium tumefaciens, Dps [TaxId: 358]

Probab=99.43  E-value=8.7e-12  Score=100.35  Aligned_cols=137  Identities=12%  Similarity=0.108  Sum_probs=118.4

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------c
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------L  140 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l  140 (239)
                      +-..++.++||..+...+.....|..+--+..  +.++..+..+|.+++++.++|++.+.+++..+||.|.        +
T Consensus        13 ~~~~~~~~~Ln~~La~~~~l~~k~~~~HWnv~--G~~F~~lH~~~~~~~~~~~~~~D~iAERi~~LG~~p~~~~~~~~~~   90 (162)
T d1o9ra_          13 NAKSTVIGILNESLASVIDLALVTKQAHWNLK--GPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSST   90 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcee--CCChHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHh
Confidence            34567899999999999998888887655555  7889999999999999999999999999999999994        5


Q ss_pred             CCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        141 TSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       141 ~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                      ..|+.+.. ++.+..++++..++.+..+...++++++.|.+.+|+.|.++|.. ++.+..+++=.|+.+
T Consensus        91 s~i~~~~~-~~~~~~e~l~~~l~~~~~~~~~~~~~i~~a~~~~D~~T~dll~~-i~~~~Ek~~W~l~a~  157 (162)
T d1o9ra_          91 TKLKAYPT-DIYKIHDHLDALIERYGEVANMIRKAIDDSDEAGDPTTADIFTA-ASRDLDKSLWFLEAH  157 (162)
T ss_dssp             CCSCCCCS-SCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHT
T ss_pred             ccCcCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            66766654 56789999999999999999999999999999999999999998 888777766555543

>d1tjoa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Archaeon Halobacterium salinarum [TaxId: 2242]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Archaeon Halobacterium salinarum [TaxId: 2242]

Probab=99.42  E-value=2.2e-11  Score=99.68  Aligned_cols=151  Identities=14%  Similarity=0.151  Sum_probs=127.2

Q ss_pred             CCCCCCccccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy10513         56 PDSLGKTERQTLQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRG  135 (239)
Q Consensus        56 ~~~~~~~~s~~rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RG  135 (239)
                      |...|...-.+-..-.+++++.||..+..++.....|..+.-...  +.++..+..+|.+++.+..+|+..+.++|...|
T Consensus        11 ~~~~~~~~~~l~~~~~~~~i~~Ln~~LA~~~~l~~k~~~~HWnv~--G~~F~~lH~~fee~y~~~~~~~D~iAERI~~LG   88 (180)
T d1tjoa_          11 GEVEGSDALRMDADRAEQCVDALNADLANVYVLYHQLKKHHWNVE--GAEFRDLHLFLGEAAETAEEVADELAERVQALG   88 (180)
T ss_dssp             TCCCCBTTTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            444444433334455778999999999999999999998877777  788999999999999999999999999999999


Q ss_pred             Cccc--------cCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHH
Q psy10513        136 GQLR--------LTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLA  207 (239)
Q Consensus       136 G~v~--------l~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~  207 (239)
                      |.|.        +..++.+.. ++.+..++++..++.+..+...++++++.|.+.+|+.|.++|+. +|.+..+++=.|+
T Consensus        89 g~p~~~~~~~~~~s~i~e~~~-~~~~~~eml~~ll~~~~~~i~~~~~~i~~a~e~~D~~Tadll~~-il~~~Ek~~WmL~  166 (180)
T d1tjoa_          89 GVPHASPETLQAEASVDVEDE-DVYDIRTSLANDMAIYGDIIEATREHTELAENLGDHATAHMLRE-GLIELEDDAHHIE  166 (180)
T ss_dssp             CCCCCSHHHHHHHCCSCCCCS-SBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHcCCCcccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHH
Confidence            9984        355554433 56789999999999999999999999999999999999999998 9999888876666


Q ss_pred             HHH
Q psy10513        208 DLL  210 (239)
Q Consensus       208 ~~L  210 (239)
                      .+|
T Consensus       167 s~L  169 (180)
T d1tjoa_         167 HYL  169 (180)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            554

>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus anthracis, Dlp-2 [TaxId: 1392]

Probab=99.35  E-value=6.2e-11  Score=93.41  Aligned_cols=135  Identities=16%  Similarity=0.181  Sum_probs=118.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------cCC
Q psy10513         71 HEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------LTS  142 (239)
Q Consensus        71 s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l~~  142 (239)
                      .+++++.||..++........|..+.-+..  +.++..+..+|.+++.+.++|+..+++++...||.|.        ...
T Consensus         3 ~~~~~~~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~~~e~~~~~~~~~D~iAERi~~lgg~p~~~~~~~~~~s~   80 (146)
T d1jiga_           3 KTNVVEVLNKQVANWNVLYVKLHNYHWYVT--GPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSS   80 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCccCHHHHhhcCc
Confidence            357899999999999999999988766666  7789999999999999999999999999999999985        344


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        143 IEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       143 I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      ++.+.  ...++.++++..++.+..+...++++++.|.+.+|+.|.++|.. ++.+..+++=.|+.+|
T Consensus        81 i~e~~--~~~~~~~~l~~ll~~~~~~~~~~r~~i~~a~~~~D~~t~dll~~-~~~~~Ek~~W~L~s~L  145 (146)
T d1jiga_          81 VNEGT--SKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLA-IHTTLEQHVWMLSAFL  145 (146)
T ss_dssp             SCCCC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred             Ccccc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHhhc
Confidence            55443  34579999999999999999999999999999999999999998 8988888877776544

>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Streptococcus suis [TaxId: 1307]

Probab=99.32  E-value=8.9e-11  Score=93.07  Aligned_cols=136  Identities=13%  Similarity=0.077  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------CCCC
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------TSIE  144 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~~I~  144 (239)
                      ++.++||..++........|..+--+..  +.++.++..+|.+++.++++|++.+.+++...||.|..        ..++
T Consensus         3 ~~~~~Ln~~la~~~~l~~~~~~~HWnv~--G~~F~~lH~~f~~~~~e~~~~~D~lAERi~~lGg~p~~~~~~~~~~s~i~   80 (151)
T d1umna_           3 DSKAVLNQAVADLSVAHSILHQVHWYMR--GRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLK   80 (151)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhccee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHccCc
Confidence            5678899999999999999988666565  78999999999999999999999999999999998853        3344


