Psyllid ID: psy10566
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 604 | 2.2.26 [Sep-21-2011] | |||||||
| Q8C6G8 | 641 | WD repeat-containing prot | yes | N/A | 0.844 | 0.795 | 0.653 | 0.0 | |
| Q9H7D7 | 661 | WD repeat-containing prot | yes | N/A | 0.844 | 0.771 | 0.653 | 0.0 | |
| Q28D01 | 614 | WD repeat-containing prot | yes | N/A | 0.895 | 0.881 | 0.612 | 0.0 | |
| Q5SP67 | 576 | WD repeat-containing prot | yes | N/A | 0.894 | 0.937 | 0.612 | 0.0 | |
| Q7K0L4 | 630 | WD repeat-containing prot | yes | N/A | 0.940 | 0.901 | 0.565 | 0.0 | |
| Q9UT85 | 507 | Uncharacterized WD repeat | yes | N/A | 0.794 | 0.946 | 0.326 | 9e-64 | |
| Q9V3J8 | 361 | Protein will die slowly O | no | N/A | 0.466 | 0.781 | 0.284 | 8e-20 | |
| Q93847 | 395 | Uncharacterized WD repeat | no | N/A | 0.471 | 0.721 | 0.265 | 8e-19 | |
| Q2KIG2 | 334 | WD repeat-containing prot | no | N/A | 0.468 | 0.847 | 0.263 | 1e-17 | |
| Q498M4 | 334 | WD repeat-containing prot | no | N/A | 0.468 | 0.847 | 0.263 | 1e-17 |
| >sp|Q8C6G8|WDR26_MOUSE WD repeat-containing protein 26 OS=Mus musculus GN=Wdr26 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/526 (65%), Positives = 430/526 (81%), Gaps = 16/526 (3%)
Query: 80 KTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADH 139
K ++++DED++RLIGQ+L +GL++T DLLMQESGC+L+HPSA KFR H+M+GDW KA++
Sbjct: 98 KRLSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAEN 157
Query: 140 DLNDLEYLLDS------RGDL----------VEMKFLILEQKYLEYLEDGRVLDALHVLR 183
DLN+L+ L+ S RG L V MKFL+L+QKYLEYLEDG+VL+AL VLR
Sbjct: 158 DLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVLEALQVLR 217
Query: 184 NELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLP 243
ELTPL +NT ++H LS ++MCS E L +A+W+GKG+ SR+KL+DKLQ++LPP+VMLP
Sbjct: 218 CELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLP 277
Query: 244 PRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDE 303
PRRLQTLL QAV+LQ+ C YHNTK+D +L++VSLL+DH+C++ +FPC T Q+L +HC+E
Sbjct: 278 PRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQILTEHCNE 337
Query: 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL 363
VWFCKFS DG KLATGSKDTTVIIW VDP T + KTLEGH GV+Y+AWSPD S+L+
Sbjct: 338 VWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDSYLV 397
Query: 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423
GP+DC ELW+WN++T LR K++ S EDSLTS +WN DG +FV GG RGQFYQCD++G
Sbjct: 398 ACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 457
Query: 424 QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT 483
+LDSWEGVRV CLWC SDGK+VLA+DTH R+R YNFE LTD N++QEDHP+MSFTI
Sbjct: 458 NLLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFEDLTDRNIVQEDHPIMSFTISKN 517
Query: 484 DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543
RLALLNV+TQGVHLWDL+DR+L+RK+QGVTQG +TIHSCFGG N+DF+ASGSED KVYI
Sbjct: 518 GRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYI 577
Query: 544 WHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
WH + ELPIA L+GHTRTV+CV+WNP M+AS SDD TVRIWGP
Sbjct: 578 WHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGP 623
|
May be involved in MAPK pathways. Mus musculus (taxid: 10090) |
| >sp|Q9H7D7|WDR26_HUMAN WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/526 (65%), Positives = 430/526 (81%), Gaps = 16/526 (3%)
Query: 80 KTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADH 139
K ++++DED++RLIGQ+L +GL++T DLLMQESGC+L+HPSA KFR H+M+GDW KA++
Sbjct: 118 KRLSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAEN 177
Query: 140 DLNDLEYLLDS------RGDL----------VEMKFLILEQKYLEYLEDGRVLDALHVLR 183
DLN+L+ L+ S RG L V MKFL+L+QKYLEYLEDG+VL+AL VLR
Sbjct: 178 DLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVLEALQVLR 237
Query: 184 NELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLP 243
ELTPL +NT ++H LS ++MCS E L +A+W+GKG+ SR+KL+DKLQ++LPP+VMLP
Sbjct: 238 CELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLP 297
Query: 244 PRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDE 303
PRRLQTLL QAV+LQ+ C YHNTK+D +L++VSLL+DH+C++ +FPC T Q+L +HC+E
Sbjct: 298 PRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQILTEHCNE 357
Query: 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL 363
VWFCKFS DG KLATGSKDTTVIIW VDP T + KTLEGH GV+Y+AWSPD ++L+
Sbjct: 358 VWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDNYLV 417
Query: 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423
GP+DC ELW+WN++T LR K++ S EDSLTS +WN DG +FV GG RGQFYQCD++G
Sbjct: 418 ACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 477
Query: 424 QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT 483
+LDSWEGVRV CLWC SDGK+VLA+DTH RIR YNFE LTD N++QEDHP+MSFTI
Sbjct: 478 NLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKN 537
Query: 484 DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543
RLALLNV+TQGVHLWDL+DR+L+RK+QGVTQG +TIHSCFGG N+DF+ASGSED KVYI
Sbjct: 538 GRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYI 597
Query: 544 WHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
WH + ELPIA L+GHTRTV+CV+WNP M+AS SDD TVRIWGP
Sbjct: 598 WHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGP 643
|
May be involved in MAPK pathways. Homo sapiens (taxid: 9606) |
| >sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/570 (61%), Positives = 442/570 (77%), Gaps = 29/570 (5%)
Query: 46 EDMQANGSGPSNH-LNGNTHNGVPEINGEVPAPAVKTMTRTDEDIVRLIGQYLRTIGLDR 104
E +NG SN+ L+G G E G K +++ DED++RLIGQ+L +GL++
Sbjct: 30 EPAHSNGVLSSNNGLSGTGSTGPTEQPG---GRKKKRLSQADEDVIRLIGQHLHGLGLNQ 86
Query: 105 TADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDS-------------- 150
T DLLMQESGC+L+HPSA KFR H+M+G+W KA++DLN+L+ L+ S
Sbjct: 87 TVDLLMQESGCRLEHPSATKFRNHVMEGEWDKAENDLNELKSLVHSPHAVAACRPSSGGS 146
Query: 151 ----------RGDLVE-MKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHEL 199
D++ MKFL+L+QKYLEYLEDG+VL+AL VLR ELTPL +NT ++H L
Sbjct: 147 GSEHSPTSCPTADVIRRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVL 206
Query: 200 SSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQK 259
S ++MCS + L +A+W+GKG+ SR+KL+DKLQ++LPP+VMLPPRRLQTLL QAV+LQ+
Sbjct: 207 SGYLMCSHADDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQR 266
Query: 260 YHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATG 319
C YHNTK+D +L++VSLL+DH+C++++FPC T QVL +HC+EVWFCKFS DG KLATG
Sbjct: 267 DRCLYHNTKLDNNLDSVSLLIDHVCSRKQFPCFTQQVLTEHCNEVWFCKFSNDGTKLATG 326
Query: 320 SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379
SKDTTVIIW VDP T + KTLEGH GV+YLAWSPD ++L+ GP+DC ELW+WN++
Sbjct: 327 SKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYLAWSPDDNYLIACGPDDCSELWLWNVQ 386
Query: 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWC 439
T LR K++ S EDSLTS +WN DG +FV GG RGQFYQCD++G +LDSWEGVRV CLWC
Sbjct: 387 TGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWC 446
Query: 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLW 499
SDGK+VLA+DTH RIR YNFE LTD N++QEDHP+MSFTI RLALLNV+TQGVHLW
Sbjct: 447 LSDGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISRNGRLALLNVATQGVHLW 506
Query: 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT 559
DL+DR+L+RK+QGVTQG +TIHSCFGG N+DF+ASGSED KVY+WH + ELPIA L+GHT
Sbjct: 507 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYVWHKRSELPIAELTGHT 566
Query: 560 RTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
RTV+CV+WNP ++AS SDD TVRIWGP
Sbjct: 567 RTVNCVSWNPQIPSLMASASDDGTVRIWGP 596
|
May be involved in MAPK pathways. Xenopus tropicalis (taxid: 8364) |
| >sp|Q5SP67|WDR26_DANRE WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/557 (61%), Positives = 438/557 (78%), Gaps = 17/557 (3%)
Query: 48 MQANGSGPSNHLNGNTHNGVPEING---------------EVPAPAVKTMTRTDEDIVRL 92
MQ+NG+G + NT NG + NG K +++ +ED++RL
Sbjct: 1 MQSNGTGQEQNHPANTQNG--DANGLQSNAGSASGASGTGSGSLKKKKRLSQAEEDVIRL 58
Query: 93 IGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRG 152
IGQ+L +GL++T DLLMQESGC+L+H SA KFR H+M+G+W KA++DLN+L+ L+ S
Sbjct: 59 IGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNELKALMHSPN 118
Query: 153 DLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLL 212
+V MKFL+L+QKYLEYLEDG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L
Sbjct: 119 AIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLKYNTDRIHVLSGYLMCSHAEDLK 178
Query: 213 ERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDES 272
+A+W+GKG+ SR +L+DKLQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D S
Sbjct: 179 AKAEWEGKGAGSRCRLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDSS 238
Query: 273 LENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP 332
L++VSLL+DH+C++++FPC T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW V+P
Sbjct: 239 LDSVSLLLDHVCSRKQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVEP 298
Query: 333 VTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392
T + +TLEGH GV+YLAWSPD +L+ GP+DC ELW+WN++T LR K++ S E
Sbjct: 299 DTHQLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHE 358
Query: 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH 452
DSLTS +WN DG +FV GG RGQFYQCD++G +L+SWEGVRV CLWC DG++VLA+DTH
Sbjct: 359 DSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLESWEGVRVQCLWCMGDGRTVLASDTH 418
Query: 453 HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512
RIR Y+FE LTD N++QEDHP+MSFT+ RLALLNV+TQGVHLWDL+DR+L+RK+QG
Sbjct: 419 QRIRGYSFEDLTDRNIVQEDHPIMSFTVSKNGRLALLNVATQGVHLWDLQDRVLVRKYQG 478
Query: 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH 572
VTQG +TIHSCFGG N+DF+ASGSED KVYIWH + ELPI L+GHTRTV+CV+WNP
Sbjct: 479 VTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGHTRTVNCVSWNPCIP 538
Query: 573 QMIASVSDDCTVRIWGP 589
++AS SDD TVRIWGP
Sbjct: 539 SLMASASDDGTVRIWGP 555
|
May be involved in MAPK pathways. Danio rerio (taxid: 7955) |
| >sp|Q7K0L4|WDR26_DROME WD repeat-containing protein 26 homolog OS=Drosophila melanogaster GN=CG7611 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/575 (56%), Positives = 428/575 (74%), Gaps = 7/575 (1%)
Query: 23 GDSDDGAPPPLKKSRASVQASGQEDMQANGSGPSNHLNGNTHNGVP-EINGEVPAPAVKT 81
G DD + S A+ D + NG +N NG++ V E N E + +
Sbjct: 35 GSGDDSVGIGDENPSGSSAATNGHDSKHNGFIVNN--NGSSSRIVDGENNRENTSCSGVQ 92
Query: 82 MTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDL 141
+ +++++I+RLIGQYL +GLD++ LM ESGC L+HPSA KFR+H++ GDWSKAD DL
Sbjct: 93 LDKSNQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVLMGDWSKADSDL 152
Query: 142 NDLEYLLDSR--GDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHEL 199
DLE L+D+ + EMKF++LEQKYLE+L+DG LDALHVLR+ELTPL HN +VH+L
Sbjct: 153 KDLEPLIDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSELTPLQHNITRVHQL 212
Query: 200 SSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQK 259
SS+MMCS + L +RAKW+GKG SR +M++LQ+F+PP+VM+ PRRL+TLL QAV+LQ
Sbjct: 213 SSYMMCSTNQDLYQRAKWEGKGILSRALVMERLQTFMPPSVMMSPRRLRTLLQQAVELQS 272
Query: 260 YHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATG 319
HCP H+ + +LE VSLL DH CT + FP +T Q+L DHCDEVWFCKFSPDGLKLATG
Sbjct: 273 QHCPCHDMAWETNLETVSLLTDHCCTTDGFPMQTIQILTDHCDEVWFCKFSPDGLKLATG 332
Query: 320 SKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
SKD+TVIIWDVDP T +HR+ L+G L V++++WSPDS +LV G ED HEL++WN+
Sbjct: 333 SKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDSKLILVGGTEDSHELYIWNV 392
Query: 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLW 438
+ L VK + S EDSL +++RDG +FVCGG +GQ Y CD+ G ++DSWEGVRVN +
Sbjct: 393 DDGKLVVKFSQSLEDSLACGAFSRDGARFVCGGQKGQLYLCDLNGTIVDSWEGVRVNSIA 452
Query: 439 CRSDGKSVLAADTHHRIRTYNFEH-LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVH 497
R+D K++LAAD H+RIR YNF+ +D ++L+E HP+M+F+I++ DRLALLNVS QG+H
Sbjct: 453 FRADNKTILAADNHYRIRGYNFDSPRSDFDILREPHPIMTFSINSADRLALLNVSNQGLH 512
Query: 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557
LWD+ D+ L+R+FQG+ Q F IHSCFGG N+ FVASGSED VYIWH+KRE P+A L+G
Sbjct: 513 LWDIEDKCLVRRFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIWHIKREEPLAKLAG 572
Query: 558 HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592
HT+TV+CV+WNPVY ++AS SDD TVRIWGP N
Sbjct: 573 HTKTVNCVSWNPVYPSLLASASDDATVRIWGPKPN 607
|
Drosophila melanogaster (taxid: 7227) |
| >sp|Q9UT85|YIPC_SCHPO Uncharacterized WD repeat-containing protein C343.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC343.04c PE=4 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (625), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 250/511 (48%), Gaps = 31/511 (6%)
Query: 88 DIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYL 147
+++ L+ Q+L G D + L +E+G + + +Q ++ GDW A+ + ++
Sbjct: 10 EVIHLLLQFLNDYGYDESLKALEKETGLVSETEDVKRLKQAVLQGDWITAEAAFSIMQLR 69
Query: 148 LDSRGDLVEMKFLILEQKYLEYLEDGRVLDALHVLRN-ELTPLNHNTAKVHELSSFMMCS 206
+S+ E +FL+ +Q+ LE G + +A++VL+N E T N + L S ++ S
Sbjct: 70 DESKRK--EAQFLLQKQRCLELARSGAICEAIYVLQNFESTDFNKEKER---LVSIILES 124
Query: 207 GVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHN 266
+ E +G G+ +R L+++L ++ P ++LP RRL+ LL QA D Q YHN
Sbjct: 125 NNKSNNELITKNGYGN-TRLDLLNQLSEYISPEILLPKRRLEHLLQQAKDYQVSSQVYHN 183
Query: 267 TKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI 326
L+N S L D+ E P + V +DH DEVW +S +G LA+ SKD T I
Sbjct: 184 V-----LKNFSFLSDYKADPSELPTKEYHVFHDHSDEVWQISYSHNGRYLASASKDKTAI 238
Query: 327 IWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386
I+DV + L GH VAY+ WSPD +LL + LW E LR
Sbjct: 239 IFDV----VNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWD-AFTGEKLR-- 291
Query: 387 LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSV 446
++ S++ C W DG F+ G + G++L WE V + + SDG +
Sbjct: 292 -DYKHGFSVSCCCWLPDGLSFITGSPDCHITHWSLNGEILYKWEDVNIYDMALTSDGTKL 350
Query: 447 L---------AADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVH 497
A D H I Y+ E + V S + + AL N+
Sbjct: 351 YIVGFEQLINAEDKH--IAIYSVETRECIKKISLQSKVTSICLSKDSKYALTNLEPHTTF 408
Query: 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557
LWDL + ++R++ G G F I SCFGG + FV SGSED K+ IWH + +ATLSG
Sbjct: 409 LWDLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSG 468
Query: 558 HTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588
H + V+ VA+NPV AS DD TVRIW
Sbjct: 469 HVKCVNYVAYNPVDPYQFASAGDDNTVRIWS 499
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1 | Back alignment and function description |
|---|
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 17/299 (5%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS 356
L H V KFSP+G LA+ S D + IW + + KT+ GH LG++ +AWS
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGA----YDGKFEKTISGHKLGISDVAWS 123
Query: 357 PDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415
DS LLV G +D L VW + T + L+ HS + + C++N V G
Sbjct: 124 SDS-RLLVSGSDD-KTLKVWELSTGKSLKTLKGHS--NYVFCCNFNPQSNLIVSGSFDES 179
Query: 416 FYQCDIE-GQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSNLLQE 471
D+ G+ L + V+ + DG ++++ R ++ L+ +
Sbjct: 180 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 239
Query: 472 DHPVMSFT-IDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD 530
D+P +SF + L + LWD L+ + G ++ I + F
Sbjct: 240 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 299
Query: 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS--DDCTVRIW 587
++ SGSED VYIW+++ + + L GHT TV C A +P +IAS + +D T+++W
Sbjct: 300 WIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPT-ENIIASAALENDKTIKLW 357
|
Essential for viability. Drosophila melanogaster (taxid: 7227) |
| >sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 16/301 (5%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
++ N H + KFSPDG + +GS D ++ IW +D V + KTL GH LG+
Sbjct: 100 AEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFV-----YEKTLMGHRLGINEF 154
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413
+WS DS L+V D + V+++ + VK + + C +N GT G
Sbjct: 155 SWSSDSK--LIVSCSDDKLVKVFDVSSGRC-VKTLKGHTNYVFCCCFNPSGTLIASGSFD 211
Query: 414 GQF-YQCDIEGQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTYNFEHLT-DSNLL 469
C G + S G V+ + DG + + +R ++ T L+
Sbjct: 212 ETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLI 271
Query: 470 QEDHPVMS-FTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528
E+HP ++ + L + + LWD + +L+++ G ++ + + F
Sbjct: 272 DEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTG 331
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS--DDCTVRI 586
++ SGSED KVYIW+++ + TL GH V C +P +IAS + D ++I
Sbjct: 332 GKWIVSGSEDHKVYIWNLQTREILQTLDGHNTAVMCTDCHP-GQNIIASAALEPDMRIKI 390
Query: 587 W 587
W
Sbjct: 391 W 391
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 137/300 (45%), Gaps = 17/300 (5%)
Query: 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW 355
L H V KFSP+G LA+ S D + IW + + KT+ GH LG++ +AW
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA----YDGKFEKTISGHKLGISDVAW 95
Query: 356 SPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414
S DS+ L+V D L +W++ + + L+ HS + + C++N V G
Sbjct: 96 SSDSN--LLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCNFNPQSNLIVSGSFDE 151
Query: 415 QFYQCDIE-GQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSNLLQ 470
D++ G+ L + V+ + DG ++++ R ++ L+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 471 EDHPVMSFT-IDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
+D+P +SF + L + LWD L+ + G ++ I + F
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS--DDCTVRIW 587
++ SGSED VYIW+++ + + L GHT V A +P +IAS + +D T+++W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAALENDKTIKLW 330
|
Contributes to histone modification. May position the N-terminus of histone H3 for efficient trimethylation at 'Lys-4'. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. May regulate osteoblasts differentiation. Bos taurus (taxid: 9913) |
| >sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 137/300 (45%), Gaps = 17/300 (5%)
Query: 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW 355
L H V KFSP+G LA+ S D + IW + + KT+ GH LG++ +AW
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA----YDGKFEKTISGHKLGISDVAW 95
Query: 356 SPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414
S DS+ L+V D L +W++ + + L+ HS + + C++N V G
Sbjct: 96 SSDSN--LLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCNFNPQSNLIVSGSFDE 151
Query: 415 QFYQCDIE-GQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSNLLQ 470
D++ G+ L + V+ + DG ++++ R ++ L+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 471 EDHPVMSFT-IDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
+D+P +SF + L + LWD L+ + G ++ I + F
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS--DDCTVRIW 587
++ SGSED VYIW+++ + + L GHT V A +P +IAS + +D T+++W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAALENDKTIKLW 330
|
Contributes to histone modification. May position the N-terminus of histone H3 for efficient trimethylation at 'Lys-4'. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. May regulate osteoblasts differentiation. Rattus norvegicus (taxid: 10116) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 604 | ||||||
| 242014252 | 592 | WD-repeat protein, putative [Pediculus h | 0.905 | 0.923 | 0.710 | 0.0 | |
| 307207965 | 619 | WD repeat-containing protein 26 [Harpegn | 0.920 | 0.898 | 0.688 | 0.0 | |
| 345484966 | 594 | PREDICTED: WD repeat-containing protein | 0.912 | 0.927 | 0.691 | 0.0 | |
| 307179174 | 609 | WD repeat-containing protein 26 [Campono | 0.897 | 0.889 | 0.702 | 0.0 | |
| 332023948 | 601 | WD repeat-containing protein 26 [Acromyr | 0.899 | 0.903 | 0.684 | 0.0 | |
| 350415085 | 604 | PREDICTED: WD repeat-containing protein | 0.894 | 0.894 | 0.685 | 0.0 | |
| 340714761 | 604 | PREDICTED: WD repeat-containing protein | 0.894 | 0.894 | 0.687 | 0.0 | |
| 380020160 | 604 | PREDICTED: WD repeat-containing protein | 0.894 | 0.894 | 0.678 | 0.0 | |
| 383860698 | 604 | PREDICTED: WD repeat-containing protein | 0.894 | 0.894 | 0.678 | 0.0 | |
| 193587325 | 577 | PREDICTED: WD repeat-containing protein | 0.910 | 0.953 | 0.641 | 0.0 |
| >gi|242014252|ref|XP_002427805.1| WD-repeat protein, putative [Pediculus humanus corporis] gi|212512274|gb|EEB15067.1| WD-repeat protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/563 (71%), Positives = 476/563 (84%), Gaps = 16/563 (2%)
Query: 41 QASGQEDMQANGSGPSNHLNGNTHNGVPE--INGEVPAPAV-KTMTRTDEDIVRLIGQYL 97
QA+ Q NG+ S G T NG + ING+V + KTM +T+++IVRL+GQYL
Sbjct: 3 QAANGCSPQQNGTSESRQ--GITQNGTDDCVINGDVNGEIIPKTMDKTNQEIVRLVGQYL 60
Query: 98 RTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLV-- 155
+++GL++TA+ LMQESGC+LDHP+AAKFRQH+MDGDWSKAD DLN+L+ LL+ +
Sbjct: 61 KSVGLNQTAEFLMQESGCRLDHPAAAKFRQHVMDGDWSKADSDLNELKSLLEPSSNQTMQ 120
Query: 156 ---------EMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCS 206
EMKFL+LEQKYLEYLEDG+VLDALHVLRNELTPL HNT++VHELSS+MMC+
Sbjct: 121 NNQPLNLYEEMKFLLLEQKYLEYLEDGKVLDALHVLRNELTPLQHNTSRVHELSSYMMCN 180
Query: 207 GVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHN 266
G E+L A W GKG++SRT LMDKLQ+FLPPT+MLPPRRL LL QAVD+QK +CPYHN
Sbjct: 181 GREELHALAHWQGKGTKSRTLLMDKLQTFLPPTIMLPPRRLHNLLIQAVDVQKQNCPYHN 240
Query: 267 TKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI 326
TK + + +V+LLVDHLC+KE+FPCET+Q+LNDHCDEVWFC+FSPDGLKLATGSKDTTVI
Sbjct: 241 TKSEGGVIDVTLLVDHLCSKEQFPCETSQILNDHCDEVWFCRFSPDGLKLATGSKDTTVI 300
Query: 327 IWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386
IWDVDP + HR+TLEGH GVAYLAWSPDS+HL+ GPEDC ELW+WNIE++ LRVK
Sbjct: 301 IWDVDPESLQVTHRRTLEGHGYGVAYLAWSPDSTHLIACGPEDCPELWIWNIESDELRVK 360
Query: 387 LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSV 446
++HSPEDSLTSCSW++DG KFV GGIRGQFYQ D+EG +LDSWEGVRVNCLWCRSDGK+V
Sbjct: 361 VSHSPEDSLTSCSWHKDGKKFVTGGIRGQFYQFDLEGNILDSWEGVRVNCLWCRSDGKTV 420
Query: 447 LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506
LAADTH RIR YNF+ L+D+N+LQEDHPVM+FT++A DRLALLNV+TQ VHLWDL D+ L
Sbjct: 421 LAADTHQRIRGYNFDMLSDTNILQEDHPVMTFTVNAADRLALLNVATQSVHLWDLEDKCL 480
Query: 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVA 566
+RKFQGVTQG FTIHSCFGG NQDFVASGSED KVYIWH+KRELPIA L+GHTRTV+CV+
Sbjct: 481 VRKFQGVTQGHFTIHSCFGGVNQDFVASGSEDNKVYIWHLKRELPIAILNGHTRTVNCVS 540
Query: 567 WNPVYHQMIASVSDDCTVRIWGP 589
WNPVYHQ++ASVSDD T+RIW P
Sbjct: 541 WNPVYHQLMASVSDDGTIRIWAP 563
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307207965|gb|EFN85524.1| WD repeat-containing protein 26 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/565 (68%), Positives = 462/565 (81%), Gaps = 9/565 (1%)
Query: 34 KKSRASVQASGQEDMQANGSGPSNHLNGN----THNGVPEINGEV--PAPAVKTMTRTDE 87
+ + + V + Q++ SG S NGN T N V +NGE + K M +T++
Sbjct: 9 QAANSGVSSGLQQNGDTADSGGSQIANGNLLPETDNDVSGVNGEANPSSGPPKIMDKTNQ 68
Query: 88 DIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYL 147
DIVRLIGQ+L+T+GLDRTADLLMQESGC+LDHP+AAKFRQH+MDGDWSKADHDLN+L+
Sbjct: 69 DIVRLIGQHLKTVGLDRTADLLMQESGCRLDHPAAAKFRQHVMDGDWSKADHDLNELKSF 128
Query: 148 LDSRG-DLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCS 206
L+S LVEMKFL+LEQKYLEYLE+G+VL+AL VLRNELTPL HNT +VH+LS+FMMCS
Sbjct: 129 LNSANQSLVEMKFLLLEQKYLEYLEEGKVLEALQVLRNELTPLGHNTGRVHQLSAFMMCS 188
Query: 207 GVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHN 266
G ++L RA WDGKG SR LMD+LQ +LPP++MLPPRRL +LL QAV++Q C YH
Sbjct: 189 GRDELQIRAGWDGKGPASRAALMDRLQRYLPPSIMLPPRRLHSLLCQAVEMQNQQCTYHV 248
Query: 267 TKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI 326
T SLENVSLLVDH C+KEEFPC T Q+LNDHCDEVW+CKFSPDGLKLATGSKD TVI
Sbjct: 249 THTQTSLENVSLLVDHSCSKEEFPCHTIQILNDHCDEVWYCKFSPDGLKLATGSKDMTVI 308
Query: 327 IWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLR 384
IWDVDP T HRKTLEGHT GVA + WSPDS+HL+ GPEDC ELW+WN++T LR
Sbjct: 309 IWDVDPETLKVTHRKTLEGHTYGVALITWSPDSTHLIACGPEDCPELWLWNVDTPDCELR 368
Query: 385 VKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGK 444
VKL S +DSLT+C+W+RD KFV GG+RGQFYQCD++G V ++WEG+RV CLWCR+DGK
Sbjct: 369 VKLTQSTDDSLTACAWHRDSNKFVAGGLRGQFYQCDMDGNVSETWEGIRVKCLWCRNDGK 428
Query: 445 SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504
+VLAAD+HHRIR YNF+ L D +LQEDHPVMSF+++ TDRLALLNV+ QGVHLWDL DR
Sbjct: 429 TVLAADSHHRIRGYNFDDLCDFTILQEDHPVMSFSVNKTDRLALLNVANQGVHLWDLHDR 488
Query: 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSC 564
L+R+FQGVTQG FTIHSCFGG NQDF+ASGSED KVY+WH+KRE PIATL GH+RTV+C
Sbjct: 489 CLVRRFQGVTQGHFTIHSCFGGVNQDFIASGSEDNKVYVWHIKREQPIATLIGHSRTVNC 548
Query: 565 VAWNPVYHQMIASVSDDCTVRIWGP 589
V+WNPVYHQM+ASVSDDCTVRIWGP
Sbjct: 549 VSWNPVYHQMMASVSDDCTVRIWGP 573
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345484966|ref|XP_001604875.2| PREDICTED: WD repeat-containing protein 26-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/560 (69%), Positives = 466/560 (83%), Gaps = 9/560 (1%)
Query: 38 ASVQASGQEDMQANGSGPSNHLNGN----THNGVPEINGE-VPAPAVKTMTRTDEDIVRL 92
A V Q++ A+ SG + H NGN T E+NGE + K M +T++DIVRL
Sbjct: 13 APVSPGAQQNGTASDSGGA-HTNGNIATETDGDAGELNGEETESMPAKAMDKTNQDIVRL 71
Query: 93 IGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRG 152
IGQ+L+T+GL RTADLLMQESGC+LDHP+AAKFRQH+MDGDW+KADHDL++L+ L+S
Sbjct: 72 IGQHLKTVGLHRTADLLMQESGCRLDHPAAAKFRQHVMDGDWTKADHDLDELKSFLNSAN 131
Query: 153 -DLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQL 211
LVEMKFL+LEQKYLE+LEDG VL+AL VLRNELTPL HNT +VH+LS+FMMCSG ++L
Sbjct: 132 QSLVEMKFLLLEQKYLEHLEDGLVLEALQVLRNELTPLGHNTGRVHQLSAFMMCSGRDEL 191
Query: 212 LERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDE 271
RA W+GKG +SR LMD+LQ +LPP++MLPPRRL +LL QAV++Q C YH T+
Sbjct: 192 QSRAGWEGKGLESRAALMDRLQKYLPPSIMLPPRRLHSLLCQAVEMQNQQCTYHITQTQT 251
Query: 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
+LENVSLLVDH C+KE+FPC TTQ+LNDHCDEVW+CKFSPDGLKLATGSKD +VIIWDVD
Sbjct: 252 NLENVSLLVDHSCSKEQFPCHTTQILNDHCDEVWYCKFSPDGLKLATGSKDMSVIIWDVD 311
Query: 332 PVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNH 389
P T HRKTLEGHT GVA +AWSPDSSHL+ GPEDC ELW+W+++T LRVKLN
Sbjct: 312 PETLRVTHRKTLEGHTYGVALIAWSPDSSHLIACGPEDCPELWLWSVDTPDCELRVKLNQ 371
Query: 390 SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAA 449
S EDSLT+C+W+RD KFV GG+RGQFYQCDI+G VLDSWEGVRV LWCRSDGK+VLAA
Sbjct: 372 STEDSLTACAWHRDSNKFVTGGLRGQFYQCDIDGNVLDSWEGVRVKSLWCRSDGKTVLAA 431
Query: 450 DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509
D+HHRIR YNF+ L++ +LQEDHP+MSF+++ DR ALLNV+ QGVHLWDL+DR L+R+
Sbjct: 432 DSHHRIRGYNFDELSEFTILQEDHPIMSFSVNKADRQALLNVAHQGVHLWDLQDRSLIRR 491
Query: 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569
FQGVTQG FTIHSCFGG NQDF+ASGSED KVY+WH+K+ELPIATL+GH+RTV+CV+WNP
Sbjct: 492 FQGVTQGHFTIHSCFGGVNQDFIASGSEDNKVYVWHIKKELPIATLTGHSRTVNCVSWNP 551
Query: 570 VYHQMIASVSDDCTVRIWGP 589
VYHQM+ASVSDDCT+RIWGP
Sbjct: 552 VYHQMMASVSDDCTIRIWGP 571
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307179174|gb|EFN67612.1| WD repeat-containing protein 26 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/555 (70%), Positives = 456/555 (82%), Gaps = 13/555 (2%)
Query: 48 MQANGSGPSN---HLNGN----THNGVPEINGEVPAP--AVKTMTRTDEDIVRLIGQYLR 98
+Q NGS + H NGN + + + +NGE+ K M +T++DIVRLIGQ+L+
Sbjct: 24 LQQNGSKADSGGLHANGNLLPESDSDINGVNGEINQSLGPPKIMDKTNQDIVRLIGQHLK 83
Query: 99 TIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDS-RGDLVEM 157
T+GLDRTADLLMQESGC+LDHP+AAKFRQH+MDGDW+KADHDLN+L+ L S LVEM
Sbjct: 84 TVGLDRTADLLMQESGCRLDHPAAAKFRQHVMDGDWNKADHDLNELKSFLKSAHQSLVEM 143
Query: 158 KFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKW 217
KFL+LEQKYLEYLE+G V DALHVLRNELTPL HNT +VH+LS FMMCSG ++L RA W
Sbjct: 144 KFLLLEQKYLEYLEEGMVFDALHVLRNELTPLGHNTGRVHQLSLFMMCSGRDELQTRAGW 203
Query: 218 DGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVD-ESLENV 276
DGKG SR LMD+LQ +LPP++MLPPRRL +LL QAV++Q C YH T SLENV
Sbjct: 204 DGKGPVSRAALMDRLQKYLPPSIMLPPRRLHSLLCQAVEMQSQLCTYHITHTQPTSLENV 263
Query: 277 SLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT 336
SLLVDH C KE+FPC T Q+LNDHCDEVW+CKFSPDGLKLATGSKD TVIIWDVDP T
Sbjct: 264 SLLVDHSCGKEQFPCHTIQILNDHCDEVWYCKFSPDGLKLATGSKDMTVIIWDVDPETLK 323
Query: 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPEDS 394
HRKTLEGHT GVA +AWSPDSSHL+ GPEDC ELW+WN++T LRV+L + +DS
Sbjct: 324 VTHRKTLEGHTYGVALIAWSPDSSHLIACGPEDCPELWLWNVDTPDCELRVRLTQNTDDS 383
Query: 395 LTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHR 454
LT+C+W+RD KFV GG+RGQFYQCD++G V DSWEGVRV CLWCRSDGK+VLAADTHHR
Sbjct: 384 LTACAWHRDSNKFVAGGLRGQFYQCDMDGNVSDSWEGVRVKCLWCRSDGKTVLAADTHHR 443
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514
IR YNF+ L D +LQEDHPVMSF+++ DRLALLNV+ QGVHLWDL+DR L+R+FQGVT
Sbjct: 444 IRGYNFDDLCDFTMLQEDHPVMSFSVNKADRLALLNVANQGVHLWDLQDRCLVRRFQGVT 503
Query: 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574
QG FTIHSCFGG NQDF+ASGSED KVYIWH+KRELPIATL+GH+RTV+CV+WNPVYHQM
Sbjct: 504 QGHFTIHSCFGGTNQDFIASGSEDTKVYIWHIKRELPIATLTGHSRTVNCVSWNPVYHQM 563
Query: 575 IASVSDDCTVRIWGP 589
+ASVSDD TVRIWGP
Sbjct: 564 MASVSDDFTVRIWGP 578
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332023948|gb|EGI64166.1| WD repeat-containing protein 26 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/554 (68%), Positives = 454/554 (81%), Gaps = 11/554 (1%)
Query: 45 QEDMQANGSGPSNHLNGN----THNGVPEINGEVPAP--AVKTMTRTDEDIVRLIGQYLR 98
Q +A+ GP H NGN + N + +NG++ K M +T++DIVRLIGQ+L+
Sbjct: 21 QNGAKADSGGP--HANGNLLPESDNDINGVNGDINQSLGPPKIMDQTNQDIVRLIGQHLK 78
Query: 99 TIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRG-DLVEM 157
T+GLDRTADLLMQESGC+LDHP+AAKFRQH+MDGDW+KADH LN+L+ LDS LVEM
Sbjct: 79 TVGLDRTADLLMQESGCRLDHPTAAKFRQHVMDGDWNKADHTLNELKSFLDSANQSLVEM 138
Query: 158 KFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKW 217
KFL+LEQKYLEYLE+G V DALHVLRNELTPL HNT ++H+LS FMMCSG ++L RA W
Sbjct: 139 KFLLLEQKYLEYLEEGMVFDALHVLRNELTPLGHNTGRIHQLSLFMMCSGRDELQTRASW 198
Query: 218 DGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVS 277
DGKGS SR LMD+LQ FLPP++MLPPRRL +LL QAV++Q C YH T +LENVS
Sbjct: 199 DGKGSASRAALMDRLQRFLPPSIMLPPRRLHSLLCQAVEMQNQLCTYHVTHSQTNLENVS 258
Query: 278 LLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTC 337
LLVDH C +++FPC T Q+LNDHCDEVW+CKFSPDGLKLATG KD TVIIWDVDP T
Sbjct: 259 LLVDHNCGEDQFPCYTIQILNDHCDEVWYCKFSPDGLKLATGGKDMTVIIWDVDPETLKV 318
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPEDSL 395
HRKTLEGH+ GV +AWSPDS++LLV GPEDC ELW+W+I+T LRVKL S +DSL
Sbjct: 319 THRKTLEGHSYGVGVIAWSPDSNYLLVCGPEDCPELWLWSIDTPDCELRVKLTQSTDDSL 378
Query: 396 TSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRI 455
T+C+W+RD KFV GGIRGQFYQCD++G V DSWEGVRV CLWCRSDG++VLA+DTHHRI
Sbjct: 379 TACAWHRDSNKFVTGGIRGQFYQCDMDGNVSDSWEGVRVKCLWCRSDGRTVLASDTHHRI 438
Query: 456 RTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ 515
R+Y F+ L D+ +LQE+HP+MSF++D TDRL LLNV+ QG+HLWDL D+ L+R+F+GVTQ
Sbjct: 439 RSYTFDDLGDATILQEEHPIMSFSVDRTDRLVLLNVANQGMHLWDLEDKCLIRRFRGVTQ 498
Query: 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575
G FTIHSCFGG NQDF+ASGSED KVY+WH+KRELPIA L+GH+R VSCV+WNPVYHQM+
Sbjct: 499 GHFTIHSCFGGVNQDFIASGSEDNKVYVWHIKRELPIAILTGHSRLVSCVSWNPVYHQMM 558
Query: 576 ASVSDDCTVRIWGP 589
ASVSDD TVRIWGP
Sbjct: 559 ASVSDDFTVRIWGP 572
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350415085|ref|XP_003490528.1| PREDICTED: WD repeat-containing protein 26-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/556 (68%), Positives = 453/556 (81%), Gaps = 16/556 (2%)
Query: 48 MQANGS-----GPSNHLNGN----THNGVPEINGEVPA--PAVKTMTRTDEDIVRLIGQY 96
+Q NGS GP H NGN + N + +NGE K M +T++DIVRLIGQ+
Sbjct: 20 LQQNGSTADSGGP--HANGNMIPESDNDINSVNGETNQNLGPPKIMDKTNQDIVRLIGQH 77
Query: 97 LRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLD-SRGDLV 155
L+T+GL+RTADLLMQESGC+LDHP+AAKFRQH+MDGDW+KA+HDL++L+ L+ + LV
Sbjct: 78 LKTVGLNRTADLLMQESGCRLDHPAAAKFRQHVMDGDWTKAEHDLSELKIFLNGANQSLV 137
Query: 156 EMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERA 215
EMKFL+LEQKYLEYLE+G VL+ALHVLRNELTPL HNT +VH+LS+FMMCSG ++L RA
Sbjct: 138 EMKFLLLEQKYLEYLEEGLVLEALHVLRNELTPLGHNTGRVHQLSAFMMCSGRDELQTRA 197
Query: 216 KWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLEN 275
WDGKG+ SR LMD+LQ +LPP++MLPPRRL +LL QAV++Q C YH T SLEN
Sbjct: 198 GWDGKGAVSRAALMDRLQKYLPPSIMLPPRRLHSLLCQAVEMQNQQCTYHVTHTQASLEN 257
Query: 276 VSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF 335
VSLLVDH C+KE+FPC T QVLN+HCDEVW+CKFSPDG KLATGSKD TVIIWDVDP T
Sbjct: 258 VSLLVDHSCSKEQFPCHTLQVLNNHCDEVWYCKFSPDGRKLATGSKDMTVIIWDVDPETL 317
Query: 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPED 393
HRKTLEGHT GVA +AWSPDSS L+ GPEDC ELW+W+I+ LR + S +D
Sbjct: 318 RVTHRKTLEGHTYGVALIAWSPDSSLLIACGPEDCPELWLWSIDPPDYELRATVTQSTDD 377
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
SLT+C+W D KFV GG+RGQFYQ DIEG V +SWEGVRV CLWC++DGK+VLAAD+HH
Sbjct: 378 SLTACAWYPDSRKFVAGGLRGQFYQFDIEGNVSESWEGVRVKCLWCKNDGKTVLAADSHH 437
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
RIR YNF+ L D +LQEDHP+MSF++D DRLALLNV+ QGVHLWDL+DR L+R+FQGV
Sbjct: 438 RIRGYNFDELCDFTILQEDHPLMSFSVDKADRLALLNVANQGVHLWDLQDRCLVRRFQGV 497
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
TQG FTIHSCFGG NQDFVASGSED KVY+WH+KRELPIA L+GH+RTV+CV+WNPVYHQ
Sbjct: 498 TQGHFTIHSCFGGVNQDFVASGSEDTKVYVWHIKRELPIAILTGHSRTVNCVSWNPVYHQ 557
Query: 574 MIASVSDDCTVRIWGP 589
M+ASVSDDCTVRIWGP
Sbjct: 558 MMASVSDDCTVRIWGP 573
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340714761|ref|XP_003395893.1| PREDICTED: WD repeat-containing protein 26-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/556 (68%), Positives = 453/556 (81%), Gaps = 16/556 (2%)
Query: 48 MQANGS-----GPSNHLNGN----THNGVPEINGEVPA--PAVKTMTRTDEDIVRLIGQY 96
+Q NGS GP H NGN + N + +NGE K M +T++DIVRLIGQ+
Sbjct: 20 LQQNGSTADSGGP--HANGNMIPESDNDINGVNGETNQNLGPPKIMDKTNQDIVRLIGQH 77
Query: 97 LRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLD-SRGDLV 155
L+T+GL+RTADLLMQESGC+LDHP+AAKFRQH+MDGDWSKA+HDL++L+ L+ + LV
Sbjct: 78 LKTVGLNRTADLLMQESGCRLDHPTAAKFRQHVMDGDWSKAEHDLSELKIFLNGANQSLV 137
Query: 156 EMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERA 215
EMKFL+LEQKYLEYLE+G VL+ALHVLRNELTPL HNT +VH+LS+FMMCSG ++L RA
Sbjct: 138 EMKFLLLEQKYLEYLEEGLVLEALHVLRNELTPLGHNTGRVHQLSAFMMCSGRDELQTRA 197
Query: 216 KWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLEN 275
WDGKG+ SR LMD+LQ +LPP++MLPPRRL +LL QAV++Q C YH T SLEN
Sbjct: 198 GWDGKGAVSRAALMDRLQKYLPPSIMLPPRRLHSLLCQAVEMQNQQCTYHVTHTQASLEN 257
Query: 276 VSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF 335
VSLLVDH C+KE+FPC T QVLN+HCDEVW+CKFSPDG KLATGSKD TVIIWDVDP T
Sbjct: 258 VSLLVDHSCSKEQFPCHTLQVLNNHCDEVWYCKFSPDGRKLATGSKDMTVIIWDVDPETL 317
Query: 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPED 393
HRKTLEGHT GVA +AWSPDSS L+ GPEDC ELW+W+I+ LR + S +D
Sbjct: 318 RVTHRKTLEGHTYGVALIAWSPDSSLLIACGPEDCPELWLWSIDPPDYELRATVTQSTDD 377
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
SLT+C+W D KFV GG+RGQFYQ DIEG V +SWEGVRV CLWC++DGK+VLAAD+HH
Sbjct: 378 SLTACAWYPDSRKFVAGGLRGQFYQFDIEGNVSESWEGVRVKCLWCKNDGKTVLAADSHH 437
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
RIR YNF+ L D +LQEDHP+MSF++D DRLALLNV+ QGVHLWDL+DR L+R+FQGV
Sbjct: 438 RIRGYNFDELCDFTILQEDHPLMSFSVDKADRLALLNVANQGVHLWDLQDRCLVRRFQGV 497
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
TQG FTIHSCFGG NQDFVASGSED KVY+WH+KRELPIA L+GH+RTV+CV+WNPVYHQ
Sbjct: 498 TQGHFTIHSCFGGVNQDFVASGSEDTKVYVWHIKRELPIAILTGHSRTVNCVSWNPVYHQ 557
Query: 574 MIASVSDDCTVRIWGP 589
M+ASVSDDCTVRIWGP
Sbjct: 558 MMASVSDDCTVRIWGP 573
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380020160|ref|XP_003693962.1| PREDICTED: WD repeat-containing protein 26-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/556 (67%), Positives = 453/556 (81%), Gaps = 16/556 (2%)
Query: 48 MQANGS-----GPSNHLNGN----THNGVPEINGEVPA--PAVKTMTRTDEDIVRLIGQY 96
+Q NGS GP H NGN + N + +NGE K M +T++DIVRLIGQ+
Sbjct: 20 LQQNGSTADSGGP--HANGNMIPESDNDINGVNGETNQNLGPPKIMDKTNQDIVRLIGQH 77
Query: 97 LRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLD-SRGDLV 155
L+T+GL+RTADLLMQESGC+LDHP+AAKFRQH+MDGDW+KA+HDL++L+ L+ + L+
Sbjct: 78 LKTVGLNRTADLLMQESGCRLDHPAAAKFRQHVMDGDWTKAEHDLSELKTFLNGANQSLI 137
Query: 156 EMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERA 215
EMKFL+LEQKYLEYLE+G V++ALHVLRNELTPL HNT +VH+LS+FMMCSG ++L RA
Sbjct: 138 EMKFLLLEQKYLEYLEEGLVMEALHVLRNELTPLGHNTGRVHQLSAFMMCSGRDELQTRA 197
Query: 216 KWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLEN 275
WDGKG+ SR LMD+LQ +LPP++MLPPRRL +LL QAV++Q C YH T SLEN
Sbjct: 198 GWDGKGAVSRAALMDRLQKYLPPSIMLPPRRLHSLLCQAVEMQNQQCTYHVTHTQTSLEN 257
Query: 276 VSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF 335
VSLLVDH C+KE+FPC T QVLN+HCDEVW+CKFSPDG KLATGSKD TVIIWDVDP T
Sbjct: 258 VSLLVDHSCSKEQFPCHTIQVLNNHCDEVWYCKFSPDGRKLATGSKDMTVIIWDVDPETL 317
Query: 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPED 393
HRKTLEGHT GVA +AWSPDSS L+ GPEDC ELW+W+I+ LR + S +D
Sbjct: 318 RVTHRKTLEGHTYGVALIAWSPDSSLLIACGPEDCPELWLWSIDPPDYELRATVTQSTDD 377
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
SLT+C+W D KFV GG+RGQFYQ DIEG V +SWEGVRV CLWC++DGK+VLAAD+HH
Sbjct: 378 SLTACAWYPDSRKFVAGGLRGQFYQFDIEGNVSESWEGVRVKCLWCKNDGKTVLAADSHH 437
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
RIR YNF+ L D +LQEDHP+MSF+++ DRLALLNV+ QGVHLWDL+DR L+R+FQGV
Sbjct: 438 RIRGYNFDELCDFTILQEDHPLMSFSVNKADRLALLNVANQGVHLWDLQDRCLVRRFQGV 497
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
TQG FTIHSCFGG NQDF+ASGSED KVY+WH+KRELPIA L+GH+RTV+CV+WNPVYHQ
Sbjct: 498 TQGHFTIHSCFGGVNQDFIASGSEDTKVYVWHIKRELPIAILTGHSRTVNCVSWNPVYHQ 557
Query: 574 MIASVSDDCTVRIWGP 589
M+ASVSDDCTVRIWGP
Sbjct: 558 MMASVSDDCTVRIWGP 573
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383860698|ref|XP_003705826.1| PREDICTED: WD repeat-containing protein 26-like isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/556 (67%), Positives = 452/556 (81%), Gaps = 16/556 (2%)
Query: 48 MQANGS-----GPSNHLNGN----THNGVPEINGEVPA--PAVKTMTRTDEDIVRLIGQY 96
+Q NGS GP H NGN + N + +NGE K M +T++DIVRLIGQ+
Sbjct: 20 LQQNGSTADSGGP--HANGNVIPESDNDINGVNGETNQNLGPPKVMDKTNQDIVRLIGQH 77
Query: 97 LRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLD-SRGDLV 155
L+T+GL+RTADLLMQESGC+LDHP+AAKFRQH+MDGDW+KA+HDL++L+ L+ + LV
Sbjct: 78 LKTVGLNRTADLLMQESGCRLDHPAAAKFRQHVMDGDWTKAEHDLSELKTFLNGANQSLV 137
Query: 156 EMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERA 215
EMKFL+LEQKYLEYLE+G VL+AL VLRNELTPL HNT +VH+LS+FMMCSG ++L RA
Sbjct: 138 EMKFLLLEQKYLEYLEEGLVLEALQVLRNELTPLGHNTGRVHQLSAFMMCSGRDELQTRA 197
Query: 216 KWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLEN 275
WDGKG+ SR LMD+LQ +LPP++MLPPRRL +LL QAV++Q C YH T SLEN
Sbjct: 198 GWDGKGAVSRAALMDRLQKYLPPSIMLPPRRLHSLLCQAVEMQNQQCTYHVTHTQTSLEN 257
Query: 276 VSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF 335
VSLLVDH C+KE+FPC T QVLN+HCDEVW+CKFSPDG KLATGSKD TVIIWDVDP T
Sbjct: 258 VSLLVDHSCSKEQFPCHTIQVLNNHCDEVWYCKFSPDGRKLATGSKDMTVIIWDVDPETL 317
Query: 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPED 393
HRKTLEGHT GVA +AWSPDSS L+ GPEDC ELW+W+I+ LR + + +D
Sbjct: 318 RVTHRKTLEGHTYGVALIAWSPDSSLLIACGPEDCPELWLWSIDPPDYELRATVTQNTDD 377
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
SLT+C+W D KFV GG+RGQFYQ DIEG V +SWEGVRV CLWC++DGK+VLAAD+HH
Sbjct: 378 SLTACAWYPDSRKFVAGGLRGQFYQFDIEGNVSESWEGVRVKCLWCKNDGKTVLAADSHH 437
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
RIR YNF+ L D +LQEDHP+MSF+++ DRLALLNV+ QGVHLWDL+DR L+R+FQGV
Sbjct: 438 RIRGYNFDDLCDFTILQEDHPLMSFSVNKADRLALLNVANQGVHLWDLQDRCLVRRFQGV 497
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
TQG FTIHSCFGG NQDF+ASGSED KVY+WH+KRELPIA L+GH+RTV+CV+WNPVYHQ
Sbjct: 498 TQGHFTIHSCFGGVNQDFIASGSEDTKVYVWHIKRELPIAILTGHSRTVNCVSWNPVYHQ 557
Query: 574 MIASVSDDCTVRIWGP 589
M+ASVSDDCTVRIWGP
Sbjct: 558 MMASVSDDCTVRIWGP 573
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193587325|ref|XP_001951316.1| PREDICTED: WD repeat-containing protein 26-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/558 (64%), Positives = 453/558 (81%), Gaps = 8/558 (1%)
Query: 33 LKKSRASVQASGQEDMQANGSGPSNHLNGNTHNGVPEINGEVPAPAVKTMTRTDEDIVRL 92
L+ + +Q +G D ++ S + GN +G+ + + R+ ++IVRL
Sbjct: 2 LQPTNGCLQHNGSVDQPSSSSTVNGSATGNG-------DGQEQSISCNIKGRSSQEIVRL 54
Query: 93 IGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLL-DSR 151
IGQ+L+ IGL++TA++LMQESGC+L+HP+A +FR H+MDG+W K + DLN+L+ L+ +S
Sbjct: 55 IGQHLKLIGLNQTAEVLMQESGCRLEHPAATQFRHHVMDGEWHKVNADLNELQALVGNSC 114
Query: 152 GDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQL 211
+MKFLI EQKYLEYLEDG+VLDALHVLRNELTPL HN KVH LSS+MMCSG ++L
Sbjct: 115 QYFSDMKFLICEQKYLEYLEDGKVLDALHVLRNELTPLQHNIDKVHILSSYMMCSGRDEL 174
Query: 212 LERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDE 271
++RA W+GKG +SRT LMD +Q FLPP +MLPP+RL LL+QAV+LQ+ C +HNT D+
Sbjct: 175 MKRANWEGKGHKSRTLLMDMIQQFLPPHIMLPPKRLHMLLTQAVELQRNQCLFHNTTFDD 234
Query: 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
S+E VSLL DH C+ E+ PCET Q+L +HCDEVWFC+FSP+G KLATGSKD ++II+DVD
Sbjct: 235 SIETVSLLTDHKCSLEQIPCETVQILTEHCDEVWFCRFSPNGKKLATGSKDASIIIYDVD 294
Query: 332 PVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391
P T T + TL+GH+ GV+YL+WSPD L+ GPEDC +LWVWN+ T +LR+KL+HS
Sbjct: 295 PETLTVEQSITLDGHSYGVSYLSWSPDGELLMACGPEDCPDLWVWNVSTGVLRLKLSHSS 354
Query: 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADT 451
+DSLT+CSW++DG KFVCGGIRGQFYQCD++G VLDSWEGVRVNCLWCRSDGK+VLAADT
Sbjct: 355 DDSLTACSWHKDGQKFVCGGIRGQFYQCDLDGAVLDSWEGVRVNCLWCRSDGKTVLAADT 414
Query: 452 HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511
RIR+YNF+ L+D NL+QEDHP+MSFT++ TDRLALLNV +QGVHLWDL+D+ L+RKFQ
Sbjct: 415 RQRIRSYNFDELSDQNLIQEDHPIMSFTVNKTDRLALLNVVSQGVHLWDLQDKCLVRKFQ 474
Query: 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVY 571
GVTQG F+IHSCFGG N DF+ASGSED KVY+WH+K ELPIATL+GHTR V+CV+WNPVY
Sbjct: 475 GVTQGHFSIHSCFGGVNHDFIASGSEDNKVYLWHIKHELPIATLTGHTRAVTCVSWNPVY 534
Query: 572 HQMIASVSDDCTVRIWGP 589
HQM+ASVSDDCTVRIWGP
Sbjct: 535 HQMLASVSDDCTVRIWGP 552
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 604 | ||||||
| MGI|MGI:1923825 | 641 | Wdr26 "WD repeat domain 26" [M | 0.860 | 0.811 | 0.643 | 6.3e-203 | |
| UNIPROTKB|Q9H7D7 | 661 | WDR26 "WD repeat-containing pr | 0.860 | 0.786 | 0.643 | 1e-202 | |
| UNIPROTKB|F1S8S6 | 660 | WDR26 "Uncharacterized protein | 0.860 | 0.787 | 0.643 | 1e-202 | |
| RGD|1565589 | 622 | Wdr26 "WD repeat domain 26" [R | 0.859 | 0.834 | 0.637 | 7.4e-200 | |
| UNIPROTKB|F1P3E7 | 684 | WDR26 "Uncharacterized protein | 0.716 | 0.633 | 0.683 | 1.2e-197 | |
| ZFIN|ZDB-GENE-041014-277 | 576 | wdr26b "WD repeat domain 26b" | 0.895 | 0.939 | 0.615 | 2.9e-197 | |
| UNIPROTKB|Q2TBM8 | 514 | WDR26 "WD repeat domain 26" [B | 0.794 | 0.933 | 0.661 | 1e-187 | |
| UNIPROTKB|F1PIR1 | 514 | WDR26 "Uncharacterized protein | 0.794 | 0.933 | 0.661 | 1e-187 | |
| FB|FBgn0037094 | 630 | CG7611 [Drosophila melanogaste | 0.973 | 0.933 | 0.553 | 6.8e-182 | |
| TAIR|locus:2159562 | 589 | AT5G08560 "AT5G08560" [Arabido | 0.899 | 0.921 | 0.345 | 1.3e-82 |
| MGI|MGI:1923825 Wdr26 "WD repeat domain 26" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1916 (679.5 bits), Expect = 6.3e-203, Sum P(2) = 6.3e-203
Identities = 346/538 (64%), Positives = 434/538 (80%)
Query: 68 PEINGEVPAPAVKTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQ 127
PE+ + K ++++DED++RLIGQ+L +GL++T DLLMQESGC+L+HPSA KFR
Sbjct: 88 PELGSSLKKK--KRLSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRN 145
Query: 128 HIMDGDWSKADHDLNDLEYLLDS------RGDL----------VEMKFLILEQKYLEYLE 171
H+M+GDW KA++DLN+L+ L+ S RG L V MKFL+L+QKYLEYLE
Sbjct: 146 HVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLE 205
Query: 172 DGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDK 231
DG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L +A+W+GKG+ SR+KL+DK
Sbjct: 206 DGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDK 265
Query: 232 LQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPC 291
LQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D +L++VSLL+DH+C++ +FPC
Sbjct: 266 LQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPC 325
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW VDP T + KTLEGH GV+
Sbjct: 326 YTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVS 385
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
Y+AWSPD S+L+ GP+DC ELW+WN++T LR K++ S EDSLTS +WN DG +FV GG
Sbjct: 386 YIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGG 445
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
RGQFYQCD++G +LDSWEGVRV CLWC SDGK+VLA+DTH R+R YNFE LTD N++QE
Sbjct: 446 QRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFEDLTDRNIVQE 505
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
DHP+MSFTI RLALLNV+TQGVHLWDL+DR+L+RK+QGVTQG +TIHSCFGG N+DF
Sbjct: 506 DHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDF 565
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
+ASGSED KVYIWH + ELPIA L+GHTRTV+CV+WNP M+AS SDD TVRIWGP
Sbjct: 566 IASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGP 623
|
|
| UNIPROTKB|Q9H7D7 WDR26 "WD repeat-containing protein 26" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1914 (678.8 bits), Expect = 1.0e-202, Sum P(2) = 1.0e-202
Identities = 346/538 (64%), Positives = 434/538 (80%)
Query: 68 PEINGEVPAPAVKTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQ 127
PE+ + K ++++DED++RLIGQ+L +GL++T DLLMQESGC+L+HPSA KFR
Sbjct: 108 PELGSSLKKK--KRLSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRN 165
Query: 128 HIMDGDWSKADHDLNDLEYLLDS------RGDL----------VEMKFLILEQKYLEYLE 171
H+M+GDW KA++DLN+L+ L+ S RG L V MKFL+L+QKYLEYLE
Sbjct: 166 HVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLE 225
Query: 172 DGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDK 231
DG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L +A+W+GKG+ SR+KL+DK
Sbjct: 226 DGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDK 285
Query: 232 LQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPC 291
LQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D +L++VSLL+DH+C++ +FPC
Sbjct: 286 LQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPC 345
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW VDP T + KTLEGH GV+
Sbjct: 346 YTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVS 405
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
Y+AWSPD ++L+ GP+DC ELW+WN++T LR K++ S EDSLTS +WN DG +FV GG
Sbjct: 406 YIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGG 465
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
RGQFYQCD++G +LDSWEGVRV CLWC SDGK+VLA+DTH RIR YNFE LTD N++QE
Sbjct: 466 QRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFEDLTDRNIVQE 525
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
DHP+MSFTI RLALLNV+TQGVHLWDL+DR+L+RK+QGVTQG +TIHSCFGG N+DF
Sbjct: 526 DHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDF 585
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
+ASGSED KVYIWH + ELPIA L+GHTRTV+CV+WNP M+AS SDD TVRIWGP
Sbjct: 586 IASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGP 643
|
|
| UNIPROTKB|F1S8S6 WDR26 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1914 (678.8 bits), Expect = 1.0e-202, Sum P(2) = 1.0e-202
Identities = 346/538 (64%), Positives = 434/538 (80%)
Query: 68 PEINGEVPAPAVKTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQ 127
PE+ + K ++++DED++RLIGQ+L +GL++T DLLMQESGC+L+HPSA KFR
Sbjct: 107 PELGSSLKKK--KRLSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRN 164
Query: 128 HIMDGDWSKADHDLNDLEYLLDS------RGDL----------VEMKFLILEQKYLEYLE 171
H+M+GDW KA++DLN+L+ L+ S RG L V MKFL+L+QKYLEYLE
Sbjct: 165 HVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLE 224
Query: 172 DGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDK 231
DG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L +A+W+GKG+ SR+KL+DK
Sbjct: 225 DGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDK 284
Query: 232 LQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPC 291
LQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D +L++VSLL+DH+C++ +FPC
Sbjct: 285 LQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPC 344
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW VDP T + KTLEGH GV+
Sbjct: 345 YTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVS 404
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
Y+AWSPD ++L+ GP+DC ELW+WN++T LR K++ S EDSLTS +WN DG +FV GG
Sbjct: 405 YIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGG 464
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
RGQFYQCD++G +LDSWEGVRV CLWC SDGK+VLA+DTH RIR YNFE LTD N++QE
Sbjct: 465 QRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFEDLTDRNIVQE 524
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
DHP+MSFTI RLALLNV+TQGVHLWDL+DR+L+RK+QGVTQG +TIHSCFGG N+DF
Sbjct: 525 DHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDF 584
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
+ASGSED KVYIWH + ELPIA L+GHTRTV+CV+WNP M+AS SDD TVRIWGP
Sbjct: 585 IASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGP 642
|
|
| RGD|1565589 Wdr26 "WD repeat domain 26" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1889 (670.0 bits), Expect = 7.4e-200, Sum P(2) = 7.4e-200
Identities = 343/538 (63%), Positives = 431/538 (80%)
Query: 68 PEINGEVPAPAVKTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQ 127
PE+ + K ++++DED++RLIGQ+L +GL +T DLLMQ +GC+L+HPSA KFR
Sbjct: 70 PELGSSLKKK--KRLSQSDEDVIRLIGQHLNGLGLXQTVDLLMQ-AGCRLEHPSATKFRN 126
Query: 128 HIMDGDWSKADHDLNDLEYLLDS------RGDL----------VEMKFLILEQKYLEYLE 171
H+M+GDW KA++DLN+L+ L+ S RG L V MKFL+L+QKYLEYLE
Sbjct: 127 HVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLE 186
Query: 172 DGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDK 231
DG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L +A+W+GKG+ SR+KL+DK
Sbjct: 187 DGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGAASRSKLLDK 246
Query: 232 LQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPC 291
LQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D +L++VSLL+DH+C++ +FPC
Sbjct: 247 LQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPC 306
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T Q+L +HC+EVWFCKFS DG KLATGSKDTTVI+W VD T + KTLEGH GV+
Sbjct: 307 YTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIVWQVDADTHLLKLLKTLEGHAYGVS 366
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
Y+AWSPD S+L+ GP+DC ELW+WN++T LR K++ S EDSLTS +WN DG +FV GG
Sbjct: 367 YIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGG 426
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
RGQFYQCD++G +LDSWEGVRV CLWC SDGK+VLA+DTH RIR YNFE LTD N++QE
Sbjct: 427 QRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFEDLTDRNIVQE 486
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
DHP+MSFTI RLALLNV+TQGVHLWDL+DR+L+RK+QGVTQG +TIHSCFGG N+DF
Sbjct: 487 DHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDF 546
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
+ASGSED KVYIWH + ELPIA L+GHTRTV+CV+WNP M+AS SDD TVRIWGP
Sbjct: 547 IASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGP 604
|
|
| UNIPROTKB|F1P3E7 WDR26 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1681 (596.8 bits), Expect = 1.2e-197, Sum P(2) = 1.2e-197
Identities = 296/433 (68%), Positives = 363/433 (83%)
Query: 157 MKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAK 216
MKFL+L+QKYLEYLEDG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L +A+
Sbjct: 234 MKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAE 293
Query: 217 WDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLENV 276
W+GKG+ SR+KL+DKLQ++LPP+VMLPPRRLQ LL QAV+LQ+ C YHNTK+D +L++V
Sbjct: 294 WEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQNLLRQAVELQRDRCLYHNTKLDSNLDSV 353
Query: 277 SLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT 336
SLL+DH+C++++FPC T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW VDP T
Sbjct: 354 SLLIDHVCSRKQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQ 413
Query: 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT 396
+ KTLEGH GV+Y+AWSPD ++L+ GP+DC ELW+WN++T LR K++ S EDSLT
Sbjct: 414 LKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLT 473
Query: 397 SCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIR 456
S +WN DG +FV GG RGQFYQCD+ G +LDSWEGVRV CLWC SDGK+VLA+DTH RIR
Sbjct: 474 SVAWNPDGKRFVTGGQRGQFYQCDLNGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIR 533
Query: 457 TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516
YNFE LTD N++QEDHP+MSFTI RLALLNV+TQGVHLWDL+DR+L+RK+QGVTQG
Sbjct: 534 GYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQG 593
Query: 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576
+TIHSCFGG N+DF+ASGSED KVYIWH + ELPIA L+GHTRTV+CV+WNP M+A
Sbjct: 594 FYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMA 653
Query: 577 SVSDDCTVRIWGP 589
S SDD TVRIWGP
Sbjct: 654 SASDDGTVRIWGP 666
|
|
| ZFIN|ZDB-GENE-041014-277 wdr26b "WD repeat domain 26b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1910 (677.4 bits), Expect = 2.9e-197, P = 2.9e-197
Identities = 342/556 (61%), Positives = 441/556 (79%)
Query: 48 MQANGSG-----PSNHLNGNTHNGVPEINGEVPAPA---------VKTMTRTDEDIVRLI 93
MQ+NG+G P+N NG+ NG+ G + K +++ +ED++RLI
Sbjct: 1 MQSNGTGQEQNHPANTQNGDA-NGLQSNAGSASGASGTGSGSLKKKKRLSQAEEDVIRLI 59
Query: 94 GQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGD 153
GQ+L +GL++T DLLMQESGC+L+H SA KFR H+M+G+W KA++DLN+L+ L+ S
Sbjct: 60 GQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNELKALMHSPNA 119
Query: 154 LVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLE 213
+V MKFL+L+QKYLEYLEDG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L
Sbjct: 120 IVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLKYNTDRIHVLSGYLMCSHAEDLKA 179
Query: 214 RAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESL 273
+A+W+GKG+ SR +L+DKLQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D SL
Sbjct: 180 KAEWEGKGAGSRCRLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDSSL 239
Query: 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV 333
++VSLL+DH+C++++FPC T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW V+P
Sbjct: 240 DSVSLLLDHVCSRKQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVEPD 299
Query: 334 TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPED 393
T + +TLEGH GV+YLAWSPD +L+ GP+DC ELW+WN++T LR K++ S ED
Sbjct: 300 THQLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHED 359
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
SLTS +WN DG +FV GG RGQFYQCD++G +L+SWEGVRV CLWC DG++VLA+DTH
Sbjct: 360 SLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLESWEGVRVQCLWCMGDGRTVLASDTHQ 419
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
RIR Y+FE LTD N++QEDHP+MSFT+ RLALLNV+TQGVHLWDL+DR+L+RK+QGV
Sbjct: 420 RIRGYSFEDLTDRNIVQEDHPIMSFTVSKNGRLALLNVATQGVHLWDLQDRVLVRKYQGV 479
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
TQG +TIHSCFGG N+DF+ASGSED KVYIWH + ELPI L+GHTRTV+CV+WNP
Sbjct: 480 TQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGHTRTVNCVSWNPCIPS 539
Query: 574 MIASVSDDCTVRIWGP 589
++AS SDD TVRIWGP
Sbjct: 540 LMASASDDGTVRIWGP 555
|
|
| UNIPROTKB|Q2TBM8 WDR26 "WD repeat domain 26" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1820 (645.7 bits), Expect = 1.0e-187, P = 1.0e-187
Identities = 328/496 (66%), Positives = 404/496 (81%)
Query: 110 MQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDS------RGDL--------- 154
MQESGC+L+HPSA KFR H+M+GDW KA++DLN+L+ L+ S RG L
Sbjct: 1 MQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGI 60
Query: 155 -VEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLE 213
V MKFL+L+QKYLEYLEDG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L
Sbjct: 61 IVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRA 120
Query: 214 RAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESL 273
+A+W+GKG+ SR+KL+DKLQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D +L
Sbjct: 121 KAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDSNL 180
Query: 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV 333
++VSLL+DH+C++ +FPC T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW VDP
Sbjct: 181 DSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPD 240
Query: 334 TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPED 393
T + KTLEGH GV+Y+AWSPD ++L+ GP+DC ELW+WN++T LR K++ S ED
Sbjct: 241 THLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHED 300
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
SLTS +WN DG +FV GG RGQFYQCD++G +LDSWEGVRV CLWC SDGK+VLA+DTH
Sbjct: 301 SLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQ 360
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
RIR YNFE LTD N++QEDHP+MSFTI RLALLNV+TQGVHLWDL+DR+L+RK+QGV
Sbjct: 361 RIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGV 420
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
TQG +TIHSCFGG N+DF+ASGSED KVYIWH + ELPIA L+GHTRTV+CV+WNP
Sbjct: 421 TQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPS 480
Query: 574 MIASVSDDCTVRIWGP 589
M+AS SDD TVRIWGP
Sbjct: 481 MMASASDDGTVRIWGP 496
|
|
| UNIPROTKB|F1PIR1 WDR26 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1820 (645.7 bits), Expect = 1.0e-187, P = 1.0e-187
Identities = 328/496 (66%), Positives = 404/496 (81%)
Query: 110 MQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDS------RGDL--------- 154
MQESGC+L+HPSA KFR H+M+GDW KA++DLN+L+ L+ S RG L
Sbjct: 1 MQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGI 60
Query: 155 -VEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLE 213
V MKFL+L+QKYLEYLEDG+VL+AL VLR ELTPL +NT ++H LS ++MCS E L
Sbjct: 61 IVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRA 120
Query: 214 RAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESL 273
+A+W+GKG+ SR+KL+DKLQ++LPP+VMLPPRRLQTLL QAV+LQ+ C YHNTK+D +L
Sbjct: 121 KAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNNL 180
Query: 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV 333
++VSLL+DH+C++ +FPC T Q+L +HC+EVWFCKFS DG KLATGSKDTTVIIW VDP
Sbjct: 181 DSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPD 240
Query: 334 TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPED 393
T + KTLEGH GV+Y+AWSPD ++L+ GP+DC ELW+WN++T LR K++ S ED
Sbjct: 241 THLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHED 300
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
SLTS +WN DG +FV GG RGQFYQCD++G +LDSWEGVRV CLWC SDGK+VLA+DTH
Sbjct: 301 SLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQ 360
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
RIR YNFE LTD N++QEDHP+MSFTI RLALLNV+TQGVHLWDL+DR+L+RK+QGV
Sbjct: 361 RIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGV 420
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
TQG +TIHSCFGG N+DF+ASGSED KVYIWH + ELPIA L+GHTRTV+CV+WNP
Sbjct: 421 TQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPS 480
Query: 574 MIASVSDDCTVRIWGP 589
M+AS SDD TVRIWGP
Sbjct: 481 MMASASDDGTVRIWGP 496
|
|
| FB|FBgn0037094 CG7611 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1765 (626.4 bits), Expect = 6.8e-182, P = 6.8e-182
Identities = 332/600 (55%), Positives = 438/600 (73%)
Query: 13 GQYLRTIGLDGDS-DDGAPPPLKKSRASVQASGQEDMQANGSGPSNHLNGNTHNGVP-EI 70
G + DG S DD + S A+ D + NG +N NG++ V E
Sbjct: 24 GGSAENVARDGGSGDDSVGIGDENPSGSSAATNGHDSKHNGFIVNN--NGSSSRIVDGEN 81
Query: 71 NGEVPAPAVKTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIM 130
N E + + + +++++I+RLIGQYL +GLD++ LM ESGC L+HPSA KFR+H++
Sbjct: 82 NRENTSCSGVQLDKSNQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVL 141
Query: 131 DGDWSKADHDLNDLEYLLDSR--GDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTP 188
GDWSKAD DL DLE L+D+ + EMKF++LEQKYLE+L+DG LDALHVLR+ELTP
Sbjct: 142 MGDWSKADSDLKDLEPLIDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSELTP 201
Query: 189 LNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLPPRRLQ 248
L HN +VH+LSS+MMCS + L +RAKW+GKG SR +M++LQ+F+PP+VM+ PRRL+
Sbjct: 202 LQHNITRVHQLSSYMMCSTNQDLYQRAKWEGKGILSRALVMERLQTFMPPSVMMSPRRLR 261
Query: 249 TLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCK 308
TLL QAV+LQ HCP H+ + +LE VSLL DH CT + FP +T Q+L DHCDEVWFCK
Sbjct: 262 TLLQQAVELQSQHCPCHDMAWETNLETVSLLTDHCCTTDGFPMQTIQILTDHCDEVWFCK 321
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGP 367
FSPDGLKLATGSKD+TVIIWDVDP T +HR+ L+G L V++++WSPDS +LV G
Sbjct: 322 FSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDSKLILVGGT 381
Query: 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427
ED HEL++WN++ L VK + S EDSL +++RDG +FVCGG +GQ Y CD+ G ++D
Sbjct: 382 EDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFVCGGQKGQLYLCDLNGTIVD 441
Query: 428 SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSNLLQEDHPVMSFTIDATDRL 486
SWEGVRVN + R+D K++LAAD H+RIR YNF+ +D ++L+E HP+M+F+I++ DRL
Sbjct: 442 SWEGVRVNSIAFRADNKTILAADNHYRIRGYNFDSPRSDFDILREPHPIMTFSINSADRL 501
Query: 487 ALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546
ALLNVS QG+HLWD+ D+ L+R+FQG+ Q F IHSCFGG N+ FVASGSED VYIWH+
Sbjct: 502 ALLNVSNQGLHLWDIEDKCLVRRFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIWHI 561
Query: 547 KRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN----TNKSPHLASS 602
KRE P+A L+GHT+TV+CV+WNPVY ++AS SDD TVRIWGP N T +S +SS
Sbjct: 562 KREEPLAKLAGHTKTVNCVSWNPVYPSLLASASDDATVRIWGPKPNGSSATTESDDCSSS 621
|
|
| TAIR|locus:2159562 AT5G08560 "AT5G08560" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 196/567 (34%), Positives = 311/567 (54%)
Query: 31 PPLKKS-RASVQASG-QEDMQANGSGP-SNHLNGNTHNGVPEINGEVPAPAVKTMTRTDE 87
PPLK++ R + + +G + GS SN L +P G+ K + R E
Sbjct: 9 PPLKRAKRLADEPNGFSANSSVRGSSVNSNSLGDLMARPLPS-QGDDETIGSKGVIRKSE 67
Query: 88 DIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYL 147
VR+I + L ++G D+T +L +ESG L + + F Q + DG W ++ L+ + +
Sbjct: 68 -FVRIITRALYSLGYDKTGAMLEEESGISLHNSTIKLFLQQVKDGKWDQSVKTLHRIGFP 126
Query: 148 LDSRGDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSG 207
D + + FL+LEQK+LE+L+ ++ DAL LRNE+ PL NT +VHEL+S ++ S
Sbjct: 127 -DEKA-VKAASFLLLEQKFLEFLKVEKIADALRTLRNEMAPLRINTKRVHELASSLI-SP 183
Query: 208 VEQLLERAKWDGKGS-QSRTKLMDKLQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHN 266
+ GK S SR+K++++LQ+ LP +V++P +RL+ L+ ++ +Q+ C +HN
Sbjct: 184 SSFISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEKRLECLVENSLHIQRDSCVFHN 243
Query: 267 TKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI 326
T +D L SL DH C K + P +T Q+L H DEVWF +FS +G LA+ SKD T I
Sbjct: 244 T-LDSDL---SLYSDHQCGKHQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAI 299
Query: 327 IWDVDPVT-FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV 385
IW++ + +H TL GH V + WSPD +L G E+ + W++++ V
Sbjct: 300 IWEISADGHISLKH--TLVGHHKPVIAILWSPDDRQVLTCGAEEV--IRRWDVDSGDC-V 354
Query: 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVR---VNCLWCRSD 442
+ S SC W DG + G D++G+ + W+G R V+ + D
Sbjct: 355 HMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDD 414
Query: 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502
GK +++ I ++ E T L++E+ + SF++ ++ L+N+ Q + LW++
Sbjct: 415 GKWLVSVCKDSVISLFDRE-ATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIE 473
Query: 503 -DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561
D ++ +++G + +F I SCFGG Q F+ASGSED +VYIWH I L GH
Sbjct: 474 GDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGA 533
Query: 562 VSCVAWNPVYHQMIASVSDDCTVRIWG 588
V+CV+W+P M+AS SDD T+RIWG
Sbjct: 534 VNCVSWSPTNLHMLASASDDGTIRIWG 560
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9H7D7 | WDR26_HUMAN | No assigned EC number | 0.6539 | 0.8443 | 0.7715 | yes | N/A |
| Q8C6G8 | WDR26_MOUSE | No assigned EC number | 0.6539 | 0.8443 | 0.7956 | yes | N/A |
| Q9UT85 | YIPC_SCHPO | No assigned EC number | 0.3268 | 0.7947 | 0.9467 | yes | N/A |
| Q7K0L4 | WDR26_DROME | No assigned EC number | 0.5652 | 0.9403 | 0.9015 | yes | N/A |
| Q5SP67 | WDR26_DANRE | No assigned EC number | 0.6122 | 0.8940 | 0.9375 | yes | N/A |
| Q28D01 | WDR26_XENTR | No assigned EC number | 0.6122 | 0.8956 | 0.8811 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 604 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-32 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-22 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-20 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-20 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-18 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-16 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-15 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 8e-13 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 9e-08 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-07 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 2e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-06 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 1e-05 | |
| smart00668 | 58 | smart00668, CTLH, C-terminal to LisH motif | 2e-05 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 3e-05 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 3e-04 | |
| COG0823 | 425 | COG0823, TolB, Periplasmic component of the Tol bi | 4e-04 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 0.002 | |
| smart00667 | 34 | smart00667, LisH, Lissencephaly type-1-like homolo | 0.002 | |
| PRK00178 | 430 | PRK00178, tolB, translocation protein TolB; Provis | 0.003 | |
| TIGR02800 | 417 | TIGR02800, propeller_TolB, tol-pal system beta pro | 0.004 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 8e-32
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
H V S DG LA+GS D T+ +WD++ T + +TL GHT V+ +A+SPD
Sbjct: 50 HTGPVRDVAASADGTYLASGSSDKTIRLWDLE----TGECVRTLTGHTSYVSSVAFSPDG 105
Query: 360 SHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ 418
+L D + VW++ET + L H D + S +++ DGT FV
Sbjct: 106 -RILSSSSRDK-TIKVWDVETGKCLTTLRGH--TDWVNSVAFSPDGT-FVASS------- 153
Query: 419 CDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMS 477
S +G +++ W T + T L V S
Sbjct: 154 ---------SQDGTIKL---W---------DLRTGKCVAT----------LTGHTGEVNS 182
Query: 478 FTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537
L + S + LWDL L +G G ++S + +ASGSE
Sbjct: 183 VAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG---VNSVAFSPDGYLLASGSE 239
Query: 538 DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
DG + +W ++ + TLSGHT +V+ +AW+P + +AS S D T+RIW
Sbjct: 240 DGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDG-KRLASGSADGTIRIW 288
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (249), Expect = 2e-22
Identities = 85/311 (27%), Positives = 132/311 (42%), Gaps = 20/311 (6%)
Query: 286 KEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLE 344
P + + L H + V FSPDG LA+GS D T+ +WD+ TL
Sbjct: 140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPL----STLA 195
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG 404
GHT V+ LA+SPD L+ G D + +W++ T L DS+ S ++ DG
Sbjct: 196 GHTDPVSSLAFSPDGGLLIASGSSD-GTIRLWDLSTGKLLRSTLSGHSDSVVSS-FSPDG 253
Query: 405 TKFVCGGIRGQFYQCDIEGQ----VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNF 460
+ G G D+ S V + DGK + + + +R ++
Sbjct: 254 SLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDL 313
Query: 461 EHLTDS---NLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQG 516
E L + PV S + L + S G + LWDLR L+ +G +
Sbjct: 314 ETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN- 372
Query: 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576
+ S + V+SGS DG V +W + + L GHT V+ + ++P + +A
Sbjct: 373 ---VLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSP-DGKSLA 428
Query: 577 SVSDDCTVRIW 587
S S D T+R+W
Sbjct: 429 SGSSDNTIRLW 439
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 94.4 bits (233), Expect = 2e-20
Identities = 76/298 (25%), Positives = 121/298 (40%), Gaps = 48/298 (16%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
+ +L H D + FSPDG L +GS D T+ +WD+D + H V+ L
Sbjct: 58 SLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLD--NGEKLIKSLEGLHDSSVSKL 115
Query: 354 AW-SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412
A SPD + +L+ + +W++ T ++ +S+TS +++ DG G
Sbjct: 116 ALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS- 174
Query: 413 RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472
LW GK + H
Sbjct: 175 -----------------SLDGTIKLWDLRTGKPLSTLAGHTD------------------ 199
Query: 473 HPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLR-KFQGVTQGQFTIHSCFGGANQD 530
PV S L + + S+ G + LWDL LLR G + + S +
Sbjct: 200 -PVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFS----PDGS 254
Query: 531 FVASGSEDGKVYIWHVKREL-PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ASGS DG + +W ++ + TLSGH+ +V VA++P +++AS S D TVR+W
Sbjct: 255 LLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDG-KLLASGSSDGTVRLW 311
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 4e-20
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 49/251 (19%)
Query: 339 HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTS 397
R+TL+GHT GV +A+SPD LL G D + VW++ET ELLR H+ +
Sbjct: 1 LRRTLKGHTGGVTCVAFSPD-GKLLATGSGD-GTIKVWDLETGELLRTLKGHT--GPVRD 56
Query: 398 CSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRT 457
+ + DGT G D +R+ W G+ +RT
Sbjct: 57 VAASADGTYLASGS--------------SDK--TIRL---WDLETGEC---------VRT 88
Query: 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQG 516
H V S R+ L + S + +WD+ L +G T
Sbjct: 89 L-TGH---------TSYVSSVAFSPDGRI-LSSSSRDKTIKVWDVETGKCLTTLRGHTD- 136
Query: 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576
++S + FVAS S+DG + +W ++ +ATL+GHT V+ VA++P ++++
Sbjct: 137 --WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLS 194
Query: 577 SVSDDCTVRIW 587
S S D T+++W
Sbjct: 195 S-SSDGTIKLW 204
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 88.2 bits (217), Expect = 2e-18
Identities = 68/272 (25%), Positives = 107/272 (39%), Gaps = 16/272 (5%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ L H D V FSPDG L +A+GS D T+ +WD+ T R TL GH+
Sbjct: 189 KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS--TGKL-LRSTLSGHS-DS 244
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
++SPD S L + + +W++ + ++ S+ S +++ DG G
Sbjct: 245 VVSSFSPDGSLLASGSSD--GTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASG 302
Query: 411 GIRGQFYQCDIEGQVLDSWEGV-----RVNCL-WCRSDGKSVLAADTHHRIRTYNFEHLT 464
G D+E L S + V+ L + V IR ++
Sbjct: 303 SSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362
Query: 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
L+ V+S + R+ + V LWDL LLR G T + S
Sbjct: 363 PLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT---SRVTSLD 419
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLS 556
+ +ASGS D + +W +K L + S
Sbjct: 420 FSPDGKSLASGSSDNTIRLWDLKTSLKSVSFS 451
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 1e-16
Identities = 62/253 (24%), Positives = 95/253 (37%), Gaps = 48/253 (18%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
E + L H V FSPDG L++ S+D T+ +WDV+ T C TL GHT V
Sbjct: 84 ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE--TGKCL--TTLRGHTDWVN 139
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+A+SPD + +D + +W++ T V + S +++ DG K +
Sbjct: 140 SVAFSPD-GTFVASSSQD-GTIKLWDLRTGKC-VATLTGHTGEVNSVAFSPDGEKLLSSS 196
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
G ++ LW S GK + T H
Sbjct: 197 SDGT----------------IK---LWDLSTGKC---------LGTL-RGH--------- 218
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
++ V S L + +WDLR ++ G T + S +
Sbjct: 219 ENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNS---VTSLAWSPDGKR 275
Query: 532 VASGSEDGKVYIW 544
+ASGS DG + IW
Sbjct: 276 LASGSADGTIRIW 288
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ L H EV FSPDG KL + S D T+ +WD+ T C TL GH GV
Sbjct: 167 GKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS--TGKCLG--TLRGHENGV 222
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
+A+SPD +LL G ED + VW++ T L +S+TS +W+ DG + G
Sbjct: 223 NSVAFSPD-GYLLASGSEDGT-IRVWDLRTGECVQTL-SGHTNSVTSLAWSPDGKRLASG 279
Query: 411 G 411
Sbjct: 280 S 280
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 70.5 bits (171), Expect = 8e-13
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 433 RVNCLWCRSDGKSVLAADTHHRIRTYNF---EHLTDSNLLQEDHPVMSFTIDATDRLALL 489
+ + DG+ +L+ + I+ ++ E L S D V + + D ++L
Sbjct: 67 SITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSIL 126
Query: 490 NVSTQG---VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGK 540
S+ V LWDL G HS F + + S DG
Sbjct: 127 LASSSLDGTVKLWDLST-------PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGT 179
Query: 541 VYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLA 600
+ +W ++ P++TL+GHT VS +A++P +IAS S D T+R+W + + L
Sbjct: 180 IKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLW----DLSTGKLLR 235
Query: 601 SSL 603
S+L
Sbjct: 236 STL 238
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 9e-08
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 551 PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ TL GHT V+ VA++P ++AS SDD TVR+W
Sbjct: 3 LLRTLKGHTGPVTSVAFSP-DGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-07
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 551 PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ TL GHT V+ VA++P + +AS SDD T+++W
Sbjct: 4 LLKTLKGHTGPVTSVAFSP-DGKYLASGSDDGTIKLW 39
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-07
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
+ + L H V FSPDG LA+GS D TV +WD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-06
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
+ L H V FSPDG LA+GS D T+ +WD
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 523 CFGGANQDFVASGSEDGKVYIWHVKREL--------PIATLSGHTRTVSCVAWNPVYHQM 574
CF + +ASGSED + +W + P L GH + +S + WNP+ + +
Sbjct: 85 CF----SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYI 140
Query: 575 IASVSDDCTVRIW 587
+ S D V IW
Sbjct: 141 MCSSGFDSFVNIW 153
|
Length = 568 |
| >gnl|CDD|128914 smart00668, CTLH, C-terminal to LisH motif | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 2e-05
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 121 SAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKYLEYLEDGRVLD 177
+ R+ I+ GDW +A L+ L+ L R +++F + +QK+LE + G++ +
Sbjct: 4 ERKRIRELILKGDWDEALEWLSSLKPPLLERNS--KLEFELRKQKFLELVRQGKLEE 58
|
Alpha-helical motif of unknown function. Length = 58 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.6 bits (109), Expect = 3e-05
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Query: 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
D SL D + + V FSPDG +++GS D TV +WD
Sbjct: 339 DGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWD 398
Query: 330 VDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH 389
+ + + L+GHT V L +SPD L + + +W+++T L V +
Sbjct: 399 LSTGSL----LRNLDGHTSRVTSLDFSPDGKSLASGS--SDNTIRLWDLKTSLKSVSFSP 452
Query: 390 S 390
Sbjct: 453 D 453
|
Length = 466 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 3e-04
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 520 IHSCFGGANQDFVA------SGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
I SC + FVA G G + + + R+ P+ L GHT ++ + +NP + +
Sbjct: 29 IDSCGIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSE 88
Query: 574 MIASVSDDCTVRIWG-PHLNTN 594
++AS S+D T+R+W PH + +
Sbjct: 89 ILASGSEDLTIRVWEIPHNDES 110
|
Length = 568 |
| >gnl|CDD|223893 COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTT----VIIWDVDPVTFTCQHRK-TLEGH 346
Q L D + +SPDG KLA S + + D++ + G+
Sbjct: 183 YNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLN---TGKRPVILNFNGN 239
Query: 347 TLGVAYLAWSPDSSHLLVVG-PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT 405
A+SPD S L + ++++ +++ + L +L + + TS SW+ DG+
Sbjct: 240 NG---APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLTNGFGIN-TSPSWSPDGS 294
Query: 406 KFVCGGIRG---QFYQCDIEGQ 424
K V RG Q Y D+EG
Sbjct: 295 KIVFTSDRGGRPQIYLYDLEGS 316
|
Length = 425 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 15/144 (10%)
Query: 308 KFSP-DGLKLATGSKDTTVIIWDV--DPVTFTC-QHRKTLEGHTLGVAYLAWSPDSSHLL 363
F+P D KL T S+D T++ W + + +T L+GHT V +++ P + ++L
Sbjct: 82 AFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVL 141
Query: 364 VVGPEDCHELWVWNIETEL-LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ---- 418
D + VW++E + V HS D +TS WN DG+ C + +
Sbjct: 142 ASAGAD-MVVNVWDVERGKAVEVIKCHS--DQITSLEWNLDGSLL-CTTSKDKKLNIIDP 197
Query: 419 --CDIEGQVLDSWEGVRVNCLWCR 440
I V CLW +
Sbjct: 198 RDGTIVSSVEAHASAKSQRCLWAK 221
|
Length = 493 |
| >gnl|CDD|128913 smart00667, LisH, Lissencephaly type-1-like homology motif | Back alignment and domain information |
|---|
Score = 35.5 bits (83), Expect = 0.002
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 87 EDIVRLIGQYLRTIGLDRTADLLMQESGCKL 117
++ RLI +YL G + TA+ L +ESG L
Sbjct: 4 SELNRLILEYLLRNGYEETAETLQKESGLSL 34
|
Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly. Length = 34 |
| >gnl|CDD|166839 PRK00178, tolB, translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 309 FSPDGLKLATGSKDT---TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV 365
+SPDG ++A S + + + ++D T + EG L A AWSPD S L V
Sbjct: 206 WSPDGKRIAYVSFEQKRPRIFVQNLD--TGRREQITNFEG--LNGA-PAWSPDGSKLAFV 260
Query: 366 GPEDCH-ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---QFYQCDI 421
+D + E++V ++ + L NH D T W +DG RG Q Y+ ++
Sbjct: 261 LSKDGNPEIYVMDLASRQLSRVTNHPAID--TEPFWGKDGRTLYFTSDRGGKPQIYKVNV 318
Query: 422 EG 423
G
Sbjct: 319 NG 320
|
Length = 430 |
| >gnl|CDD|234019 TIGR02800, propeller_TolB, tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 308 KFSPDGLKLA---TGSKDTTVIIWDVDPVTFTCQHRKTL--EGHTLGVAYLAWSPDSSHL 362
+SPDG KLA S + + D+ T Q K G A +SPD S L
Sbjct: 196 AWSPDGQKLAYVSFESGKPEIYVQDL----ATGQREKVASFPGMNGAPA---FSPDGSKL 248
Query: 363 LVV-GPEDCHELWVWNIETELLRVKLNHSPE-DSLTSCSWNRDGTKFVCGGIRG---QFY 417
V + +++V +++ + L +L + P D T SW+ DG RG Q Y
Sbjct: 249 AVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGID--TEPSWSPDGKSIAFTSDRGGSPQIY 305
Query: 418 QCDIEG--QVLDSWEG 431
D +G ++ G
Sbjct: 306 MMDADGGEARRLTFRG 321
|
Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 417 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 604 | |||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0275|consensus | 508 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0640|consensus | 430 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0288|consensus | 459 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG1407|consensus | 313 | 100.0 | ||
| KOG0313|consensus | 423 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0283|consensus | 712 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG1446|consensus | 311 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0643|consensus | 327 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0306|consensus | 888 | 99.98 | ||
| KOG0284|consensus | 464 | 99.98 | ||
| KOG0285|consensus | 460 | 99.98 | ||
| KOG0275|consensus | 508 | 99.97 | ||
| KOG0772|consensus | 641 | 99.97 | ||
| KOG0289|consensus | 506 | 99.97 | ||
| KOG0292|consensus | 1202 | 99.97 | ||
| KOG0645|consensus | 312 | 99.97 | ||
| KOG0265|consensus | 338 | 99.97 | ||
| KOG0276|consensus | 794 | 99.97 | ||
| KOG0316|consensus | 307 | 99.97 | ||