Q ss_pred             CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        145 APSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       145 ~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      ..+.....+..++++..++.+..+...+++++++|.+.+|+.|.+++.. ++.+..+++=.|+.+|.
T Consensus        81 e~~~~~~~~~~~ml~~~~~~~~~~~~~~~~~~~~a~~~~D~~t~dll~~-i~~~~Ek~~WmL~a~L~  146 (151)
T d1umna_          81 EVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNV-AKASIEKHIWMLQAELG  146 (151)
T ss_dssp             CCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHTT
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence            3332235578999999999999999999999999999999999999998 88888888777776653

>d1ji5a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-1 [TaxId: 1392]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus anthracis, Dlp-1 [TaxId: 1392]

Probab=99.32  E-value=7.9e-11  Score=92.45  Aligned_cols=133  Identities=19%  Similarity=0.223  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc--------ccCCCC
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQL--------RLTSIE  144 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v--------~l~~I~  144 (239)
                      ++++.||.+++........|..+--+..  +.++..+..+|.+++.+.++|+..+.+++...||.|        ....++
T Consensus         1 ~~~e~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~~H~~~~e~y~~~~~~~D~lAERi~~Lgg~p~~~~~~~~~~s~i~   78 (142)
T d1ji5a_           1 QVIEVLNKQVADWSVLFTKLHNFHWYVK--GPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQ   78 (142)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcCHHHHHhhCcCc
Confidence            3678999999999999999988755555  788999999999999999999999999999999999        356666


Q ss_pred             CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        145 APSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       145 ~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      .+.. .+ +..++++..++.+..+...++++++.|.+.+|+.|.++|.. ++.+..+++=.|+.+|
T Consensus        79 e~~~-~~-~~~~ml~~~~~~~~~~~~~~~~~~~~a~~~~D~~t~~ll~~-~~~~~ek~~W~l~s~L  141 (142)
T d1ji5a_          79 EAAY-GE-TAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLLLG-IYTELEKHAWMLRAFL  141 (142)
T ss_dssp             CCCT-TC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             ccCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHccc
Confidence            5543 33 68899999999999999999999999999999999999998 8888888776666554

>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Treponema pallidum, TpF1 [TaxId: 160]

Probab=99.29  E-value=2.5e-10  Score=90.32  Aligned_cols=135  Identities=14%  Similarity=0.125  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------CCC
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------TSI  143 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~~I  143 (239)
                      ..+.+.||..+......+..|..+--+..  +.++..+..+|.+++.+.++|++.|.+++...||.|..        ..|
T Consensus         7 ~~~~~~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~f~~~y~~~~~~~D~iAERi~~Lgg~p~~t~~~~~~~s~i   84 (151)
T d2fjca1           7 AAICEQLRQHVADLGVLYIKLHNYHWHIY--GIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGI   84 (151)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhheeee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHHHhCCC
Confidence            45889999999999999999998777777  78999999999999999999999999999999999964        455


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        144 EAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       144 ~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      +.+.. ...++.++++..++.+..+...++++++.|.+.+|+.|.++|.. ++.+..+++=.|+.+|
T Consensus        85 ~e~~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~~~D~~t~~ll~~-i~~~~Ek~~WmL~a~L  149 (151)
T d2fjca1          85 AEETE-KEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITD-ILRTLGKAIWMLGATL  149 (151)
T ss_dssp             CCCCC-CSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             Ccccc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHhHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            54443 56679999999999999999999999999999999999999998 8888888776666554

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.26  E-value=1.8e-10  Score=89.86  Aligned_cols=133  Identities=15%  Similarity=0.065  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC------
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS------  147 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~------  147 (239)
                      +.++|+..|..|..+..+|..+|..+.     -+++.++|...|.+|..|+..|.+++..+||.+.........      
T Consensus        12 l~e~l~~ai~~E~~a~~~Y~~~a~~~~-----~~~~~~~f~~la~eE~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (158)
T d2fzfa1          12 LEELLGMAIKAEIGAREFYKSLAEKIK-----IEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQP   86 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCC-----CTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccchhhhhhhhhhh
Confidence            577899999999999999999999876     367999999999999999999999999999987533222110      


Q ss_pred             ----ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        148 ----KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       148 ----~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                          .....+..++++.++..|......|..+..   ...|+.+.+++.. ++.++.+|..+|..+++.|.+
T Consensus        87 ~~~~~~~~~~~~~~l~~a~~~E~~a~~~Y~~la~---~~~d~~~~~l~~~-i~~~E~~H~~~l~~~~d~l~~  154 (158)
T d2fzfa1          87 VARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEE---MVKEEEKKRLMRY-LADMERGHYYTLRAEYELLLN  154 (158)
T ss_dssp             CCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH---TSCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHH---hcCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhC
Confidence                012246889999999999999998887654   5589999999998 999999999999999888765

>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus brevis, Dps [TaxId: 1393]

Probab=99.22  E-value=1.1e-09  Score=86.31  Aligned_cols=137  Identities=15%  Similarity=0.159  Sum_probs=115.7

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------  140 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------  140 (239)
                      +..+.+..+||..++.....+..|..+--+..  +.++.++..+|.+++.+..+|++.+.+++...||.|..        
T Consensus         4 ~~~~~~~~~Ln~~lA~~~~l~~~~~~~HWnv~--G~~F~~lH~~~ee~y~e~~~~~D~iAERi~~Lgg~p~~~~~~~~~~   81 (149)
T d1n1qa_           4 SIQQLVAVLLNRQVANWVVLYVKLHNFHWNVN--GPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEE   81 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhhcee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCccHHHHHhh
Confidence            34567888999999998888888877555555  77899999999999999999999999999999999853        


Q ss_pred             CCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        141 TSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       141 ~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      ..++.+..  ..+..++++..++.+..+...++++++.|.+.+|+.|.++|.. ++.+..+++=.|+.+|
T Consensus        82 s~i~e~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~D~~t~dll~~-i~~~~Ek~~W~L~a~L  148 (149)
T d1n1qa_          82 ASIKEATG--GESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDA-IEAGLEKHVWMLEAFL  148 (149)
T ss_dssp             CCSCCCCS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CCCccccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHhhc
Confidence            44554442  4578999999999999999999999999999999999999998 8888777766666554

>d1ji4a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter pylori, Nap [TaxId: 210]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Helicobacter pylori, Nap [TaxId: 210]

Probab=99.20  E-value=9.4e-10  Score=86.43  Aligned_cols=133  Identities=18%  Similarity=0.193  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------cCCCCC
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------LTSIEA  145 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l~~I~~  145 (239)
                      ..+.||..++....-...|..+--...  +.++..+..+|.+++.+..+|+..+.+++...||.|.        ...++.
T Consensus         3 ~~~~L~~~lA~~~~l~~~~~~~HWnv~--G~~F~~lH~~f~e~y~~~~~~~D~iAERi~~LG~~p~~~~~~~~~~s~i~~   80 (144)
T d1ji4a_           3 TFEILKHLQADAIVLFMKVHNFHWNVK--GTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKE   80 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHhcCCcc
Confidence            467899998888888877777655555  7889999999999999999999999999999999984        245555


Q ss_pred             CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        146 PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       146 p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      +.. .+.++.++++..++.+..+...++++++.|.+.+|+.|.++|.. ++.+..+++=.|+.+|
T Consensus        81 ~~~-~~~~~~~ml~~l~~~~~~~~~~~~~~~~~a~~~~D~~t~~ll~~-~~~~~ek~~W~L~s~L  143 (144)
T d1ji4a_          81 ETK-TSFHSKDIFKEILEDYKYLEKEFKELSNTAEKEGDKVTVTYADD-QLAKLQKSIWMLQAHL  143 (144)
T ss_dssp             CCC-CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred             cCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHhhc
Confidence            543 56789999999999999999999999999999999999999998 8887777665555443

>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Listeria innocua [TaxId: 1642]

Probab=99.10  E-value=3.8e-09  Score=83.21  Aligned_cols=135  Identities=16%  Similarity=0.162  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--------CCCCC
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL--------TSIEA  145 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l--------~~I~~  145 (239)
                      +.+.||..+.....-...|..+--...  +.++..+..+|.+++.+..+|+..+.+++...||.|..        ..|+.
T Consensus         3 ~~e~L~~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~~e~~y~~~~~~~D~iAERi~~Lg~~p~~~~~~~~~~s~i~e   80 (150)
T d2bk6a1           3 TKEFLNHQVANLNVFTVKIHQIGWYMR--GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEE   80 (150)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHccCcc
Confidence            467888888877777777765433333  78999999999999999999999999999999998853        34444


Q ss_pred             CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        146 PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       146 p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      .+.....++.++++..+..+..+...+++++++|.+.+|+.|.++|.. ++.+..+.+=.|+.+|.
T Consensus        81 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~~~D~~t~dll~~-i~~~~Ek~~W~L~a~L~  145 (150)
T d2bk6a1          81 APYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIA-FKASIDKHIWMFKAFLG  145 (150)
T ss_dssp             CCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHTT
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence            333346689999999999999999999999999999999999999998 88888887777776553

>d1dpsa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Escherichia coli, Dps [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Escherichia coli, Dps [TaxId: 562]

Probab=99.04  E-value=9.9e-09  Score=82.01  Aligned_cols=136  Identities=12%  Similarity=0.090  Sum_probs=109.3

Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-------
Q psy10513         67 LQNFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR-------  139 (239)
Q Consensus        67 rqn~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~-------  139 (239)
                      ...-.+.+.++||..+.....-...|...--...  +.++..+..+|.+++.+.++|+..|.++|...||.|.       
T Consensus        14 ~~~~~~~~~~~L~~~la~~~~L~~~~~~~HWnv~--G~~F~~lH~~fee~y~e~~~~~D~iAERI~~Lgg~p~~~~~~~~   91 (159)
T d1dpsa_          14 SDSEKKATVELLNRQVIQFIDLSLITKQAHWNMR--GANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVIN   91 (159)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccee--CCCHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence            3445677889999999888888888776554444  7789999999999999999999999999999999983       


Q ss_pred             -cCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHH
Q psy10513        140 -LTSIEAPSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADL  209 (239)
Q Consensus       140 -l~~I~~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~  209 (239)
                       +..++.++ ....+..++++..++.++.+...++++   |.+.+|+.|.++|.. ++.+..+++=.|+.+
T Consensus        92 ~~s~i~e~~-~~~~~~~~~l~~l~~~~~~~i~~~r~~---a~~~~D~~T~dll~~-~l~~~Ek~~WmL~s~  157 (159)
T d1dpsa_          92 SKTPLKSYP-LDIHNVQDHLKELADRYAIVANDVRKA---IGEAKDDDTADILTA-ASRDLDKFLWFIECN  157 (159)
T ss_dssp             HHCCSCCCC-SSCCBHHHHHHHHHHHHHHHHHHHHHH---HHHCCSHHHHHHHHH-HHHHHHHHHHHHHHT
T ss_pred             hhCCCCCCC-CccccHHHHHHHHHHHHHHHHHHHHHH---HHHcCCHhHHHHHHH-HHHHHHHHHHHHHhh
Confidence             23444333 256689999999999999988777765   456789999999998 999888877666543

>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Rv2844-like
domain: Hypothetical protein Rv2844
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.01  E-value=1.7e-08  Score=78.77  Aligned_cols=128  Identities=14%  Similarity=0.121  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccccccH
Q psy10513         75 IDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSKQEWNTV  154 (239)
Q Consensus        75 e~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~~~~~s~  154 (239)
                      ..+||..|..|+.+.|.|-..+.+++      ++....|.....+|+.|+..|.+.+..+||.+............+++.
T Consensus         7 ~~~L~~AL~~E~aaiy~Y~~a~~~~~------~~~~~~~~~~~~~e~~H~~~L~~~i~~lgg~p~~~~~~~~~~~~~td~   80 (142)
T d2ib0a1           7 NAALCDALAVEHATIYGYGIVSALSP------PGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSA   80 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSC------GGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCSSCCCSH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccCCCCCCH
Confidence            47899999999999999987776665      457888999999999999999999999999987654332222257789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        155 EDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       155 ~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                      .++++.++..|+.....|+.+...   ..|+.++.++.. ++.++..|...++..+..
T Consensus        81 ~~~l~~a~~~E~~a~~~Y~~~~~~---~~d~~~r~la~~-il~~ea~ha~~~r~~~~~  134 (142)
T d2ib0a1          81 ADAARLAVRMENDGATAWRAVVEH---AETADDRVFAST-ALTESAVMATRWNRVLGA  134 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---CCSHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh---cCCHHHHHHHHH-HHHHHHHHHHHHHHhcCC
Confidence            999999999999999999988765   479999999998 999999999999887753