| KOG0266|consensus | 456 | 99.97 | ||
| KOG0296|consensus | 399 | 99.97 | ||
| KOG0306|consensus | 888 | 99.97 | ||
| KOG0268|consensus | 433 | 99.96 | ||
| KOG0281|consensus | 499 | 99.96 | ||
| KOG0292|consensus | 1202 | 99.96 | ||
| KOG0294|consensus | 362 | 99.96 | ||
| KOG0647|consensus | 347 | 99.96 | ||
| KOG1273|consensus | 405 | 99.96 | ||
| KOG2096|consensus | 420 | 99.96 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| KOG0274|consensus | 537 | 99.96 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG0973|consensus | 942 | 99.96 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0641|consensus | 350 | 99.96 | ||
| KOG0294|consensus | 362 | 99.96 | ||
| KOG0282|consensus | 503 | 99.96 | ||
| KOG0299|consensus | 479 | 99.95 | ||
| KOG0278|consensus | 334 | 99.95 | ||
| KOG0310|consensus | 487 | 99.95 | ||
| KOG1036|consensus | 323 | 99.95 | ||
| KOG0305|consensus | 484 | 99.95 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.95 | |
| KOG0274|consensus | 537 | 99.95 | ||
| KOG0300|consensus | 481 | 99.95 | ||
| KOG1408|consensus | 1080 | 99.95 | ||
| KOG0313|consensus | 423 | 99.94 | ||
| KOG0283|consensus | 712 | 99.94 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.94 | |
| KOG1446|consensus | 311 | 99.94 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.94 | |
| KOG0301|consensus | 745 | 99.94 | ||
| KOG1407|consensus | 313 | 99.94 | ||
| KOG0289|consensus | 506 | 99.94 | ||
| KOG0650|consensus | 733 | 99.94 | ||
| KOG2055|consensus | 514 | 99.94 | ||
| KOG0305|consensus | 484 | 99.94 | ||
| KOG0321|consensus | 720 | 99.93 | ||
| KOG0288|consensus | 459 | 99.93 | ||
| KOG0643|consensus | 327 | 99.93 | ||
| KOG0308|consensus | 735 | 99.93 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.93 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.93 | |
| KOG0973|consensus | 942 | 99.93 | ||
| KOG1539|consensus | 910 | 99.93 | ||
| KOG1539|consensus | 910 | 99.93 | ||
| KOG0277|consensus | 311 | 99.93 | ||
| KOG0639|consensus | 705 | 99.93 | ||
| KOG0640|consensus | 430 | 99.93 | ||
| KOG0647|consensus | 347 | 99.92 | ||
| KOG0264|consensus | 422 | 99.92 | ||
| KOG0299|consensus | 479 | 99.92 | ||
| KOG1036|consensus | 323 | 99.92 | ||
| KOG0310|consensus | 487 | 99.92 | ||
| KOG1408|consensus | 1080 | 99.92 | ||
| KOG1063|consensus | 764 | 99.92 | ||
| KOG1274|consensus | 933 | 99.92 | ||
| KOG0772|consensus | 641 | 99.92 | ||
| KOG1332|consensus | 299 | 99.92 | ||
| KOG2445|consensus | 361 | 99.92 | ||
| KOG0308|consensus | 735 | 99.92 | ||
| KOG4283|consensus | 397 | 99.92 | ||
| KOG0646|consensus | 476 | 99.91 | ||
| KOG0641|consensus | 350 | 99.91 | ||
| KOG0646|consensus | 476 | 99.91 | ||
| KOG0268|consensus | 433 | 99.91 | ||
| KOG4328|consensus | 498 | 99.91 | ||
| KOG2106|consensus | 626 | 99.9 | ||
| KOG0300|consensus | 481 | 99.9 | ||
| KOG2048|consensus | 691 | 99.9 | ||
| KOG1063|consensus | 764 | 99.89 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.89 | |
| KOG2106|consensus | 626 | 99.89 | ||
| KOG0639|consensus | 705 | 99.89 | ||
| KOG0269|consensus | 839 | 99.88 | ||
| KOG0301|consensus | 745 | 99.88 | ||
| KOG1445|consensus | 1012 | 99.88 | ||
| KOG1274|consensus | 933 | 99.88 | ||
| KOG2919|consensus | 406 | 99.88 | ||
| KOG1332|consensus | 299 | 99.87 | ||
| KOG0267|consensus | 825 | 99.87 | ||
| KOG4227|consensus | 609 | 99.86 | ||
| KOG1538|consensus | 1081 | 99.86 | ||
| KOG0267|consensus | 825 | 99.86 | ||
| KOG2048|consensus | 691 | 99.86 | ||
| KOG0264|consensus | 422 | 99.86 | ||
| KOG2055|consensus | 514 | 99.86 | ||
| KOG2096|consensus | 420 | 99.85 | ||
| KOG0269|consensus | 839 | 99.85 | ||
| KOG1334|consensus | 559 | 99.85 | ||
| KOG1009|consensus | 434 | 99.85 | ||
| KOG1310|consensus | 758 | 99.85 | ||
| KOG0302|consensus | 440 | 99.84 | ||
| KOG0270|consensus | 463 | 99.84 | ||
| KOG0322|consensus | 323 | 99.84 | ||
| KOG0307|consensus | 1049 | 99.84 | ||
| KOG4378|consensus | 673 | 99.84 | ||
| KOG4283|consensus | 397 | 99.84 | ||
| KOG0321|consensus | 720 | 99.83 | ||
| KOG1034|consensus | 385 | 99.83 | ||
| KOG1007|consensus | 370 | 99.82 | ||
| KOG0650|consensus | 733 | 99.82 | ||
| KOG0302|consensus | 440 | 99.82 | ||
| KOG1538|consensus | 1081 | 99.82 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.81 | |
| KOG1273|consensus | 405 | 99.81 | ||
| KOG1188|consensus | 376 | 99.81 | ||
| KOG4378|consensus | 673 | 99.8 | ||
| KOG2919|consensus | 406 | 99.8 | ||
| KOG0642|consensus | 577 | 99.8 | ||
| KOG4328|consensus | 498 | 99.8 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.8 | |
| KOG1240|consensus | 1431 | 99.79 | ||
| KOG1034|consensus | 385 | 99.79 | ||
| KOG0644|consensus | 1113 | 99.79 | ||
| KOG0270|consensus | 463 | 99.78 | ||
| KOG0290|consensus | 364 | 99.78 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.78 | |
| KOG0303|consensus | 472 | 99.78 | ||
| KOG1963|consensus | 792 | 99.77 | ||
| KOG0642|consensus | 577 | 99.77 | ||
| KOG1963|consensus | 792 | 99.76 | ||
| KOG1009|consensus | 434 | 99.76 | ||
| KOG1517|consensus | 1387 | 99.74 | ||
| KOG1587|consensus | 555 | 99.74 | ||
| KOG0649|consensus | 325 | 99.74 | ||
| KOG1445|consensus | 1012 | 99.73 | ||
| KOG1523|consensus | 361 | 99.73 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.73 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.73 | |
| KOG0771|consensus | 398 | 99.72 | ||
| KOG0307|consensus | 1049 | 99.72 | ||
| KOG2110|consensus | 391 | 99.7 | ||
| KOG4497|consensus | 447 | 99.7 | ||
| KOG1188|consensus | 376 | 99.69 | ||
| KOG2445|consensus | 361 | 99.69 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.67 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.67 | |
| KOG1524|consensus | 737 | 99.65 | ||
| KOG0290|consensus | 364 | 99.65 | ||
| KOG2394|consensus | 636 | 99.65 | ||
| KOG1240|consensus | 1431 | 99.64 | ||
| KOG1587|consensus | 555 | 99.64 | ||
| KOG0303|consensus | 472 | 99.64 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.64 | |
| KOG0649|consensus | 325 | 99.64 | ||
| KOG1007|consensus | 370 | 99.64 | ||
| KOG4227|consensus | 609 | 99.64 | ||
| KOG2110|consensus | 391 | 99.63 | ||
| KOG0644|consensus | 1113 | 99.63 | ||
| KOG2321|consensus | 703 | 99.62 | ||
| KOG4497|consensus | 447 | 99.62 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.61 | |
| KOG2111|consensus | 346 | 99.6 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.59 | |
| KOG1272|consensus | 545 | 99.59 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.59 | |
| KOG1517|consensus | 1387 | 99.58 | ||
| KOG1524|consensus | 737 | 99.58 | ||
| KOG1310|consensus | 758 | 99.58 | ||
| KOG0771|consensus | 398 | 99.58 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.58 | |
| KOG1523|consensus | 361 | 99.57 | ||
| KOG2139|consensus | 445 | 99.56 | ||
| KOG1354|consensus | 433 | 99.54 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.53 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.52 | |
| KOG1272|consensus | 545 | 99.52 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.51 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.51 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.51 | |
| KOG2315|consensus | 566 | 99.51 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.49 | |
| KOG3881|consensus | 412 | 99.49 | ||
| KOG2111|consensus | 346 | 99.49 | ||
| KOG2139|consensus | 445 | 99.48 | ||
| KOG2321|consensus | 703 | 99.47 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.47 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.47 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.47 | |
| KOG1832|consensus | 1516 | 99.46 | ||
| KOG3881|consensus | 412 | 99.46 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.46 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.43 | |
| KOG0322|consensus | 323 | 99.43 | ||
| KOG2041|consensus | 1189 | 99.42 | ||
| KOG1409|consensus | 404 | 99.4 | ||
| KOG2314|consensus | 698 | 99.39 | ||
| KOG0974|consensus | 967 | 99.39 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.38 | |
| KOG2394|consensus | 636 | 99.38 | ||
| KOG1334|consensus | 559 | 99.37 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.36 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.35 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.35 | |
| KOG0974|consensus | 967 | 99.33 | ||
| KOG1409|consensus | 404 | 99.32 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.32 | |
| KOG1064|consensus | 2439 | 99.31 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.3 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.29 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.28 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.24 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.24 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.23 | |
| KOG1354|consensus | 433 | 99.22 | ||
| KOG4190|consensus | 1034 | 99.21 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.19 | |
| KOG4547|consensus | 541 | 99.19 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.14 | |
| KOG1912|consensus | 1062 | 99.13 | ||
| KOG4547|consensus | 541 | 99.12 | ||
| KOG2041|consensus | 1189 | 99.12 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.1 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.1 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.07 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.07 | |
| KOG2315|consensus | 566 | 99.07 | ||
| KOG0280|consensus | 339 | 99.07 | ||
| KOG1912|consensus | 1062 | 99.07 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.05 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.05 | |
| KOG1064|consensus | 2439 | 99.05 | ||
| KOG4190|consensus | 1034 | 98.99 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.99 | |
| KOG2659|consensus | 228 | 98.95 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.94 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.94 | |
| KOG4532|consensus | 344 | 98.93 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.92 | |
| KOG3914|consensus | 390 | 98.9 | ||
| KOG0882|consensus | 558 | 98.89 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.87 | |
| KOG0309|consensus | 1081 | 98.85 | ||
| KOG0280|consensus | 339 | 98.82 | ||
| KOG2695|consensus | 425 | 98.8 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.8 | |
| KOG2314|consensus | 698 | 98.8 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.79 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.77 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.76 | |
| KOG3914|consensus | 390 | 98.76 | ||
| KOG1645|consensus | 463 | 98.76 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.73 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.71 | |
| KOG1832|consensus | 1516 | 98.65 | ||
| KOG4532|consensus | 344 | 98.63 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.63 | |
| KOG2695|consensus | 425 | 98.62 | ||
| KOG0309|consensus | 1081 | 98.61 | ||
| KOG0882|consensus | 558 | 98.57 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.56 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.55 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.53 | |
| KOG2114|consensus | 933 | 98.49 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.47 | |
| KOG4714|consensus | 319 | 98.46 | ||
| KOG4714|consensus | 319 | 98.44 | ||
| KOG1920|consensus | 1265 | 98.43 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.39 | |
| KOG3617|consensus | 1416 | 98.35 | ||
| KOG3621|consensus | 726 | 98.31 | ||
| KOG1920|consensus | 1265 | 98.3 | ||
| KOG2066|consensus | 846 | 98.29 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.21 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.2 | |
| KOG2066|consensus | 846 | 98.2 | ||
| KOG4649|consensus | 354 | 98.2 | ||
| KOG3617|consensus | 1416 | 98.17 | ||
| KOG2114|consensus | 933 | 98.16 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.16 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.15 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.15 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.14 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.14 | |
| PF08513 | 27 | LisH: LisH; InterPro: IPR013720 The LisH motif is | 98.12 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.11 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.07 | |
| KOG1275|consensus | 1118 | 98.06 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.06 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.05 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.05 | |
| KOG1275|consensus | 1118 | 98.01 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.98 | |
| smart00667 | 34 | LisH Lissencephaly type-1-like homology motif. Alp | 97.96 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.95 | |
| PF10607 | 145 | CLTH: CTLH/CRA C-terminal to LisH motif domain; In | 97.94 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.93 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.93 | |
| KOG1008|consensus | 783 | 97.93 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.85 | |
| KOG3621|consensus | 726 | 97.83 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.82 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.81 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.81 | |
| KOG0396|consensus | 389 | 97.81 | ||
| smart00668 | 58 | CTLH C-terminal to LisH motif. Alpha-helical motif | 97.8 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.79 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.78 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.77 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 97.76 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.76 | |
| KOG1897|consensus | 1096 | 97.76 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.75 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.75 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.7 | |
| KOG1008|consensus | 783 | 97.7 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.63 | |
| KOG4649|consensus | 354 | 97.62 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.6 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.56 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.54 | |
| KOG4640|consensus | 665 | 97.5 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.46 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.42 | |
| KOG4441|consensus | 571 | 97.41 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.34 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.33 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.27 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 97.24 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.24 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.23 | |
| KOG4441|consensus | 571 | 97.18 | ||
| KOG2444|consensus | 238 | 97.17 | ||
| PRK10115 | 686 | protease 2; Provisional | 97.14 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.12 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.1 | |
| KOG1645|consensus | 463 | 97.09 | ||
| KOG2395|consensus | 644 | 97.06 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.05 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.9 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.88 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 96.84 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 96.83 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 96.82 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.71 | |
| PRK10115 | 686 | protease 2; Provisional | 96.69 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 96.68 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.63 | |
| KOG2395|consensus | 644 | 96.54 | ||
| KOG2079|consensus | 1206 | 96.5 | ||
| KOG4640|consensus | 665 | 96.49 | ||
| KOG2079|consensus | 1206 | 96.44 | ||
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.42 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 96.36 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 96.28 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.24 | |
| KOG2444|consensus | 238 | 96.17 | ||
| KOG1897|consensus | 1096 | 96.16 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 96.14 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 96.08 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 96.07 | |
| KOG2377|consensus | 657 | 96.01 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.98 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 95.84 | |
| KOG2817|consensus | 394 | 95.77 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 95.64 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 95.58 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 95.57 | |
| PF06588 | 199 | Muskelin_N: Muskelin N-terminus; InterPro: IPR0105 | 95.51 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 95.5 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 95.43 | |
| KOG4499|consensus | 310 | 95.34 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 95.2 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.14 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 95.1 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 94.9 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 94.76 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 94.6 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 94.59 | |
| KOG4499|consensus | 310 | 94.45 | ||
| KOG3630|consensus | 1405 | 94.3 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 94.25 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 93.92 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 93.89 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 93.86 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 93.73 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 93.63 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 93.59 | |
| PF10433 | 504 | MMS1_N: Mono-functional DNA-alkylating methyl meth | 93.47 | |
| KOG2280|consensus | 829 | 93.43 | ||
| KOG1916|consensus | 1283 | 93.3 | ||
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 93.24 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 93.21 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 93.01 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 92.96 | |
| KOG3630|consensus | 1405 | 92.64 | ||
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 92.52 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 92.51 | |
| PLN02153 | 341 | epithiospecifier protein | 92.5 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 92.47 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 92.29 | |
| PLN02153 | 341 | epithiospecifier protein | 92.27 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 92.01 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 91.89 | |
| COG3292 | 671 | Predicted periplasmic ligand-binding sensor domain | 91.87 | |
| KOG4460|consensus | 741 | 91.83 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 91.34 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 91.32 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 91.1 | |
| PF10395 | 670 | Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an | 90.99 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 90.98 | |
| PLN02193 | 470 | nitrile-specifier protein | 90.94 | |
| KOG1983|consensus | 993 | 90.92 | ||
| KOG2377|consensus | 657 | 90.54 | ||
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 90.51 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 90.41 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 89.68 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 89.6 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 89.26 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 89.2 | |
| KOG2280|consensus | 829 | 89.17 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 88.85 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 88.79 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 88.72 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 88.6 | |
| KOG1916|consensus | 1283 | 88.41 | ||
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 88.23 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 88.16 | |
| KOG4460|consensus | 741 | 87.95 | ||
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 87.92 | |
| PLN02193 | 470 | nitrile-specifier protein | 87.9 | |
| PF05935 | 477 | Arylsulfotrans: Arylsulfotransferase (ASST); Inter | 87.62 | |
| KOG2247|consensus | 615 | 87.37 | ||
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 87.28 | |
| KOG1900|consensus | 1311 | 87.05 | ||
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 86.82 | |
| smart00667 | 34 | LisH Lissencephaly type-1-like homology motif. Alp | 86.75 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 86.5 | |
| KOG1900|consensus | 1311 | 85.47 | ||
| KOG1520|consensus | 376 | 85.18 | ||
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 84.6 | |
| PF09398 | 81 | FOP_dimer: FOP N terminal dimerisation domain; Int | 84.21 | |
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 83.73 | |
| KOG2247|consensus | 615 | 83.37 | ||
| smart00036 | 302 | CNH Domain found in NIK1-like kinases, mouse citro | 83.19 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 83.08 | |
| PF14269 | 299 | Arylsulfotran_2: Arylsulfotransferase (ASST) | 82.88 | |
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 82.66 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 81.77 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 81.66 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 81.43 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 81.07 |
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-83 Score=596.63 Aligned_cols=498 Identities=42% Similarity=0.734 Sum_probs=461.0
Q ss_pred CChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHH
Q psy10566 84 RTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILE 163 (604)
Q Consensus 84 ~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 163 (604)
+...|++||++|+|..+||..|+.+||.|+|+-+.+...+.|.+.|+.|+|+.++..+..+. +......+++.|++.+
T Consensus 15 ikk~efi~il~q~l~slgy~~S~~~lE~es~ll~~tat~klf~q~vlqg~w~q~v~~~~~i~--~~de~~~~ea~fLv~k 92 (519)
T KOG0293|consen 15 IKKGEFIRILWQILYSLGYDHSSPLLEWESGLLIPTATTKLFDQQVLQGQWDQQVMSLVRIS--FEDERNRKEAMFLVNK 92 (519)
T ss_pred eccchhhHhHHHHHHhcCccccchhhHHhhCcccccchHHHHHHHHHcccHHHHHHHHhhcc--CcchhhhHHHHHHHHH
Confidence 45779999999999999999999999999999999999999999999999999999888664 3345678899999999
Q ss_pred HHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhhccccchHHHhhhhccCCCChhhHHHHHHHhhhcCCCCccCC
Q psy10566 164 QKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLP 243 (604)
Q Consensus 164 ~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p 243 (604)
|+|||++..+....|+..||+...++..+.+++++|.+-|..++.....+... .......|.+++++|++|+||.+++|
T Consensus 93 Q~fLEf~k~~~is~al~~l~~~~~~lr~~~kk~~el~~sll~sn~~~~ne~~~-~~~~~n~R~~ll~elskyi~p~illP 171 (519)
T KOG0293|consen 93 QIFLEFLKTGSISHALPVLRNPVLYLRKNKKKFHELASSLLVSNDQFSNEENT-TAQLNNERDKLLDELSKYIPPNILLP 171 (519)
T ss_pred HHHHHHHhhccHhhhhHhhhcchhhhhhhHHHHHHHHHHHhccccccccccch-hhhhchhHHHHHHHHHhhCCHhhcCC
Confidence 99999999999999999999998889999999999998776544332222111 11123679999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHhcCCCCCCCcccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCC
Q psy10566 244 PRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDT 323 (604)
Q Consensus 244 ~~rl~~ll~q~~~~q~~~~~~~~~~~~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg 323 (604)
++||+.|++|++.+|+.+|+||+ .++..+++.||.|.+.++|.+..++|..|+++||.+.||++|+||||++.|.
T Consensus 172 ~rRLehLl~qAv~~Q~d~cvyhn-----sldsvsll~Dh~c~~~qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~ 246 (519)
T KOG0293|consen 172 KRRLEHLLEQAVKYQRDSCVYHN-----SLDSVSLLSDHFCGRLQIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDS 246 (519)
T ss_pred hHHHHHHHHHHHHHHHhHhHHhc-----ccchhhhhhhcccCcccCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCc
Confidence 99999999999999999999999 3466999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD 403 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 403 (604)
+..||++.... ..+..+++.+|..+|..+.||||+++|++|+.+. .+++||+.+|.+...+..++...+.+++|.||
T Consensus 247 Taiiw~v~~d~-~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e--~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pD 323 (519)
T KOG0293|consen 247 TAIIWIVVYDV-HFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE--VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPD 323 (519)
T ss_pred eEEEEEEecCc-ceeeeeeeecccCceEEEEECCCCCeEEecCchH--heeeccCCcchhhhhcccCcCCCcceeEEccC
Confidence 99999987544 3778899999999999999999999999999998 69999999999999998887889999999999
Q ss_pred CCEEEEEecCCeEEEEEcCCCeeeeeecee---EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEE
Q psy10566 404 GTKFVCGGIRGQFYQCDIEGQVLDSWEGVR---VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTI 480 (604)
Q Consensus 404 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~ 480 (604)
|..+++|+.|+.+..||++|+.+..|.+.+ |.+++.++||+++++.+.|..|++|+.++......+....+|+++++
T Consensus 324 g~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~i 403 (519)
T KOG0293|consen 324 GFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSI 403 (519)
T ss_pred CceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEE
Confidence 999999999999999999999999999875 99999999999999999999999999999888888889999999999
Q ss_pred CCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC
Q psy10566 481 DATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR 560 (604)
Q Consensus 481 s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~ 560 (604)
+.+++++++.-.+..+++||++....+++|.||+...+.|++||...+..++++||+|+.|+||+..+|+++.++.||..
T Consensus 404 S~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~ 483 (519)
T KOG0293|consen 404 SKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSK 483 (519)
T ss_pred cCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 561 TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 561 ~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.|++|+|+|.++.++||+|+||+||||.+...
T Consensus 484 ~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 484 TVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred eeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 99999999998999999999999999998765
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-63 Score=449.83 Aligned_cols=485 Identities=21% Similarity=0.331 Sum_probs=406.5
Q ss_pred CCChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCCh-hHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHH
Q psy10566 83 TRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHP-SAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLI 161 (604)
Q Consensus 83 ~~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~-~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~ 161 (604)
.+...+|+|||.|||+|+.+++++++||+|+++++|+. +++.|.+.|-+|+||.++..+..|+. ..+.+..+
T Consensus 4 eiessdVIrli~QflKE~~L~rtl~tLQeEt~VSLNTVDSvd~Fv~dI~sG~WD~VL~~vqsLKL-------P~kkL~dL 76 (508)
T KOG0275|consen 4 EIESSDVIRLIEQFLKENSLHRTLQTLQEETNVSLNTVDSVDGFVNDINSGHWDTVLKTVQSLKL-------PDKKLIDL 76 (508)
T ss_pred eeecchHHHHHHHHHhhhhHHHHHHHHHHhhccceeechhHHHHHHhcccCchHHHHHHHHhccC-------chhHHHHH
Confidence 34567999999999999999999999999999999994 79999999999999999999888763 23567799
Q ss_pred HHHHHHHHHhcCChhHHHHHHHhhcCCC----CCChhhhhhhhhhcccc--chHHHhhhhccCCCChhhHHHHHHHhhhc
Q psy10566 162 LEQKYLEYLEDGRVLDALHVLRNELTPL----NHNTAKVHELSSFMMCS--GVEQLLERAKWDGKGSQSRTKLMDKLQSF 235 (604)
Q Consensus 162 ~~~~~le~le~~~~~~Al~~l~~~l~p~----~~~~~~~~~L~~ll~~~--~~~~~~~~~~~~~~~~~~r~~l~~~l~~~ 235 (604)
|+|..||++|.+|...|..+||+. .|+ ...++|+.+|.++|..+ ++.+.+ ....++.|+..++ |..
T Consensus 77 YEqivlEliELREL~tAR~~lRQT-dpM~~lKQ~~peRy~~lE~ll~R~YFDp~EaY-----~dssKEkrRa~IA--Q~l 148 (508)
T KOG0275|consen 77 YEQIVLELIELRELGTARSLLRQT-DPMIMLKQIQPERYIRLENLLNRSYFDPREAY-----GDSSKEKRRAVIA--QAL 148 (508)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcc-CceehhhccChHHHHHHHHHhcccccChhhhc-----CcchHHHHHHHHH--HHh
Confidence 999999999999999999999996 565 57889999999998753 333332 2345566666555 666
Q ss_pred CCCCccCChhHHHHHHHHHHHHhHhcCCCCCCCcccccCccccccccCcCcCCCCccceeecc-cCCCcEEEEEEcCCCC
Q psy10566 236 LPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLN-DHCDEVWFCKFSPDGL 314 (604)
Q Consensus 236 ~~~~~~~p~~rl~~ll~q~~~~q~~~~~~~~~~~~~~~~~~~l~~d~~~~~~~~p~~~~~~l~-~H~~~V~~v~fspdg~ 314 (604)
....-.+||+||..|+.|+++||..+.+.++...-.-+......-+ ...+.+|....+.++ |.+..+-|..|||||+
T Consensus 149 s~EV~VVppSRLlaLlGQaLKWQqHQGLLPPGt~iDLFRGkAA~K~--~~Ee~~Pt~l~r~IKFg~KSh~EcA~FSPDgq 226 (508)
T KOG0275|consen 149 SGEVHVVPPSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKAAMKD--QEEERYPTQLARSIKFGQKSHVECARFSPDGQ 226 (508)
T ss_pred cCceEEcChHHHHHHHHHHhhhHhhcCCCCCCceeeeccchhhhhh--hHhhhchHHhhhheecccccchhheeeCCCCc
Confidence 6788889999999999999999999999877665222222111111 234667877776665 5667899999999999
Q ss_pred eEEEEECCCeEEEEEeCCCCc----eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTF----TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~----~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~ 390 (604)
||++||.||.|.|||..++.. +.+....+.-+..+|.|++||.|...+++|+.|| .|++|.+.+|.+++++...
T Consensus 227 yLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDG--kIKvWri~tG~ClRrFdrA 304 (508)
T KOG0275|consen 227 YLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDG--KIKVWRIETGQCLRRFDRA 304 (508)
T ss_pred eEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCC--cEEEEEEecchHHHHhhhh
Confidence 999999999999999873221 1222334456789999999999999999999999 8999999999999999999
Q ss_pred CCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc
Q psy10566 391 PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN 467 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~ 467 (604)
|...|+|+.|+.|+..+++++.|.++++.-+ .|+.++.+.+| -|+...|.++|..+++++.||+|++|+..+.++..
T Consensus 305 HtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~ 384 (508)
T KOG0275|consen 305 HTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLS 384 (508)
T ss_pred hccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhh
Confidence 9999999999999999999999999999999 69999999998 59999999999999999999999999999987766
Q ss_pred ccc---CCCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeecccc-ceEEEEeeeCCCCCcEEEEEeCCCcEE
Q psy10566 468 LLQ---EDHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQFTIHSCFGGANQDFVASGSEDGKVY 542 (604)
Q Consensus 468 ~~~---~~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~sgs~dg~I~ 542 (604)
.+. ...+|.++..-|. ...++++...++|++.++. |+.++.|..... +...+. +..+|.|.++++.++|+.++
T Consensus 385 Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~-~~lSpkGewiYcigED~vlY 462 (508)
T KOG0275|consen 385 TFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFIN-AILSPKGEWIYCIGEDGVLY 462 (508)
T ss_pred hccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEE-EEecCCCcEEEEEccCcEEE
Confidence 554 4567888777664 4788899999999999985 567888774433 333344 55579999999999999999
Q ss_pred EEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 543 IWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 543 iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
.|.+.+|++..++..|+..|..++.+|. .+++|+-+.||.+++|.+
T Consensus 463 CF~~~sG~LE~tl~VhEkdvIGl~HHPH-qNllAsYsEDgllKLWkp 508 (508)
T KOG0275|consen 463 CFSVLSGKLERTLPVHEKDVIGLTHHPH-QNLLASYSEDGLLKLWKP 508 (508)
T ss_pred EEEeecCceeeeeecccccccccccCcc-cchhhhhcccchhhhcCC
Confidence 9999999999999999999999999998 899999999999999974
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=345.37 Aligned_cols=294 Identities=21% Similarity=0.351 Sum_probs=263.4
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
-++|...+.||.++|.|++|+|+|..||||+.|.++++||+. +..+..+.++|...|.|++|+|||+.|++|+.+|
T Consensus 104 vtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~----TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg 179 (480)
T KOG0271|consen 104 VTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLD----TETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDG 179 (480)
T ss_pred cceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccC----CCCcceeecCCccEEEEEEECCCcchhhccccCC
Confidence 357778899999999999999999999999999999999998 6667899999999999999999999999999999
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEec-----CCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcC
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-----DGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRS 441 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~ 441 (604)
+|++||..+|+.+.....+|...|++++|.| ..+++++++.||.|+|||+. +..+....+| .|+|+.+--
T Consensus 180 --~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG 257 (480)
T KOG0271|consen 180 --SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG 257 (480)
T ss_pred --eEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcC
Confidence 8999999999998888889999999999987 66799999999999999995 6778888887 799999876
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEEC-----------CCC-------------------------
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTID-----------ATD------------------------- 484 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s-----------~~~------------------------- 484 (604)
+| ++++++.|++|++|+...+..... ..|.+.|+.++++ |.+
T Consensus 258 ~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~ 336 (480)
T KOG0271|consen 258 EG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSG 336 (480)
T ss_pred Cc-eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCc
Confidence 55 699999999999999988765554 4578889888876 223
Q ss_pred CEEEEEecCCeEEEEecCC-CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee
Q psy10566 485 RLALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS 563 (604)
Q Consensus 485 ~~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~ 563 (604)
..+++|+.|.++.+|+... .+++.++.+|...+ ..+.++||+++||++|.|..|++||.++|+.+.+|+||-+.|+
T Consensus 337 erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lV---n~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VY 413 (480)
T KOG0271|consen 337 ERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALV---NHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVY 413 (480)
T ss_pred ceeEEecCCceEEEecccccccchhhhhchhhhe---eeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeE
Confidence 3599999999999999765 45888899998854 4456689999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 564 CVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
.++|+.| .++|+|||.|.++++|++++.+-
T Consensus 414 qvawsaD-sRLlVS~SkDsTLKvw~V~tkKl 443 (480)
T KOG0271|consen 414 QVAWSAD-SRLLVSGSKDSTLKVWDVRTKKL 443 (480)
T ss_pred EEEeccC-ccEEEEcCCCceEEEEEeeeeee
Confidence 9999999 89999999999999999998763
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=335.76 Aligned_cols=284 Identities=22% Similarity=0.313 Sum_probs=260.0
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CCeEEEEeCCCceEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPEDCHEL 373 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~~~~i 373 (604)
.-.|-+.+|..+.||+|++.|||||.+|.++||+.. .+..+.+|.+|...|.++.|+|. +..+++|+.|| ++
T Consensus 170 SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~----~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dg--tv 243 (459)
T KOG0272|consen 170 SQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVP----QCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADG--TV 243 (459)
T ss_pred hhccCCCcceeeEeecCCCeEEEeecCCceeEeecC----CcceeEEEeccccceeeEEEccCCCccceeeeccCC--ce
Confidence 334677899999999999999999999999999998 67889999999999999999997 56899999999 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++|++++...+..+. +|...|..++|+|+|++|++++.|.+-++||++ +..+....|| .|.+++|.+||..+++|+
T Consensus 244 klw~~~~e~~l~~l~-gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGG 322 (459)
T KOG0272|consen 244 KLWKLSQETPLQDLE-GHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGG 322 (459)
T ss_pred eeeccCCCcchhhhh-cchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccC
Confidence 999999988888887 788999999999999999999999999999995 4555555666 799999999999999999
Q ss_pred CCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.|..-+|||++++.++.++. |..+|.+++|+|+|..+++|+.|++++|||++....+.++.+|..-+..+.. .+..|
T Consensus 323 lD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~--~p~~g 400 (459)
T KOG0272|consen 323 LDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKY--SPQEG 400 (459)
T ss_pred ccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEe--cccCC
Confidence 99999999999998766654 7899999999999999999999999999999999999999999997776643 22488
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
.+|+|+|.|++++||...++.++.++.||++.|.++.++|+ +..++|++.|.++++|..
T Consensus 401 ~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d-~~~i~t~s~DRT~KLW~~ 459 (459)
T KOG0272|consen 401 YFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPD-SQAIATSSFDRTIKLWRP 459 (459)
T ss_pred eEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccC-CceEEEeccCceeeeccC
Confidence 99999999999999999999999999999999999999999 899999999999999963
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=327.61 Aligned_cols=302 Identities=23% Similarity=0.364 Sum_probs=265.3
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+++=|....+||... ..+.++.++|...|.|++|+|||+.||+|+.||+|++||...+. .....+.+|...
T Consensus 132 tGsGD~TvR~WD~~T------eTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~---~~g~~l~gH~K~ 202 (480)
T KOG0271|consen 132 TGSGDTTVRLWDLDT------ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQ---QIGRALRGHKKW 202 (480)
T ss_pred ecCCCceEEeeccCC------CCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCC---cccccccCcccc
Confidence 344466788888543 34577899999999999999999999999999999999987322 345789999999
Q ss_pred eeEEEECC-----CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CC
Q psy10566 350 VAYLAWSP-----DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EG 423 (604)
Q Consensus 350 V~~l~~sp-----d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~ 423 (604)
|++++|.| ..++|++++.|| .|+|||+..+.++..+. +|..+|+|+.|--+ .++++|+.|++|++|+. +|
T Consensus 203 It~Lawep~hl~p~~r~las~skDg--~vrIWd~~~~~~~~~ls-gHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG 278 (480)
T KOG0271|consen 203 ITALAWEPLHLVPPCRRLASSSKDG--SVRIWDTKLGTCVRTLS-GHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDG 278 (480)
T ss_pred eeEEeecccccCCCccceecccCCC--CEEEEEccCceEEEEec-cCccceEEEEEcCC-ceEEecCCCceEEEEEccch
Confidence 99999976 577999999999 89999999999988887 89999999999754 48999999999999998 68
Q ss_pred Ceeeeeece--eEEEEEEc-----------CCCC-------------------------EEEEEeCCCeEEEEEcCCC--
Q psy10566 424 QVLDSWEGV--RVNCLWCR-----------SDGK-------------------------SVLAADTHHRIRTYNFEHL-- 463 (604)
Q Consensus 424 ~~~~~~~~~--~v~~l~~s-----------~~g~-------------------------~l~~~~~dg~I~i~d~~~~-- 463 (604)
...+.+.+| .|+.++++ |.++ .+++|+.|.++.+|+-...