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=98.95  E-value=2.2e-08  Score=77.35  Aligned_cols=129  Identities=12%  Similarity=0.107  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--------
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEA--------  145 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~--------  145 (239)
                      +.+.|+..|..|..+...|..++..++      +.+...|...|.+|+.|+..|..++..+|+.+.......        
T Consensus         7 ~~e~l~~Ai~~E~~~~~~Y~~~a~~~~------~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
T d1vjxa_           7 VSDILTVAIRLEEEGERFYRELSEHFN------GEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFP   80 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCC------SHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTCBCCSBCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHhhhhhhh
Confidence            567899999999999999999877663      458899999999999999999999999987653322111        


Q ss_pred             C----CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy10513        146 P----SKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTT  212 (239)
Q Consensus       146 p----~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~  212 (239)
                      +    ......+..++++.|+..|+.....|..+..   ...|+.+..++.+ ++.++.+|++.|..+...
T Consensus        81 ~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~l~~---~~~d~~~r~~~~~-i~~eE~~H~~~l~~l~~~  147 (149)
T d1vjxa_          81 DTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKD---GLVNSDAQKTVKK-IIDQEKEHLRKLLEMKRE  147 (149)
T ss_dssp             CCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHHH---HCCSHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence            0    1123457899999999999999999987755   5589999999998 999999999999987653

>d2yw6a1 a.25.1.1 (A:17-157) Dodecameric ferritin homolog {Mycobacterium smegmatis [TaxId: 1772]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Mycobacterium smegmatis [TaxId: 1772]

Probab=98.89  E-value=1.3e-07  Score=73.53  Aligned_cols=132  Identities=13%  Similarity=-0.010  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------cCCCCC
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------LTSIEA  145 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l~~I~~  145 (239)
                      |.+.||.++.....-...+...--...  +.++.++..+|.+++.+..+|+..+.+++...||.|.        ...++.
T Consensus         1 v~~~L~~~La~~~~L~~~~~~~HWnv~--G~~F~~~H~~fee~y~~~~~~~D~iAERi~~Lg~~p~~~~~~~~~~s~~~~   78 (141)
T d2yw6a1           1 VADLLQKQLSTYNDLHLTLKHVHWNVV--GPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDD   78 (141)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcccccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHcCCCc
Confidence            457788888887666665555433333  6789999999999999999999999999999999883        344554


Q ss_pred             CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHH
Q psy10513        146 PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLL  210 (239)
Q Consensus       146 p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L  210 (239)
                      ++. .+.++.++++..++.+..+...++++++.|.+ +|+.|.+||.. ++.+..+.+=.|+.+|
T Consensus        79 ~~~-~~~~~~~~l~~l~~~~~~~~~~~r~~~~~a~~-~D~~T~dll~~-~~~~~ek~~WmL~a~L  140 (141)
T d2yw6a1          79 YSV-ERDTVQAHLAALDLVYNGVIEDTRKSIEKLED-LDLVSQDLLIA-HAGELEKFQWFVRAHL  140 (141)
T ss_dssp             CCC-CSEEHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             cCC-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCHHHHHHHHH-HHHHHHHHHHHHHhhc
Confidence            442 56789999999999999999999999999975 79999999998 8877777766665544

>d1zuja1 a.25.1.1 (A:6-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsA [TaxId: 1358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Lactococcus lactis, DpsA [TaxId: 1358]

Probab=98.56  E-value=3.2e-06  Score=68.14  Aligned_cols=133  Identities=11%  Similarity=0.039  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------cCCCC
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------LTSIE  144 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l~~I~  144 (239)
                      ...+.||..+..-+.....+.. ..|.-+   | ++|-.+|..+..+..++...+.+++...|+.|.        ...|+
T Consensus        21 tagamln~vLAn~~vl~~K~~~-~HWnV~---G-~~FH~~fee~y~~~~~~~D~iAEri~~lG~~~~~t~~e~~~~s~i~   95 (168)
T d1zuja1          21 TAGAMLSHVLSNIFYEKISLMQ-AGLYAK---S-ANYRIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHKFI   95 (168)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHH-HHHHCS---S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc-ceeeee---C-cHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHccCc
Confidence            3556788888776665555555 444432   3 567889999999999999999999999999873        34444


Q ss_pred             C-CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        145 A-PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       145 ~-p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                      . +...++-+..++++..+..-..+...+++++.+|.+++|+.|.++|.. ++.+..+.+-.|+.+|.
T Consensus        96 E~~~~~~~~s~~~ml~~li~d~~~~~~~~~~~i~~A~~~~D~~t~~~l~~-~l~~~ek~iWmL~a~LG  162 (168)
T d1zuja1          96 ENDPKAKYWTDEALIENFINDFQNQNLFIGRAIKLAQKEEKFSLELAIRK-LYGYNLSIIPYFAGELG  162 (168)
T ss_dssp             CCCTTGGGSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHT
T ss_pred             ccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence            2 222245689999999999999999999999999999999999999998 99999999888887664

>d1zs3a1 a.25.1.1 (A:3-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsB [TaxId: 1358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Lactococcus lactis, DpsB [TaxId: 1358]

Probab=98.56  E-value=3.1e-06  Score=68.49  Aligned_cols=132  Identities=13%  Similarity=0.071  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--------cCCCCC
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLR--------LTSIEA  145 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~--------l~~I~~  145 (239)
                      ..++||..++.-+.....+.. ..|+-+   | +.+..||.+++++..++...+.+++...||.|.        +..|+.
T Consensus        25 a~amLn~lLAn~~vl~~K~~~-~HWnv~---G-~~lH~~fee~y~~~~~~~D~iAEri~~lG~~p~~t~~e~~e~s~i~e   99 (171)
T d1zs3a1          25 AGAMLGHVLSNLFIENIRLTQ-AGIYAK---S-PVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKFIT   99 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHHHCS---S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHc-CceeeE---C-hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCccHHHHHHHccCcc
Confidence            456688877665555544444 555542   3 468999999999999999999999999999884        345543


Q ss_pred             -CCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHH
Q psy10513        146 -PSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLT  211 (239)
Q Consensus       146 -p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~  211 (239)
                       +...++-+..++++..+..-+.+...+++.+++|.+++|+.|.++|.. ++.+..+.+-.|+.+|.
T Consensus       100 ~~~~~~~~s~~eml~~Lv~d~~~~~~~~~~~i~~A~~e~D~~tadll~d-~~~~~eK~iWmL~a~Lg  165 (171)
T d1zs3a1         100 EDPKAKYWTDEDLLESFIVDFQAQNMFITRAIKLANKEEKFALAAGVVE-LYGYNLQVIRNLAGDLG  165 (171)
T ss_dssp             CCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHC
Confidence             222245689999999999999999999999999999999999999998 99999999888877654

>d1jkva_ a.25.1.3 (A:) Manganese catalase (T-catalase) {Lactobacillus plantarum [TaxId: 1590]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Manganese catalase (T-catalase)
domain: Manganese catalase (T-catalase)
species: Lactobacillus plantarum [TaxId: 1590]

Probab=97.48  E-value=0.0023  Score=54.53  Aligned_cols=137  Identities=11%  Similarity=0.162  Sum_probs=105.3

Q ss_pred             hHHHHHHHHHHHH---HHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc-------
Q psy10513         71 HEDCIDKINTQIN---DEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRL-------  140 (239)
Q Consensus        71 s~eve~~LN~qIn---~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l-------  140 (239)
                      ++..-++|-+|+.   -||.|+.+|+..++-|.    +-..+...|...+.||+.|.+-|..-|.++...+..       
T Consensus        18 dP~~A~~L~e~~GG~~GElsa~~qYl~Q~~~~~----~~~~~~dll~dIatEEl~HlEmvat~I~~Ll~~~~~~~~~~~~   93 (266)
T d1jkva_          18 DPIMARRLQESLGGQWGETTGMMSYLSQGWAST----GAEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKR   93 (266)
T ss_dssp             CHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHCC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHH
T ss_pred             CHHHHHHHHHHhCCCchHHHHHHHHHHHHhcCC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhhccc
Confidence            4455566666663   69999999999998775    234588999999999999999998887766332211       


Q ss_pred             ------------------CCCC-CCC---cccc--------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q psy10513        141 ------------------TSIE-APS---KQEW--------NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDF  190 (239)
Q Consensus       141 ------------------~~I~-~p~---~~~~--------~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~F  190 (239)
                                        .... .|.   -.-|        +++..-|...++.|......+.+|+++.   .|+..++.
T Consensus        94 ~~~~~~~~~G~~p~~~~~~g~g~~~~ds~G~pWt~~Yv~~~Gnl~~DL~~NiaAE~~Ar~~Y~rl~~~t---dDp~vk~~  170 (266)
T d1jkva_          94 DPSLATTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMT---EDEGVRDM  170 (266)
T ss_dssp             CTTHHHHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC---CCHHHHHH
T ss_pred             chhHHHHhcCCCcceeeeccCcccccCCCCCCCCccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhc---CChhHHHH
Confidence                              0000 110   0124        4599999999999999999999998754   89999999


Q ss_pred             hHHHhHHHHHHHHHHHHHHHHHHhh
Q psy10513        191 LEGRYLQEQVDAIKTLADLLTTVRR  215 (239)
Q Consensus       191 Le~~fL~EQve~i~~L~~~L~~L~~  215 (239)
                      |.. ++.+++-|...+...|..|.-
T Consensus       171 L~f-L~~rE~~H~~~f~~aLe~l~~  194 (266)
T d1jkva_         171 LKF-LLARETQHQLQFMKAQEELEE  194 (266)
T ss_dssp             HHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHhcc
Confidence            998 999999999999999998864

>d2cwla1 a.25.1.3 (A:1-299) Manganese catalase (T-catalase) {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Manganese catalase (T-catalase)
domain: Manganese catalase (T-catalase)
species: Thermus thermophilus [TaxId: 274]

Probab=97.25  E-value=0.0067  Score=52.32  Aligned_cols=139  Identities=12%  Similarity=0.130  Sum_probs=107.4

Q ss_pred             hHHHHHHHHHHH---HHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCccccCCCC--
Q psy10513         71 HEDCIDKINTQI---NDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK-RGGQLRLTSIE--  144 (239)
Q Consensus        71 s~eve~~LN~qI---n~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~-RGG~v~l~~I~--  144 (239)
                      ++..-++|.+|+   .-||.|+.+|+..++.|.. ...++-+...+...+.||+.|.+-|..-|.. ++|.+.-..-.  
T Consensus        19 dP~~A~~l~e~~GG~~GEmsa~mqYl~Q~~~~~~-~~~~~~~~dll~dIatEEl~HlEmvat~I~~Ll~~~p~~~~~~~~   97 (299)
T d2cwla1          19 DPNAAAAVQALLGGRFGEMSTLMNYMYQSFNFRG-KKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGV   97 (299)
T ss_dssp             CHHHHHHHGGGTTSTTSHHHHHHHHHHHHHHCSC-TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCSCCCCC
T ss_pred             CHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCCC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHhhcc
Confidence            344455566665   4799999999999998874 2356779999999999999999999888865 45443210000  


Q ss_pred             --------------------------CCC-c--ccc--------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH
Q psy10513        145 --------------------------APS-K--QEW--------NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL  187 (239)
Q Consensus       145 --------------------------~p~-~--~~~--------~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t  187 (239)
                                                .|. .  .-|        +++..-|...++.|......+..|+...   .|+..
T Consensus        98 dp~~~~~~~~~~~~n~~h~i~~g~g~~~~ds~G~pWt~~Yv~~sGnl~aDL~~Ni~aE~~Ar~~y~rl~~~t---dDp~v  174 (299)
T d2cwla1          98 DPESAPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMT---DNPVA  174 (299)
T ss_dssp             CGGGCTTGGGGSSSCSHHHHTSSSSCCSBCTTSCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC---CCHHH
T ss_pred             CchhhHHHhhhccCChhhhhccCCCCCccCCCCCcCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc---CCccH
Confidence                                      000 0  024        3699999999999999999999998865   89999


Q ss_pred             HHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        188 TDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       188 ~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      ++.|.. ++...+-|...+...|..|.
T Consensus       175 kd~L~f-Li~RE~~H~~~f~~ALe~l~  200 (299)
T d2cwla1         175 REMIGY-LLVRGGVHAAAYGKALESLT  200 (299)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence            999998 99999999999999999996