T Consensus 279 ~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kk 358 (480)
T KOG0271|consen 279 KLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKK 358 (480)
T ss_pred hHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccccc
Confidence 888888876 57777665 3333 4999999999999997653
Q ss_pred cccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 464 TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 464 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
.......|..-|+.+.|+||++++++++-|..|++||.++|+.+.+|.||-..++.+ .++.|.++|++||.|.++++
T Consensus 359 pi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqv---awsaDsRLlVS~SkDsTLKv 435 (480)
T KOG0271|consen 359 PITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQV---AWSADSRLLVSGSKDSTLKV 435 (480)
T ss_pred chhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEE---EeccCccEEEEcCCCceEEE
Confidence 344567789999999999999999999999999999999999999999999987776 45689999999999999999
Q ss_pred EeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 544 WHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 544 wd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
||+++.++...+.||...|.++.|+|| +..+++|+.|..+++|.
T Consensus 436 w~V~tkKl~~DLpGh~DEVf~vDwspD-G~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 436 WDVRTKKLKQDLPGHADEVFAVDWSPD-GQRVASGGKDKVLRLWR 479 (480)
T ss_pred EEeeeeeecccCCCCCceEEEEEecCC-CceeecCCCceEEEeec
Confidence 999999999999999999999999999 89999999999999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=296.97 Aligned_cols=290 Identities=19% Similarity=0.268 Sum_probs=261.4
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
..+..++|+||.+.|.++.|++|+++|+++|.||.+.|||.- +....+.++-....|..++|+|.|+++++||-|+
T Consensus 44 ~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~----TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN 119 (343)
T KOG0286|consen 44 QMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSF----TTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN 119 (343)
T ss_pred eeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcc----cccceeEEecCceeEEEEEECCCCCeEEecCcCc
Confidence 345568999999999999999999999999999999999987 5555677777788999999999999999999999
Q ss_pred ceEEEEEECCCc--e---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcC
Q psy10566 370 CHELWVWNIETE--L---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRS 441 (604)
Q Consensus 370 ~~~i~vwd~~~~--~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~ 441 (604)
...||++.+. + .+.+...+|.+.+.++.|.+ ...|++++.|.+..+||+ .|+.+..|.+| .|.++.++|
T Consensus 120 --~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p 196 (343)
T KOG0286|consen 120 --KCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSP 196 (343)
T ss_pred --eeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCC
Confidence 7889998754 2 33444458999999999987 568999999999999999 58999999998 699999999
Q ss_pred -CCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEE
Q psy10566 442 -DGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 442 -~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
+++.+++|+.|+..++||++.+..... ..|...|+++.|.|+|.-+++|+.|++.++||++....+..|. +......
T Consensus 197 ~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys-~~~~~~g 275 (343)
T KOG0286|consen 197 SDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYS-HDSIICG 275 (343)
T ss_pred CCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeec-cCcccCC
Confidence 999999999999999999999866554 4589999999999999999999999999999999999888887 4555667
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+.++.|+..|++|++|..|.++.+||.-.++.+..+.||++.|+++..+|| +..++|||.|.++|||.
T Consensus 276 itSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~D-G~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 276 ITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPD-GMAVATGSWDSTLRIWA 343 (343)
T ss_pred ceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCC-CcEEEecchhHheeecC
Confidence 888888999999999999999999999999999999999999999999999 89999999999999994
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=314.81 Aligned_cols=300 Identities=25% Similarity=0.364 Sum_probs=249.3
Q ss_pred CCCCccceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEec------c----CCCCeeEEEE
Q psy10566 287 EEFPCETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLE------G----HTLGVAYLAW 355 (604)
Q Consensus 287 ~~~p~~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~------~----h~~~V~~l~~ 355 (604)
..+|....+.+. |+.+|.+++|+|-.. .+++|+.|-+.++|++......+.....++ + .+..|++++|
T Consensus 165 ~~I~~~~~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~W 243 (524)
T KOG0273|consen 165 VEIPSSKAKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDW 243 (524)
T ss_pred ccccccceeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEe
Confidence 457777778888 999999999999776 899999999999999973111222111111 1 2467999999
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeeceeE
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVRV 434 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~v 434 (604)
+.+|..|++|+.+| .+++|+... ..+..+. .|.++|.++.|+.+|++|++++.|+++.+||. .|.....+.-+..
T Consensus 244 n~~G~~LatG~~~G--~~riw~~~G-~l~~tl~-~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~ 319 (524)
T KOG0273|consen 244 NNDGTLLATGSEDG--EARIWNKDG-NLISTLG-QHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSA 319 (524)
T ss_pred cCCCCeEEEeecCc--EEEEEecCc-hhhhhhh-ccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccC
Confidence 99999999999999 899999754 4444444 68999999999999999999999999999998 5666666665532
Q ss_pred --EEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 435 --NCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 435 --~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
.++.|-.+ ..+++.+.|+.|+++.+....+. .+..|.++|.++.|+|.+.+|++++.|++++||..........+.
T Consensus 320 ~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~ 398 (524)
T KOG0273|consen 320 PALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQ 398 (524)
T ss_pred CccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhh
Confidence 44555544 34889999999999999876544 456689999999999999999999999999999999999999999
Q ss_pred ccccceEEEEeeeC------CCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 512 GVTQGQFTIHSCFG------GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 512 ~~~~~~~~i~~~~~------~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
.|...++.+.+... +..+..+++++.|++|++||+..+.++.+|..|..+|.+++|+|+ +.++|+|+.||.|.
T Consensus 399 ~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~-g~ylAsGs~dg~V~ 477 (524)
T KOG0273|consen 399 AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPN-GRYLASGSLDGCVH 477 (524)
T ss_pred hhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCC-CcEEEecCCCCeeE
Confidence 99987777654321 123568999999999999999999999999999999999999999 89999999999999
Q ss_pred EECCCCCC
Q psy10566 586 IWGPHLNT 593 (604)
Q Consensus 586 iW~~~~~~ 593 (604)
+|+.++++
T Consensus 478 iws~~~~~ 485 (524)
T KOG0273|consen 478 IWSTKTGK 485 (524)
T ss_pred eccccchh
Confidence 99999876
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=310.34 Aligned_cols=293 Identities=19% Similarity=0.333 Sum_probs=265.7
Q ss_pred CCCccceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 288 EFPCETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 288 ~~p~~~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
-.|.+.++++.||+..|+++.|.| .+.+|++|+.|+.|+||++-. ...+++++.+|..+|..++|+++|..++++|
T Consensus 201 ~~Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~---~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s 277 (503)
T KOG0282|consen 201 YLPKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD---DRRCLRTFKGHRKPVRDASFNNCGTSFLSAS 277 (503)
T ss_pred eccHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEec---CcceehhhhcchhhhhhhhccccCCeeeeee
Confidence 358889999999999999999999 889999999999999999972 5678999999999999999999999999999
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSD 442 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~ 442 (604)
.|+ .+++||+++|++...+. ....++|+.|+|++ +.|++|+.|+.|+.||+ .++.++.+..| .|..+.|-++
T Consensus 278 fD~--~lKlwDtETG~~~~~f~--~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~ 353 (503)
T KOG0282|consen 278 FDR--FLKLWDTETGQVLSRFH--LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDE 353 (503)
T ss_pred cce--eeeeeccccceEEEEEe--cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccC
Confidence 999 89999999999999987 44678999999988 89999999999999999 47777777766 7999999999
Q ss_pred CCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC---ceeeEeeccccce
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR---ILLRKFQGVTQGQ 517 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~---~~~~~~~~~~~~~ 517 (604)
|+++++.+.|+.+++|+.+.......+. ......++..+|++.++++-+.|+.|.+|.+... ...+.|.+|....
T Consensus 354 g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaG 433 (503)
T KOG0282|consen 354 GRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAG 433 (503)
T ss_pred CceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccC
Confidence 9999999999999999999876655544 3567789999999999999999999999987542 3456788999888
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+.+.+ .+||||.+|++|+.||.+.+||.++-+.+..+++|.+++..+.|+|.....+|||+.||.|++|+
T Consensus 434 ys~~v-~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 434 YSCQV-DFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ceeeE-EEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 88875 45799999999999999999999999999999999999999999999889999999999999996
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=276.25 Aligned_cols=290 Identities=17% Similarity=0.253 Sum_probs=250.7
Q ss_pred ceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCC-CceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPV-TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~-~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
...+|++|++.|+.++..+.+ ..+.+++.|.++.+|++... ...+...+.+.||...|..++.++||++.++++.|+
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~- 85 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG- 85 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc-
Confidence 446799999999999999974 58999999999999999743 334567899999999999999999999999999999
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece----eEEEEEEcCC--CC
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV----RVNCLWCRSD--GK 444 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~v~~l~~s~~--g~ 444 (604)
++++||+.+++..+.+. +|...|.+++|++|.+.+++|+.|.+|++|++-|.+..+.... -|.|+.|+|+ ..
T Consensus 86 -~lrlWDl~~g~~t~~f~-GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p 163 (315)
T KOG0279|consen 86 -TLRLWDLATGESTRRFV-GHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNP 163 (315)
T ss_pred -eEEEEEecCCcEEEEEE-ecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCc
Confidence 89999999998888887 8899999999999999999999999999999988777666544 4999999998 67
Q ss_pred EEEEEeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
.+++++.|++|++||+++.+... .+.|.+.++.++++|||..+++|+.||.+.+||++.++.+..+.... .|.++
T Consensus 164 ~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~----~v~sl 239 (315)
T KOG0279|consen 164 IIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFD----IVNSL 239 (315)
T ss_pred EEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCC----eEeeE
Confidence 89999999999999999977654 45688999999999999999999999999999999999977765433 57778
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC---------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH---------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h---------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+|+|+.-.|+.+ .+..|+|||+.++.++..+... .-...+++|+++ +..|++|-.|+.|++|.+..
T Consensus 240 ~fspnrywL~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~d-G~tLf~g~td~~irv~qv~~ 314 (315)
T KOG0279|consen 240 CFSPNRYWLCAA-TATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSAD-GQTLFAGYTDNVIRVWQVAK 314 (315)
T ss_pred EecCCceeEeec-cCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCC-CcEEEeeecCCcEEEEEeec
Confidence 888987666655 4556999999999888776422 223567899999 88999999999999998753
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=280.32 Aligned_cols=288 Identities=23% Similarity=0.399 Sum_probs=251.2
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
++..+.||++.|+.+.|+|+|.+||||+.|..|.+|++. +.++....+++|.+.|..+.|.+|++.++++|.|. +
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~---gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk--~ 113 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVY---GDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDK--T 113 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecc---ccccceeeeccccceeEeeeeccCCCEEEEecCCc--e
Confidence 345688999999999999999999999999999999976 35666788889999999999999999999999999 9
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeeeec-eeEEEEEEcCCCCEEEEE
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSWEG-VRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~v~~l~~s~~g~~l~~~ 449 (604)
++.||+++|+++.++. .|...|.++.-+.-|. .+.+++.|+++++||++ ...++.+.. .+++++.|..++..+++|
T Consensus 114 v~~wD~~tG~~~rk~k-~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sg 192 (338)
T KOG0265|consen 114 VRGWDAETGKRIRKHK-GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISG 192 (338)
T ss_pred EEEEecccceeeehhc-cccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeec
Confidence 9999999999999987 7888888888555454 56678889999999996 445555543 589999999999999999
Q ss_pred eCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC----CceeeEeeccccc--eEEEEe
Q psy10566 450 DTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD----RILLRKFQGVTQG--QFTIHS 522 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~----~~~~~~~~~~~~~--~~~i~~ 522 (604)
+-|+.|++||++.......+ +|..+|+.+..+++|.++++.+.|.++++||++- .+++..+.++... ...+ .
T Consensus 193 gIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL-~ 271 (338)
T KOG0265|consen 193 GIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLL-K 271 (338)
T ss_pred cccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcc-e
Confidence 99999999999887766554 5789999999999999999999999999999985 3457778776532 2233 3
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
|.|+|++.++.+|+.|..+++||..+...+..+.||.+.|+++.|+|. ..+|.+|+.|.+|.+=.
T Consensus 272 cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~-e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 272 CSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPT-EPIILSCSSDKTIYLGE 336 (338)
T ss_pred eeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCC-CcEEEEeccCceeEeec
Confidence 667899999999999999999999999999999999999999999999 89999999999998743
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=265.89 Aligned_cols=268 Identities=19% Similarity=0.318 Sum_probs=232.4
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE--EEEecCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL--RVKLNHSP 391 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~~~~ 391 (604)
-+|+|+|.|.+|++|... ++.+..+++.....|+.+...|+++.|++++... |++||++++.. +..+. +|
T Consensus 11 viLvsA~YDhTIRfWqa~----tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qh---vRlyD~~S~np~Pv~t~e-~h 82 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQAL----TGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQH---VRLYDLNSNNPNPVATFE-GH 82 (311)
T ss_pred eEEEeccCcceeeeeehh----cCeEEEEEecCccceeeEEEcCCcchhhhccCCe---eEEEEccCCCCCceeEEe-cc
Confidence 489999999999999998 7788899997788999999999999999998875 99999998764 55555 78
Q ss_pred CCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee-eeeec-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc
Q psy10566 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL-DSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~ 469 (604)
...|+++.|..+|+.+++|+.||+++|||++.... +.+.. .+|+++..+|+...|++++.+|.|++||+........+
T Consensus 83 ~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l 162 (311)
T KOG0315|consen 83 TKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL 162 (311)
T ss_pred CCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc
Confidence 88999999999999999999999999999965322 22322 48999999999999999999999999999887444332
Q ss_pred --cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC------ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE
Q psy10566 470 --QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR------ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541 (604)
Q Consensus 470 --~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I 541 (604)
....+|.++++.|+|.+++.+...|..++|++-+. +++.+|+.|... +..|.++|++++||++|.|.++
T Consensus 163 iPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~---il~C~lSPd~k~lat~ssdktv 239 (311)
T KOG0315|consen 163 IPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGH---ILRCLLSPDVKYLATCSSDKTV 239 (311)
T ss_pred CCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccce---EEEEEECCCCcEEEeecCCceE
Confidence 34678999999999999999999999999998764 456677777764 3345668999999999999999
Q ss_pred EEEeCCCC-cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 542 YIWHVKRE-LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 542 ~iwd~~~~-~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+||+.++. +....+.+|...+++.+||.+ +.+|+||+.|+.+++|++..++
T Consensus 240 ~iwn~~~~~kle~~l~gh~rWvWdc~FS~d-g~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 240 KIWNTDDFFKLELVLTGHQRWVWDCAFSAD-GEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred EEEecCCceeeEEEeecCCceEEeeeeccC-ccEEEecCCCCceeecccccCc
Confidence 99999987 667788999999999999999 8999999999999999999887
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=263.90 Aligned_cols=289 Identities=21% Similarity=0.342 Sum_probs=254.4
Q ss_pred CCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC
Q psy10566 288 EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 288 ~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~ 367 (604)
..|.+..++|..|.++|..+.|+-||+|.++++.|.+|++|+.. .+.+++++.+|...|..++.+.|+..+++||.
T Consensus 4 e~ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~----rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg 79 (307)
T KOG0316|consen 4 ELPTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPL----RGALIKTYSGHGHEVLDAALSSDNSKFASCGG 79 (307)
T ss_pred cCcchhceeecccccceEEEEEccCCCEEEEcCCCceEEeeccc----ccceeeeecCCCceeeeccccccccccccCCC
Confidence 46777889999999999999999999999999999999999987 77889999999999999999999999999999
Q ss_pred CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC---Ceeeeeece--eEEEEEEcCC
Q psy10566 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG---QVLDSWEGV--RVNCLWCRSD 442 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~--~v~~l~~s~~ 442 (604)
|. .+.+||+++|+..+++. +|...|+.+.|+.+...+++|+.|.++++||.+. ++++.+... .|.++.+.
T Consensus 80 Dk--~v~vwDV~TGkv~Rr~r-gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~-- 154 (307)
T KOG0316|consen 80 DK--AVQVWDVNTGKVDRRFR-GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA-- 154 (307)
T ss_pred Cc--eEEEEEcccCeeeeecc-cccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--
Confidence 98 89999999999999998 8899999999999999999999999999999954 455555443 45555544
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
+..+++|+.||+++.||++.+....- ....||++++|+++++..++++.|+++++.|-.+|+.+..+++|....+.+.+
T Consensus 155 ~heIvaGS~DGtvRtydiR~G~l~sD-y~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc 233 (307)
T KOG0316|consen 155 EHEIVAGSVDGTVRTYDIRKGTLSSD-YFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDC 233 (307)
T ss_pred ccEEEeeccCCcEEEEEeecceeehh-hcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeee
Confidence 66799999999999999998764332 23689999999999999999999999999999999999999999999999988
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC-eeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT-VSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~-V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
++. .....+++||+||.|++||+..+..+..+..|... |.+++++|. ..-|+++. ++.+..|.-
T Consensus 234 ~l~-qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~-~~~f~~A~-~~~~~~~~~ 298 (307)
T KOG0316|consen 234 CLN-QSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPT-MDDFITAT-GHGDLFWYQ 298 (307)
T ss_pred eec-ccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccC-ccceeEec-CCceeceee
Confidence 775 66779999999999999999999999999988877 899999998 55555655 345666643
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=302.03 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=225.7
Q ss_pred CCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC---------------------------ceeEe
Q psy10566 287 EEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT---------------------------FTCQH 339 (604)
Q Consensus 287 ~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~---------------------------~~~~~ 339 (604)
...|.-+..++.--...++|+.|++|+.+||.|-.|..|++|.+.+.. .....
T Consensus 364 ~~lpSic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~ 443 (707)
T KOG0263|consen 364 NSLPSICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGT 443 (707)
T ss_pred CCCCcEEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCce
Confidence 445666666666556789999999999999999999999999987311 01123
Q ss_pred eEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 340 ~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
..++.||.++|..+.|+|+.++|++|+.|. ++++|.+.+..+...+. +|..+|+.+.|+|.|-+|++++.|++.++|
T Consensus 444 ~~~L~GH~GPVyg~sFsPd~rfLlScSED~--svRLWsl~t~s~~V~y~-GH~~PVwdV~F~P~GyYFatas~D~tArLW 520 (707)
T KOG0263|consen 444 SRTLYGHSGPVYGCSFSPDRRFLLSCSEDS--SVRLWSLDTWSCLVIYK-GHLAPVWDVQFAPRGYYFATASHDQTARLW 520 (707)
T ss_pred eEEeecCCCceeeeeecccccceeeccCCc--ceeeeecccceeEEEec-CCCcceeeEEecCCceEEEecCCCceeeee
Confidence 456889999999999999999999999998 89999999999998887 899999999999999999999888888777
Q ss_pred EcCC-CeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 420 DIEG-QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 420 d~~~-~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
..+. ..+ .....|-..+.|+.|+|+..++++|+.|.+|++
T Consensus 521 s~d~~~Pl---------------------------------------RifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRl 561 (707)
T KOG0263|consen 521 STDHNKPL---------------------------------------RIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRL 561 (707)
T ss_pred ecccCCch---------------------------------------hhhcccccccceEEECCcccccccCCCCceEEE
Confidence 6531 222 223345678999999999999999999999999
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
||+.+|..++.|.||... |.++.++|+|++|++|++||.|.+||+.+++++..+.+|++.|.++.|+.+ +.+||+|
T Consensus 562 WDv~~G~~VRiF~GH~~~---V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~d-g~vLasg 637 (707)
T KOG0263|consen 562 WDVSTGNSVRIFTGHKGP---VTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRD-GNVLASG 637 (707)
T ss_pred EEcCCCcEEEEecCCCCc---eEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecC-CCEEEec
Confidence 999999999999999985 555666899999999999999999999999999999999999999999999 8999999
Q ss_pred eCCCcEEEECCCCCC
Q psy10566 579 SDDCTVRIWGPHLNT 593 (604)
Q Consensus 579 s~Dg~I~iW~~~~~~ 593 (604)
|.|.+|++||+....
T Consensus 638 g~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 638 GADNSVRLWDLTKVI 652 (707)
T ss_pred CCCCeEEEEEchhhc
Confidence 999999999987644
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=281.64 Aligned_cols=288 Identities=17% Similarity=0.295 Sum_probs=259.6
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
...+.+.+|..+|+.+-|.|+-..+++++.|++|++||.. +++....++||.+.|..|+|+..|+++++++.|-
T Consensus 99 ~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~----tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl-- 172 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTE----TGELERSLRGHTDSVFDISFDASGKYLATCSSDL-- 172 (406)
T ss_pred CchhhhhccccceeeeeeccCceEEEEecCCceEEEEEcc----chhhhhhhhccccceeEEEEecCccEEEecCCcc--
Confidence 4456788999999999999999999999999999999998 5666899999999999999999999999999997
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeecee--EEEEEEcCCCCEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVR--VNCLWCRSDGKSVLA 448 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~--v~~l~~s~~g~~l~~ 448 (604)
.+++||.++-....+...+|...|.+++|-|.|.++++++.|.+|+.|++ .|-.++.+.+|+ |..+..+.||..+++
T Consensus 173 ~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As 252 (406)
T KOG0295|consen 173 SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIAS 252 (406)
T ss_pred chhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEe
Confidence 69999998743233333478888999999999999999999999999999 588999999984 899999999999999
Q ss_pred EeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCC---------------CCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDAT---------------DRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~---------------~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
++.|.++++|-+.++.+...+ .|..+|.+++|.|. +.++.+++.|++|++||+.++.++.++.+
T Consensus 253 ~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g 332 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG 332 (406)
T ss_pred cCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec
Confidence 999999999999998665544 57899999999772 35899999999999999999999999999
Q ss_pred cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|.. .++.+.++|.|+||+++.+|+++++||++++++..++..|..-|+++.|+.+ ..+++||+-|.++++|..
T Consensus 333 hdn---wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~-~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 333 HDN---WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWEC 405 (406)
T ss_pred ccc---eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCC-CceEEeccccceeeeeec
Confidence 998 4555677899999999999999999999999999999999999999999998 789999999999999974
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=292.05 Aligned_cols=260 Identities=18% Similarity=0.281 Sum_probs=233.4
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~ 347 (604)
+++|.....+|.... ...+++|.||++.|.++.|+|. +..+|||+.||+|++|+++ .-.++..+.+|.
T Consensus 192 T~swsG~~kvW~~~~------~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~----~e~~l~~l~gH~ 261 (459)
T KOG0272|consen 192 TGSWSGLVKVWSVPQ------CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLS----QETPLQDLEGHL 261 (459)
T ss_pred EeecCCceeEeecCC------cceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccC----CCcchhhhhcch
Confidence 456666666665432 3678899999999999999997 5689999999999999998 446789999999
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCee
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVL 426 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~ 426 (604)
..|..++|+|+|++|++++.|. +-++||+.++....... +|...|.+++|.|||..+++|+.|..-++||+ +|..+
T Consensus 262 ~RVs~VafHPsG~~L~TasfD~--tWRlWD~~tk~ElL~QE-GHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~i 338 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTASFDS--TWRLWDLETKSELLLQE-GHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCI 338 (459)
T ss_pred hhheeeeecCCCceeeeccccc--chhhcccccchhhHhhc-ccccccceeEecCCCceeeccCccchhheeecccCcEE
Confidence 9999999999999999999998 89999999998766555 89999999999999999999999999999999 68999
Q ss_pred eeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECC-CCCEEEEEecCCeEEEEecC
Q psy10566 427 DSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 427 ~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~ 502 (604)
..+.+| .|.++.|+|+|..+++|+.|++++|||++.......+ .|..-|+.+.|+| .|.+|++++.|+++++|..+
T Consensus 339 m~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~ 418 (459)
T KOG0272|consen 339 MFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR 418 (459)
T ss_pred EEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCC
Confidence 999988 7999999999999999999999999999987765554 4788999999998 78899999999999999999
Q ss_pred CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
+..+++.+.||...+. ++..++++.++++++.|.++++|.
T Consensus 419 ~~~~~ksLaGHe~kV~---s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 419 TWSPLKSLAGHEGKVI---SLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CcccchhhcCCccceE---EEEeccCCceEEEeccCceeeecc
Confidence 9999999999999654 456679999999999999999995
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=306.23 Aligned_cols=291 Identities=29% Similarity=0.468 Sum_probs=258.6
Q ss_pred eeecccC-CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 294 TQVLNDH-CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 294 ~~~l~~H-~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
...+.+| ...|.++.|+++|+++++++.|+.+++|+.... .......+.+|...|..++|+|+++++++++.|+ +
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~--~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~--t 226 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGI--KSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDK--T 226 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccc--cchhhccccccccceeeeEECCCCcEEEEecCCc--e
Confidence 6666665 789999999999999999999999999999622 1135667789999999999999999999999998 8
Q ss_pred EEEEEC-CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEE
Q psy10566 373 LWVWNI-ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLA 448 (604)
Q Consensus 373 i~vwd~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~ 448 (604)
+++||+ ..+..+..+. +|...|++++|+|+++.+++|+.|++|++||++ ++....+.+| .|++++|+++++.+++
T Consensus 227 iriwd~~~~~~~~~~l~-gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s 305 (456)
T KOG0266|consen 227 LRIWDLKDDGRNLKTLK-GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVS 305 (456)
T ss_pred EEEeeccCCCeEEEEec-CCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEE
Confidence 999999 4456667766 899999999999999999999999999999996 6888888887 7999999999999999
Q ss_pred EeCCCeEEEEEcCCCcc--c-ccccCCC--CeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 449 ADTHHRIRTYNFEHLTD--S-NLLQEDH--PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~--~-~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
++.|+.|++||+.++.. . ....+.. +++++.|+|++.++++++.|+.+++||+..+..+..+.+|.....++...
T Consensus 306 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~ 385 (456)
T KOG0266|consen 306 ASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSP 385 (456)
T ss_pred cCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecc
Confidence 99999999999999883 2 3333332 68999999999999999999999999999999999999998875566555
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEe--CCCcEEEECCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-TRTVSCVAWNPVYHQMIASVS--DDCTVRIWGPH 590 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s--~Dg~I~iW~~~ 590 (604)
...+.+.++++|+.|+.|++||..++..+..+.+| ...+..++|+|. ..++++++ .|+.+++|..+
T Consensus 386 ~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~-~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 386 TLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPT-ENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCC-cCeeeecCcCCCceEEEecCC
Confidence 66789999999999999999999999999999999 899999999999 89999998 79999999875
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=271.06 Aligned_cols=298 Identities=18% Similarity=0.279 Sum_probs=260.3
Q ss_pred CCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC
Q psy10566 288 EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 288 ~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~ 367 (604)
-.|.+..+++.||.+.|.|+++.|..++|+||+.|++|+|||+. +++...++.||...|..+++|+-..|+++++.
T Consensus 138 HapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDla----tg~LkltltGhi~~vr~vavS~rHpYlFs~ge 213 (460)
T KOG0285|consen 138 HAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLA----TGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE 213 (460)
T ss_pred cCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcc----cCeEEEeecchhheeeeeeecccCceEEEecC
Confidence 45778889999999999999999999999999999999999999 77888999999999999999999999999999
Q ss_pred CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCC
Q psy10566 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGK 444 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~ 444 (604)
|+ .|+.||++..+.++.+. +|-+.|.|++.+|.-..+++|+.|.++++||++ ...+..+.+| +|..+.+.|-..
T Consensus 214 dk--~VKCwDLe~nkvIR~Yh-GHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dp 290 (460)
T KOG0285|consen 214 DK--QVKCWDLEYNKVIRHYH-GHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDP 290 (460)
T ss_pred CC--eeEEEechhhhhHHHhc-cccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCC
Confidence 99 89999999999888776 888999999999999999999999999999995 5567778887 699999999888
Q ss_pred EEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
.+++++.|++|++||++.++.... ..|...+.+++.+|....+++++.|+ |+-|++..+..+..+.+|..-+.. +
T Consensus 291 qvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~~iint---l 366 (460)
T KOG0285|consen 291 QVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSGHNAIINT---L 366 (460)
T ss_pred ceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhccccccceeee---e
Confidence 999999999999999998766554 45788999999999999999988876 999999999999999888874443 3
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee-----C---CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLS-----G---HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~-----~---h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
.. ....++++|+++|.+.+||.++|-..+.+. | .+..|.+.+|... +..|+||..|.+|++|.-+.....
T Consensus 367 ~~-nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDkt-g~rlit~eadKtIk~~keDe~aT~ 444 (460)
T KOG0285|consen 367 SV-NSDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKT-GSRLITGEADKTIKMYKEDEHATE 444 (460)
T ss_pred ee-ccCceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeeccc-CceEEeccCCcceEEEecccccCc
Confidence 33 345589999999999999999987655542 1 2457899999998 889999999999999987765544
Q ss_pred Ccc
Q psy10566 596 SPH 598 (604)
Q Consensus 596 ~~~ 598 (604)
..|
T Consensus 445 Eth 447 (460)
T KOG0285|consen 445 ETH 447 (460)
T ss_pred ccC
Confidence 333
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=254.44 Aligned_cols=285 Identities=20% Similarity=0.351 Sum_probs=230.7
Q ss_pred cceeecccCCCcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
-.++.+++|++.|+.++|+|- |..|||||.|+.|+||+... ..+..+...+ .+|+..|.+++|+|.|++|++++.|.
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~-~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSS-GDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCC-CCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 346789999999999999998 88999999999999999873 2234444444 36999999999999999999999998
Q ss_pred ceEEEEEECCCc--eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-C---Ceeeeeece--eEEEEEEcC
Q psy10566 370 CHELWVWNIETE--LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-G---QVLDSWEGV--RVNCLWCRS 441 (604)
Q Consensus 370 ~~~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~---~~~~~~~~~--~v~~l~~s~ 441 (604)
++.+|.-..+ +++..+. +|...|.+++|+++|++||+++.|..|-+|.++ + .+...+..| .|..+.|+|
T Consensus 84 --t~~Iw~k~~~efecv~~lE-GHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP 160 (312)
T KOG0645|consen 84 --TVVIWKKEDGEFECVATLE-GHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP 160 (312)
T ss_pred --eEEEeecCCCceeEEeeee-ccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC
Confidence 8999987765 4555555 899999999999999999999999999999985 2 344555555 699999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCc----ccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-ccccc
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLT----DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-GVTQG 516 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~-~~~~~ 516 (604)
....|++++.|.+|++|+..... ...+-.+...|.+++|++.|..|++++.|++++||-..+. +. .|...
T Consensus 161 t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----~~~~~sr~ 235 (312)
T KOG0645|consen 161 TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----LSGMHSRA 235 (312)
T ss_pred CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC-----cchhcccc
Confidence 99999999999999999987422 2233446679999999999999999999999999986532 11 23343
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC------cceE-EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE------LPIA-TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~------~~~~-~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
.+.+. +. ...|++++.|+.|++|..... +.+. .-..|...|++|.|+|...++|++|++||.|++|.+
T Consensus 236 ~Y~v~---W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l 310 (312)
T KOG0645|consen 236 LYDVP---WD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWEL 310 (312)
T ss_pred eEeee---ec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEe
Confidence 44443 32 458999999999999987642 1111 234688899999999966899999999999999986
Q ss_pred C
Q psy10566 590 H 590 (604)
Q Consensus 590 ~ 590 (604)
.
T Consensus 311 ~ 311 (312)
T KOG0645|consen 311 E 311 (312)
T ss_pred c
Confidence 4
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=280.63 Aligned_cols=284 Identities=17% Similarity=0.321 Sum_probs=246.5
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd 377 (604)
..-+..|..+.|.|+|+.|++|+..|.+.+|+.. .+.....+..|..+|.++.|++++.+++++..++ .|++|+
T Consensus 93 NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~----~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG--~iKyWq 166 (464)
T KOG0284|consen 93 NKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGT----SFNFETILQAHDSPVRTMKWSHNGTWMISGDKGG--MIKYWQ 166 (464)
T ss_pred cccccceeeEEEcCCCceeEeecccccEEEecCc----eeeHHHHhhhhcccceeEEEccCCCEEEEcCCCc--eEEecc
Confidence 3345689999999999999999999999999986 5666667888999999999999999999999888 899999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCe
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHR 454 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~ 454 (604)
..-... ..+...|...|.+++|+|+...|++++.||+|+|||. ..+....+.+| .|.++.|+|....+++++.|..
T Consensus 167 pnmnnV-k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnl 245 (464)
T KOG0284|consen 167 PNMNNV-KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNL 245 (464)
T ss_pred cchhhh-HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCce
Confidence 865443 3333356688999999999999999999999999998 34544555665 7999999999999999999999
Q ss_pred EEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEE
Q psy10566 455 IRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVA 533 (604)
Q Consensus 455 I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 533 (604)
|++||.+++.+...+ .|+..|..+.|++++++|++++.|..+++||+++.+.+..+.+|...+..+. +.+-...++.
T Consensus 246 VKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~--WhP~~~~lft 323 (464)
T KOG0284|consen 246 VKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLT--WHPLNESLFT 323 (464)
T ss_pred eEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeec--ccccccccee
Confidence 999999998776554 5799999999999999999999999999999999999999999998766653 3345678999
Q ss_pred EEeCCCcEEEEeCCCCcceEEe-eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 534 SGSEDGKVYIWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 534 sgs~dg~I~iwd~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+|+.||.|..|.+...+++..+ .+|.+.|++++|+|- +.+|++|+.|.++++|.-..
T Consensus 324 sgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPl-Ghil~tgsnd~t~rfw~r~r 381 (464)
T KOG0284|consen 324 SGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPL-GHILATGSNDRTVRFWTRNR 381 (464)
T ss_pred eccCCCceEEEeccccccccCCCcccccceeeeecccc-ceeEeecCCCcceeeeccCC
Confidence 9999999999999966666665 479999999999999 89999999999999997643
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=277.60 Aligned_cols=284 Identities=30% Similarity=0.454 Sum_probs=248.3
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
++++.+|.++|++++|+|++++|++++.||.|++|++. .......+..|...+..+.|+|+++.+++++.++ .|
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~i 75 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLE----TGELLRTLKGHTGPVRDVAASADGTYLASGSSDK--TI 75 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEee----CCCcEEEEecCCcceeEEEECCCCCEEEEEcCCC--eE
Confidence 35678999999999999999999999999999999998 3345677788999999999999999999999988 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++||+.+++....+. .+...+.++.|++++..+++++.+|.+.+||+. ++....+..+ .+.++.++|++..+++++
T Consensus 76 ~i~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 154 (289)
T cd00200 76 RLWDLETGECVRTLT-GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS 154 (289)
T ss_pred EEEEcCcccceEEEe-ccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc
Confidence 999999877666665 566789999999998888888889999999996 6666666655 599999999999888888
Q ss_pred CCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.++.|++||++..+....+ .+...+.++.++|+++.+++++.++.|++||+++++.+..+..+... +..+.+++++
T Consensus 155 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~---i~~~~~~~~~ 231 (289)
T cd00200 155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG---VNSVAFSPDG 231 (289)
T ss_pred CCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCc---eEEEEEcCCC
Confidence 8999999999876554444 45668999999999999999999999999999998888888777663 4445556888
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.++++++.||.|++||+.+++++..+.+|...|.+++|+|+ +.+|++++.||.|++|+
T Consensus 232 ~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 232 YLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPD-GKRLASGSADGTIRIWD 289 (289)
T ss_pred cEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCC-CCEEEEecCCCeEEecC
Confidence 89999888999999999999999999999999999999998 78999999999999996
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=256.05 Aligned_cols=268 Identities=15% Similarity=0.202 Sum_probs=226.4
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCe
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V 350 (604)
.+.|.....|+.... +.--...++.|+||...|..++.++||++.+++|.|+++++||+. .++..+.|.+|...|
T Consensus 34 asrDk~ii~W~L~~d-d~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~----~g~~t~~f~GH~~dV 108 (315)
T KOG0279|consen 34 ASRDKTIIVWKLTSD-DIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLA----TGESTRRFVGHTKDV 108 (315)
T ss_pred cccceEEEEEEeccC-ccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEec----CCcEEEEEEecCCce
Confidence 344667777776555 333456788999999999999999999999999999999999998 557788999999999
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-eee
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ-VLD 427 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~~~ 427 (604)
.+++|+||++.+++++.|. +|++|++............+.+.|.|+.|+|+ ..+|++++.|++|++||+++. ...
T Consensus 109 lsva~s~dn~qivSGSrDk--Tiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~ 186 (315)
T KOG0279|consen 109 LSVAFSTDNRQIVSGSRDK--TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRT 186 (315)
T ss_pred EEEEecCCCceeecCCCcc--eeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhh
Confidence 9999999999999999999 89999998766555554444889999999997 789999999999999999754 445
Q ss_pred eeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 428 SWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 428 ~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
.+.+| .++.++++|||..+++|+.||.+.+||++.++....+.+...|.+++|+|+...|+.+.. ..|+|||+.++.
T Consensus 187 ~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~-~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 187 TFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATA-TSIKIWDLESKA 265 (315)
T ss_pred ccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccC-CceEEEeccchh
Confidence 56565 699999999999999999999999999999999999999999999999999776666654 459999999998
Q ss_pred eeeEeeccc-------cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 506 LLRKFQGVT-------QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 506 ~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++..+.... ....++ +++++++|..|++|-.|+.|++|.+.
T Consensus 266 ~v~~l~~d~~g~s~~~~~~~cl-slaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 266 VVEELKLDGIGPSSKAGDPICL-SLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred hhhhccccccccccccCCcEEE-EEEEcCCCcEEEeeecCCcEEEEEee
Confidence 877665221 123344 45677999999999999999999875
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=270.32 Aligned_cols=295 Identities=22% Similarity=0.367 Sum_probs=218.3
Q ss_pred CCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec---cCCCCeeEEEECCCCCeEE
Q psy10566 287 EEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE---GHTLGVAYLAWSPDSSHLL 363 (604)
Q Consensus 287 ~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~spd~~~l~ 363 (604)
+.-|++...++..|..-|.|+.|+|||.++||++.||+|.|||=. +++.+..+. +|.+.|.+++|+||+..++
T Consensus 176 eGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGk----tge~vg~l~~~~aHkGsIfalsWsPDs~~~~ 251 (603)
T KOG0318|consen 176 EGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGK----TGEKVGELEDSDAHKGSIFALSWSPDSTQFL 251 (603)
T ss_pred eCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCC----CccEEEEecCCCCccccEEEEEECCCCceEE
Confidence 345788888999999999999999999999999999999999977 666677777 8999999999999999999
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCC--CCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEE
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPE--DSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLW 438 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~ 438 (604)
+++.|. ++++||+.+.+++.++..+.. +.-..+.|. ...|++.+.+|.|.+++. +...++.+.+| .|+++.
T Consensus 252 T~SaDk--t~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLt 327 (603)
T KOG0318|consen 252 TVSADK--TIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALT 327 (603)
T ss_pred EecCCc--eEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcEEEEecccCCChhheecccccceeEEE
Confidence 999999 899999999988877764332 222233332 334555555555555554 23344444444 355555
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCcccc---------------------------------------------------
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSN--------------------------------------------------- 467 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~~--------------------------------------------------- 467 (604)
.+++++++++++.||.|.-||..++....
T Consensus 328 v~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~Q 407 (603)
T KOG0318|consen 328 VSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQ 407 (603)
T ss_pred EcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCC
Confidence 55555555555555555555442211000
Q ss_pred -------------------------------cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee--eEeeccc
Q psy10566 468 -------------------------------LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL--RKFQGVT 514 (604)
Q Consensus 468 -------------------------------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~--~~~~~~~ 514 (604)
.........+++++|++..+++|+.|+.|++|.+...... .....|.
T Consensus 408 P~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~ 487 (603)
T KOG0318|consen 408 PKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHR 487 (603)
T ss_pred ceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeeccc
Confidence 0001224567889999999999999999999999876533 3445566
Q ss_pred cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE-EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA-TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~-~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.. +..+.++|++.|||+|...+.|.+||+.+.+... ...-|...|++++|+|+ ..++||||-|..|.||+++...
T Consensus 488 a~---iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~-n~~vATGSlDt~Viiysv~kP~ 563 (603)
T KOG0318|consen 488 AA---ITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPN-NKLVATGSLDTNVIIYSVKKPA 563 (603)
T ss_pred CC---ceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCC-ceEEEeccccceEEEEEccChh
Confidence 64 4556678999999999999999999999877633 33449999999999999 8999999999999999998764
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=245.49 Aligned_cols=282 Identities=15% Similarity=0.283 Sum_probs=239.7
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCe
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V 350 (604)
.+.|-...+|... .+.|.+++....+.|..+...||+++||+++. -.|++||+. +....++.++.+|+..|
T Consensus 16 A~YDhTIRfWqa~------tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~--S~np~Pv~t~e~h~kNV 86 (311)
T KOG0315|consen 16 AGYDHTIRFWQAL------TGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLN--SNNPNPVATFEGHTKNV 86 (311)
T ss_pred ccCcceeeeeehh------cCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEcc--CCCCCceeEEeccCCce
Confidence 4445566666544 46788899888889999999999999999874 579999999 44555789999999999
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-eeeee
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ-VLDSW 429 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~ 429 (604)
+++.|..+|+.++++|.|| +++|||++...+.+.+. +..+|+++..+|+...|++|..+|.|++||+... .....