>d1zpya1 a.25.1.5 (A:4-94) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: half-ferritin
domain: Hypothetical protein NE0167
species: Nitrosomonas europaea [TaxId: 915]

Probab=96.41  E-value=0.012  Score=42.19  Aligned_cols=57  Identities=19%  Similarity=0.292  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRG  135 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RG  135 (239)
                      ++..++...| .||.|.+.|..++..++     -+.+-+.|...++||.+||-.|+++|..+.
T Consensus        16 d~~Rai~sli-~EleAI~~Y~q~a~~t~-----d~~~k~Vl~hia~EEkeH~g~~LelLrr~D   72 (91)
T d1zpya1          16 DMHRAIISLR-EELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRCD   72 (91)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            4556666555 89999999999999998     467889999999999999999999998765

>d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Possible acyl-[acyl-carrier protein] desaturase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.04  E-value=0.17  Score=42.57  Aligned_cols=162  Identities=14%  Similarity=0.049  Sum_probs=103.4

Q ss_pred             cCCCCCCCCCCCCCCCCcccc--c-----hh-hchHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHH
Q psy10513         45 SSEPTQSSQHSPDSLGKTERQ--T-----LQ-NFHEDCIDKIN-TQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTH  115 (239)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~s~--~-----rq-n~s~eve~~LN-~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~  115 (239)
                      +.+.=|.+|--|++.|.....  +     ++ .++.....+|- ..|..+=-.+|+ ..++.+|..+    +++++|.+.
T Consensus        21 ~~~~W~p~d~lP~~~~~~f~~~~~~~~~~~~~~l~~~~~~alv~~lltEdnLP~Y~-~~l~~~f~~d----~~w~~wv~~   95 (267)
T d1za0a1          21 TEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHH-RELVEHFILE----DWWGRWLGR   95 (267)
T ss_dssp             TCCCCCGGGGCCGGGCCCCGGGTSCCCCGGGCCSCHHHHHHHHHHHHHHHC--------------------CHHHHHHHH
T ss_pred             hhhccCccccCCCCCCCCccccCcccCChhhccCchhHHHHHHhhhhcccCCcHHH-HHHHHHhccc----hHHHHHHhc
Confidence            444556677778777766521  1     22 46666644443 333333222222 2334455533    489999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc--------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH
Q psy10513        116 SYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPSK--------QEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANL  187 (239)
Q Consensus       116 ~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~~--------~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t  187 (239)
                      -..||-.|+.-|-+|+.- -|.|....+..-..        ....++...|-...-.|+...-.+..+.   ...+|+.+
T Consensus        96 WtaEEnrHg~aL~~YL~l-sg~vDp~~~e~~~~~~~~~G~~~~~~~p~~~l~y~~fqE~aT~i~h~nla---~~~~dPvL  171 (267)
T d1za0a1          96 WTAEEHLHAIALREYLVV-TREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLA---AQIEEPIL  171 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HTCSCTTTTTCTTC----------CCCHHHHHHHHHHHHHHHHHHHHHHH---HHCCSHHH
T ss_pred             ccHHHhhHHHHHHHHHHH-hccCChhHhHHHHHHHHHhccCCCCCchHHHHHHHHHHHhHHHHHHHHHH---HHcCCHHH
Confidence            999999999999999944 45666555543211        1234688888888888888777777654   45689999


Q ss_pred             HHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        188 TDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       188 ~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      ...+.. +-.++..|.....+++..+-.+
T Consensus       172 ~~i~~r-IA~DE~rH~~fy~~~v~~~le~  199 (267)
T d1za0a1         172 AGLIDR-IARDEVRHEEFFANLVTHCLDY  199 (267)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence            999997 9999999999999999887554

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=95.47  E-value=0.04  Score=40.74  Aligned_cols=60  Identities=12%  Similarity=0.201  Sum_probs=55.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      |+.++|..|+.+|+.....|..+...+...++..+..++.. +-.++.+|.+.+..++..+
T Consensus         2 t~~e~L~~Ai~~E~~a~~~Y~~~a~~~~~~~~~~~~~~f~~-la~eE~~H~~~l~~~~~~~   61 (152)
T d2oh3a1           2 TLAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRD-MARFSTLHGDEIKQRSRAL   61 (152)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999999998 9999999999998776654

>d1afra_ a.25.1.2 (A:) delta 9-stearoyl-acyl carrier protein desaturase {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: delta 9-stearoyl-acyl carrier protein desaturase
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=93.80  E-value=1.3  Score=38.22  Aligned_cols=167  Identities=16%  Similarity=0.136  Sum_probs=116.0

Q ss_pred             cCCCCCCCCCCCCCCCCccc-cc------hhhchHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccCC---ccchhHHHHH
Q psy10513         45 SSEPTQSSQHSPDSLGKTER-QT------LQNFHEDC-IDKINTQINDEIRSAYTYISMASFCTQDN---VALFGFAKFF  113 (239)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~s-~~------rqn~s~ev-e~~LN~qIn~EL~As~~YlsmA~~f~~~~---v~l~G~A~fF  113 (239)
                      +.+-=|..|--|++.|.... .+      ...++..+ ..++-+.|..|---+|+-.. +.+|.-++   ..-.+.+.|.
T Consensus        40 v~~~WqPhD~lP~~~~~~F~~~~~e~~~~a~~lpd~~~v~lv~nllTEd~LPtY~~~l-~~~~g~~d~~g~~~~~W~~Wv  118 (345)
T d1afra_          40 VEKCWQPQDFLPDPASDGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQTML-NTLDGVRDETGASPTSWAIWT  118 (345)
T ss_dssp             GGGSCCGGGGSCCTTSTTHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTHHHHHHHH-TTSTTTCCSSSSCCSHHHHHH
T ss_pred             hhhccCCcccCCCCccCCcchhccccchhhccCCHHHHHHHHHhhhccccCchHHHHH-HHHhccccccCCCCcchhhhc
Confidence            44456777778998887642 11      12466655 45555666666555555333 23332111   1334699999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccccCCCC-----------CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q psy10513        114 THSYKEEIEHMEHLIAYLNKRGGQLRLTSIE-----------APSKQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQH  182 (239)
Q Consensus       114 ~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~-----------~p~~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~  182 (239)
                      .....||-.|+.-|-+|+..-| .|+...+.           .|.  .-.++...|-..--.|+...-...++.++|.+.
T Consensus       119 ~~WTAEEnRHg~aLr~YL~vsr-~VDp~~lE~~~~~~~~~G~~~~--~~~~p~~~~vY~sfQE~AT~vsh~nt~~~a~e~  195 (345)
T d1afra_         119 RAWTAEENRHGDLLNKYLYLSG-RVDMRQIEKTIQYLIGSGMDPR--TENSPYLGFIYTSFQERATFISHGNTARQAKEH  195 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHHCCCCS--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccccchHHHHHHHHHHHhC-CCChHHHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHHHHhHhhhHHHHHHHHHhc
Confidence            9999999999999999996533 34322221           221  123677777777778887777888899999999


Q ss_pred             CChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhhH
Q psy10513        183 GDANLTDFLEGRYLQEQVDAIKTLADLLTTVRRT  216 (239)
Q Consensus       183 ~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~~  216 (239)
                      +|+.+...+.. +=.++..|.....+++..+=.+
T Consensus       196 gDPvL~~I~~r-IA~DE~rH~~fY~~~v~~~Le~  228 (345)
T d1afra_         196 GDIKLAQICGT-IAADEKRHETAYTKIVEKLFEI  228 (345)
T ss_dssp             TCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999998 9999999999999998887554

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.77  E-value=0.14  Score=37.59  Aligned_cols=59  Identities=19%  Similarity=0.103  Sum_probs=51.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      -++.++|+.|+.+|+.....|..+...   .+|+.+.+++.+ +..++.+|.+.+..++..+.
T Consensus        10 ~~l~e~l~~ai~~E~~a~~~Y~~~a~~---~~~~~~~~~f~~-la~eE~~H~~~~~~~~~~~~   68 (158)
T d2fzfa1          10 FSLEELLGMAIKAEIGAREFYKSLAEK---IKIEALKEKINW-LAEEEKKHEALLRKLYSQMF   68 (158)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHS---CCCTTHHHHHHH-HHHHTHHHHHHHHHHHHHHS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHH---CCChhHHHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence            358999999999999999999877764   478889999998 99999999999998876653

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=90.71  E-value=0.69  Score=33.56  Aligned_cols=55  Identities=16%  Similarity=0.127  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLN  132 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~  132 (239)
                      .+.++|...|..|..+...|..++..+.     -+.+...|...+.+|+.|...|.++.-
T Consensus        92 ~~~~~l~~ai~~E~~a~~~Y~~l~~~~~-----d~~~r~~~~~i~~eE~~H~~~l~~l~~  146 (149)
T d1vjxa_          92 TLKEVLDIAISVEKDSIILYYELKDGLV-----NSDAQKTVKKIIDQEKEHLRKLLEMKR  146 (149)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4578899999999999999999998776     467899999999999999999988764

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.19  E-value=1.2  Score=32.22  Aligned_cols=63  Identities=14%  Similarity=0.149  Sum_probs=56.9

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        151 WNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       151 ~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      .++.++-|..|+..|-.....|.....+|...+.+.+..++.. .-.++.+|...+..+|..+.
T Consensus         4 ~~~t~e~L~~a~~~E~~A~~~Yl~~A~~~~~~g~~~ia~~f~~-~A~eE~~HA~~l~~~l~~lg   66 (135)
T d1yuza1           4 VGSTLENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEA-TAAAELIHIGLEYALVAEME   66 (135)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCChHHHHHHHH-HHHHHHHHHHHHHHHHHhcC
Confidence            3567899999999999999999999999999999999999998 89999999999998888763

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.16  E-value=0.62  Score=34.28  Aligned_cols=60  Identities=13%  Similarity=0.166  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         72 EDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNK  133 (239)
Q Consensus        72 ~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~  133 (239)
                      ..+..++...+..|..+.-.|-.++..+.  ..+-...+.||.....+|..|+..|-+++-.
T Consensus        81 ~~~~~l~~~~~~~e~e~~~~y~~~~~~a~--~~~D~~~~~~f~~i~~~E~~H~~~f~~~l~~  140 (146)
T d1lkoa1          81 DTHANLIASAAGEHHEYTEMYPSFARIAR--EEGYEEIARVFASIAVAEEFHEKRFLDFARN  140 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34557777788888899999999999998  5688999999999999999999999888754

>d2itba1 a.25.1.7 (A:3-201) Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Pseudomonas putida [TaxId: 303]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: MiaE-like
domain: Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188
species: Pseudomonas putida [TaxId: 303]

Probab=87.27  E-value=5.7  Score=31.37  Aligned_cols=151  Identities=19%  Similarity=0.279  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC-----
Q psy10513         73 DCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS-----  147 (239)
Q Consensus        73 eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~-----  147 (239)
                      .....|.++.+-|-.|+..=++|-+.|.    ..+.+..-+-..|.||+.|-+.+++-+..||...  ..+.+..     
T Consensus        24 ~~~~~L~DHA~cEkKAA~~Alsli~rYp----~~~~Lv~~m~~La~EEL~HF~qV~~im~~Rgi~l--~~~~~~~Ya~~L   97 (199)
T d2itba1          24 DQETLLIDHKNCEFKAASTALSLIAKYN----THLDLINMMSRLAREELVHHEQVLRLMKRRGVPL--RPVSAGRYASGL   97 (199)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CCCCCCSHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CCCCccHHHHHH
Confidence            3568899999999999999888877775    4788999999999999999999999999999654  3444322     


Q ss_pred             -----ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHhh---HH--
Q psy10513        148 -----KQEWNTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVRR---TQ--  217 (239)
Q Consensus       148 -----~~~~~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~~---~g--  217 (239)
                           .....-.++.|=.+--.|-.--+++.   -+|..- |..+..|-.. ++.-+..|-...-++-...-.   +.  
T Consensus        98 ~~~~r~~~~~~llD~Llv~AlIEARScERF~---lLa~~l-d~eL~~FY~~-L~~SEarH~~~yl~LA~~~~~~~~V~~R  172 (199)
T d2itba1          98 RRLVRAHEPVKLVDTLVVGAFIEARSCERFA---ALVPHL-DEELGRFYHG-LLKSEARHYQGYLKLAHNYGDEADIARC  172 (199)
T ss_dssp             HTTSCSSTTHHHHHHHHHHHHHHHHHHHHHH---HHGGGS-CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred             HHHccCCChHHHHHHHHHHHHHhhhHHhHHH---HHHhhC-CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCHhHHHHH
Confidence                 01111233433333333433333333   334444 8899999998 998888887666555444421   11  