T Consensus 87 taVgF~~dgrWMyTgseDg--t~kIWdlR~~~~qR~~~--~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l 162 (311)
T KOG0315|consen 87 TAVGFQCDGRWMYTGSEDG--TVKIWDLRSLSCQRNYQ--HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL 162 (311)
T ss_pred EEEEEeecCeEEEecCCCc--eEEEEeccCcccchhcc--CCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc
Confidence 9999999999999999999 89999999977666665 6689999999999999999999999999999533 33322
Q ss_pred ---eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-------ccccCCCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 430 ---EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-------NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 430 ---~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
....+.++.+.|||.+++++...|..++|++-..... .+..|...+..+.+||++++|++++.|.+++||
T Consensus 163 iPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iw 242 (311)
T KOG0315|consen 163 IPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIW 242 (311)
T ss_pred CCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEE
Confidence 2347999999999999999999999999998764322 233467889999999999999999999999999
Q ss_pred ecCCC-ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc
Q psy10566 500 DLRDR-ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 500 d~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s 568 (604)
+..+. +....+.+|.. .+.-|.|+.+|.||++|+.|+.+++|++..++.+....+|.....|++.+
T Consensus 243 n~~~~~kle~~l~gh~r---WvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 243 NTDDFFKLELVLTGHQR---WVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred ecCCceeeEEEeecCCc---eEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 99987 55666777775 45557778999999999999999999999999999999999888888765
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=269.05 Aligned_cols=478 Identities=15% Similarity=0.224 Sum_probs=317.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCccccccccccccCccccccCCCCCccCCCCCccCCCcc-CCCCCCCcCcccCCC
Q psy10566 6 EDIVRLIGQYLRTIGLDGDSDDGAPPPLKKSRASVQASGQEDMQANGSGPSNHLNGNTHNGVPE-INGEVPAPAVKTMTR 84 (604)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (604)
-|.||++=|-|.++|++.+.. .+-.++|.. -+++.+ .-+...+..|.|. ..-.+.- ..-....
T Consensus 18 ~efi~il~q~l~slgy~~S~~-----------~lE~es~ll--~~tat~--klf~q~vlqg~w~q~v~~~~~-i~~~de~ 81 (519)
T KOG0293|consen 18 GEFIRILWQILYSLGYDHSSP-----------LLEWESGLL--IPTATT--KLFDQQVLQGQWDQQVMSLVR-ISFEDER 81 (519)
T ss_pred chhhHhHHHHHHhcCccccch-----------hhHHhhCcc--cccchH--HHHHHHHHcccHHHHHHHHhh-ccCcchh
Confidence 378999999999999999977 554566764 233322 2566777788773 1111000 0011244
Q ss_pred ChHHHHHHHH-----HHHhhcChHHHHHHHHHHhC-CccCChhHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhH
Q psy10566 85 TDEDIVRLIG-----QYLRTIGLDRTADLLMQESG-CKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMK 158 (604)
Q Consensus 85 ~~~e~~~lI~-----q~L~e~g~~~s~~~L~~Es~-~~~~~~~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~ 158 (604)
++.|..+|+. +||+.+.-..|..+|+.|.- +..+...+++|-..++..+=. .. ........
T Consensus 82 ~~~ea~fLv~kQ~fLEf~k~~~is~al~~l~~~~~~lr~~~kk~~el~~sll~sn~~------------~~-ne~~~~~~ 148 (519)
T KOG0293|consen 82 NRKEAMFLVNKQIFLEFLKTGSISHALPVLRNPVLYLRKNKKKFHELASSLLVSNDQ------------FS-NEENTTAQ 148 (519)
T ss_pred hhHHHHHHHHHHHHHHHHhhccHhhhhHhhhcchhhhhhhHHHHHHHHHHHhccccc------------cc-cccchhhh
Confidence 5677766654 48888888888888888754 555655666665554442100 00 00000111
Q ss_pred HHHHHHHHHHHHhcCChhHHHHHHHhhcCCCCCCh-hhhhhh-hhhccccchHHHhhhhccCCCChhhHHHHHHHhhhcC
Q psy10566 159 FLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNT-AKVHEL-SSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFL 236 (604)
Q Consensus 159 ~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~~~~-~~~~~L-~~ll~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~ 236 (604)
+...+.+.|+- |.+.|.|-..-+ .|+..| ...++......++. + ...+ +..++.+.
T Consensus 149 ~~n~R~~ll~e------------lskyi~p~illP~rRLehLl~qAv~~Q~d~cvyh-----n-slds----vsll~Dh~ 206 (519)
T KOG0293|consen 149 LNNERDKLLDE------------LSKYIPPNILLPKRRLEHLLEQAVKYQRDSCVYH-----N-SLDS----VSLLSDHF 206 (519)
T ss_pred hchhHHHHHHH------------HHhhCCHhhcCChHHHHHHHHHHHHHHHhHhHHh-----c-ccch----hhhhhhcc
Confidence 11222222222 223333321111 122211 11111111111111 1 1111 44567888
Q ss_pred CCCccCChhHHHHHHHHHHHHhHhcCCCCCCCc---ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCC
Q psy10566 237 PPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKV---DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDG 313 (604)
Q Consensus 237 ~~~~~~p~~rl~~ll~q~~~~q~~~~~~~~~~~---~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg 313 (604)
+....+|....+.+..+.- +++.+.|.+... +++.|.+..+|+...... .+..+++.||..+|..+.||||.
T Consensus 207 c~~~qip~qt~qil~~htd--EVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDd 281 (519)
T KOG0293|consen 207 CGRLQIPSQTWQILQDHTD--EVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDD 281 (519)
T ss_pred cCcccCCchhhhhHhhCCC--cEEEEEEcCCCeeEeeccCCceEEEEEEecCcc---eeeeeeeecccCceEEEEECCCC
Confidence 8888888876666655544 345666654443 566677888888665444 78899999999999999999999
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
++|++|+.|..+++||+. ++.....+. +|...+.+++|.|||..+++|+.|+ ++..||++... .........
T Consensus 282 ryLlaCg~~e~~~lwDv~----tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr--~i~~wdlDgn~-~~~W~gvr~ 354 (519)
T KOG0293|consen 282 RYLLACGFDEVLSLWDVD----TGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDR--TIIMWDLDGNI-LGNWEGVRD 354 (519)
T ss_pred CeEEecCchHheeeccCC----cchhhhhcccCcCCCcceeEEccCCceeEecCCCC--cEEEecCCcch-hhccccccc
Confidence 999999999999999998 444444333 2468899999999999999999998 89999997654 223332333
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee-e-eeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD-S-WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL- 469 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~-~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~- 469 (604)
..|.+++..+||+++++.+.|..|++++.+...-. . -..++++++.++.+++++++.-.+..+++||++.......+
T Consensus 355 ~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~ 434 (519)
T KOG0293|consen 355 PKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYF 434 (519)
T ss_pred ceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhh
Confidence 56999999999999999999999999998644333 2 23458999999999999999999999999999965544333
Q ss_pred cC--CCCeeEEEE-CCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 470 QE--DHPVMSFTI-DATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 470 ~~--~~~i~~~~~-s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
++ ..-+..-+| -.+..++++|+.|+.|+||+..+++++..+.||...+.++ .+.+.+..++|+||+||+|+||-.
T Consensus 435 Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcV--swNP~~p~m~ASasDDgtIRIWg~ 512 (519)
T KOG0293|consen 435 GHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCV--SWNPADPEMFASASDDGTIRIWGP 512 (519)
T ss_pred cccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEE--ecCCCCHHHhhccCCCCeEEEecC
Confidence 33 222333344 3466899999999999999999999999999999855554 334456689999999999999987
Q ss_pred CC
Q psy10566 547 KR 548 (604)
Q Consensus 547 ~~ 548 (604)
..
T Consensus 513 ~~ 514 (519)
T KOG0293|consen 513 SD 514 (519)
T ss_pred Cc
Confidence 53
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=265.61 Aligned_cols=482 Identities=17% Similarity=0.285 Sum_probs=322.8
Q ss_pred CCCChHHHHHHHHHHHhhcChHHHHHHHHHHhCCcc---C--ChhHHHHHHHHHcC-ChHHHHHHHhhhhhhc-------
Q psy10566 82 MTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKL---D--HPSAAKFRQHIMDG-DWSKADHDLNDLEYLL------- 148 (604)
Q Consensus 82 ~~~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~---~--~~~~~~l~~~i~~g-~w~~~~~~l~~l~~~~------- 148 (604)
|+.+++||.+||.+||+|.||.-||.+|+.|++++- + ......|.+.+..| .+-+++..+..-....
T Consensus 1 msitsdEvN~LV~RYLqE~G~~hsaftf~~Et~is~~n~~~~~vp~gaLi~ivQKGLqY~E~E~~~~~~~~v~d~~~e~~ 80 (524)
T KOG0273|consen 1 MSITSDEVNFLVWRYLQESGFSHSAFTFGIETGISQSNINGSLVPPGALISIVQKGLQYVEAEKHLNESGVVFDAPIESL 80 (524)
T ss_pred CcccHHHHHHHHHHHHHHcCcceeeEEeeecccccccCCCccccChHHHHHHHHhhhhhhheeeeeccCCcccccccccc
Confidence 577899999999999999999999999999999653 2 23356677777777 4555544333211100
Q ss_pred CCccchhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhhccccchHHHhhhhccCCCChhhHHHH
Q psy10566 149 DSRGDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKL 228 (604)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~~~~r~~l 228 (604)
...+....-.+.+.+|+|-|-+..++.-.++..++..-.- ....+.-. +...+...-.+.. ....+.+..-
T Consensus 81 ~~~d~v~~~~~ql~~~~~~e~~s~~~~~~~~~~~~~~~~~-s~s~~ag~-----~~~~d~a~~~er~---~n~eed~a~~ 151 (524)
T KOG0273|consen 81 SLEDLVMEDVVQLRQQAFREKLSEEQFCAQLKIAQDKESG-STSTPAGS-----ISQRDGAKTGERT---SNGEEDKAMS 151 (524)
T ss_pred chhhhccccccccchhhhhhhccccchhhhhhhhhhhccC-CcCCCCCc-----cccccchhhcchh---cccccCcccc
Confidence 0011112233456688888888766655444444331000 00000000 0000000000000 0000000000
Q ss_pred HHH---hhhcCCCCccCChhHHHHHHHHHHHHhHhcCCCCCCCc----ccccCccccccccCc----CcCCCCccceeec
Q psy10566 229 MDK---LQSFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTKV----DESLENVSLLVDHLC----TKEEFPCETTQVL 297 (604)
Q Consensus 229 ~~~---l~~~~~~~~~~p~~rl~~ll~q~~~~q~~~~~~~~~~~----~~~~~~~~l~~d~~~----~~~~~p~~~~~~l 297 (604)
++- +- -+...+-+|++.. .+++ -+.++..|-+.+... ..+.+....+|.... ...+.-.+....+
T Consensus 152 I~~~~e~~-~i~~~~~I~~~~~-kvl~--~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~ 227 (524)
T KOG0273|consen 152 IDVHTEPM-EIDGGVEIPSSKA-KVLR--HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIRE 227 (524)
T ss_pred ccccccce-eecccccccccce-eecc--CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhh
Confidence 000 00 0001122443311 1111 011112222221111 111122222332221 0010000100111
Q ss_pred cc----CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 298 ND----HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 298 ~~----H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
-+ -...|++++|+.+|.+||+|+.||.++||+.. +..+.++..|.++|.++.|+.+|.||++++-|+ ++
T Consensus 228 ~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-----G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~--tt 300 (524)
T KOG0273|consen 228 GGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKD-----GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDG--TT 300 (524)
T ss_pred hcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecC-----chhhhhhhccCCceEEEEEcCCCCEEEeccCCc--cE
Confidence 11 23589999999999999999999999999985 556788899999999999999999999999999 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
.+||..++.....+. .|..+...+.|-. ...|++++.|+.|+++.+. ..++.++.+| .|.++.|.|.|..|++++
T Consensus 301 ilwd~~~g~~~q~f~-~~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~S 378 (524)
T KOG0273|consen 301 ILWDAHTGTVKQQFE-FHSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCS 378 (524)
T ss_pred EEEeccCceEEEeee-eccCCccceEEec-CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEec
Confidence 999999999888877 4555557788874 4679999999999999995 5677778777 799999999999999999
Q ss_pred CCCeEEEEEcCCCccc-ccccCCCCeeEEEECCCC---------CEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 451 THHRIRTYNFEHLTDS-NLLQEDHPVMSFTIDATD---------RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~~s~~~---------~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
.|+++++|+....... .+..|...|..+.|+|+| ..+++++.|++|++||+..+.++.+|..|..+++.+
T Consensus 379 dD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysv 458 (524)
T KOG0273|consen 379 DDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSV 458 (524)
T ss_pred CCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEE
Confidence 9999999997665444 455688899999999965 568999999999999999999999999999976665
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.++|+|+++|+|+.||.|.||++++++.++.+.+. +.|..++|+.+ +..|..+-.||.+++-|++
T Consensus 459 ---afS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~-G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 459 ---AFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGT-GGIFELCWNAA-GDKLGACASDGSVCVLDLR 523 (524)
T ss_pred ---EecCCCcEEEecCCCCeeEeccccchheeEeecCC-CeEEEEEEcCC-CCEEEEEecCCCceEEEec
Confidence 55799999999999999999999999999998754 55999999999 6888888889999998864
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=253.27 Aligned_cols=352 Identities=19% Similarity=0.289 Sum_probs=269.8
Q ss_pred hcCCCCccCChhHHHHHHHHHHHHhHhcCCCCCCC--------cccccCccccccccCcCcCCCCccceeecccCCCcEE
Q psy10566 234 SFLPPTVMLPPRRLQTLLSQAVDLQKYHCPYHNTK--------VDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVW 305 (604)
Q Consensus 234 ~~~~~~~~~p~~rl~~ll~q~~~~q~~~~~~~~~~--------~~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~ 305 (604)
...+..+..|++||..|+...++............ ...++| ...-.+........+.-....+..|++++.
T Consensus 38 ~~~~~~~~~PserLl~lv~~gmq~~~d~~~~~~~~S~~~~t~p~~~giD-le~dadaq~~s~e~~~yEt~ylt~HK~~cR 116 (430)
T KOG0640|consen 38 TMTPANICAPSERLLHLVAKGMQAENDGDLRAVSSSVLLITTPVTAGID-LEFDADAQGSSPEPSEYETKYLTSHKSPCR 116 (430)
T ss_pred hcCcCCCCCCHHHHHHHHHHHhhcccCcceecccccccceeccCcCcee-eeeccccccCCCCCcccceEEEeeccccee
Confidence 34567888999999999998887643322221111 111110 000011222223344455677889999999
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCC--------------CCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDP--------------VTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~--------------~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+.+|||||.++||||.|..|+|.|++. .......++++..|..+|+++.|+|....|++++.|+
T Consensus 117 ~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~-- 194 (430)
T KOG0640|consen 117 AAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDN-- 194 (430)
T ss_pred eeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCC--
Confidence 999999999999999999999999871 0112246788999999999999999999999999999
Q ss_pred EEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeee---c--eeEEEEEEcCCCC
Q psy10566 372 ELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWE---G--VRVNCLWCRSDGK 444 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~---~--~~v~~l~~s~~g~ 444 (604)
+|++||.........+. .....+|.++.|+|.|.++++|....++++||++. ++...-. + ..|+++.+++.|+
T Consensus 195 tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~ 274 (430)
T KOG0640|consen 195 TVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGS 274 (430)
T ss_pred eEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCcc
Confidence 89999987654322221 12446799999999999999999999999999953 3332221 1 2699999999999
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc---ceE
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ---GQF 518 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~---~~~ 518 (604)
..++++.||.|++||--+.++...+.. +..|.+..|..+++++++.+.|..+++|.+.+++.+..+.|... ...
T Consensus 275 lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~ 354 (430)
T KOG0640|consen 275 LYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKH 354 (430)
T ss_pred EEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhh
Confidence 999999999999999988887777653 67899999999999999999999999999999999999987522 122
Q ss_pred EEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcceEEe-eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 519 TIHSCFGGANQDFVASGSE-DGKVYIWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
....+| .....|++.-.+ .+.+.-||.+++..+..+ -+|++.+..+..+|. ...++|||+|..+|+|--+
T Consensus 355 rtqAvF-NhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~-~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 355 RTQAVF-NHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPV-EPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhhhhh-cCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCC-CCceeeecccceeeeeeec
Confidence 223334 456677776655 578999999998776655 379999999999999 7899999999999999654
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=257.48 Aligned_cols=286 Identities=20% Similarity=0.317 Sum_probs=239.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
..+.+|..|++.|.+++.+|+.+++|||+.|....||++. ++.....+.+|...|+++.|+.+|.+|++|+.+|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~----~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG-- 128 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDIS----TGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSG-- 128 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEcc----CCcceeEecCCCCceEEEEEccCceEEEecCCCc--
Confidence 3467899999999999999999999999999999999998 5557889999999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeeece--eEEEEEEcCCCCEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWEGV--RVNCLWCRSDGKSVLA 448 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~--~v~~l~~s~~g~~l~~ 448 (604)
.|.+|+..++.....+. ..-..+.=+.|+|.+..|+.|+.||.+..|.+.. ...+.+.+| ++++-.|.|+|+.+++
T Consensus 129 ~v~v~~~stg~~~~~~~-~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~t 207 (399)
T KOG0296|consen 129 KVLVFKVSTGGEQWKLD-QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILT 207 (399)
T ss_pred cEEEEEcccCceEEEee-cccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEE
Confidence 89999999998887775 2345678899999999999999999999999954 777778777 7889999999999999
Q ss_pred EeCCCeEEEEEcCCCcccccccC----------------------------------------------------CC---
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQE----------------------------------------------------DH--- 473 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~----------------------------------------------------~~--- 473 (604)
+..||+|++||..++.....+.. ..
T Consensus 208 gy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~e 287 (399)
T KOG0296|consen 208 GYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDE 287 (399)
T ss_pred EecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhh
Confidence 99999999999987644332220 00
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~ 553 (604)
.|.++.++..-.+.++|+-||+|.|||+...++.+.+. |...+..+ .|. + ..+|++++.||.|+.||.++|+++.
T Consensus 288 sve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l--~w~-~-t~~l~t~c~~g~v~~wDaRtG~l~~ 362 (399)
T KOG0296|consen 288 SVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKL--KWL-N-TDYLLTACANGKVRQWDARTGQLKF 362 (399)
T ss_pred hhhhcccccccchhhcccccceEEEEecccchhheecc-CCCceEEE--EEc-C-cchheeeccCceEEeeeccccceEE
Confidence 01112222334567888999999999998876665554 44443333 333 3 6799999999999999999999999
Q ss_pred EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 554 TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 554 ~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
++.||...|.+++++|+ .++++|+|+|++.+|+++.
T Consensus 363 ~y~GH~~~Il~f~ls~~-~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 363 TYTGHQMGILDFALSPQ-KRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEecCchheeEEEEcCC-CcEEEEecCCCeEEEEecC
Confidence 99999999999999999 8999999999999999874
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=253.84 Aligned_cols=286 Identities=22% Similarity=0.334 Sum_probs=254.5
Q ss_pred eecccCCCcEEEEEEcC---CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 295 QVLNDHCDEVWFCKFSP---DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fsp---dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.+..||+.+|..++||| +|-+|++++.|+.-.+-+-+ ++.-+.++.+|.+.|.+.+...+...-++++.|-
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~----tgdwigtfeghkgavw~~~l~~na~~aasaaadf-- 81 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGD----TGDWIGTFEGHKGAVWSATLNKNATRAASAAADF-- 81 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCC----CCCcEEeeeccCcceeeeecCchhhhhhhhcccc--
Confidence 45689999999999986 88899999999998888866 6677899999999999999999988888888887
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
+.++||.-+|..+..+. |...|.+++|+.|.++|++|+.+..+++||++ ......+.+| .|..+.|....+.++
T Consensus 82 takvw~a~tgdelhsf~--hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iL 159 (334)
T KOG0278|consen 82 TAKVWDAVTGDELHSFE--HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCIL 159 (334)
T ss_pred hhhhhhhhhhhhhhhhh--hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEE
Confidence 89999999999998887 66679999999999999999999999999995 3556666676 588888888888999
Q ss_pred EEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+++.|++|++||.+++.....+....+|+++.++++|+++.++ ..+.|.+||..+..+++.+.... .|.+...+|
T Consensus 160 SSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~----nV~SASL~P 234 (334)
T KOG0278|consen 160 SSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPC----NVESASLHP 234 (334)
T ss_pred eeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCcc----ccccccccC
Confidence 9999999999999999999999999999999999999977665 45679999999998888877544 455666679
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceEEe-eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+..++++|++|+.++.||..+|+.+..+ ++|.++|.||.|+|+ +.+.|+||.||+|++|.+..+..
T Consensus 235 ~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPd-GE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 235 KKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPD-GELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred CCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCC-CceeeccCCCceEEEEEecCCCc
Confidence 9999999999999999999999999886 899999999999999 89999999999999999887664
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=271.81 Aligned_cols=298 Identities=21% Similarity=0.310 Sum_probs=244.8
Q ss_pred CCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC
Q psy10566 288 EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 288 ~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~ 367 (604)
--|+...+++.||-+.|.++.|+.|.++|++||.|.+++||.++. .+.-....+.+|.+.|.++-|..+...+++.+.
T Consensus 132 ~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~--~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvsk 209 (893)
T KOG0291|consen 132 FNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDG--NKNLFTYALNGHKDYVVACFFGANSLDLYTVSK 209 (893)
T ss_pred cCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEecc--ccccceEeccCCCcceEEEEeccCcceEEEEec
Confidence 446778889999999999999999999999999999999999983 233457788999999999999999999999999
Q ss_pred CCceEEEEEECCC-----------------------ceE---------E-EEecCCCCCCeEEEEEecCCCEEEEEecCC
Q psy10566 368 EDCHELWVWNIET-----------------------ELL---------R-VKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 368 d~~~~i~vwd~~~-----------------------~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
|| .+.+|.... ++. . ..+.......|++++|++..+.+++|-..|
T Consensus 210 dG--~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG 287 (893)
T KOG0291|consen 210 DG--ALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSG 287 (893)
T ss_pred Cc--eEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCC
Confidence 99 788887651 110 0 011111224577777777777777776666
Q ss_pred eEEEEEcCC--------------------------------------------Ceeeeeece--eEEEEEEcCCCCEEEE
Q psy10566 415 QFYQCDIEG--------------------------------------------QVLDSWEGV--RVNCLWCRSDGKSVLA 448 (604)
Q Consensus 415 ~i~iwd~~~--------------------------------------------~~~~~~~~~--~v~~l~~s~~g~~l~~ 448 (604)
.+.+|++.+ ..+....+| ++++++++|||..+++
T Consensus 288 ~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaT 367 (893)
T KOG0291|consen 288 EFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIAT 367 (893)
T ss_pred eeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEe
Confidence 666665421 111122233 6999999999999999
Q ss_pred EeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 449 ADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
|+.||+|++||...+-+.. ...|...++.+.|+..++.+++++-||+|+.||+...+..++|...... ...+++..|
T Consensus 368 G~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~--QfscvavD~ 445 (893)
T KOG0291|consen 368 GAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI--QFSCVAVDP 445 (893)
T ss_pred ccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCce--eeeEEEEcC
Confidence 9999999999999876554 4558999999999999999999999999999999999999999876654 445566678
Q ss_pred CCcEEEEEeCCC-cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 528 NQDFVASGSEDG-KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 528 ~~~~l~sgs~dg-~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.|.++++|+.|. .|++|++++|+.+..+.||+++|.+++|+|. +..|||+|.|.+||+|++-..
T Consensus 446 sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~-~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 446 SGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPD-GSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccc-cCeEEeccccceEEEEEeecc
Confidence 899999999885 6999999999999999999999999999999 889999999999999999665
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=246.48 Aligned_cols=263 Identities=20% Similarity=0.285 Sum_probs=232.7
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC--CceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV--TFTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~--~~~~~~~~~l~~h~ 347 (604)
+.+.|...++||... ...++.+.-....|..++|+|.|+++|+|+-|+...||++... .+.....+.+.+|+
T Consensus 72 SaSqDGklIvWDs~T------tnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHt 145 (343)
T KOG0286|consen 72 SASQDGKLIVWDSFT------TNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHT 145 (343)
T ss_pred eeccCCeEEEEEccc------ccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCcc
Confidence 445566677787544 4455666667789999999999999999999999999999844 44456677899999
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEc-CCCe
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDI-EGQV 425 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~-~~~~ 425 (604)
+-+.|+.|-+| ..|++++.|. +..+||+++++....+. +|.+.|.+++++| +++.|++|+-|+..++||+ ++..
T Consensus 146 gylScC~f~dD-~~ilT~SGD~--TCalWDie~g~~~~~f~-GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c 221 (343)
T KOG0286|consen 146 GYLSCCRFLDD-NHILTGSGDM--TCALWDIETGQQTQVFH-GHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQC 221 (343)
T ss_pred ceeEEEEEcCC-CceEecCCCc--eEEEEEcccceEEEEec-CCcccEEEEecCCCCCCeEEecccccceeeeeccCcce
Confidence 99999999885 5788999998 89999999999998887 8999999999999 9999999999999999999 5889
Q ss_pred eeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEe
Q psy10566 426 LDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 426 ~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd 500 (604)
.+.|.+| .|+++.|.|+|.-+++|+.|++.++||++.......+.+ ..+|++++|+..|++|++|..|.++.+||
T Consensus 222 ~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWD 301 (343)
T KOG0286|consen 222 VQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWD 301 (343)
T ss_pred eEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEee
Confidence 9999998 699999999999999999999999999999877777665 46899999999999999999999999999
Q ss_pred cCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 501 LRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
.-.++.+..+.+|.+.+.++ ..+|||.-+++||.|..++||.
T Consensus 302 tlk~e~vg~L~GHeNRvScl---~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 302 TLKGERVGVLAGHENRVSCL---GVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccccceEEEeeccCCeeEEE---EECCCCcEEEecchhHheeecC
Confidence 99999999999999965554 4579999999999999999994
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=299.24 Aligned_cols=284 Identities=17% Similarity=0.299 Sum_probs=231.1
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce----eEeeEEeccCCCCeeEEEECCC-CCeEEEEeCCCce
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT----CQHRKTLEGHTLGVAYLAWSPD-SSHLLVVGPEDCH 371 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~----~~~~~~l~~h~~~V~~l~~spd-~~~l~s~~~d~~~ 371 (604)
+..|.+.|++++|+|+|++||+|+.|++|+||+....... ......+. +...|.+++|+|. +.+|++++.|+
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg-- 555 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEG-- 555 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCC--
Confidence 4569999999999999999999999999999997521000 11223333 3467999999874 77899999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeeeece-eEEEEEEc-CCCCEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV-RVNCLWCR-SDGKSVL 447 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s-~~g~~l~ 447 (604)
+|++||+.+++.+..+. +|...|++++|+| ++.+|++|+.||.|++||+. +..+..+..+ .+.++.|+ ++|..++
T Consensus 556 ~v~lWd~~~~~~~~~~~-~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~la 634 (793)
T PLN00181 556 VVQVWDVARSQLVTEMK-EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLA 634 (793)
T ss_pred eEEEEECCCCeEEEEec-CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEE
Confidence 89999999998877775 6889999999997 78999999999999999995 5666665543 68888884 5799999
Q ss_pred EEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC------ceeeEeeccccceEE
Q psy10566 448 AADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR------ILLRKFQGVTQGQFT 519 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~------~~~~~~~~~~~~~~~ 519 (604)
+|+.|+.|++||++.... .....|...|.++.|. ++.++++++.|++|++||++.+ .++..+.+|.....
T Consensus 635 tgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~- 712 (793)
T PLN00181 635 FGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKN- 712 (793)
T ss_pred EEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCee-
Confidence 999999999999987542 3345678899999997 7889999999999999999743 56778888876443
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe-------------eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL-------------SGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l-------------~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
++.+++++.+|++|+.||.|++|+.....++..+ ..|...|.+++|+|+ +..|++|+.||.|+|
T Consensus 713 --~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~-~~~lva~~~dG~I~i 789 (793)
T PLN00181 713 --FVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQ-SSTLVAANSTGNIKI 789 (793)
T ss_pred --EEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCC-CCeEEEecCCCcEEE
Confidence 3455788999999999999999998766544322 234567999999999 789999999999999
Q ss_pred ECC
Q psy10566 587 WGP 589 (604)
Q Consensus 587 W~~ 589 (604)
|++
T Consensus 790 ~~~ 792 (793)
T PLN00181 790 LEM 792 (793)
T ss_pred Eec
Confidence 986
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=264.47 Aligned_cols=299 Identities=21% Similarity=0.351 Sum_probs=260.3
Q ss_pred cCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCe
Q psy10566 282 HLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH 361 (604)
Q Consensus 282 ~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~ 361 (604)
..|..+..|......+..|.+.|..+.|-++...|++|+.|..|++|++. ..+...+.++.|..++|+++.|.+++++
T Consensus 156 d~~v~~~lpS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~--~~k~~~~~tLaGs~g~it~~d~d~~~~~ 233 (459)
T KOG0288|consen 156 DHFVEDTLPSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVL--GEKSELISTLAGSLGNITSIDFDSDNKH 233 (459)
T ss_pred chhhhcccchhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcc--cchhhhhhhhhccCCCcceeeecCCCce
Confidence 44667889999999999999999999999998999999999999999998 3346678899999999999999999999
Q ss_pred EEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeee-eceeEEEEEE
Q psy10566 362 LLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSW-EGVRVNCLWC 439 (604)
Q Consensus 362 l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~-~~~~v~~l~~ 439 (604)
+++++.|+ .+++|++...+...++. +|.+.|+++.|......+++|+.|.+|+.||+. ..+.++. .+..+.++.+
T Consensus 234 ~iAas~d~--~~r~Wnvd~~r~~~TLs-GHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~ 310 (459)
T KOG0288|consen 234 VIAASNDK--NLRLWNVDSLRLRHTLS-GHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVC 310 (459)
T ss_pred EEeecCCC--ceeeeeccchhhhhhhc-ccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEe
Confidence 99999999 89999999999888887 699999999999888889999999999999994 4444433 3445666666
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc-eE
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG-QF 518 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~-~~ 518 (604)
+ +..+++|..|++|++||.++..........+.|+++..++++..+++++.|.++.++|+++.+....|...... ..
T Consensus 311 ~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~as 388 (459)
T KOG0288|consen 311 S--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS 388 (459)
T ss_pred c--ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccccc
Confidence 6 66789999999999999999998888888889999999999999999999999999999999988888743211 11
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC--CeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR--TVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~--~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
....+.++|++.|+++||.||.|+||++.++++...+..... .|++++|+|. +..+++++.++.+.+|.
T Consensus 389 DwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~s-G~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 389 DWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPS-GSGLLSADKQKAVTLWT 459 (459)
T ss_pred ccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCC-CchhhcccCCcceEecC
Confidence 133345679999999999999999999999999998876544 5999999999 88899999999999994
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=267.25 Aligned_cols=291 Identities=14% Similarity=0.271 Sum_probs=249.9
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.+++.|.--...|..++|+..|.+||.|+. -|.+-||+.. ....+...++|...+++++++|||+++++|+.|+
T Consensus 297 f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWq----sEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDg 372 (893)
T KOG0291|consen 297 FNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQ----SESYVLKQQGHSDRITSLAYSPDGQLIATGAEDG 372 (893)
T ss_pred ceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEee----ccceeeeccccccceeeEEECCCCcEEEeccCCC
Confidence 4677888877889999999999999999875 4799999998 5556778889999999999999999999999999
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece---eEEEEEEcCCCCE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV---RVNCLWCRSDGKS 445 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~---~v~~l~~s~~g~~ 445 (604)
+|++||..+|-|..++. .|...|+.+.|+..|+.+++++-||+|+.||+ +.+..+++... ...|++..|.|..
T Consensus 373 --KVKvWn~~SgfC~vTFt-eHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGel 449 (893)
T KOG0291|consen 373 --KVKVWNTQSGFCFVTFT-EHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGEL 449 (893)
T ss_pred --cEEEEeccCceEEEEec-cCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCE
Confidence 89999999999999998 78899999999999999999999999999999 57777777664 6789999999999
Q ss_pred EEEEeCCCe-EEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEe
Q psy10566 446 VLAADTHHR-IRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 446 l~~~~~dg~-I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~ 522 (604)
+.+|+.|.. |.+|++.+++...++ +|.+||.+++|+|.+..|++++-|.+|++||+-.. ..+.++.. .. .+..
T Consensus 450 V~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i-~s---dvl~ 525 (893)
T KOG0291|consen 450 VCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEI-RS---DVLA 525 (893)
T ss_pred EEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEee-cc---ceeE
Confidence 999999874 999999999877765 48999999999999999999999999999998654 23333332 22 2333
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--------------------CCCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG--------------------HTRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--------------------h~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
+.+.|+|+-|++++-||.|.+||.+.+..+..+.+ .....+.+++++| +..+++||...
T Consensus 526 vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaD-G~~IlAgG~sn 604 (893)
T KOG0291|consen 526 VSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSAD-GKCILAGGESN 604 (893)
T ss_pred EEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCC-CCEEEecCCcc
Confidence 45679999999999999999999987655544321 2357899999999 88999999999
Q ss_pred cEEEECCCCCC
Q psy10566 583 TVRIWGPHLNT 593 (604)
Q Consensus 583 ~I~iW~~~~~~ 593 (604)
.|++|++.++-
T Consensus 605 ~iCiY~v~~~v 615 (893)
T KOG0291|consen 605 SICIYDVPEGV 615 (893)
T ss_pred cEEEEECchhh
Confidence 99999998765
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=273.80 Aligned_cols=293 Identities=21% Similarity=0.336 Sum_probs=236.6
Q ss_pred ccceeeccc-CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCe--EEEEeC
Q psy10566 291 CETTQVLND-HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH--LLVVGP 367 (604)
Q Consensus 291 ~~~~~~l~~-H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~--l~s~~~ 367 (604)
.++++.++. |+++|.-++|+|.|..+|+|+.||.|+|||+. ...+...|+||.+.|.++.|+|+-.+ |++++.
T Consensus 94 gk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~----~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~ 169 (775)
T KOG0319|consen 94 GKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIK----NGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGAT 169 (775)
T ss_pred chHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEee----CCEEEEEecCCCceEEEEEeCCccchhheeecCC
Confidence 367788888 99999999999999999999999999999998 66788999999999999999998654 666666
Q ss_pred CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ce---------------------
Q psy10566 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QV--------------------- 425 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~--------------------- 425 (604)
|+ ++++||+.++.........|.+.|++++|.+|+..+++++.|..+.+||+.. +.
T Consensus 170 D~--~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~ 247 (775)
T KOG0319|consen 170 DG--TVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELG 247 (775)
T ss_pred Cc--eEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcC
Confidence 76 9999999976652222346888899999999999999999999999988620 00
Q ss_pred --------------eeeee-------------------------------------------------------------
Q psy10566 426 --------------LDSWE------------------------------------------------------------- 430 (604)
Q Consensus 426 --------------~~~~~------------------------------------------------------------- 430 (604)
++.+.
T Consensus 248 ~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~ 327 (775)
T KOG0319|consen 248 GKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEIL 327 (775)
T ss_pred CcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhhe
Confidence 00000
Q ss_pred -----------------------------------ce--eEEEEEEcCCCCEEEEEeCCCeEEEEEc-------------
Q psy10566 431 -----------------------------------GV--RVNCLWCRSDGKSVLAADTHHRIRTYNF------------- 460 (604)
Q Consensus 431 -----------------------------------~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~------------- 460 (604)
+| .|.++....+|..+++++.|.++++|.+
T Consensus 328 Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~ 407 (775)
T KOG0319|consen 328 DMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQA 407 (775)
T ss_pred eeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhh
Confidence 11 1334443344555666666666666643
Q ss_pred ----------------------------------CCCcc----c------ccccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 461 ----------------------------------EHLTD----S------NLLQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 461 ----------------------------------~~~~~----~------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
...+. . ....|...|++++++|+.+++++|+.|.+.
T Consensus 408 ~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDkta 487 (775)
T KOG0319|consen 408 NGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTA 487 (775)
T ss_pred cccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccce
Confidence 32100 0 112357789999999999999999999999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEE
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
++|++.......++.||+.++.++. |++..+.++|+|.|++|+||.+.+..++.++.||...|..+.|-.+ +..|+
T Consensus 488 KiW~le~~~l~~vLsGH~RGvw~V~---Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~-~~qli 563 (775)
T KOG0319|consen 488 KIWDLEQLRLLGVLSGHTRGVWCVS---FSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRN-GKQLI 563 (775)
T ss_pred eeecccCceEEEEeeCCccceEEEE---eccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeC-CcEEE
Confidence 9999999999999999999777664 4688999999999999999999999999999999999999999988 89999
Q ss_pred EEeCCCcEEEECCCCCC
Q psy10566 577 SVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~~~ 593 (604)
||+.||-|++|+++++.
T Consensus 564 S~~adGliKlWnikt~e 580 (775)
T KOG0319|consen 564 SAGADGLIKLWNIKTNE 580 (775)
T ss_pred eccCCCcEEEEeccchh
Confidence 99999999999999875
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=254.52 Aligned_cols=377 Identities=18% Similarity=0.259 Sum_probs=281.2
Q ss_pred CCChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHH
Q psy10566 83 TRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLIL 162 (604)
Q Consensus 83 ~~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 162 (604)
+..++||.+-|..++.-+||.++...+-+|....-+ +..+...+++-.|..+..+
T Consensus 7 ~~~~~ei~~aiadl~g~n~~~es~~i~~~~~~~~~~---~~~~~g~ll~kkwtSv~rl---------------------- 61 (406)
T KOG0295|consen 7 ERQRDEINMAIADLSGSNGYSESDRIFHKEASLATE---MRKKDGGLLEKKWTSVDRL---------------------- 61 (406)
T ss_pred ccchHHHHHHHHhhhccccccccceeEeecCCCccc---ccccccceeeccccccchh----------------------
Confidence 345788999999999999999999999888765432 4444455666677644332
Q ss_pred HHHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhhccccchHHHhhhhccCCCChhhHHHHHHHhhhcCCCCccC
Q psy10566 163 EQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVML 242 (604)
Q Consensus 163 ~~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~ 242 (604)
+.+..|+.. ++.-...++.+-... .+.+..+. -+
T Consensus 62 qKki~~Les------~l~~~~~el~~g~pt----------------~~~~~~~~------------------------wi 95 (406)
T KOG0295|consen 62 QKKIRELES------KLDETGDELIAGDPT----------------GSKRTPAL------------------------WI 95 (406)
T ss_pred HHHHHHHHh------hhcccccccccCCCC----------------cCccChhh------------------------cC
Confidence 222222222 111111222111110 00011111 12
Q ss_pred ChhHHHHHHHHHHHHhHhcCCCCCCCc---ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEE
Q psy10566 243 PPRRLQTLLSQAVDLQKYHCPYHNTKV---DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATG 319 (604)
Q Consensus 243 p~~rl~~ll~q~~~~q~~~~~~~~~~~---~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasg 319 (604)
|+-.|...+.+ ...+..+.++|+... ..+-+.....|| .+..++...|+||++.|.+++|+..|++||++
T Consensus 96 pRp~l~~~l~g-~r~~vt~v~~hp~~~~v~~as~d~tikv~D------~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tc 168 (406)
T KOG0295|consen 96 PRPNLVQKLAG-HRSSVTRVIFHPSEALVVSASEDATIKVFD------TETGELERSLRGHTDSVFDISFDASGKYLATC 168 (406)
T ss_pred CCCCchhhhhc-cccceeeeeeccCceEEEEecCCceEEEEE------ccchhhhhhhhccccceeEEEEecCccEEEec
Confidence 22112222222 234555666665543 122233444444 34566788999999999999999999999999
Q ss_pred ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEE
Q psy10566 320 SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCS 399 (604)
Q Consensus 320 s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 399 (604)
+.|-.+++||.+ + ...+++.+.+|...|.+++|-|.|.++++++.|. +|+.|++.+|.++..+. +|...|..++
T Consensus 169 SsDl~~~LWd~~--~-~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~--tik~We~~tg~cv~t~~-~h~ewvr~v~ 242 (406)
T KOG0295|consen 169 SSDLSAKLWDFD--T-FFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDN--TIKAWECDTGYCVKTFP-GHSEWVRMVR 242 (406)
T ss_pred CCccchhheeHH--H-HHHHHHHhcCcccceeeEEEEecCCeeeeccccc--ceeEEecccceeEEecc-CchHhEEEEE
Confidence 999999999997 2 3677888999999999999999999999999999 89999999999999998 7888999999
Q ss_pred EecCCCEEEEEecCCeEEEEEcCCC---eeeeeeceeEEEEEEcCC---------------CCEEEEEeCCCeEEEEEcC
Q psy10566 400 WNRDGTKFVCGGIRGQFYQCDIEGQ---VLDSWEGVRVNCLWCRSD---------------GKSVLAADTHHRIRTYNFE 461 (604)
Q Consensus 400 ~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~v~~l~~s~~---------------g~~l~~~~~dg~I~i~d~~ 461 (604)
.+.||..+++++.|.++++|-+..+ ..-.-+.|+|.+++|.|. +..+.+++.|++|++||+.
T Consensus 243 v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~ 322 (406)
T KOG0295|consen 243 VNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVS 322 (406)
T ss_pred ecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEecc
Confidence 9999999999999999999998533 333334557888888653 2489999999999999999
Q ss_pred CCccc-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 462 HLTDS-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 462 ~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
++.+. .+..|...|..++|+|.|+||+++..|+++++||++++++.+.+..|.. .+.+..++.+-.++++|+-|.+
T Consensus 323 tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~h---fvt~lDfh~~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 323 TGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEH---FVTSLDFHKTAPYVVTGSVDQT 399 (406)
T ss_pred CCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcc---eeEEEecCCCCceEEeccccce
Confidence 98654 4556899999999999999999999999999999999999999998877 4555666777789999999999
Q ss_pred EEEEeC
Q psy10566 541 VYIWHV 546 (604)
Q Consensus 541 I~iwd~ 546 (604)
+++|..
T Consensus 400 ~KvwEc 405 (406)
T KOG0295|consen 400 VKVWEC 405 (406)
T ss_pred eeeeec
Confidence 999974
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-31 Score=233.29 Aligned_cols=286 Identities=20% Similarity=0.328 Sum_probs=242.0
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC-CCeEEEEeCCCceEE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD-SSHLLVVGPEDCHEL 373 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd-~~~l~s~~~d~~~~i 373 (604)
+.+.+|...|.+++|+.+|..||+|+.|+++.+|+++.. .........+|.+.|-.++|+|. ...+++++.|. +|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~--r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk--~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD--RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDK--TI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch--hhhhhhcccCCCcchhhheeCCCCCcceEEecCCc--eE
Confidence 567899999999999999999999999999999999832 33444566789999999999885 45788888888 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeeec-eeEEEEEEcCCCCEEEEEeC
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWEG-VRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~-~~v~~l~~s~~g~~l~~~~~ 451 (604)
++||+..+++...+.. ...-..+.|+|+|.++++++.|..|...|... +....... ..+..++|+.++..++....