Q ss_pred             --HH-HHHHHhcCC---CCCCCC
Q psy10513        218 --LY-LVDRDLMSG---KFSMHG  234 (239)
Q Consensus       218 --~y-lfDk~L~~~---k~~~~~  234 (239)
                        .+ -++.++.++   .+-||.
T Consensus       173 l~~ll~~Eaeli~~~d~~~R~HS  195 (199)
T d2itba1         173 VELVRAAEMELIQSPDQELRFHS  195 (199)
T ss_dssp             HHHHHHHHHHHHHSEESSCCTTC
T ss_pred             HHHHHHHHHHHHcCCCCCCccCC
Confidence              22 366666653   266663

>d2gyqa1 a.25.1.4 (A:1-160) Hypothetical ptotein RPA3308 {Rhodopseudomonas palustris [TaxId: 1076]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: YciF-like
domain: Hypothetical ptotein RPA3308
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=86.03  E-value=5.7  Score=30.15  Aligned_cols=133  Identities=20%  Similarity=0.148  Sum_probs=97.8

Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC-
Q psy10513         69 NFHEDCIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLNKRGGQLRLTSIEAPS-  147 (239)
Q Consensus        69 n~s~eve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~~RGG~v~l~~I~~p~-  147 (239)
                      ++..-.+..|.+....|-++--.--.|+.-..     .|.+..-|..+..+-..|+.+|-.-+-..|..|.-..-..-. 
T Consensus        10 tl~dlfi~~L~d~y~aE~q~~~al~~m~~~a~-----~peLk~~l~~H~~eT~~qi~rLe~i~~~lg~~p~~~~c~am~g   84 (160)
T d2gyqa1          10 TMEDLLLHGLRDIYYAEQQITKALPKMIEQAT-----NRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIDG   84 (160)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccHHHHH
Confidence            34555677778888888777776666766554     599999999999999999999999999999876321111000 


Q ss_pred             --------ccccc--cHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHH
Q psy10513        148 --------KQEWN--TVEDL--LTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLA  207 (239)
Q Consensus       148 --------~~~~~--s~~ea--le~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~  207 (239)
                              ...+.  .++++  +-.+...|..-...|..|+.+|..-++......|+. -|+|+..--++|.
T Consensus        85 li~e~~~~~~~~~~~~v~Da~li~aaq~~EHyEIA~YgtL~a~A~~lG~~~~a~lL~~-~L~EE~~~d~~Lt  155 (160)
T d2gyqa1          85 LIKEADETAGEIADKTVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTT-NLNEEKAANTKLN  155 (160)
T ss_dssp             HHHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHH
Confidence                    01222  35554  346678899999999999999999999999999987 7877766555544

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=85.90  E-value=2.3  Score=31.24  Aligned_cols=61  Identities=11%  Similarity=0.026  Sum_probs=52.5

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHHh
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTVR  214 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L~  214 (239)
                      .++++|..+++.|-.....|...+.++...+-..+..|+.. --.++.+|..++...|..+.
T Consensus         6 ~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~~~~~~~la~~f~~-~a~eE~~Ha~~l~eri~~lG   66 (158)
T d2htna1           6 KVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYH-ESIDEMKHADRYIERILFLE   66 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcC
Confidence            48899999999999999999999999988888888888887 67778888888888776653

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=85.30  E-value=1.5  Score=32.98  Aligned_cols=57  Identities=14%  Similarity=0.135  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10513         74 CIDKINTQINDEIRSAYTYISMASFCTQDNVALFGFAKFFTHSYKEEIEHMEHLIAYLN  132 (239)
Q Consensus        74 ve~~LN~qIn~EL~As~~YlsmA~~f~~~~v~l~G~A~fF~~~A~EE~eHA~kLi~yl~  132 (239)
                      +.+.|...+..|..+.-.|..++..+.  ..+=++...||.....+|.+|+..|-+.+.
T Consensus        85 ~~e~l~~~l~~E~~~~~~y~~~~~~A~--~~~D~~t~~~l~~il~eE~~H~~~~e~~l~  141 (169)
T d1nf4a_          85 VPVIYESDADQEDATIEAYSQFLKVCK--EQGDIVTARLFERIIEEEQAHLTYYENIGS  141 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345678889999999999999999998  567889999999999999999977766553

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.44  E-value=3  Score=30.42  Aligned_cols=60  Identities=12%  Similarity=-0.012  Sum_probs=53.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .+++.|..++..|-.....|......+...+-..+..|+.. .-.++.+|..++...|..+
T Consensus         6 ~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~~~~~~~la~~f~~-~a~eE~~Ha~~l~~~i~~l   65 (154)
T d2fkza1           6 IVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYH-ESIDEMKHADKLIKRILFL   65 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999998888999999987 7888889999988877765

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=84.36  E-value=2.9  Score=30.90  Aligned_cols=60  Identities=13%  Similarity=0.070  Sum_probs=51.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        153 TVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       153 s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      .++++|..+|..|-.....|...+..+...+-..+..|+.. --.|+.+|..+|.+.|..+
T Consensus         6 kvi~~LN~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~-~a~eE~~Ha~~l~eri~~l   65 (160)
T d1jgca_           6 KVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSRE-ESIEEMGHADKIIARILFL   65 (160)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhC
Confidence            48899999999999999999999999987777888888887 6777778888888776654

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=80.90  E-value=4.3  Score=29.00  Aligned_cols=61  Identities=13%  Similarity=0.163  Sum_probs=54.6

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Q psy10513        152 NTVEDLLTEALHMEKQLNEKLLKLHACASQHGDANLTDFLEGRYLQEQVDAIKTLADLLTTV  213 (239)
Q Consensus       152 ~s~~eale~AL~~Ek~vt~~l~~L~~lA~~~~D~~t~~FLe~~fL~EQve~i~~L~~~L~~L  213 (239)
                      +...+.|..+++.|-.....|.....+|...+=+.+..++.. .-.++..|...+.++|..+
T Consensus         5 t~t~~~L~~a~~~E~~A~~~Y~~~a~~a~~~g~~~iA~~f~~-~A~eE~~HA~~~~~~i~~l   65 (141)
T d1j30a_           5 TKTAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRS-IAEGETAHAFGHLDFIRQG   65 (141)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHhC
Confidence            347789999999999999999999999999998999999987 8889999999998887665