T Consensus 90 r~wd~r~~k~~~~i~~--~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~G 167 (313)
T KOG1407|consen 90 RIWDIRSGKCTARIET--KGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNG 167 (313)
T ss_pred EEEEeccCcEEEEeec--cCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecC
Confidence 9999999999988873 33445789999999999999999999999954 34333333 26788888888888888888
Q ss_pred CCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc
Q psy10566 452 HHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD 530 (604)
Q Consensus 452 dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 530 (604)
.|.|.|......+....+ .|.....|+.|+|+|+++++|+.|..+.+||+..--+++.+..+.- .|+.+.|+.+|+
T Consensus 168 lG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldw---pVRTlSFS~dg~ 244 (313)
T KOG1407|consen 168 LGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDW---PVRTLSFSHDGR 244 (313)
T ss_pred CceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccC---ceEEEEeccCcc
Confidence 899999999887766554 4788889999999999999999999999999999888888877665 566677789999
Q ss_pred EEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC---------CcEEEECCCC
Q psy10566 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD---------CTVRIWGPHL 591 (604)
Q Consensus 531 ~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D---------g~I~iW~~~~ 591 (604)
+||+||+|..|-|=++++|..+..++ +.++...|+|+|. ..+||-+++| |+|+++.+.+
T Consensus 245 ~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk-~~LLAyA~ddk~~d~~reag~vKiFG~~~ 312 (313)
T KOG1407|consen 245 MLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPK-RPLLAYACDDKDGDSNREAGTVKIFGLSN 312 (313)
T ss_pred eeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCC-CceeeEEecCCCCccccccceeEEecCCC
Confidence 99999999999999999999999987 7889999999999 7888887765 5777776543
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=246.79 Aligned_cols=278 Identities=24% Similarity=0.346 Sum_probs=235.2
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC---eEEEEeCCCceEEEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS---HLLVVGPEDCHELWVW 376 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~---~l~s~~~d~~~~i~vw 376 (604)
|.+.|.++... ++.++||++||.++|||.. ++....+.||.++|.+++|.-.+. .+++++.|. ++++|
T Consensus 104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-----Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dq--tl~Lw 174 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-----GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQ--TLRLW 174 (423)
T ss_pred chhhhhhhccc--CceEEEeecCCeeEEEecC-----CceEEEEecCCcceeeeEEEecCCccceEEEecCCc--eEEEE
Confidence 89999999988 7799999999999999984 677899999999999999854443 599999998 78888
Q ss_pred ECCCceEEEEe---cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--------------------------Ceee
Q psy10566 377 NIETELLRVKL---NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--------------------------QVLD 427 (604)
Q Consensus 377 d~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--------------------------~~~~ 427 (604)
..+.+...... ..+|...|.++...++|..+++|+.|.++.+|+... ..+.
T Consensus 175 ~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~v 254 (423)
T KOG0313|consen 175 KWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLV 254 (423)
T ss_pred EecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceE
Confidence 87776533222 238999999999999999999999999999999310 1233
Q ss_pred eeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 428 SWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 428 ~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
.+.+| +|.++.|++ ...+++++.|++|+.||+.++.....+.....+.++.++|..+++++|+.|..|++||.+++.
T Consensus 255 tl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~ 333 (423)
T KOG0313|consen 255 TLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD 333 (423)
T ss_pred EecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCC
Confidence 44555 689999988 677999999999999999999998888889999999999999999999999999999999753
Q ss_pred ---eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc-ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 506 ---LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL-PIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 506 ---~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~-~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
....|.+|.+.+..+. +.+.+...|++|+.||++++||+++.+ ++..+.+|...|.++.|+. +..++|||.|
T Consensus 334 gs~v~~s~~gH~nwVssvk--wsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~--~~~IvSGGaD 409 (423)
T KOG0313|consen 334 GSVVSQSLIGHKNWVSSVK--WSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE--GGLIVSGGAD 409 (423)
T ss_pred CceeEEeeecchhhhhhee--cCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC--CceEEeccCc
Confidence 4567889988544442 333456788999999999999999877 9999999999999999995 5799999999
Q ss_pred CcEEEECCCC
Q psy10566 582 CTVRIWGPHL 591 (604)
Q Consensus 582 g~I~iW~~~~ 591 (604)
.+|+|+.-..
T Consensus 410 ~~l~i~~~~~ 419 (423)
T KOG0313|consen 410 NKLRIFKGSP 419 (423)
T ss_pred ceEEEecccc
Confidence 9999997654
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=253.63 Aligned_cols=270 Identities=21% Similarity=0.319 Sum_probs=228.7
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
....|+|+.+. ...+++|..|++|+|||.+ ...+...+.||++.|.|+.|. .+.+++|+.|. +|++||++
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n----~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDs--TvrvWDv~ 265 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKN----SLECLKILTGHTGSVLCLQYD--ERVIVSGSSDS--TVRVWDVN 265 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccc----cHHHHHhhhcCCCcEEeeecc--ceEEEecCCCc--eEEEEecc
Confidence 55789999986 4579999999999999998 677889999999999999986 45899999998 89999999
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC----eeeeeece--eEEEEEEcCCCCEEEEEeCCC
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ----VLDSWEGV--RVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg 453 (604)
+|+++..+. +|...|..+.|+ ..++++++.|.++.+||+... ..+.+.|| .|+.+.|+ .+++++++.|.
T Consensus 266 tge~l~tli-hHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDR 340 (499)
T KOG0281|consen 266 TGEPLNTLI-HHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDR 340 (499)
T ss_pred CCchhhHHh-hhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCc
Confidence 999988877 678889999996 469999999999999999532 22344566 46666665 55999999999
Q ss_pred eEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 454 RIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
+|++|++.+.+....+. |...|.|+.+ .++++++|++|.+|++||+..|.+++.++||..-+.+|+ | +.+.|
T Consensus 341 TikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciR---F--d~krI 413 (499)
T KOG0281|consen 341 TIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR---F--DNKRI 413 (499)
T ss_pred eEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhhee---e--cCcee
Confidence 99999999988777664 6777877776 689999999999999999999999999999998655554 3 66789
Q ss_pred EEEeCCCcEEEEeCCCCc---------ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 533 ASGSEDGKVYIWHVKREL---------PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~---------~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
++|+.||+|+|||+.++. ++.++..|.+.|..+.|. ...+++++.|.+|.|||...+.+
T Consensus 414 VSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD---~fqIvsssHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 414 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD---EFQIISSSHDDTILIWDFLNGPP 481 (499)
T ss_pred eeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec---ceEEEeccCCCeEEEEEcCCCCc
Confidence 999999999999998653 455667799999999997 56799999999999999987653
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-32 Score=275.32 Aligned_cols=250 Identities=23% Similarity=0.427 Sum_probs=214.3
Q ss_pred cceeecc-cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC----------------------------C--------
Q psy10566 292 ETTQVLN-DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV----------------------------T-------- 334 (604)
Q Consensus 292 ~~~~~l~-~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~----------------------------~-------- 334 (604)
...+.+. +|.+.||++.||+||+|||+||.||.|+||.+... .
T Consensus 257 ~~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~ 336 (712)
T KOG0283|consen 257 TVVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT 336 (712)
T ss_pred EEeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccc
Confidence 3445666 89999999999999999999999999999988630 0
Q ss_pred --------------------ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCC
Q psy10566 335 --------------------FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDS 394 (604)
Q Consensus 335 --------------------~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~ 394 (604)
...+++..+.||.+.|..+.||.++ +|++++.|. +|++|++....++..|. |.+.
T Consensus 337 s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDK--TVRLWh~~~~~CL~~F~--Hndf 411 (712)
T KOG0283|consen 337 SSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDK--TVRLWHPGRKECLKVFS--HNDF 411 (712)
T ss_pred cccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccc--cEEeecCCCcceeeEEe--cCCe
Confidence 0112344567999999999999865 899999999 89999999999999997 8899
Q ss_pred eEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-
Q psy10566 395 LTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ- 470 (604)
Q Consensus 395 v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~- 470 (604)
|+|++|+| |.++|++|+-||.|++|++....+..|... -|++++|.|||+..++|+.+|.+++|+....+......
T Consensus 412 VTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I 491 (712)
T KOG0283|consen 412 VTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHI 491 (712)
T ss_pred eEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeE
Confidence 99999999 889999999999999999988888777765 59999999999999999999999999998764332211
Q ss_pred --------CCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE
Q psy10566 471 --------EDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541 (604)
Q Consensus 471 --------~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I 541 (604)
....|+.+.|.|.. ..+++.+.|..|+|||.++..++.+|+|.......+.+.+. .+|++|++|++|..|
T Consensus 492 ~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs-~Dgk~IVs~seDs~V 570 (712)
T KOG0283|consen 492 RLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFS-SDGKHIVSASEDSWV 570 (712)
T ss_pred eeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEc-cCCCEEEEeecCceE
Confidence 12379999999754 46899999999999999999999999999888777776665 699999999999999
Q ss_pred EEEeCC
Q psy10566 542 YIWHVK 547 (604)
Q Consensus 542 ~iwd~~ 547 (604)
+||+..
T Consensus 571 YiW~~~ 576 (712)
T KOG0283|consen 571 YIWKND 576 (712)
T ss_pred EEEeCC
Confidence 999974
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-31 Score=259.19 Aligned_cols=282 Identities=17% Similarity=0.198 Sum_probs=252.3
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.+.+..|++.|.++.|+|...+++++-..|.|.|||.+ +...++.+.-..-+|.+..|-+..+++++|+.|. .|
T Consensus 6 krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnye----tqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~--~I 79 (794)
T KOG0276|consen 6 KRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYE----TQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDM--QI 79 (794)
T ss_pred hhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecc----cceeeeeeeecccchhhheeeeccceEEEecCCc--eE
Confidence 45566799999999999999999999999999999998 6677888888899999999999999999999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--Ceeeeeece--eEEEEEEcC-CCCEEEE
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV--RVNCLWCRS-DGKSVLA 448 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~--~v~~l~~s~-~g~~l~~ 448 (604)
++|+..+++.+..+. .|.+.|.+++.+|...++++++.|-.|++||.++ .+.+.+.+| -|.+++|.| |.+.+++
T Consensus 80 rVfnynt~ekV~~Fe-AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS 158 (794)
T KOG0276|consen 80 RVFNYNTGEKVKTFE-AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFAS 158 (794)
T ss_pred EEEecccceeeEEee-ccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceee
Confidence 999999999999997 7899999999999999999999999999999965 566778776 699999999 5778999
Q ss_pred EeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCC--CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC
Q psy10566 449 ADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATD--RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~--~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~ 525 (604)
++-|++|++|.+....+... ..|...|+++.+-+.| .++++|+.|.+|++||..+..+++++.||.+. +.++++
T Consensus 159 ~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~N---vs~v~f 235 (794)
T KOG0276|consen 159 ASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNN---VSFVFF 235 (794)
T ss_pred eeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhccccc---ceEEEe
Confidence 99999999999998765544 4588999999998765 58999999999999999999999999999985 445566
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
.|.-.+|++||+||+++||+..+-+...++.-.-..|+|++-.+. ...++.|.+.|.|.+
T Consensus 236 hp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~-~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 236 HPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKG-DGKIAVGFDEGSVTV 295 (794)
T ss_pred cCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCC-CCeEEEeccCCcEEE
Confidence 788899999999999999999999998888888889999999988 677888888887654
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-30 Score=233.49 Aligned_cols=293 Identities=18% Similarity=0.284 Sum_probs=246.2
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
..+.+..-.+.|.++.|+++|.++++++.|.+++|||.. .++..+++..+..+|..++|......++.++....-+
T Consensus 6 ~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~----~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~t 81 (311)
T KOG1446|consen 6 PAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSL----SGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDT 81 (311)
T ss_pred cccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcC----CCceeeEeecccccccEEEEecCCceEEEccCCCCCc
Confidence 345556667889999999999999999999999999998 6777888888888999999988888888877732238
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeC
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~ 451 (604)
|+..++.+.+.++.+. +|...|.+++.+|-+..|++++.|++|++||++ .++........-..++|.|.|-.++++..
T Consensus 82 IryLsl~dNkylRYF~-GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 82 IRYLSLHDNKYLRYFP-GHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANG 160 (311)
T ss_pred eEEEEeecCceEEEcC-CCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecC
Confidence 9999999999998887 899999999999999999999999999999997 44444444445567899999999999998
Q ss_pred CCeEEEEEcCCCccc--ccc----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC
Q psy10566 452 HHRIRTYNFEHLTDS--NLL----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525 (604)
Q Consensus 452 dg~I~i~d~~~~~~~--~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~ 525 (604)
...|++||++..... ..+ ......+.+.|+|+|++++.++..+.+++.|.-+|....++.++......-..+.+
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~f 240 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATF 240 (311)
T ss_pred CCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEE
Confidence 889999999875221 111 23567899999999999999999999999999999999999988765422233455
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|+++++++|+.||+|.+|++++|+.+..+.+ +.+++.++.|+|. ..+++|+ +..+-+|-+...+
T Consensus 241 tPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~-~~mf~sa--~s~l~fw~p~~~~ 306 (311)
T KOG1446|consen 241 TPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPR-YAMFVSA--SSNLVFWLPDEDA 306 (311)
T ss_pred CCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCc-eeeeeec--CceEEEEeccccc
Confidence 69999999999999999999999999999998 7899999999997 5666665 5679999877544
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=269.52 Aligned_cols=207 Identities=18% Similarity=0.303 Sum_probs=191.6
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
....++|.||.++|..+.|+|+.++|+++|.|++|++|.+. +..+...++||..+|..+.|+|.|-|++++|.|+
T Consensus 441 ~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~----t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~- 515 (707)
T KOG0263|consen 441 SGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLD----TWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQ- 515 (707)
T ss_pred CceeEEeecCCCceeeeeecccccceeeccCCcceeeeecc----cceeEEEecCCCcceeeEEecCCceEEEecCCCc-
Confidence 44566799999999999999999999999999999999999 7778888999999999999999999999999998
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
+.++|........+.+. +|-+.|.|+.|+|++.++++|+.|.+|++||+ .|..++.|.|| +|.+++|+|+|++++
T Consensus 516 -tArLWs~d~~~PlRifa-ghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~La 593 (707)
T KOG0263|consen 516 -TARLWSTDHNKPLRIFA-GHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLA 593 (707)
T ss_pred -eeeeeecccCCchhhhc-ccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEe
Confidence 89999999877776665 78899999999999999999999999999999 79999999998 799999999999999
Q ss_pred EEeCCCeEEEEEcCCCccc-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 448 AADTHHRIRTYNFEHLTDS-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
+|+.||.|.+||+.++... ....|.+.|.++.|+.+|..|++|+.|++|++||+..-
T Consensus 594 Sg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 594 SGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred ecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 9999999999999996554 45668999999999999999999999999999998653
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-30 Score=248.22 Aligned_cols=294 Identities=16% Similarity=0.289 Sum_probs=246.5
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC--c
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED--C 370 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~--~ 370 (604)
....+.+|...++-..|||.|-|+|+|...|+|+|||.. ........+++.-.++|..|+|++|++.+++.|... .
T Consensus 51 ~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt--~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerf 128 (603)
T KOG0318|consen 51 SVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTT--QKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERF 128 (603)
T ss_pred ceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEecc--CcceeeeeeeeecccccccceeCCCCcEEEEEecCccce
Confidence 356788999999999999999999999999999999987 324445566666788999999999999999987643 3
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC-Ceeeeeece--eEEEEEEcCCCCEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEG-QVLDSWEGV--RVNCLWCRSDGKSV 446 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~-~~~~~~~~~--~v~~l~~s~~g~~l 446 (604)
+.+.+||. |...-.+. +|...|.+++|-|.. -.+++|+.|+.|.+|+-.. +.-.++..| -|+|+.|+|||..+
T Consensus 129 g~~F~~DS--G~SvGei~-GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~F 205 (603)
T KOG0318|consen 129 GHVFLWDS--GNSVGEIT-GHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRF 205 (603)
T ss_pred eEEEEecC--CCccceee-ccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeE
Confidence 46667764 55555555 788899999999965 4799999999999997532 222333333 59999999999999
Q ss_pred EEEeCCCeEEEEEcCCCccccccc----CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc-ceEEEE
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQ----EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQFTIH 521 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~~i~ 521 (604)
++++.||+|.+||-.+++....+. |.+.|.+++|+||+..+++++.|.+++|||+.+.++++++..... ....+.
T Consensus 206 at~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG 285 (603)
T KOG0318|consen 206 ATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVG 285 (603)
T ss_pred EEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEE
Confidence 999999999999999987666554 789999999999999999999999999999999999999875443 233454
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
+++ + ...|++.+-+|+|.+++...+.++..+.||...|+++..+|+ +..|.||+.||.|.-|+..++...
T Consensus 286 ~lW--q-kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d-~~~i~SgsyDG~I~~W~~~~g~~~ 355 (603)
T KOG0318|consen 286 CLW--Q-KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPD-GKTIYSGSYDGHINSWDSGSGTSD 355 (603)
T ss_pred EEE--e-CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCC-CCEEEeeccCceEEEEecCCcccc
Confidence 444 3 567999999999999999999999999999999999999999 799999999999999999887643
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-30 Score=230.35 Aligned_cols=283 Identities=17% Similarity=0.209 Sum_probs=237.5
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.|.||..+++.+.|+.+|.+|.+++.|.++.||-.. .++.+.++.||.+.|.|+...-+.+++++++.|. ++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~----nGerlGty~GHtGavW~~Did~~s~~liTGSAD~--t~kL 78 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSL----NGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQ--TAKL 78 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEec----CCceeeeecCCCceEEEEEecCCcceeeeccccc--eeEE
Confidence 478999999999999999999999999999999876 6778899999999999999999999999999998 8999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-----CeEEEEEcC-------C-Ceeeeeec--eeEEEEEEc
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-----GQFYQCDIE-------G-QVLDSWEG--VRVNCLWCR 440 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~-------~-~~~~~~~~--~~v~~l~~s 440 (604)
||+++|+++..+. ...+|..+.|+++|++++....+ +.|.++|+. + .++..+.. ..++...|.
T Consensus 79 WDv~tGk~la~~k--~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg 156 (327)
T KOG0643|consen 79 WDVETGKQLATWK--TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWG 156 (327)
T ss_pred EEcCCCcEEEEee--cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeec
Confidence 9999999999887 45789999999999998887654 578999984 1 22333332 378999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCccccc--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceE
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDSNL--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQF 518 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~ 518 (604)
|-++.+++|..+|.|.+||++++..... ..|...|+.+.++++..++++++.|.+-++||..+-+.+++|....
T Consensus 157 ~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~---- 232 (327)
T KOG0643|consen 157 PLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTER---- 232 (327)
T ss_pred ccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecc----
Confidence 9999999999999999999998643322 3467899999999999999999999999999999999999998654
Q ss_pred EEEeeeCCCCCcEEEEEeCCCc--E------------EEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 519 TIHSCFGGANQDFVASGSEDGK--V------------YIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~--I------------~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
++.+.+.+|..++++.|+.... | ++|++-..+.+..+++|-++|++|+|||+ +...+||+.||.|
T Consensus 233 PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPd-GksYsSGGEDG~V 311 (327)
T KOG0643|consen 233 PVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPD-GKSYSSGGEDGYV 311 (327)
T ss_pred cccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCC-CcccccCCCCceE
Confidence 4555666787777777764322 1 22222233556677999999999999999 8999999999999
Q ss_pred EEECCCC
Q psy10566 585 RIWGPHL 591 (604)
Q Consensus 585 ~iW~~~~ 591 (604)
|+...+.
T Consensus 312 R~h~Fd~ 318 (327)
T KOG0643|consen 312 RLHHFDS 318 (327)
T ss_pred EEEEecc
Confidence 9976554
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-31 Score=264.17 Aligned_cols=290 Identities=18% Similarity=0.281 Sum_probs=246.3
Q ss_pred ccceeecccCCCcEEEEEEc-CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFS-PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fs-pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.+..+.+-|-.+.|.+|+|- |+.++||.++..+.+++|++. +..+ ..+.||+..|.++....+|..|++|+.|.
T Consensus 313 l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~--~~~c---~ii~GH~e~vlSL~~~~~g~llat~sKD~ 387 (775)
T KOG0319|consen 313 LTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLP--TSYC---QIIPGHTEAVLSLDVWSSGDLLATGSKDK 387 (775)
T ss_pred cEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecC--CCce---EEEeCchhheeeeeecccCcEEEEecCCc
Confidence 56677788999999999975 567899999999999999887 2222 38899999999999667788999999999
Q ss_pred ceEEEEEECCCceE---EEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCC----eeee--------eecee
Q psy10566 370 CHELWVWNIETELL---RVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQ----VLDS--------WEGVR 433 (604)
Q Consensus 370 ~~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~----~~~~--------~~~~~ 433 (604)
++++|.++++.. ......+|...|.+++++..+ .+|+++|.|+++++|++... .... .++..
T Consensus 388 --svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKd 465 (775)
T KOG0319|consen 388 --SVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKD 465 (775)
T ss_pred --eEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhccc
Confidence 899998855432 222334789999999997754 68999999999999999541 1111 12336
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
|++++++|+.+.+++|+.|.+.++|+++.......+ +|...+.++.|+|..+.+++++.|.+|+||.+.+..++++|.|
T Consensus 466 IN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eG 545 (775)
T KOG0319|consen 466 INCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEG 545 (775)
T ss_pred ccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecC
Confidence 999999999999999999999999999976655444 5789999999999999999999999999999999999999999
Q ss_pred cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
|...+... .|. .+|..|++++.||-|++|+++++.++.++.+|++.|++++-+|. ..+++||+.||.|.+|.=.+
T Consensus 546 H~~aVlra--~F~-~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~-~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 546 HTSAVLRA--SFI-RNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPL-LDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred ccceeEee--eee-eCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCc-cceeEecCCCeEEEEeecCc
Confidence 99875554 333 78899999999999999999999999999999999999999999 77999999999999996444
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=262.19 Aligned_cols=283 Identities=22% Similarity=0.338 Sum_probs=251.7
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
-.+.||...|.+++||.|...++||+ .+.++||+.. +.+++.++... -+.+..|.|.++++++|...| .+.
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~----t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~G--el~ 437 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRD----TLKCIRTITCG--YILASKFVPGDRYIVLGTKNG--ELQ 437 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEcc----CcceeEEeccc--cEEEEEecCCCceEEEeccCC--ceE
Confidence 45789999999999999998888875 6789999998 77888888753 789999999999999999988 899
Q ss_pred EEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC------CCeee--eee-------ceeEEEEEE
Q psy10566 375 VWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE------GQVLD--SWE-------GVRVNCLWC 439 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~------~~~~~--~~~-------~~~v~~l~~ 439 (604)
+||+.+...+-.+. .|.+.+++++.+||++.+++|+.|.+|++||.. |..-+ .+. ...|.|+.+
T Consensus 438 vfdlaS~~l~Eti~-AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~ 516 (888)
T KOG0306|consen 438 VFDLASASLVETIR-AHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSV 516 (888)
T ss_pred EEEeehhhhhhhhh-ccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEE
Confidence 99999988877776 899999999999999999999999999999972 21111 111 126899999
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCcc-cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceE
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTD-SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQF 518 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~ 518 (604)
||||++++++--|.++++|-+.+.+. ..+++|.-||.|+.++||++.+++|+.|..|++|-+.-|.+-+.+-+|...+.
T Consensus 517 Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm 596 (888)
T KOG0306|consen 517 SPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVM 596 (888)
T ss_pred cCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCcee
Confidence 99999999999999999999999764 45678999999999999999999999999999999999999999999998766
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.. -|...++++++.|+.|+-||-...+.+..+.+|...|+|++.+|+ +.+++|+|.|.+||+|....
T Consensus 597 ~V~F---~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~-G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 597 SVQF---LPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPN-GSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred EEEE---cccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCC-CCeEEeccCCceeEeeeccC
Confidence 6644 378889999999999999999999999999999999999999999 89999999999999998754
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=253.82 Aligned_cols=239 Identities=18% Similarity=0.326 Sum_probs=213.9
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL 426 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 426 (604)
..+|..+.|.|+|+.|++|+..| .+.+|+..+-.. ..+.+.|.++|.++.|++++.++++|+.+|.|++|+.+-+.+
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SG--EFtLWNg~~fnF-EtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnV 172 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSG--EFTLWNGTSFNF-ETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNV 172 (464)
T ss_pred ccceeeEEEcCCCceeEeecccc--cEEEecCceeeH-HHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhh
Confidence 35799999999999999999998 899999744322 233458999999999999999999999999999999987766
Q ss_pred eeeece---eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 427 DSWEGV---RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 427 ~~~~~~---~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
+.+..+ .|++++|+|+...+++++.||+|+|||+...+.... ..|.-.|.+++|+|.-.++++++.|+.|++||.+
T Consensus 173 k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDpr 252 (464)
T KOG0284|consen 173 KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPR 252 (464)
T ss_pred HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCC
Confidence 666554 699999999999999999999999999988766554 4578899999999999999999999999999999
Q ss_pred CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
++.++.++.+|+.. |..+.|.+++++|+++|.|..++++|+++.+.+.++++|...|+++.|+|-...+|++|+.||
T Consensus 253 Sg~cl~tlh~HKnt---Vl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg 329 (464)
T KOG0284|consen 253 SGSCLATLHGHKNT---VLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDG 329 (464)
T ss_pred Ccchhhhhhhccce---EEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCC
Confidence 99999999999984 444556799999999999999999999999999999999999999999999889999999999
Q ss_pred cEEEECCCC
Q psy10566 583 TVRIWGPHL 591 (604)
Q Consensus 583 ~I~iW~~~~ 591 (604)
.|..|.+..
T Consensus 330 svvh~~v~~ 338 (464)
T KOG0284|consen 330 SVVHWVVGL 338 (464)
T ss_pred ceEEEeccc
Confidence 999999873
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-31 Score=242.13 Aligned_cols=250 Identities=18% Similarity=0.321 Sum_probs=229.5
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
.++....+.+|.+.|.|+++.|.+.++++++.|+ +++|||+.+|++...+. +|...|..+++++...++++++.|+.
T Consensus 140 pwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~Dr--tikIwDlatg~Lkltlt-Ghi~~vr~vavS~rHpYlFs~gedk~ 216 (460)
T KOG0285|consen 140 PWKLYRVISGHLGWVRSVAVDPGNEWFATGSADR--TIKIWDLATGQLKLTLT-GHIETVRGVAVSKRHPYLFSAGEDKQ 216 (460)
T ss_pred cceehhhhhhccceEEEEeeCCCceeEEecCCCc--eeEEEEcccCeEEEeec-chhheeeeeeecccCceEEEecCCCe
Confidence 3566778899999999999999999999999999 89999999999988887 78889999999999999999999999
Q ss_pred EEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEe
Q psy10566 416 FYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 416 i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~ 491 (604)
|+.||++ .+.++.+.+| .|.|+...|.-..+++++.|.++++||+++......+. |..+|.++.+.|....+++|+
T Consensus 217 VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S 296 (460)
T KOG0285|consen 217 VKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGS 296 (460)
T ss_pred eEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEec
Confidence 9999994 7888999998 79999999999999999999999999999987666554 899999999999999999999
Q ss_pred cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCC
Q psy10566 492 STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVY 571 (604)
Q Consensus 492 ~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~ 571 (604)
.|++|++||++.++...++..|.. .++++...|....+|+++.|. |+-|++..|..+..+.+|..-|++++.+.|
T Consensus 297 ~D~tvrlWDl~agkt~~tlt~hkk---svral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~~iintl~~nsD- 371 (460)
T KOG0285|consen 297 HDSTVRLWDLRAGKTMITLTHHKK---SVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSGHNAIINTLSVNSD- 371 (460)
T ss_pred CCceEEEeeeccCceeEeeecccc---eeeEEecCCchhhhhccCCcc-ceeccCCccchhhccccccceeeeeeeccC-
Confidence 999999999999999999988877 566677789999999998885 899999999999999999999999999987
Q ss_pred CcEEEEEeCCCcEEEECCCCCCC
Q psy10566 572 HQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
.++++|++.|.+.+||.+++.+
T Consensus 372 -~v~~~G~dng~~~fwdwksg~n 393 (460)
T KOG0285|consen 372 -GVLVSGGDNGSIMFWDWKSGHN 393 (460)
T ss_pred -ceEEEcCCceEEEEEecCcCcc
Confidence 5889999999999999998763
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=241.59 Aligned_cols=266 Identities=16% Similarity=0.234 Sum_probs=226.2
Q ss_pred ccccCccccccccCcCc--CCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-cC
Q psy10566 270 DESLENVSLLVDHLCTK--EEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-GH 346 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~--~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-~h 346 (604)
+++.|.+.-.|+....+ ++...+....+--|.++|.|+.||.|..+||+|+.||.|+||.+. ++.+++.+. .|
T Consensus 230 sgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~----tG~ClRrFdrAH 305 (508)
T KOG0275|consen 230 SGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE----TGQCLRRFDRAH 305 (508)
T ss_pred eccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe----cchHHHHhhhhh
Confidence 56677788888876553 444455555666799999999999999999999999999999999 777788887 79
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCe
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQV 425 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~ 425 (604)
+.+|+|+.||.|+..+++++.|. ++++.-+.+|+++..+. +|.+.|+.+.|.++|..+++++.||+|++|+. .+.+
T Consensus 306 tkGvt~l~FSrD~SqiLS~sfD~--tvRiHGlKSGK~LKEfr-GHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC 382 (508)
T KOG0275|consen 306 TKGVTCLSFSRDNSQILSASFDQ--TVRIHGLKSGKCLKEFR-GHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTEC 382 (508)
T ss_pred ccCeeEEEEccCcchhhcccccc--eEEEeccccchhHHHhc-CccccccceEEcCCCCeEEEecCCccEEEecCcchhh
Confidence 99999999999999999999998 89999999999999887 89999999999999999999999999999998 4666
Q ss_pred eeeeec----eeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCccccccc---CCCCeeEEEECCCCCEEEEEecCCeEE
Q psy10566 426 LDSWEG----VRVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLTDSNLLQ---EDHPVMSFTIDATDRLALLNVSTQGVH 497 (604)
Q Consensus 426 ~~~~~~----~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~I~ 497 (604)
+.++.. .+|+.+...| +...++++...++|++.++...-...+.. ..+...+.+++|.|.++++.+.|+.++
T Consensus 383 ~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlY 462 (508)
T KOG0275|consen 383 LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLY 462 (508)
T ss_pred hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEE
Confidence 666654 3677777666 56778999999999999987654333322 356778889999999999999999999
Q ss_pred EEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
.|...+|+..+++.-|...+.. +...|..+.+|+-++||.+++|.
T Consensus 463 CF~~~sG~LE~tl~VhEkdvIG---l~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 463 CFSVLSGKLERTLPVHEKDVIG---LTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EEEeecCceeeeeecccccccc---cccCcccchhhhhcccchhhhcC
Confidence 9999999999999888875544 34568999999999999999995
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=247.47 Aligned_cols=301 Identities=18% Similarity=0.254 Sum_probs=237.5
Q ss_pred CCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEE
Q psy10566 287 EEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVV 365 (604)
Q Consensus 287 ~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~ 365 (604)
..+|..+-..|++|+..|.++++.|.|..|+|||.|.+|++||+..........+.+.. ....|.++.|++.|..|++.
T Consensus 153 ~~IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvv 232 (641)
T KOG0772|consen 153 KLIPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVV 232 (641)
T ss_pred hcCCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEE
Confidence 45788888899999999999999999999999999999999999844444433333332 34589999999999999988
Q ss_pred eCCCceEEEEEECCCceEEEEe-----------cCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC--Ceeeeeec
Q psy10566 366 GPEDCHELWVWNIETELLRVKL-----------NHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEG--QVLDSWEG 431 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~--~~~~~~~~ 431 (604)
+... ..+++|-......... ..+|...++|.+|+|+. ..|++++.||++++||++. +....+..
T Consensus 233 sg~a--qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~ 310 (641)
T KOG0772|consen 233 SGSA--QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKT 310 (641)
T ss_pred ecCc--ceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEee
Confidence 8877 7999997654433222 24678889999999955 5899999999999999953 22222221
Q ss_pred -------eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc--c--cC--CCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 432 -------VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL--L--QE--DHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 432 -------~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~--~--~~--~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
..++.++|+++|+.+++|+.||.|.+|+......... + .| ...|+|+.|+++|++|++-+.|+++++
T Consensus 311 k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKv 390 (641)
T KOG0772|consen 311 KPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKV 390 (641)
T ss_pred ccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceee
Confidence 2688999999999999999999999999865432221 1 23 348999999999999999999999999
Q ss_pred EecCCC-ceeeEeeccccceEEEEeeeCCCCCcEEEEEeC------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCC
Q psy10566 499 WDLRDR-ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVY 571 (604)
Q Consensus 499 wd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~ 571 (604)
||++.. +++....+..... ...-|+|+|+.++|++|+. .|.+++||..+-..++.+.-....|..+.|||.
T Consensus 391 WDLrq~kkpL~~~tgL~t~~-~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Whpk- 468 (641)
T KOG0772|consen 391 WDLRQFKKPLNVRTGLPTPF-PGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPK- 468 (641)
T ss_pred eeccccccchhhhcCCCccC-CCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecch-
Confidence 999974 4555555544332 2233566799999999964 478999999999999999888889999999998
Q ss_pred CcEEEEEeCCCcEEEE-CCCC
Q psy10566 572 HQMIASVSDDCTVRIW-GPHL 591 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW-~~~~ 591 (604)
-+.|..++.||+++|| |.+.
T Consensus 469 LNQi~~gsgdG~~~vyYdp~~ 489 (641)
T KOG0772|consen 469 LNQIFAGSGDGTAHVYYDPNE 489 (641)
T ss_pred hhheeeecCCCceEEEECccc
Confidence 6677777888999875 5543
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-28 Score=229.34 Aligned_cols=278 Identities=19% Similarity=0.277 Sum_probs=239.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
..+.++...|....++||+.|.++.++|.. ..+.+..++||...|+.+.|+|+...+++++.|. .|++|.....
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~----s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~--~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKP----SNQILATLKGHTKKITSVKFHKDLDTVITASADE--IIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecc----hhhhhhhccCcceEEEEEEeccchhheeecCCcc--eEEeeccccc
Confidence 468888888887799999999999999988 6678899999999999999999999999999998 8999998877
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec----eeEEEEEEcCCCCEEEEEeCCCeEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG----VRVNCLWCRSDGKSVLAADTHHRIR 456 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~----~~v~~l~~s~~g~~l~~~~~dg~I~ 456 (604)
....... .|..+|+.+..+|.|.||++++.||...+.|++ +..+..... ..+++.+|+|||..+.+|..|+.++
T Consensus 294 s~~~~~~-~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vk 372 (506)
T KOG0289|consen 294 SEPTSSR-PHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVK 372 (506)
T ss_pred cCccccc-cccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEE
Confidence 6544443 788999999999999999999999999999994 555544433 3689999999999999999999999
Q ss_pred EEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 457 TYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 457 i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
+||+....... +-.|.++|..++|+.+|.+|++++.|+.|++||++..+..+++...... .+....+.+.|.+++.+
T Consensus 373 iwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~--~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 373 IWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK--EVNSLSFDQSGTYLGIA 450 (506)
T ss_pred EEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccc--cceeEEEcCCCCeEEee
Confidence 99999876544 4458999999999999999999999999999999998888888755432 45556667899999999
Q ss_pred eCCCcEEEEeCC--CCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 536 SEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 536 s~dg~I~iwd~~--~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+.|=.|++++-. +...+..+..|.+..+++.|... ..+++++|.|..++++.+
T Consensus 451 g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~-aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 451 GSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEH-AQYLASTSMDAILRLYAL 505 (506)
T ss_pred cceeEEEEEecccccceeeehhhhcccccceeeeccc-ceEEeeccchhheEEeec
Confidence 888777777744 56778888889999999999988 899999999999998764
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=254.92 Aligned_cols=285 Identities=16% Similarity=0.237 Sum_probs=246.2
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
++.-+..|..++|+|...+++++-..|.|.+||.. -+.++..|..|.++|..++|+|....+++||.|- +|++|
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYR----M~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDy--kIkVW 78 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYR----MGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDY--KIKVW 78 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhh----hhhHHhhhhccCCccceeeecCCCCeEEecCCcc--EEEEE
Confidence 44566789999999999999999999999999998 7778899999999999999999999999999988 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCC
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg 453 (604)
+..+.+++.++. +|-+.|..+.|++.-.+++++|.|.+|++|+. +++++....|| -|.|..|+|....+++++-|.
T Consensus 79 nYk~rrclftL~-GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQ 157 (1202)
T KOG0292|consen 79 NYKTRRCLFTLL-GHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQ 157 (1202)
T ss_pred ecccceehhhhc-cccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccc
Confidence 999999999887 88999999999999999999999999999999 67888888876 699999999999999999999
Q ss_pred eEEEEEcCCCcccc------------------------------cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 454 RIRTYNFEHLTDSN------------------------------LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 454 ~I~i~d~~~~~~~~------------------------------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
+|++||+...+... +-+|...|+-++|+|.-..+++|+.|..|++|.+..
T Consensus 158 TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne 237 (1202)
T KOG0292|consen 158 TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 237 (1202)
T ss_pred eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc
Confidence 99999986532111 112466788899999999999999999999999876
Q ss_pred Cce--eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 504 RIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 504 ~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
.+. +-+..+|.+. +.++.++|..++|++.|+|++|+|||+...+.+.+++-..+.-+.++-+|. .+++|.|- |
T Consensus 238 tKaWEvDtcrgH~nn---Vssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~-lNLfAAgH-D 312 (1202)
T KOG0292|consen 238 TKAWEVDTCRGHYNN---VSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPE-LNLFAAGH-D 312 (1202)
T ss_pred ccceeehhhhcccCC---cceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCC-cceeeeec-C
Confidence 543 4456677774 445566799999999999999999999999999999877888999999998 77777665 5
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
+-+.|+.+...+
T Consensus 313 sGm~VFkleREr 324 (1202)
T KOG0292|consen 313 SGMIVFKLERER 324 (1202)
T ss_pred CceEEEEEcccC
Confidence 556777776443
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=219.11 Aligned_cols=261 Identities=18% Similarity=0.284 Sum_probs=207.4
Q ss_pred ccCccccccccCcCcCCCCccceeec-ccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCe
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQVL-NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~l-~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V 350 (604)
+-+....+|+... .+. ..+..+| .+|+..|.+++|+|.|++||+||.|.++.||.-. ...++++.++.||...|
T Consensus 34 g~Dk~vriw~~~~-~~s--~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~--~~efecv~~lEGHEnEV 108 (312)
T KOG0645|consen 34 GTDKAVRIWSTSS-GDS--WTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKE--DGEFECVATLEGHENEV 108 (312)
T ss_pred cCCceEEEEecCC-CCc--EEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecC--CCceeEEeeeeccccce
Confidence 3355556665442 111 3444444 4799999999999999999999999999999977 66788899999999999
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-C---C
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-G---Q 424 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~---~ 424 (604)
.|++|+++|.+|++|+.|+ +|++|.+..+. ....+...|...|..+.|+|....|++++.|.+|++|.-. + .
T Consensus 109 K~Vaws~sG~~LATCSRDK--SVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~ 186 (312)
T KOG0645|consen 109 KCVAWSASGNYLATCSRDK--SVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWE 186 (312)
T ss_pred eEEEEcCCCCEEEEeeCCC--eEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCee
Confidence 9999999999999999999 89999998543 2233335889999999999999999999999999999764 3 4
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
+...+.++ .|.+++|.+.|..+++++.|++++||-..+. ....+..++..+.|. ...|++++.|+.|++|.-.
T Consensus 187 c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~---~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s 261 (312)
T KOG0645|consen 187 CVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD---LSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKES 261 (312)
T ss_pred EEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC---cchhcccceEeeeec--ccceEeccCCCEEEEEEec
Confidence 67777777 7999999999999999999999999986521 122356778889998 6689999999999999766
Q ss_pred CCc--e----ee-EeeccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCC
Q psy10566 503 DRI--L----LR-KFQGVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 503 ~~~--~----~~-~~~~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~ 547 (604)
..- + +. .-..|.. .|.++.+.|. .+.|++|++||.|++|.+.
T Consensus 262 ~~~d~p~~~l~~~~~~aHe~---dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 262 DSPDEPSWNLLAKKEGAHEV---DVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCCCCchHHHHHhhhccccc---ccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 421 1 11 1223433 5556666674 7899999999999999864
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-29 Score=224.77 Aligned_cols=250 Identities=18% Similarity=0.277 Sum_probs=217.1
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
.++..+.+|++.|+.+.|+|+|.+|+++|.|. .|.+|++.....-.....+|.+.|..+.|.+|++.+++++.|.+++
T Consensus 38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr--~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~ 115 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDR--AIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVR 115 (338)
T ss_pred chhhhcCCCcceEEEEEECCCCCeEeecCCcc--eEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEE
Confidence 45567889999999999999999999999998 8999997665544444458999999999999999999999999999
Q ss_pred EEEc-CCCeeeeeece--eEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC
Q psy10566 418 QCDI-EGQVLDSWEGV--RVNCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST 493 (604)
Q Consensus 418 iwd~-~~~~~~~~~~~--~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 493 (604)
.||+ .|+.++.+.+| -++.+..+.-|. .+.+++.|+++++||+++......+....+++++.|..++..+.+|+-|
T Consensus 116 ~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggId 195 (338)
T KOG0265|consen 116 GWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGID 195 (338)
T ss_pred EEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeecccc
Confidence 9999 68999988887 467776544444 4667888999999999999998888889999999999999999999999
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC----CcceEEeeCCC----CCeeEE
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR----ELPIATLSGHT----RTVSCV 565 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~----~~~~~~l~~h~----~~V~~v 565 (604)
+.|++||++.+.....+.||...+ ..++.+++|.++.+-+.|.++++||++. ..++..+.+|. .....+
T Consensus 196 n~ikvWd~r~~d~~~~lsGh~DtI---t~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~c 272 (338)
T KOG0265|consen 196 NDIKVWDLRKNDGLYTLSGHADTI---TGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKC 272 (338)
T ss_pred CceeeeccccCcceEEeecccCce---eeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhccee
Confidence 999999999999999999999854 4456679999999999999999999984 34477788764 345678
Q ss_pred EEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 566 AWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 566 ~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|+|+ +..+..|+.|..+++||.....
T Consensus 273 swsp~-~~~i~ags~dr~vyvwd~~~r~ 299 (338)
T KOG0265|consen 273 SWSPN-GTKITAGSADRFVYVWDTTSRR 299 (338)
T ss_pred eccCC-CCccccccccceEEEeeccccc
Confidence 99999 8999999999999999997743
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=246.85 Aligned_cols=248 Identities=20% Similarity=0.338 Sum_probs=224.0
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
+++..++..|.++.|+|....++++-..| .|.+||.++...+..+. -...+|.++.|-+.-+++++|+.|..|++|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG--~V~IWnyetqtmVksfe-V~~~PvRa~kfiaRknWiv~GsDD~~IrVfn 83 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNG--DVQIWNYETQTMVKSFE-VSEVPVRAAKFIARKNWIVTGSDDMQIRVFN 83 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecC--eeEEEecccceeeeeee-ecccchhhheeeeccceEEEecCCceEEEEe
Confidence 44556889999999999999999999888 89999999998888887 4567899999999999999999999999999
Q ss_pred c-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--cccccccCCCCeeEEEECCCC-CEEEEEecCC
Q psy10566 421 I-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL--TDSNLLQEDHPVMSFTIDATD-RLALLNVSTQ 494 (604)
Q Consensus 421 ~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~--~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg 494 (604)
. ++..++.|+.| -|.+++.+|...++++++.|-.|++||.+.. ......+|.+-|++++|+|.. +.+++++-|+
T Consensus 84 ynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDr 163 (794)
T KOG0276|consen 84 YNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDR 163 (794)
T ss_pred cccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccc
Confidence 9 58899999988 5999999999999999999999999999875 334455689999999999954 7899999999
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
+|++|.+.+..+..++.+|..++.++.... ..+..++++|++|.+|+|||..+..+++++.||...|+.+.|+|. -.+
T Consensus 164 TVKVWslgs~~~nfTl~gHekGVN~Vdyy~-~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~-lpi 241 (794)
T KOG0276|consen 164 TVKVWSLGSPHPNFTLEGHEKGVNCVDYYT-GGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE-LPI 241 (794)
T ss_pred cEEEEEcCCCCCceeeeccccCcceEEecc-CCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCC-CcE
Confidence 999999999999999999999988886433 356679999999999999999999999999999999999999999 899
Q ss_pred EEEEeCCCcEEEECCCCCC
Q psy10566 575 IASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~~ 593 (604)
++|||.||++|||+..+.+
T Consensus 242 iisgsEDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 242 IISGSEDGTVRIWNSKTYK 260 (794)
T ss_pred EEEecCCccEEEecCccee
Confidence 9999999999999988765
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=215.58 Aligned_cols=245 Identities=17% Similarity=0.216 Sum_probs=216.3
Q ss_pred eeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEE
Q psy10566 339 HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ 418 (604)
Q Consensus 339 ~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 418 (604)
....+..|.++|.++.|+-||+|.++||.|. +|++|+...|.++.++. +|...|..++.+.|+..|++|+.|..+.+
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdr--tvrLWNp~rg~liktYs-ghG~EVlD~~~s~Dnskf~s~GgDk~v~v 85 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDR--TVRLWNPLRGALIKTYS-GHGHEVLDAALSSDNSKFASCGGDKAVQV 85 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCc--eEEeecccccceeeeec-CCCceeeeccccccccccccCCCCceEEE
Confidence 4567888999999999999999999999999 89999999999999887 78889999999999999999999999999
Q ss_pred EEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--ccccc-CCCCeeEEEECCCCCEEEEEec
Q psy10566 419 CDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLLQ-EDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 419 wd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~~-~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
||+ .|+.++.|.+| .|+.+.|+.+...+++|+.|.++++||.++... ..++. ....|.++.++ +..++.|+.
T Consensus 86 wDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~ 163 (307)
T KOG0316|consen 86 WDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSV 163 (307)
T ss_pred EEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeecc
Confidence 999 69999999998 899999999999999999999999999988643 33443 35678887774 678999999
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee--EEEEcCC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS--CVAWNPV 570 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~--~v~~sp~ 570 (604)
||+++.||++.|.....+-++ +|.++.++++++....++-|+++++.|-.+|+++..++||...-. ..+++..
T Consensus 164 DGtvRtydiR~G~l~sDy~g~-----pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qs 238 (307)
T KOG0316|consen 164 DGTVRTYDIRKGTLSSDYFGH-----PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQS 238 (307)
T ss_pred CCcEEEEEeecceeehhhcCC-----cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeeccc
Confidence 999999999999888877776 456667789999999999999999999999999999999976443 3456655
Q ss_pred CCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
...+++||+||.|.+||+-....
T Consensus 239 -dthV~sgSEDG~Vy~wdLvd~~~ 261 (307)
T KOG0316|consen 239 -DTHVFSGSEDGKVYFWDLVDETQ 261 (307)
T ss_pred -ceeEEeccCCceEEEEEecccee
Confidence 68899999999999999987653
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=254.41 Aligned_cols=249 Identities=18% Similarity=0.348 Sum_probs=219.2
Q ss_pred eEEeccC-CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeE
Q psy10566 340 RKTLEGH-TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416 (604)
Q Consensus 340 ~~~l~~h-~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 416 (604)
...+.+| ...|.++.|+|+|+.+++++.++ .+++|+..+.. ....+ .+|...|.+++|+|+++++++++.|++|
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~--~i~~~~~~~~~~~~~~~l-~~h~~~v~~~~fs~d~~~l~s~s~D~ti 227 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDG--LIRIWKLEGIKSNLLREL-SGHTRGVSDVAFSPDGSYLLSGSDDKTL 227 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCC--cEEEeecccccchhhccc-cccccceeeeEECCCCcEEEEecCCceE
Confidence 3444444 78899999999999999999998 89999997776 44444 4788999999999999999999999999
Q ss_pred EEEEc-C-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEe
Q psy10566 417 YQCDI-E-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 417 ~iwd~-~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~ 491 (604)
++||+ . +..++.+.+| .|.+++|+|+|+.+++|+.|++|++||+++++....+ .|...|++++|++++.++++++
T Consensus 228 riwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s 307 (456)
T KOG0266|consen 228 RIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSAS 307 (456)
T ss_pred EEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcC
Confidence 99999 4 4788999888 6999999999999999999999999999997666555 4788999999999999999999
Q ss_pred cCCeEEEEecCCCc--eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC---eeEEE
Q psy10566 492 STQGVHLWDLRDRI--LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT---VSCVA 566 (604)
Q Consensus 492 ~dg~I~lwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~---V~~v~ 566 (604)
.|+.|++||+.++. ++..+.++.... .+.++.++|++.++++++.|+.+++||+..+..+..+.+|... +.+..
T Consensus 308 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (456)
T KOG0266|consen 308 YDGTIRVWDLETGSKLCLKLLSGAENSA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPT 386 (456)
T ss_pred CCccEEEEECCCCceeeeecccCCCCCC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEeccc
Confidence 99999999999998 678888887776 7788888999999999999999999999999999999999764 33445
Q ss_pred EcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 567 WNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 567 ~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.++. +.++++|+.|+.|++|++.++.
T Consensus 387 ~~~~-~~~i~sg~~d~~v~~~~~~s~~ 412 (456)
T KOG0266|consen 387 LSTG-GKLIYSGSEDGSVYVWDSSSGG 412 (456)
T ss_pred ccCC-CCeEEEEeCCceEEEEeCCccc
Confidence 5666 8999999999999999999754
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-28 Score=226.30 Aligned_cols=261 Identities=21% Similarity=0.324 Sum_probs=215.8
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+++-|....+|+... ......+.||++.|+|+.||.||.+||||+.+|.|+||+.. +......+...-..
T Consensus 81 TGGgDD~AflW~~~~------ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s----tg~~~~~~~~e~~d 150 (399)
T KOG0296|consen 81 TGGGDDLAFLWDIST------GEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS----TGGEQWKLDQEVED 150 (399)
T ss_pred ecCCCceEEEEEccC------CcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc----cCceEEEeecccCc
Confidence 445566777777543 33567899999999999999999999999999999999998 44444555555677
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~ 428 (604)
|.-+.|+|.+..|++|+.|| .+|+|.+.++.....+. +|..++++=.|.|+|+.++++..||+|++|+. .++.+..
T Consensus 151 ieWl~WHp~a~illAG~~DG--svWmw~ip~~~~~kv~~-Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~ 227 (399)
T KOG0296|consen 151 IEWLKWHPRAHILLAGSTDG--SVWMWQIPSQALCKVMS-GHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHK 227 (399)
T ss_pred eEEEEecccccEEEeecCCC--cEEEEECCCcceeeEec-CCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEE
Confidence 88999999999999999998 89999999975555554 79999999999999999999999999999998 4554443
Q ss_pred eece--------------------------------------------------------eEEEEEEcCCCCEEEEEeCC
Q psy10566 429 WEGV--------------------------------------------------------RVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 429 ~~~~--------------------------------------------------------~v~~l~~s~~g~~l~~~~~d 452 (604)
..+. .|..+.++..-...++|+-|
T Consensus 228 ~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vd 307 (399)
T KOG0296|consen 228 ITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVD 307 (399)
T ss_pred ecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhccccc
Confidence 3200 01112222233457788999
Q ss_pred CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 453 HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
|+|.|||+...+......|..+|+.+.|-+ ..++++++.+|.|+.||.++|.++.++.||...+..+ ..+|+++++
T Consensus 308 G~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f---~ls~~~~~v 383 (399)
T KOG0296|consen 308 GTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDF---ALSPQKRLV 383 (399)
T ss_pred ceEEEEecccchhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEE---EEcCCCcEE
Confidence 999999999999999999999999999998 8899999999999999999999999999999866554 446999999
Q ss_pred EEEeCCCcEEEEeCC
Q psy10566 533 ASGSEDGKVYIWHVK 547 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~ 547 (604)
+++|.|++.+||+..
T Consensus 384 vT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 384 VTVSDDNTALVFEVP 398 (399)
T ss_pred EEecCCCeEEEEecC
Confidence 999999999999864
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-28 Score=243.82 Aligned_cols=301 Identities=17% Similarity=0.259 Sum_probs=236.8
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
|....+|+.... ....++.||+.+|+++.|+..|..|||||.|+.|.+||+- .-.-...+.||...|+..
T Consensus 86 DGsVqif~~~s~------~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV----~E~Gl~rL~GHkd~iT~~ 155 (888)
T KOG0306|consen 86 DGSVQIFSLESE------EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLV----GEEGLFRLRGHKDSITQA 155 (888)
T ss_pred CceEEeeccCCC------ceeeeecccccceEEEEEcccCceEeecCCCccEEEEEec----cceeeEEeecchHHHhHH
Confidence 444555554322 4567899999999999999999999999999999999998 334468899999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC--------------------
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-------------------- 413 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------------- 413 (604)
-|..+.+.+++++.|+ .|++||+++..+..+.. .|...++.+++.+ +.+++++.|
T Consensus 156 ~F~~~~~~lvS~sKDs--~iK~WdL~tqhCf~Thv-d~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~ 230 (888)
T KOG0306|consen 156 LFLNGDSFLVSVSKDS--MIKFWDLETQHCFETHV-DHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRY 230 (888)
T ss_pred hccCCCeEEEEeccCc--eEEEEecccceeeeEEe-cccceEEEEEEec--ceEEEEecCCceEEEEeeccccccccccc
Confidence 9999889999999998 89999998755444332 2333333333322 233333333
Q ss_pred --------------------------------------------------------------------------------
Q psy10566 414 -------------------------------------------------------------------------------- 413 (604)
Q Consensus 414 -------------------------------------------------------------------------------- 413 (604)
T Consensus 231 ~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~ 310 (888)
T KOG0306|consen 231 ISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDE 310 (888)
T ss_pred ceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy10566 414 -------------------------------------------------------------------------------- 413 (604)
Q Consensus 414 -------------------------------------------------------------------------------- 413 (604)
T Consensus 311 i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~S 390 (888)
T KOG0306|consen 311 IKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLAS 390 (888)
T ss_pred HHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeee
Confidence
Q ss_pred ---CeEEEEEcC-CCeeeeee----------------------------------------ce--eEEEEEEcCCCCEEE
Q psy10566 414 ---GQFYQCDIE-GQVLDSWE----------------------------------------GV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 414 ---g~i~iwd~~-~~~~~~~~----------------------------------------~~--~v~~l~~s~~g~~l~ 447 (604)
+.+++|+.+ .++++++. .| .+.+++.+||++.++
T Consensus 391 ga~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~v 470 (888)
T KOG0306|consen 391 GAGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFV 470 (888)
T ss_pred cCCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceE
Confidence 345555442 23222221 11 467888999999999
Q ss_pred EEeCCCeEEEEEcCCCcc-------------cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 448 AADTHHRIRTYNFEHLTD-------------SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~-------------~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
+|+.|.+|++||+.-... ...+.....|.|+.+|||+++++++--|++|++|-+.+-+....+.||.
T Consensus 471 T~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHk 550 (888)
T KOG0306|consen 471 TGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHK 550 (888)
T ss_pred EecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccc
Confidence 999999999999853211 1233447789999999999999999999999999999999999999999
Q ss_pred cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
-+ +.++..+||++.++|||.|.+|+||-+.-|.+-..+-+|...|.+|.|.|. ..++.|||.|+.|+-||-....
T Consensus 551 LP---V~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~-~~~FFt~gKD~kvKqWDg~kFe 625 (888)
T KOG0306|consen 551 LP---VLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPK-THLFFTCGKDGKVKQWDGEKFE 625 (888)
T ss_pred cc---eeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEccc-ceeEEEecCcceEEeechhhhh
Confidence 85 445566899999999999999999999999999999999999999999998 8999999999999999887654
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=232.51 Aligned_cols=287 Identities=17% Similarity=0.213 Sum_probs=234.9
Q ss_pred ccceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.+.+..|.||.+.|.|++=+|.. ..+|+|+.||.|+|||+. ...+..++..|.+.|..|++.. ..++++|.|.
T Consensus 56 kPFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnls----qR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK 129 (433)
T KOG0268|consen 56 KPFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLS----QRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDK 129 (433)
T ss_pred ccchhhccccccccchhhcCcchhhhhhccccCceEEEEehh----hhhhhheeecccCceeeEEecc--cceEEecCCc
Confidence 44566789999999999999987 689999999999999998 6778899999999999999987 6789999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeee--eeeceeEEEEEEcCCCCE-
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLD--SWEGVRVNCLWCRSDGKS- 445 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~--~~~~~~v~~l~~s~~g~~- 445 (604)
+|+.|.++.. ....+. ....+..+.-+..+..++++|. .|.|||.. ...+. .|....+.++.|+|....
T Consensus 130 --tvK~wk~~~~-p~~til--g~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsI 202 (433)
T KOG0268|consen 130 --TVKQWKIDGP-PLHTIL--GKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSI 202 (433)
T ss_pred --ceeeeeccCC-cceeee--ccccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchh
Confidence 8999998763 444443 3456777777777788888875 58899994 44444 444558999999997655
Q ss_pred EEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEeee
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCF 524 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~ 524 (604)
|+++..|+.|.+||++...+...+......+.++|+|..-.++++..|..++.||++.- .++..+.+|.. .+..+.
T Consensus 203 Las~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvs---AV~dVd 279 (433)
T KOG0268|consen 203 LASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVS---AVMDVD 279 (433)
T ss_pred eeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccce---eEEEec
Confidence 55566999999999999988877777788899999998888999999999999999873 45566666655 566677
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
++|.|+-+++||.|.+|+||..+.+.....+.. -...|.||.||.| ..+++|||+|+.|++|.....+.
T Consensus 280 fsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~D-skyi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 280 FSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMD-SKYIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred cCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEecc-ccEEEecCCCcceeeeecchhhh
Confidence 889999999999999999999987765443321 1367999999999 89999999999999998876543
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=233.11 Aligned_cols=231 Identities=17% Similarity=0.321 Sum_probs=200.1
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCC
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQ 424 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~ 424 (604)
...+|+|+.+. +..+++|..|+ +|++||..+..+...+. +|.+.|.|+.|. .+.+++|+.|.+|++||. +|+
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDn--TikiWD~n~~~c~~~L~-GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge 268 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDN--TIKIWDKNSLECLKILT-GHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGE 268 (499)
T ss_pred cCCceEEEEec--chhhhcccccC--ceEEeccccHHHHHhhh-cCCCcEEeeecc--ceEEEecCCCceEEEEeccCCc
Confidence 34679999874 56899999998 89999999988887776 899999999985 569999999999999999 588
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc----cccCCCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN----LLQEDHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
.++.+-+| .|..+.|+ ..++++++.|.+|.+||+....... +.+|...|+.+.|+ .+++++++.|.+|++
T Consensus 269 ~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikv 344 (499)
T KOG0281|consen 269 PLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKV 344 (499)
T ss_pred hhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEE
Confidence 88887776 56667665 5689999999999999998865433 34578889998885 569999999999999
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
|++.+++.++++.+|..++ .++. ..|+++++||.|.+|++||+..|.++..++||+.-|.++.|. ...++||
T Consensus 345 W~~st~efvRtl~gHkRGI---AClQ--Yr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd---~krIVSG 416 (499)
T KOG0281|consen 345 WSTSTCEFVRTLNGHKRGI---ACLQ--YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD---NKRIVSG 416 (499)
T ss_pred Eeccceeeehhhhcccccc---eehh--ccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec---Cceeeec
Confidence 9999999999999998854 3333 578999999999999999999999999999999999999998 5689999
Q ss_pred eCCCcEEEECCCCCCCC
Q psy10566 579 SDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 579 s~Dg~I~iW~~~~~~~~ 595 (604)
+.||+|+|||+..+..+
T Consensus 417 aYDGkikvWdl~aaldp 433 (499)
T KOG0281|consen 417 AYDGKIKVWDLQAALDP 433 (499)
T ss_pred cccceEEEEecccccCC
Confidence 99999999999987654
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=243.59 Aligned_cols=300 Identities=16% Similarity=0.249 Sum_probs=240.7
Q ss_pred cccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEE
Q psy10566 276 VSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW 355 (604)
Q Consensus 276 ~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~ 355 (604)
...+||..- ..++..+.+|.++|..++|+|++.++++||.|-.|+||+.. ..+++.++.||-+-|..+.|
T Consensus 32 ~IQlWDYRM------~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk----~rrclftL~GHlDYVRt~~F 101 (1202)
T KOG0292|consen 32 VIQLWDYRM------GTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK----TRRCLFTLLGHLDYVRTVFF 101 (1202)
T ss_pred eeeeehhhh------hhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc----cceehhhhccccceeEEeec
Confidence 455677543 46778899999999999999999999999999999999998 77889999999999999999
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee---------
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL--------- 426 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------- 426 (604)
++.-.+++++|.|. +|++|+..+++++..+. +|...|.|..|+|....++++|-|.+|++||+.|-..
T Consensus 102 HheyPWIlSASDDQ--TIrIWNwqsr~~iavlt-GHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e 178 (1202)
T KOG0292|consen 102 HHEYPWILSASDDQ--TIRIWNWQSRKCIAVLT-GHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLE 178 (1202)
T ss_pred cCCCceEEEccCCC--eEEEEeccCCceEEEEe-cCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCch
Confidence 99999999999998 99999999999999887 8899999999999999999999999999999853110
Q ss_pred ---------------------eeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---ccccccCCCCeeEEEE
Q psy10566 427 ---------------------DSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT---DSNLLQEDHPVMSFTI 480 (604)
Q Consensus 427 ---------------------~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~---~~~~~~~~~~i~~~~~ 480 (604)
..+.|| .|+-++|+|.-..+++|+.|..|++|.....+ .....+|...|.++-|
T Consensus 179 ~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlf 258 (1202)
T KOG0292|consen 179 DQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLF 258 (1202)
T ss_pred hhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEe
Confidence 112344 58899999999999999999999999987653 3455678999999999
Q ss_pred CCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc---------
Q psy10566 481 DATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP--------- 551 (604)
Q Consensus 481 s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~--------- 551 (604)
+|...++++.+.|++|++||+...+.+++|......... ++..|..+++++|.+.| +.||.++...+
T Consensus 259 hp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~---laahP~lNLfAAgHDsG-m~VFkleRErpa~~v~~n~L 334 (1202)
T KOG0292|consen 259 HPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWI---LAAHPELNLFAAGHDSG-MIVFKLERERPAYAVNGNGL 334 (1202)
T ss_pred cCccceeEecCCCccEEEEecccccceeeeeccCCeEEE---EEecCCcceeeeecCCc-eEEEEEcccCceEEEcCCEE
Confidence 999999999999999999999999999999765553333 44468888888876544 44555442211
Q ss_pred --------------------eEEeeCC---CCCeeEEEEcCCCCcEEEEEeCC-CcEEEECCCCC
Q psy10566 552 --------------------IATLSGH---TRTVSCVAWNPVYHQMIASVSDD-CTVRIWGPHLN 592 (604)
Q Consensus 552 --------------------~~~l~~h---~~~V~~v~~sp~~~~~l~s~s~D-g~I~iW~~~~~ 592 (604)
+..++.. ..++.++.++|..+..+++...| |.--++.+...
T Consensus 335 fYvkd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk~ 399 (1202)
T KOG0292|consen 335 FYVKDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPKD 399 (1202)
T ss_pred EEEccceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecCc
Confidence 1222222 25788999999855555554444 55555655443
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=215.92 Aligned_cols=274 Identities=16% Similarity=0.253 Sum_probs=227.2
Q ss_pred eEEEEECCCeEEEEEeCCCC--------ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 315 KLATGSKDTTVIIWDVDPVT--------FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~--------~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
.|++|++...|.-+++.... .+..+...+..|.++|++++.+ +.++++||.|. +|++||+.+......
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDe--tI~IYDm~k~~qlg~ 78 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDE--TIHIYDMRKRKQLGI 78 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCC--cEEEEeccchhhhcc
Confidence 36778888887777776332 2334467788899999999986 78999999999 899999998887776
Q ss_pred ecCCCCCCeEEEEEecCCC--EEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcC
Q psy10566 387 LNHSPEDSLTSCSWNRDGT--KFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFE 461 (604)
Q Consensus 387 ~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~ 461 (604)
+. .|.+.|+++.|.++-. .|++|+.||.|.+|+.. -..+..+.+| +|+.++++|.++..++.+.|+.++.||+-
T Consensus 79 ll-~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV 157 (362)
T KOG0294|consen 79 LL-SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLV 157 (362)
T ss_pred ee-ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhh
Confidence 66 6789999999999765 99999999999999994 4666677665 69999999999999999999999999999
Q ss_pred CCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE
Q psy10566 462 HLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541 (604)
Q Consensus 462 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I 541 (604)
.++......-....+.+.|+|.|.+++++..++ |-+|.+.+......+..... +.++.+ -++..+++|.+|+.|
T Consensus 158 ~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~~r----~l~~~~-l~~~~L~vG~d~~~i 231 (362)
T KOG0294|consen 158 RGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENPKR----ILCATF-LDGSELLVGGDNEWI 231 (362)
T ss_pred cCccceeeccCCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhcccc----ceeeee-cCCceEEEecCCceE
Confidence 988877777777777799999999998887765 89999988766665554321 222222 577899999999999
Q ss_pred EEEeCCCCcceEEeeCCCCCeeEEEE--cCCCCcEEEEEeCCCcEEEECCCCCCCCCcccc
Q psy10566 542 YIWHVKRELPIATLSGHTRTVSCVAW--NPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLA 600 (604)
Q Consensus 542 ~iwd~~~~~~~~~l~~h~~~V~~v~~--sp~~~~~l~s~s~Dg~I~iW~~~~~~~~~~~~~ 600 (604)
.+||..+..+...+.+|...|-++.+ +|+ +.+|+|+|.||.|+|||++...+..|.+.
T Consensus 232 ~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~-~~~lvTaSSDG~I~vWd~~~~~k~~~~~l 291 (362)
T KOG0294|consen 232 SLKDTDSDTPLTEFLAHENRVKDIASYTNPE-HEYLVTASSDGFIKVWDIDMETKKRPTLL 291 (362)
T ss_pred EEeccCCCccceeeecchhheeeeEEEecCC-ceEEEEeccCceEEEEEccccccCCccee
Confidence 99999999999999999999999984 455 78999999999999999998866655443
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-27 Score=212.92 Aligned_cols=274 Identities=18% Similarity=0.215 Sum_probs=218.0
Q ss_pred cCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE
Q psy10566 299 DHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 299 ~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd 377 (604)
...+.|.+++||| ...+++.||.||+||+|+++.. +... -+....|.++|.+++|+.||..+++++.|+ .+++||
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-g~~~-~ka~~~~~~PvL~v~WsddgskVf~g~~Dk--~~k~wD 100 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-GQLV-PKAQQSHDGPVLDVCWSDDGSKVFSGGCDK--QAKLWD 100 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecC-Cccc-chhhhccCCCeEEEEEccCCceEEeeccCC--ceEEEE
Confidence 3568899999999 4557778999999999999842 1222 255667999999999999999999999999 899999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEecCCC--EEEEEecCCeEEEEEcCC-Ceeeeeec-eeEEEEEEcCCCCEEEEEeCCC
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNRDGT--KFVCGGIRGQFYQCDIEG-QVLDSWEG-VRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~-~~~~~~~~-~~v~~l~~s~~g~~l~~~~~dg 453 (604)
+.+++....- .|..+|.++.|-+... .|++|+.|.+|+.||++. ..+....- .++.++ .--...++++..+.
T Consensus 101 L~S~Q~~~v~--~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~--Dv~~pm~vVata~r 176 (347)
T KOG0647|consen 101 LASGQVSQVA--AHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAA--DVLYPMAVVATAER 176 (347)
T ss_pred ccCCCeeeee--ecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeeh--hccCceeEEEecCC
Confidence 9999655443 5889999999998665 899999999999999964 33333322 133333 33456788899999
Q ss_pred eEEEEEcCCCcccc-c--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC--ceeeEeecccc------ceEEEEe
Q psy10566 454 RIRTYNFEHLTDSN-L--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR--ILLRKFQGVTQ------GQFTIHS 522 (604)
Q Consensus 454 ~I~i~d~~~~~~~~-~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~--~~~~~~~~~~~------~~~~i~~ 522 (604)
.|.+|+++...... . ......+.|+++.++....+.|+-+|.+.+..+..+ +.-.+|+.|.. .++.+..
T Consensus 177 ~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNs 256 (347)
T KOG0647|consen 177 HIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNS 256 (347)
T ss_pred cEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecc
Confidence 99999997654322 1 123567899999999988899999999999998876 44456666653 3788888
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE-eCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV-SDD 581 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~-s~D 581 (604)
+.+.|.-..|++++.||+..+||......+.+.+.|..+|++.+|+.+ +.++|-+ |.|
T Consensus 257 i~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~-G~ifaYA~gYD 315 (347)
T KOG0647|consen 257 IAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRN-GSIFAYALGYD 315 (347)
T ss_pred eEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCC-CCEEEEEeecc
Confidence 888999999999999999999999988889998999999999999999 5665544 444
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=218.03 Aligned_cols=296 Identities=21% Similarity=0.339 Sum_probs=229.2
Q ss_pred CCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC
Q psy10566 288 EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 288 ~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~ 367 (604)
++|-+...+|.... -.||.|++.|.+||+|+.||.|.|||+. +...-+.+.+|..+|++++||+||+.|++++.
T Consensus 12 ~~PEel~~tld~~~--a~~~~Fs~~G~~lAvGc~nG~vvI~D~~----T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~ 85 (405)
T KOG1273|consen 12 EYPEELTHTLDNPL--AECCQFSRWGDYLAVGCANGRVVIYDFD----TFRIARMLSAHVRPITSLCWSRDGRKLLTSSR 85 (405)
T ss_pred cChHhhceeccCCc--cceEEeccCcceeeeeccCCcEEEEEcc----ccchhhhhhccccceeEEEecCCCCEeeeecC
Confidence 67777777776333 8899999999999999999999999998 66677889999999999999999999999999
Q ss_pred CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCeeeeeec-------eeEEEEEE
Q psy10566 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQVLDSWEG-------VRVNCLWC 439 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~v~~l~~ 439 (604)
|. .|.+||+..|.+...+. ..++|+.+.|+|.. +.+++.-.+..-.+.++....-..+.. ....+..|
T Consensus 86 D~--si~lwDl~~gs~l~rir--f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~f 161 (405)
T KOG1273|consen 86 DW--SIKLWDLLKGSPLKRIR--FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVF 161 (405)
T ss_pred Cc--eeEEEeccCCCceeEEE--ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccc
Confidence 99 89999999999888887 56889999999943 344444334434444443211111111 12334468
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecCCeEEEEecCC-------C--ceee
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQGVHLWDLRD-------R--ILLR 508 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-------~--~~~~ 508 (604)
.+.|+++++|...|.+.+||..+.++...... ...|..+.++..|++++..+.|..|+.|+++. + ++.+
T Consensus 162 dr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~ 241 (405)
T KOG1273|consen 162 DRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEH 241 (405)
T ss_pred cCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhH
Confidence 89999999999999999999999877655442 36788999999999999999999999999873 1 1223
Q ss_pred EeeccccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCC-CCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 509 KFQGVTQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRELPIATLSGHT-RTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 509 ~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~-~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
+++..-+.... ..|.++.+|.|++.|+. ...++||....|.+++.+.|.. .....|.|+|- ...+++- ..|.|+|
T Consensus 242 K~qDvVNk~~W-k~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~-rp~i~si-~sg~v~i 318 (405)
T KOG1273|consen 242 KLQDVVNKLQW-KKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPV-RPIIASI-ASGVVYI 318 (405)
T ss_pred HHHHHHhhhhh-hheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccc-eeeeeec-cCCceEE
Confidence 33322222222 23445679999988875 5689999999999999999887 56788999998 6777777 7899999
Q ss_pred ECCCCCCCCC
Q psy10566 587 WGPHLNTNKS 596 (604)
Q Consensus 587 W~~~~~~~~~ 596 (604)
|......+..
T Consensus 319 w~~~~~enws 328 (405)
T KOG1273|consen 319 WAVVQVENWS 328 (405)
T ss_pred EEeecccchh
Confidence 9987766543
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=215.75 Aligned_cols=292 Identities=17% Similarity=0.210 Sum_probs=219.9
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+.+|+||.+.|++++||.||++|||++.|++|+||++++ ...+..+.+.. .-+..+.++|+||-+.++.....+ .
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~D--F~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g-~ 155 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRD--FENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRG-N 155 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecch--hhhhhhhHhhccccCCCceEEEECCCcceEEEEEccC-C
Confidence 457999999999999999999999999999999999983 22111111111 123467899999998887776666 3
Q ss_pred EEEEEECCC---ceEEE--------EecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEE
Q psy10566 372 ELWVWNIET---ELLRV--------KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLW 438 (604)
Q Consensus 372 ~i~vwd~~~---~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~ 438 (604)
++++|.+.. |.... .+...|...+..+-...++.++++++.|..|.+|++.|+.+...... .-...+
T Consensus 156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aa 235 (420)
T KOG2096|consen 156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAA 235 (420)
T ss_pred EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeecccccccccee
Confidence 899997643 22111 12233455666677777889999999999999999999999888764 466789
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCC---------cccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC------
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHL---------TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD------ 503 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~---------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~------ 503 (604)
++|+|+++++++..-.|++|..--. +...+.+|...|..++|+++...+++.+.||++++||+.-
T Consensus 236 vSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~q 315 (420)
T KOG2096|consen 236 VSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQ 315 (420)
T ss_pred eCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCC
Confidence 9999999999999999999986322 2233456889999999999999999999999999999852
Q ss_pred -CceeeEee--ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee-CCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 504 -RILLRKFQ--GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS-GHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 504 -~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
.+.++... -+..+...++ +..+|+|+.||.. ....+++|..++|+...++. .|...|.+++|+++ +.+++|||
T Consensus 316 Dpk~Lk~g~~pl~aag~~p~R-L~lsP~g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~-g~~~atcG 392 (420)
T KOG2096|consen 316 DPKILKEGSAPLHAAGSEPVR-LELSPSGDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISYSSD-GKYIATCG 392 (420)
T ss_pred CchHhhcCCcchhhcCCCceE-EEeCCCCcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEecCC-CcEEeeec
Confidence 12223221 1222222333 3446999888766 45679999999998877775 58999999999999 89999998
Q ss_pred CCCcEEEECCCCC
Q psy10566 580 DDCTVRIWGPHLN 592 (604)
Q Consensus 580 ~Dg~I~iW~~~~~ 592 (604)
|..+++..-..+
T Consensus 393 -dr~vrv~~ntpg 404 (420)
T KOG2096|consen 393 -DRYVRVIRNTPG 404 (420)
T ss_pred -ceeeeeecCCCc
Confidence 678888764433
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-27 Score=229.27 Aligned_cols=246 Identities=25% Similarity=0.392 Sum_probs=213.2
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
..+.+|..+|.+++|+|+++++++++.++ .+++|++.++....... .|...+..+.|+|+++.+++++.+|.|++||
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g--~i~i~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~ 79 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDG--TIKVWDLETGELLRTLK-GHTGPVRDVAASADGTYLASGSSDKTIRLWD 79 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCc--EEEEEEeeCCCcEEEEe-cCCcceeEEEECCCCCEEEEEcCCCeEEEEE
Confidence 45678999999999999999999999888 89999999887666554 5677889999999999999999999999999
Q ss_pred cCC-Ceeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 421 IEG-QVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 421 ~~~-~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
+.. +.+..+..+ .+.++.++++++.+++++.++.|.+||+.+......+. +...+.++.++|++.++++++.++.|
T Consensus 80 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 159 (289)
T cd00200 80 LETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTI 159 (289)
T ss_pred cCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcE
Confidence 964 566666655 59999999998888888889999999998665544444 67789999999999999888889999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEE
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
++||+++++.+..+..+.. .+..+.++++++.+++++.||.|++||+.+++.+..+..|...|.+++|+|+ +.+++
T Consensus 160 ~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~ 235 (289)
T cd00200 160 KLWDLRTGKCVATLTGHTG---EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPD-GYLLA 235 (289)
T ss_pred EEEEccccccceeEecCcc---ccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCC-CcEEE
Confidence 9999999888888887765 3444556789989999999999999999999999999889999999999999 88999
Q ss_pred EEeCCCcEEEECCCCCC
Q psy10566 577 SVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~~~ 593 (604)
+++.||.|++|++.++.
T Consensus 236 ~~~~~~~i~i~~~~~~~ 252 (289)
T cd00200 236 SGSEDGTIRVWDLRTGE 252 (289)
T ss_pred EEcCCCcEEEEEcCCce
Confidence 98889999999998654
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-27 Score=242.97 Aligned_cols=275 Identities=23% Similarity=0.320 Sum_probs=239.9
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE-eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT-LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~-l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
|...+.+..|. +.++++++.|++|++|+.. ....+.. +.||.+.|.++++..-+.++++|+.|. ++++||.
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~----~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~--t~rvWd~ 278 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLN----NGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDK--TERVWDC 278 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecc----cceEEEeeccCCCCCceeEEEecCCCEEEEEecCC--cEEeEec
Confidence 56688888888 5589999999999999987 5556666 999999999999988888999999999 8999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
.+|.+...+. +|.+.|.++... ...+++|+.|.+|++|+++ +..+..+.+| .|.++.+. +..+++|+.|++|
T Consensus 279 ~sg~C~~~l~-gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v 353 (537)
T KOG0274|consen 279 STGECTHSLQ-GHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTV 353 (537)
T ss_pred CCCcEEEEec-CCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceE
Confidence 9999999998 788888887764 4578889999999999995 7888877766 78888887 8899999999999
Q ss_pred EEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCCCCcEEE
Q psy10566 456 RTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGANQDFVA 533 (604)
Q Consensus 456 ~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 533 (604)
++||..+.+....+ .|...|.++.+.+. ..+++|+.|++|++||+++. +++.++.+|..-+..+ ...+++++
T Consensus 354 ~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l-----~~~~~~Lv 427 (537)
T KOG0274|consen 354 KVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSL-----LLRDNFLV 427 (537)
T ss_pred EEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccc-----ccccceeE
Confidence 99999988776655 47899999988766 89999999999999999999 9999999998865333 24678999
Q ss_pred EEeCCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCCC
Q psy10566 534 SGSEDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKS 596 (604)
Q Consensus 534 sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~~ 596 (604)
+++.||+|++||..+++++.++.+ |.+.|.++++. ...+++++.||++++||++++....
T Consensus 428 s~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~---~~~il~s~~~~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 428 SSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG---KEEILCSSDDGSVKLWDLRSGTLIR 488 (537)
T ss_pred eccccccEEEeecccCceeeeeccCCcccEEEeecC---cceEEEEecCCeeEEEecccCchhh
Confidence 999999999999999999999999 67899999887 3568889999999999999987544
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-26 Score=260.61 Aligned_cols=258 Identities=15% Similarity=0.234 Sum_probs=211.8
Q ss_pred CCeEEEEEeCCCCceeEeeE-----EeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce--------EEEEec
Q psy10566 322 DTTVIIWDVDPVTFTCQHRK-----TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL--------LRVKLN 388 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~-----~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~--------~~~~~~ 388 (604)
+|.+++|+.. ...... .+..|...|.+++|+|+++++++++.|+ .|++||..+.. ....+
T Consensus 457 ~gl~~~~~~~----~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~--~I~iwd~~~~~~~~~~~~~~~~~~- 529 (793)
T PLN00181 457 EGLCKYLSFS----KLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNK--KIKIFECESIIKDGRDIHYPVVEL- 529 (793)
T ss_pred hhhhhhhccc----ceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCC--EEEEEECCcccccccccccceEEe-
Confidence 6788899887 222222 2445899999999999999999999998 89999975421 11222
Q ss_pred CCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC
Q psy10566 389 HSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRS-DGKSVLAADTHHRIRTYNFEHL 463 (604)
Q Consensus 389 ~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~ 463 (604)
.+...+.+++|++ ++.++++++.||+|++||+. ++.+..+.+| .|.+++|+| ++..+++++.|+.|++||+++.
T Consensus 530 -~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~ 608 (793)
T PLN00181 530 -ASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 608 (793)
T ss_pred -cccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC
Confidence 2346789999987 57899999999999999995 6677777666 699999996 7899999999999999999987
Q ss_pred cccccccCCCCeeEEEEC-CCCCEEEEEecCCeEEEEecCCCc-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE
Q psy10566 464 TDSNLLQEDHPVMSFTID-ATDRLALLNVSTQGVHLWDLRDRI-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541 (604)
Q Consensus 464 ~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~I~lwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I 541 (604)
.....+.....+.++.|+ +++.++++|+.||.|++||+++.. .+..+.+|...+..+. + .++.++++++.|++|
T Consensus 609 ~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~---f-~~~~~lvs~s~D~~i 684 (793)
T PLN00181 609 VSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVR---F-VDSSTLVSSSTDNTL 684 (793)
T ss_pred cEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEE---E-eCCCEEEEEECCCEE
Confidence 766666666788999994 579999999999999999998865 5667778887655543 3 367899999999999
Q ss_pred EEEeCCC------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 542 YIWHVKR------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 542 ~iwd~~~------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++||+.. +.++.++.+|...+++++|+|+ +.+|++|+.||.|++|+....
T Consensus 685 kiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~-~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 685 KLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVS-DGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred EEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCC-CCEEEEEeCCCEEEEEECCCC
Confidence 9999974 3678899999999999999999 789999999999999997654
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=248.55 Aligned_cols=290 Identities=16% Similarity=0.245 Sum_probs=234.8
Q ss_pred CCCcEEEEEEcCCCCeEEEEE--CCCeEEEEEeCCCC--------ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGS--KDTTVIIWDVDPVT--------FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs--~dg~i~iwd~~~~~--------~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+...|.+++.+|||..+|||+ .||.++||+.++-. .....+.+...|.+.|+|+.|+|||++|++|+.|.
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 345799999999999999999 99999999976211 12345667778999999999999999999999998
Q ss_pred ceEEEEEECCC------------------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeee
Q psy10566 370 CHELWVWNIET------------------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWE 430 (604)
Q Consensus 370 ~~~i~vwd~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~ 430 (604)
.|.+|+... .+....+. +|...|..++|+|++.++++++.|++|.+|+. ..+.++.+.
T Consensus 92 --~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~-~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~ 168 (942)
T KOG0973|consen 92 --LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILR-GHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLR 168 (942)
T ss_pred --eEEEeeecccCCcccccccccccccceeeEEEEEe-cCCCccceeccCCCccEEEEecccceEEEEccccceeeeeee
Confidence 899998772 11333443 78999999999999999999999999999998 568888888
Q ss_pred ce--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEec----CCeEE
Q psy10566 431 GV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVS----TQGVH 497 (604)
Q Consensus 431 ~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~----dg~I~ 497 (604)
+| .|..+.|.|-|+++++-+.|++|++|++.+......+. ....+..+.|+|||.+|++... ..++.
T Consensus 169 ~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~ 248 (942)
T KOG0973|consen 169 GHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIA 248 (942)
T ss_pred cccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeE
Confidence 88 69999999999999999999999999976643333332 2445788999999999998654 34588
Q ss_pred EEecCCCceeeEeeccccceEEEEee---eCCCC-------C----cEEEEEeCCCcEEEEeCCCCcceEEeeC-CCCCe
Q psy10566 498 LWDLRDRILLRKFQGVTQGQFTIHSC---FGGAN-------Q----DFVASGSEDGKVYIWHVKRELPIATLSG-HTRTV 562 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~~~~i~~~---~~~~~-------~----~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V 562 (604)
|.+-.+.+.-..+.||..+...+++. +-.+. . ..+|+||.|++|.||.....+++..... ....|
T Consensus 249 IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI 328 (942)
T KOG0973|consen 249 IIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSI 328 (942)
T ss_pred EEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCce
Confidence 98888888888899999876655431 10111 1 1789999999999999988888766542 35789
Q ss_pred eEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 563 SCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 563 ~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+++|+|| +..|+.||.||+|.+..+...+
T Consensus 329 ~DmsWspd-G~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 329 VDMSWSPD-GFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred eeeeEcCC-CCeEEEEecCCeEEEEEcchHH
Confidence 99999999 8899999999999999987654
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=209.19 Aligned_cols=278 Identities=17% Similarity=0.252 Sum_probs=217.2
Q ss_pred EEEEEcCC-CCeEEEE-------ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEE
Q psy10566 305 WFCKFSPD-GLKLATG-------SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWV 375 (604)
Q Consensus 305 ~~v~fspd-g~~lasg-------s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~v 375 (604)
.++.|||- ..+||.+ ...|++.|-++....+ ......+. -.+.+..++|+++. +.+++++.|| ++++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~g-i~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~GDG--SLrl 87 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKG-IQECQSYD-TEDGLFDVAWSENHENQVIAASGDG--SLRL 87 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCC-eEEEEeee-cccceeEeeecCCCcceEEEEecCc--eEEE
Confidence 56788882 2234333 2468899999863222 22333333 46789999999975 5677888888 8999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcC-CCCEEEEEe
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRS-DGKSVLAAD 450 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~-~g~~l~~~~ 450 (604)
||...........+.|...|.++.|++ +...+++++.|++|++|+. .++.+.++.+| .|....|+| .++.+++++
T Consensus 88 ~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~S 167 (311)
T KOG0277|consen 88 FDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASAS 167 (311)
T ss_pred eccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEcc
Confidence 997655433333447899999999999 6678889999999999999 57888889887 688999999 578899999
Q ss_pred CCCeEEEEEcCCC-cccccccCCCCeeEEEECCC-CCEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCC
Q psy10566 451 THHRIRTYNFEHL-TDSNLLQEDHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 451 ~dg~I~i~d~~~~-~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
.|+.+++||++.. +...+..|...+.++.|+.- ...+++|+.|+.|+.||+++- .++..+.+|.- .|+.+.++|
T Consensus 168 gd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~---AVRkvk~Sp 244 (311)
T KOG0277|consen 168 GDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGL---AVRKVKFSP 244 (311)
T ss_pred CCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCce---EEEEEecCc
Confidence 9999999999875 33445557789999999875 467888999999999999974 45667777765 444444455
Q ss_pred C-CcEEEEEeCCCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 528 N-QDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 528 ~-~~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
. ..+|++++.|-+++|||... ...+.+...|+.-|..+.|++..+.++|+++.|+.++||++
T Consensus 245 h~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 245 HHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred chhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 4 56899999999999999984 44566777899999999999987899999999999999986
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-25 Score=195.42 Aligned_cols=293 Identities=19% Similarity=0.288 Sum_probs=229.0
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC----------C-ceeEeeEEeccCCCCeeEEEECCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV----------T-FTCQHRKTLEGHTLGVAYLAWSPD 358 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~----------~-~~~~~~~~l~~h~~~V~~l~~spd 358 (604)
.+.++.+|+ .+..|.+++|.|.|.+.|+|+...+.+|-....- . ......+.-+.|.+.|+|.+|+|+
T Consensus 22 ~f~~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 22 HFEAINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred ceEEEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 355666665 4578999999999999999999999998765310 0 011223344568999999999999
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEE-----EEecCCCCCCeEEEEEecC----CCEEEEEe-cCCeEEEEEc-CCCeee
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLR-----VKLNHSPEDSLTSCSWNRD----GTKFVCGG-IRGQFYQCDI-EGQVLD 427 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~-----~~~~~~~~~~v~~~~~~~~----~~~l~s~~-~dg~i~iwd~-~~~~~~ 427 (604)
|+.+++++.|. +|++...+...+. ..+. -|.+.|..++|..+ +..+++++ .|..|++-|. .|+.+.
T Consensus 101 geliatgsndk--~ik~l~fn~dt~~~~g~dle~n-mhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~ 177 (350)
T KOG0641|consen 101 GELIATGSNDK--TIKVLPFNADTCNATGHDLEFN-MHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFH 177 (350)
T ss_pred cCeEEecCCCc--eEEEEecccccccccCcceeee-ecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcce
Confidence 99999999999 6766554433221 2222 47889999999753 34566654 3567777777 688888
Q ss_pred eeeceeEEEEE-EcCCCCEEEEEeCCCeEEEEEcCCCcccccccC--------CCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 428 SWEGVRVNCLW-CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE--------DHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 428 ~~~~~~v~~l~-~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
.+.+|.-.-++ ++-+|-.+++|+.|.+|++||++.......+.. ...|.++++.|.|+++++|..|....+
T Consensus 178 a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~l 257 (350)
T KOG0641|consen 178 ALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCML 257 (350)
T ss_pred eecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEE
Confidence 88887433332 455788899999999999999998776665542 367999999999999999999999999
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC----CcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR----ELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~----~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
||++.++.++.|..|... |+++.++|...|+.+++.|..|++-|+.. .-++.....|...+..+.|+|. ..-
T Consensus 258 ydirg~r~iq~f~phsad---ir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~-d~s 333 (350)
T KOG0641|consen 258 YDIRGGRMIQRFHPHSAD---IRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQ-DFS 333 (350)
T ss_pred EEeeCCceeeeeCCCccc---eeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCc-cce
Confidence 999999999999999884 55566789999999999999999999873 2345556679999999999999 788
Q ss_pred EEEEeCCCcEEEECCC
Q psy10566 575 IASVSDDCTVRIWGPH 590 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~ 590 (604)
+++.+.|.++.+|-++
T Consensus 334 fisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 334 FISSSADKTATLWALN 349 (350)
T ss_pred eeeccCcceEEEeccC
Confidence 8999999999999875
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-26 Score=208.88 Aligned_cols=266 Identities=17% Similarity=0.257 Sum_probs=219.2
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC--eEEEEe
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS--HLLVVG 366 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~--~l~s~~ 366 (604)
+...+...+..|.++|++++.+ |.++|+||.|-+|+|||+. +......+-.|.+.|+++.|.++-. .|++|+
T Consensus 31 ~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~----k~~qlg~ll~HagsitaL~F~~~~S~shLlS~s 104 (362)
T KOG0294|consen 31 PTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMR----KRKQLGILLSHAGSITALKFYPPLSKSHLLSGS 104 (362)
T ss_pred eeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEecc----chhhhcceeccccceEEEEecCCcchhheeeec
Confidence 3455677788999999999987 8899999999999999998 6667788888999999999999876 899999
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeee-ceeEEEEEEcCCCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWE-GVRVNCLWCRSDGK 444 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~-~~~v~~l~~s~~g~ 444 (604)
.|| .|.+|+.....+...+. +|.+.|+.++.+|.++..++.+.|+.++.||+ +|+.-.... .+....+.|+|.|.
T Consensus 105 dDG--~i~iw~~~~W~~~~slK-~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd 181 (362)
T KOG0294|consen 105 DDG--HIIIWRVGSWELLKSLK-AHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGD 181 (362)
T ss_pred CCC--cEEEEEcCCeEEeeeec-ccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCC
Confidence 998 89999999998888776 78888999999999999999999999999999 555433322 22345589999999
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~ 524 (604)
+++.+..+ .|-+|.+........+.....+.++.|. ++..+++|..|+.|.+||..+..+...+.+|...+..+....
T Consensus 182 ~F~v~~~~-~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~ 259 (362)
T KOG0294|consen 182 HFVVSGRN-KIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYT 259 (362)
T ss_pred EEEEEecc-EEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEe
Confidence 88887765 6889998887666666555667777776 667899999999999999999999999999999887776444
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCC-----cceEEeeCCCCCeeEEEE
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKRE-----LPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~~-----~~~~~l~~h~~~V~~v~~ 567 (604)
.|++.+|+++|.||.|+|||++.. +++..+.. ...++|+..
T Consensus 260 -~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 260 -NPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred -cCCceEEEEeccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 478899999999999999999865 34444443 445566554
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=232.70 Aligned_cols=261 Identities=16% Similarity=0.219 Sum_probs=217.5
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.++|....+|+... -..+++++.||..+|.+++|+++|..|.|+|.|+.|++||++ ++++...+. -...
T Consensus 232 S~gmD~~vklW~vy~-----~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtE----TG~~~~~f~-~~~~ 301 (503)
T KOG0282|consen 232 SGGMDGLVKLWNVYD-----DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTE----TGQVLSRFH-LDKV 301 (503)
T ss_pred ecCCCceEEEEEEec-----CcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccc----cceEEEEEe-cCCC
Confidence 455677777777543 257899999999999999999999999999999999999999 666666665 3457
Q ss_pred eeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC----C
Q psy10566 350 VAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG----Q 424 (604)
Q Consensus 350 V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~ 424 (604)
++|+.|+|++ +.+++|+.|+ .|+.||+++++.+..+. .|-+.|..+.|-++|+++++++.|+++++|+..- +
T Consensus 302 ~~cvkf~pd~~n~fl~G~sd~--ki~~wDiRs~kvvqeYd-~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik 378 (503)
T KOG0282|consen 302 PTCVKFHPDNQNIFLVGGSDK--KIRQWDIRSGKVVQEYD-RHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIK 378 (503)
T ss_pred ceeeecCCCCCcEEEEecCCC--cEEEEeccchHHHHHHH-hhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccch
Confidence 8999999999 7788888888 89999999999877776 6778899999999999999999999999999853 2
Q ss_pred eeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----ccccccC--CCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 425 VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT----DSNLLQE--DHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 425 ~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~----~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
.+.....|...++..+|+++++++-+.|..|.+|.+...- .....+| .+.-..+.|||||.+|++|..+|.+.+
T Consensus 379 ~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~ 458 (503)
T KOG0282|consen 379 NIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNF 458 (503)
T ss_pred hhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEE
Confidence 2333344678899999999999999999999999975431 2222233 455678999999999999999999999
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
||.++-+.+.+++.|.+. ++...+.+.....+|+++.||.|++||
T Consensus 459 wdwkt~kl~~~lkah~~~--ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 459 WDWKTTKLVSKLKAHDQP--CIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eechhhhhhhccccCCcc--eEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999999765 344455555567899999999999996
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=221.75 Aligned_cols=293 Identities=18% Similarity=0.231 Sum_probs=238.5
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce-------------eEeeEEe-ccCCCCeeEEEECCCC
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT-------------CQHRKTL-EGHTLGVAYLAWSPDS 359 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~-------------~~~~~~l-~~h~~~V~~l~~spd~ 359 (604)
...+..|.-+|.||+++||+++.++++.||+|.=|++..+... +.....- ++|...|.+++.|+||
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 3567789999999999999999999999999999998733211 0011111 3788999999999999
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEE
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNC 436 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~ 436 (604)
+||++++.|. .|.||+.++.+.+..+. +|.+.|.+++|-.....+++++.|+.|++|+++ -..+.++.+| .|..
T Consensus 215 kylatgg~d~--~v~Iw~~~t~ehv~~~~-ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~ 291 (479)
T KOG0299|consen 215 KYLATGGRDR--HVQIWDCDTLEHVKVFK-GHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLG 291 (479)
T ss_pred cEEEecCCCc--eEEEecCcccchhhccc-ccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceee
Confidence 9999999998 89999999999888866 799999999999999999999999999999995 4566667676 4788
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc--
Q psy10566 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT-- 514 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~-- 514 (604)
+....-++.+.+|+.|+++++|++..........+...+.|++|- +..++++|+.+|.|.+|++.+.+++.+.....
T Consensus 292 IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv 370 (479)
T KOG0299|consen 292 IDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGV 370 (479)
T ss_pred echhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecccCceeEeeccccc
Confidence 888888888888889999999999766666667778889999997 45678999999999999999988887665211
Q ss_pred -------cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC----cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 515 -------QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE----LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 515 -------~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~----~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
+..+.+.+++.-|..+++++||.+|.|++|-+..+ .++..+. -.+.|++++|++++..+++..+....
T Consensus 371 ~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhR 449 (479)
T KOG0299|consen 371 IPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHR 449 (479)
T ss_pred cCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEecccccc
Confidence 11235666676789999999999999999999877 4455555 56899999999995557777777776
Q ss_pred EEEECCCC
Q psy10566 584 VRIWGPHL 591 (604)
Q Consensus 584 I~iW~~~~ 591 (604)
+--|-...
T Consensus 450 lGRW~~~k 457 (479)
T KOG0299|consen 450 LGRWWCLK 457 (479)
T ss_pred cceeeEee
Confidence 65565443
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=213.51 Aligned_cols=252 Identities=18% Similarity=0.239 Sum_probs=221.6
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
...-+.++.||++.||+...+.+...-|+++.|-+.+|||.- ++..+..+. |..-|.+++|+.|.++|++++.+.
T Consensus 48 tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~----tgdelhsf~-hkhivk~~af~~ds~~lltgg~ek 122 (334)
T KOG0278|consen 48 TGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAV----TGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEK 122 (334)
T ss_pred CCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhh----hhhhhhhhh-hhheeeeEEecccchhhhccchHH
Confidence 355678999999999999999999999999999999999987 666677776 888999999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeec-eeEEEEEEcCCCCEEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEG-VRVNCLWCRSDGKSVL 447 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~-~~v~~l~~s~~g~~l~ 447 (604)
.+++||++..+....-..+|.+.|..+.|....+.|++++.|++|++||. .+..++.+.- ++|+++.++++|.++.
T Consensus 123 --llrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilT 200 (334)
T KOG0278|consen 123 --LLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILT 200 (334)
T ss_pred --HhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEE
Confidence 89999999877655555689999999999999999999999999999999 5777777654 5899999999999655
Q ss_pred EEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEe-eccccceEEEEeeeCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKF-QGVTQGQFTIHSCFGG 526 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~-~~~~~~~~~i~~~~~~ 526 (604)
+ ...+.|.+||..+............|.+..++|+...+++|+.|..++.||..+++.+..+ ++|.+. +.++.++
T Consensus 201 i-a~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gp---VhcVrFS 276 (334)
T KOG0278|consen 201 I-AYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGP---VHCVRFS 276 (334)
T ss_pred E-ecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCc---eEEEEEC
Confidence 4 5567899999999888888888889999999999999999999999999999999998886 788774 5556668
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 527 ANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 527 ~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
|+|...++||+||+|++|-+..++..
T Consensus 277 PdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 277 PDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred CCCceeeccCCCceEEEEEecCCCch
Confidence 99999999999999999998866544
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-26 Score=218.23 Aligned_cols=280 Identities=17% Similarity=0.175 Sum_probs=226.2
Q ss_pred CCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 301 CDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 301 ~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
.+.|.+++|||... -+|+.+ .-.+.||+.. .....+++......|++++|..||+.+++|...| .|++||..
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~----~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG--~V~vfD~k 98 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSV----TRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESG--HVKVFDMK 98 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecc----hhhhhhhHHhhccceeEEEeecCCeEEEccCCcC--cEEEeccc
Confidence 46899999999654 355444 4579999977 5666677777788999999999999998888877 89999966
Q ss_pred CceEEEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCeee-eeece--eEEEEEEcCC-CCEEEEEeCCCe
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQVLD-SWEGV--RVNCLWCRSD-GKSVLAADTHHR 454 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~--~v~~l~~s~~-g~~l~~~~~dg~ 454 (604)
+...+..+ ..|..+|..+.|+|. +..+++|+.|+.+++||+++..+. .+.+| -|.|.+++|. +..+++|+.||.
T Consensus 99 ~r~iLR~~-~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 99 SRVILRQL-YAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred cHHHHHHH-hhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 64444444 478999999999994 567778888899999999766653 55666 6999999996 558999999999
Q ss_pred EEEEEcCCC-cccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 455 IRTYNFEHL-TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 455 I~i~d~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
|++||.+.. .....+.|+.+|.++.+-|.|..+++++. +.|++||+.+| +.+..+..|...++ |+....++..|
T Consensus 178 vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVT---cL~l~s~~~rL 253 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVT---CLRLASDSTRL 253 (487)
T ss_pred EEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEE---EEEeecCCceE
Confidence 999999987 66677889999999999999998888764 56999999855 44555555766444 44445688999
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
++|+-|+.|++||+.+.+.+..+. -.++|.+++.+|+ +..++.|-.||.+.+=+...+++
T Consensus 254 lS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~d-d~t~viGmsnGlv~~rr~~~k~k 313 (487)
T KOG0310|consen 254 LSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPD-DQTVVIGMSNGLVSIRRREVKKK 313 (487)
T ss_pred eecccccceEEEEccceEEEEeee-cccceeeEEecCC-CceEEEecccceeeeehhhcccC
Confidence 999999999999999999888876 5689999999998 78999999999988775555443
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-25 Score=201.55 Aligned_cols=268 Identities=14% Similarity=0.207 Sum_probs=218.1
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
..+.|.++.|+|.+..|+.+++||++++|++. .......+. |..++.+++|.++ ..+++++.|+ .|+.+|+.
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~----~~~l~~~~~-~~~plL~c~F~d~-~~~~~G~~dg--~vr~~Dln 83 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVP----ANSLKLKFK-HGAPLLDCAFADE-STIVTGGLDG--QVRRYDLN 83 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEecc----chhhhhhee-cCCceeeeeccCC-ceEEEeccCc--eEEEEEec
Confidence 35789999999999999999999999999998 323333333 8999999999984 5788999998 89999999
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee-eeeec-eeEEEEEEcCCCCEEEEEeCCCeEEE
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL-DSWEG-VRVNCLWCRSDGKSVLAADTHHRIRT 457 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i 457 (604)
++.....- .|..+|.|+.+++....+++|+.|++|++||...+.. ..+.. .+|.++ +-.|+.|++|+.+..+.+
T Consensus 84 ~~~~~~ig--th~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~--~v~g~~LvVg~~~r~v~i 159 (323)
T KOG1036|consen 84 TGNEDQIG--THDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCM--DVSGNRLVVGTSDRKVLI 159 (323)
T ss_pred CCcceeec--cCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEE--eccCCEEEEeecCceEEE
Confidence 98765443 5889999999999999999999999999999975322 22222 245554 445788999999999999
Q ss_pred EEcCCCccccc---ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC----ceeeEeeccc------cceEEEEeee
Q psy10566 458 YNFEHLTDSNL---LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR----ILLRKFQGVT------QGQFTIHSCF 524 (604)
Q Consensus 458 ~d~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~----~~~~~~~~~~------~~~~~i~~~~ 524 (604)
||++....... ...+..+.++++.|++.-.++++-||.|.+=.+... .....|+.|. .-.+++..+.
T Consensus 160 yDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~ 239 (323)
T KOG1036|consen 160 YDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIA 239 (323)
T ss_pred EEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeE
Confidence 99998765442 223668999999999999999999999888766654 3334555554 3467888899
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
++|-...+|||+.||.|.+||..+.+.+..+......|.+++|+.+ +..||.++.
T Consensus 240 Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~d-G~~LAia~s 294 (323)
T KOG1036|consen 240 FHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMD-GSLLAIASS 294 (323)
T ss_pred eccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccC-CCeEEEEec
Confidence 9999899999999999999999999999999888888999999999 788888864
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-25 Score=223.52 Aligned_cols=272 Identities=18% Similarity=0.284 Sum_probs=223.3
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
+.|+. ...||.|. ...|++|+.. ++....+..+ +...|+++.|+++|.+|++|..+| .|.+||..+.+.+..
T Consensus 183 ldWss-~n~laVal-g~~vylW~~~--s~~v~~l~~~--~~~~vtSv~ws~~G~~LavG~~~g--~v~iwD~~~~k~~~~ 254 (484)
T KOG0305|consen 183 LDWSS-ANVLAVAL-GQSVYLWSAS--SGSVTELCSF--GEELVTSVKWSPDGSHLAVGTSDG--TVQIWDVKEQKKTRT 254 (484)
T ss_pred hhccc-CCeEEEEe-cceEEEEecC--CCceEEeEec--CCCceEEEEECCCCCEEEEeecCC--eEEEEehhhcccccc
Confidence 67883 44677764 5689999987 3332333333 478999999999999999999998 899999999998888
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-C-Ceeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC
Q psy10566 387 LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-G-QVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEH 462 (604)
Q Consensus 387 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~-~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~ 462 (604)
+...|...|.+++|. +..+.+|+.++.|..+|+. . .....+.+| .|..+.|++|++++++|+.|+.+.|||...
T Consensus 255 ~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~ 332 (484)
T KOG0305|consen 255 LRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS 332 (484)
T ss_pred ccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCC
Confidence 886689999999998 7789999999999999994 2 222224444 799999999999999999999999999955
Q ss_pred Cc-ccccccCCCCeeEEEECCCC-CEEEEEe--cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE--e
Q psy10566 463 LT-DSNLLQEDHPVMSFTIDATD-RLALLNV--STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG--S 536 (604)
Q Consensus 463 ~~-~~~~~~~~~~i~~~~~s~~~-~~l~~~~--~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg--s 536 (604)
.. ...+..|...|..++|+|-. ..||+|+ .|+.|++||..++..+..+.... .|..+.|++..+-|+++ .
T Consensus 333 ~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgs----QVcsL~Wsk~~kEi~sthG~ 408 (484)
T KOG0305|consen 333 PEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGS----QVCSLIWSKKYKELLSTHGY 408 (484)
T ss_pred ccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCC----ceeeEEEcCCCCEEEEecCC
Confidence 44 45566789999999999965 5566654 58999999999999988776554 35566667777655554 3
Q ss_pred CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 537 EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 537 ~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.++.|.||+..+.+++..+.+|...|..++++|| +..+++|+.|.++++|++-...
T Consensus 409 s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPd-g~~i~t~a~DETlrfw~~f~~~ 464 (484)
T KOG0305|consen 409 SENQITLWKYPSMKLVAELLGHTSRVLYLALSPD-GETIVTGAADETLRFWNLFDER 464 (484)
T ss_pred CCCcEEEEeccccceeeeecCCcceeEEEEECCC-CCEEEEecccCcEEeccccCCC
Confidence 4778999999999999999999999999999999 8999999999999999997753
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-25 Score=227.01 Aligned_cols=266 Identities=14% Similarity=0.136 Sum_probs=201.1
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCc------ee---EeeEEeccCCCCeeEEEECC-CCCeEEEEeCCC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF------TC---QHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPED 369 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~------~~---~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~ 369 (604)
|-..|.....++|+..+++++.+..+..|+...+.. .+ .....+.+|.+.|.+++|+| ++.+|++++.|+
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 345566677778877777787777777887641110 00 01124678999999999999 888999999998
Q ss_pred ceEEEEEECCCce-------EEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEE
Q psy10566 370 CHELWVWNIETEL-------LRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLW 438 (604)
Q Consensus 370 ~~~i~vwd~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~ 438 (604)
+|++||+.++. .+..+ .+|...|.+++|+|++ +.|++|+.|+.|++||++ ++.+..+.+| .|.+++
T Consensus 99 --tIkIWdi~~~~~~~~~~~~l~~L-~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla 175 (493)
T PTZ00421 99 --TIMGWGIPEEGLTQNISDPIVHL-QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLE 175 (493)
T ss_pred --EEEEEecCCCccccccCcceEEe-cCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEE
Confidence 89999997653 23334 3788999999999975 699999999999999995 6666677665 699999
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCC-CeeEEEECCCCCEEEEEe----cCCeEEEEecCCCc-eeeEee
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDH-PVMSFTIDATDRLALLNV----STQGVHLWDLRDRI-LLRKFQ 511 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~-~i~~~~~s~~~~~l~~~~----~dg~I~lwd~~~~~-~~~~~~ 511 (604)
|+|+|..+++++.|+.|++||++++.....+ .|.. ....+.|.+++..+++++ .|+.|++||+++.. ++....
T Consensus 176 ~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~ 255 (493)
T PTZ00421 176 WNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVD 255 (493)
T ss_pred EECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEec
Confidence 9999999999999999999999987654433 3433 345678888887777654 47899999998754 333333
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEe-CCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCC
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGS-EDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPV 570 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~ 570 (604)
.+... .+...+++++++++++|+ .||.|++||+.+++++..... +..++.+++|.|.
T Consensus 256 ~d~~~--~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 256 LDQSS--ALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred cCCCC--ceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 22222 233456678999999887 599999999999988777654 4567889999986
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-25 Score=231.54 Aligned_cols=262 Identities=24% Similarity=0.344 Sum_probs=218.2
Q ss_pred CCCccceee-cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 288 EFPCETTQV-LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 288 ~~p~~~~~~-l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
.++...+.. +.||.+.|++++|..-+.+|++|+.|.+++|||.. ++.+...+.+|...|.++...+. .+++|+
T Consensus 235 ~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~----sg~C~~~l~gh~stv~~~~~~~~--~~~sgs 308 (537)
T KOG0274|consen 235 LNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCS----TGECTHSLQGHTSSVRCLTIDPF--LLVSGS 308 (537)
T ss_pred cccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecC----CCcEEEEecCCCceEEEEEccCc--eEeecc
Confidence 345666777 99999999999999878899999999999999988 77889999999999999987654 677788
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDG 443 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g 443 (604)
.|. +|++|+++++.++..+. +|..+|.++..+ +..+++|+.|++|++||+ .++.++.+.+| +|.++.+...
T Consensus 309 ~D~--tVkVW~v~n~~~l~l~~-~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~- 382 (537)
T KOG0274|consen 309 RDN--TVKVWDVTNGACLNLLR-GHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE- 382 (537)
T ss_pred CCc--eEEEEeccCcceEEEec-cccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-
Confidence 898 89999999999998887 499999999997 889999999999999999 68999999988 7888877766
Q ss_pred CEEEEEeCCCeEEEEEcCCC-cccccccC-CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc-ccceEEE
Q psy10566 444 KSVLAADTHHRIRTYNFEHL-TDSNLLQE-DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV-TQGQFTI 520 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~-~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i 520 (604)
..+++|+.|+.|++||+++. ++...+.+ ..-+.. +...++++++++.|++|++||..++++++++.++ ... +
T Consensus 383 ~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~--l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~---v 457 (537)
T KOG0274|consen 383 NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSS--LLLRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGG---V 457 (537)
T ss_pred ceEEeeeeccceEeecCCchhhhhhhhcCCcccccc--cccccceeEeccccccEEEeecccCceeeeeccCCccc---E
Confidence 89999999999999999998 66655554 444433 3446789999999999999999999999999984 443 3
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC-CCeeEEEEc
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT-RTVSCVAWN 568 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-~~V~~v~~s 568 (604)
.+.... ...+++++.||++++||++++++...+-.+. .....+++.
T Consensus 458 ~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~~~~~~~~~~~~~~ 504 (537)
T KOG0274|consen 458 SALALG--KEEILCSSDDGSVKLWDLRSGTLIRTLLSTDLGATWGVAPS 504 (537)
T ss_pred EEeecC--cceEEEEecCCeeEEEecccCchhhhhhhcccccccccccC
Confidence 333322 4678999999999999999999988774443 334444443
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-26 Score=206.74 Aligned_cols=291 Identities=18% Similarity=0.323 Sum_probs=235.4
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.++.++.|.||++.||.++.......+.++|.|.+.+||.++ .+.++.++.||.+.|++|.|++.+..+++++.|+
T Consensus 137 ~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~E----sg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~ 212 (481)
T KOG0300|consen 137 KFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLE----SGACLATYTGHTGSVNSIKFHNSGLLLLTASGDE 212 (481)
T ss_pred eEeehhhhcccccceeeehhhcCCcceeecccccceeEEeec----cccceeeecccccceeeEEeccccceEEEccCCc
Confidence 456788899999999999998888899999999999999999 7788999999999999999999999999999998
Q ss_pred ceEEEEEE------CCC------------------------------c----eEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10566 370 CHELWVWN------IET------------------------------E----LLRVKLNHSPEDSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 370 ~~~i~vwd------~~~------------------------------~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s 409 (604)
+..||. +.. + .++..+ .+|...|.++.|...|+.+++
T Consensus 213 --taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~l-tgH~~vV~a~dWL~gg~Q~vT 289 (481)
T KOG0300|consen 213 --TAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRL-TGHRAVVSACDWLAGGQQMVT 289 (481)
T ss_pred --chHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeee-eccccceEehhhhcCcceeee
Confidence 778885 111 0 012222 267788999999999999999
Q ss_pred EecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--cccccccCCCCeeEEEECCCC
Q psy10566 410 GGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL--TDSNLLQEDHPVMSFTIDATD 484 (604)
Q Consensus 410 ~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~--~~~~~~~~~~~i~~~~~s~~~ 484 (604)
++.|.+..+||+ .|..+..+.+| ..+.++-.|..+.+++++.|.+.++||++.. ....+.+|...|+++.|..+.
T Consensus 290 aSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd 369 (481)
T KOG0300|consen 290 ASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD 369 (481)
T ss_pred eeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC
Confidence 999999999999 58888888887 6888889999999999999999999999853 223345578899999998664
Q ss_pred CEEEEEecCCeEEEEecCCCc-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-----eeCC
Q psy10566 485 RLALLNVSTQGVHLWDLRDRI-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-----LSGH 558 (604)
Q Consensus 485 ~~l~~~~~dg~I~lwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-----l~~h 558 (604)
.+++|+.|.+|++||+++.. ++.++..... ...+ ..+..+..|+.-.++..|++||++.. .+.. -.+|
T Consensus 370 -~vVSgSDDrTvKvWdLrNMRsplATIRtdS~-~NRv---avs~g~~iIAiPhDNRqvRlfDlnG~-RlaRlPrtsRqgH 443 (481)
T KOG0300|consen 370 -RVVSGSDDRTVKVWDLRNMRSPLATIRTDSP-ANRV---AVSKGHPIIAIPHDNRQVRLFDLNGN-RLARLPRTSRQGH 443 (481)
T ss_pred -ceeecCCCceEEEeeeccccCcceeeecCCc-ccee---EeecCCceEEeccCCceEEEEecCCC-ccccCCccccccc
Confidence 58899999999999998754 5555554332 2233 33355668888888899999999843 3333 3589
Q ss_pred CCCeeEEEEcCCC-CcEEEEEeCCCcEEEECCCCCC
Q psy10566 559 TRTVSCVAWNPVY-HQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 559 ~~~V~~v~~sp~~-~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...|.|++|..+. -.-|++||.|..+.=|++....
T Consensus 444 rRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 444 RRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred ceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 9999999997652 1347899999999999987643
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-26 Score=226.68 Aligned_cols=292 Identities=16% Similarity=0.242 Sum_probs=233.6
Q ss_pred eecccCCCcEEEEEEcCC-----------CCeEEEEECCCeEEEEEeCCCCceeE-------------------------
Q psy10566 295 QVLNDHCDEVWFCKFSPD-----------GLKLATGSKDTTVIIWDVDPVTFTCQ------------------------- 338 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspd-----------g~~lasgs~dg~i~iwd~~~~~~~~~------------------------- 338 (604)
..+--|...||.+.--|. ...|+|++.|++|++|+++.......
T Consensus 363 ~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d 442 (1080)
T KOG1408|consen 363 SSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHD 442 (1080)
T ss_pred eeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhh
Confidence 344458999999886661 13589999999999999873110000
Q ss_pred --------eeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec---CCCEE
Q psy10566 339 --------HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR---DGTKF 407 (604)
Q Consensus 339 --------~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l 407 (604)
.....-+...+|.+++.||+|++|++|...| .+++|++..-+....+. .|...|.|+.|+. ..+.|
T Consensus 443 ~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~G--nlrVy~Lq~l~~~~~~e-AHesEilcLeyS~p~~~~kLL 519 (1080)
T KOG1408|consen 443 ASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGG--NLRVYDLQELEYTCFME-AHESEILCLEYSFPVLTNKLL 519 (1080)
T ss_pred ccCCcccccchhhcCcccceEEEEECCCcceecccCccC--ceEEEEehhhhhhhhee-cccceeEEEeecCchhhhHhh
Confidence 0001112346799999999999999887776 89999999988777776 7899999999986 45789
Q ss_pred EEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCcccccc------cCCCCe
Q psy10566 408 VCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDG--KSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPV 475 (604)
Q Consensus 408 ~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g--~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i 475 (604)
++++.|..|.+||+. -..+.++.+| .|+++.|...| ..+++++.|..|.+--.........+ .....+
T Consensus 520 ASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTl 599 (1080)
T KOG1408|consen 520 ASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTL 599 (1080)
T ss_pred hhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceE
Confidence 999999999999994 3556677776 69999998877 77899999987765444322211111 125678
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc-eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG-QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~ 554 (604)
..+++.|+.+++++++.|..|+|||+.+++.++.|++.... ...|. +...|.|.|+|+...|.++.++|..+|+++.+
T Consensus 600 YDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIK-v~lDPSgiY~atScsdktl~~~Df~sgEcvA~ 678 (1080)
T KOG1408|consen 600 YDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIK-VILDPSGIYLATSCSDKTLCFVDFVSGECVAQ 678 (1080)
T ss_pred EEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEE-EEECCCccEEEEeecCCceEEEEeccchhhhh
Confidence 89999999999999999999999999999999999976655 33444 34469999999999999999999999999999
Q ss_pred eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 555 LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 555 l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..||...|+.+.|.+| -+.|++.+.||.|.||.+..
T Consensus 679 m~GHsE~VTG~kF~nD-CkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 679 MTGHSEAVTGVKFLND-CKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred hcCcchheeeeeeccc-chhheeecCCceEEEEECch
Confidence 9999999999999999 89999999999999999864
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=209.18 Aligned_cols=263 Identities=17% Similarity=0.241 Sum_probs=215.6
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCC---eEEEEECCCeEEEEEeCCCCceeEeeEEeccC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGL---KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH 346 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~---~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h 346 (604)
+++.|....+|+.. +++.+++.||.++|.+++|.-... .|+++|.|.++++|..+.+....+......||
T Consensus 120 tgsYDg~~riWd~~-------Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GH 192 (423)
T KOG0313|consen 120 TGSYDGTSRIWDLK-------GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGH 192 (423)
T ss_pred EeecCCeeEEEecC-------CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccc
Confidence 44556677777643 678899999999999888864333 59999999999999998665555556666799
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC-------------------------ceEEEEecCCCCCCeEEEEEe
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-------------------------ELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~-------------------------~~~~~~~~~~~~~~v~~~~~~ 401 (604)
...|.+++..++|..+++++.|. .+.+|+..+ +.++..+ .+|..+|.++.|+
T Consensus 193 k~~V~sVsv~~sgtr~~SgS~D~--~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl-~GHt~~Vs~V~w~ 269 (423)
T KOG0313|consen 193 KRSVDSVSVDSSGTRFCSGSWDT--MLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTL-EGHTEPVSSVVWS 269 (423)
T ss_pred ccceeEEEecCCCCeEEeecccc--eeeecccCCCccccccccchhhhhhhhhhhcccccCceEEe-cccccceeeEEEc
Confidence 99999999999999999999998 899999322 1122233 4799999999999
Q ss_pred cCCCEEEEEecCCeEEEEEcC-CCeeeeee-ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc----cccccCCCCe
Q psy10566 402 RDGTKFVCGGIRGQFYQCDIE-GQVLDSWE-GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD----SNLLQEDHPV 475 (604)
Q Consensus 402 ~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~----~~~~~~~~~i 475 (604)
+ ...+++++.|.+|+.||+. +....... +....++..+|..+.+++|+.|..|++||.+++.. ..++.|...|
T Consensus 270 d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwV 348 (423)
T KOG0313|consen 270 D-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWV 348 (423)
T ss_pred C-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhh
Confidence 7 7889999999999999994 55555444 45799999999999999999999999999998642 3456788999
Q ss_pred eEEEECCCCC-EEEEEecCCeEEEEecCCCc-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 476 MSFTIDATDR-LALLNVSTQGVHLWDLRDRI-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 476 ~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.++.|+|... .+++++.|+++++||+++.+ ++..+.+|...+..+ .| .++.+|++|+.|++|+|+...
T Consensus 349 ssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~v---dW-~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 349 SSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSV---DW-NEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEE---ec-cCCceEEeccCcceEEEeccc
Confidence 9999999775 46788899999999999877 899999998765554 44 567799999999999998754
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=229.84 Aligned_cols=247 Identities=13% Similarity=0.193 Sum_probs=201.6
Q ss_pred eEEec-cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce------------------------------------
Q psy10566 340 RKTLE-GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL------------------------------------ 382 (604)
Q Consensus 340 ~~~l~-~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~------------------------------------ 382 (604)
.+.+. .|.+.|.++.||+||+|||+||.|+ .|+||.+...+
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~--virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~ 336 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDG--VIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT 336 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCc--eEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccc
Confidence 34555 7999999999999999999999999 89999875500
Q ss_pred ------------------------EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece-eEEE
Q psy10566 383 ------------------------LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RVNC 436 (604)
Q Consensus 383 ------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v~~ 436 (604)
+... ..+|.+.|.++.|+.+ .+|++++.|.+|++|++ ...+++.|... -|+|
T Consensus 337 s~~~~~~~s~~~~~p~~~f~f~ekP~~e-f~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTc 414 (712)
T KOG0283|consen 337 SSSRKGSQSPCVLLPLKAFVFSEKPFCE-FKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTC 414 (712)
T ss_pred cccccccCCccccCCCccccccccchhh-hhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecCCeeEE
Confidence 0001 1257778999999965 68999999999999999 46788888654 7999
Q ss_pred EEEcC-CCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc-
Q psy10566 437 LWCRS-DGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT- 514 (604)
Q Consensus 437 l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~- 514 (604)
++|+| |.+++++|+-||+|+||++...+.........-|++++|.|+|+..++|+.+|.+++|+....+....+.-+.
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 99999 7899999999999999999988877777777889999999999999999999999999999877765554221
Q ss_pred -------cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC--CCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 515 -------QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT--RTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 515 -------~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~--~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
..++.+.+....++ .+++.+.|..|+|||.+...++..|+|+. ..-....|+.| +.+|+++++|..|+
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~--~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~D-gk~IVs~seDs~VY 571 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPD--EVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSD-GKHIVSASEDSWVY 571 (712)
T ss_pred cCccccCceeeeeEecCCCCC--eEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccC-CCEEEEeecCceEE
Confidence 13555555444343 57777899999999999999999999864 33456789998 89999999999999
Q ss_pred EECCCCCC
Q psy10566 586 IWGPHLNT 593 (604)
Q Consensus 586 iW~~~~~~ 593 (604)
||+.....
T Consensus 572 iW~~~~~~ 579 (712)
T KOG0283|consen 572 IWKNDSFN 579 (712)
T ss_pred EEeCCCCc
Confidence 99985543
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=225.83 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=186.3
Q ss_pred EECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC-CCeEEEEeCCCceEEEEEECCCceE--------EEEecC
Q psy10566 319 GSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD-SSHLLVVGPEDCHELWVWNIETELL--------RVKLNH 389 (604)
Q Consensus 319 gs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd-~~~l~s~~~d~~~~i~vwd~~~~~~--------~~~~~~ 389 (604)
|+.++.|++|+.. ....+..+.+|..+|.+++|+|+ +.+|++|+.|+ +|++||+.++.. ...+ .
T Consensus 50 GG~~gvI~L~~~~----r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~Dg--tIrIWDi~t~~~~~~~i~~p~~~L-~ 122 (568)
T PTZ00420 50 GGLIGAIRLENQM----RKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDL--TIRVWEIPHNDESVKEIKDPQCIL-K 122 (568)
T ss_pred CCceeEEEeeecC----CCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCCccccccccceEEe-e
Confidence 6678899999986 34567889999999999999997 78999999998 899999976421 1223 3
Q ss_pred CCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcC-CCeeeeee-ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc
Q psy10566 390 SPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIE-GQVLDSWE-GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS 466 (604)
Q Consensus 390 ~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~-~~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~ 466 (604)
+|...|.+++|+|++..+ ++++.|+.|++||++ ++....+. ...|.+++|+++|..+++++.|+.|++||++++...
T Consensus 123 gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i 202 (568)
T PTZ00420 123 GHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIA 202 (568)
T ss_pred cCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEE
Confidence 688899999999998764 689999999999995 45444443 247999999999999999999999999999987665
Q ss_pred ccc-cCCCCeeE-----EEECCCCCEEEEEecCC----eEEEEecCC-CceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 467 NLL-QEDHPVMS-----FTIDATDRLALLNVSTQ----GVHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 467 ~~~-~~~~~i~~-----~~~s~~~~~l~~~~~dg----~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
..+ .|.+.+.+ ..|++++.++++++.++ .|++||+++ ..++..+..+.. ...+...+.++++.++++|
T Consensus 203 ~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~-~~~L~p~~D~~tg~l~lsG 281 (568)
T PTZ00420 203 SSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA-SAPLIPHYDESTGLIYLIG 281 (568)
T ss_pred EEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC-ccceEEeeeCCCCCEEEEE
Confidence 433 35444322 33568889999888764 799999995 556655543332 2233334446779999999
Q ss_pred eCCCcEEEEeCCCCcceEEeeC--CCCCeeEEEEcCC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSG--HTRTVSCVAWNPV 570 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~--h~~~V~~v~~sp~ 570 (604)
+.|+.|++|++..+. +..+.. +..++.+++|.|+
T Consensus 282 kGD~tIr~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pk 317 (568)
T PTZ00420 282 KGDGNCRYYQHSLGS-IRKVNEYKSCSPFRSFGFLPK 317 (568)
T ss_pred ECCCeEEEEEccCCc-EEeecccccCCCccceEEccc
Confidence 999999999998764 333322 4678899999997
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-24 Score=197.24 Aligned_cols=252 Identities=15% Similarity=0.194 Sum_probs=212.9
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCe
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQ 415 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~ 415 (604)
+..+.+......|.++.|+++|..+++++.|+ ++++||..+++....+. .++-.+..++|....+.++.++. |.+
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~G~~litss~dD--sl~LYd~~~g~~~~ti~-skkyG~~~~~Fth~~~~~i~sStk~d~t 81 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDDGLLLITSSEDD--SLRLYDSLSGKQVKTIN-SKKYGVDLACFTHHSNTVIHSSTKEDDT 81 (311)
T ss_pred ccccccccCCCceeEEEecCCCCEEEEecCCC--eEEEEEcCCCceeeEee-cccccccEEEEecCCceEEEccCCCCCc
Confidence 34455665678899999999999999999998 89999999999988887 44456888999888888888877 889
Q ss_pred EEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec
Q psy10566 416 FYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 416 i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
|+..++ +.+.++-|.|| .|+.+..+|-+..+++++.|++|++||++..++...+... .-..++|+|.|-++|++..
T Consensus 82 IryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~-~~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 82 IRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS-GRPIAAFDPEGLIFALANG 160 (311)
T ss_pred eEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC-CCcceeECCCCcEEEEecC
Confidence 999999 78999999998 7999999999999999999999999999987776665543 3345789999999999999
Q ss_pred CCeEEEEecCCC--ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe---eEEEE
Q psy10566 493 TQGVHLWDLRDR--ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV---SCVAW 567 (604)
Q Consensus 493 dg~I~lwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V---~~v~~ 567 (604)
.+.|++||++.- .+..++.-..........+-++|+|++++.+...+.+++.|.-+|....++.++...- ...+|
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~f 240 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATF 240 (311)
T ss_pred CCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEE
Confidence 889999999863 4556665443333345556778999999999999999999999999999998875432 57789
Q ss_pred cCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 568 NPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 568 sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
.|+ ++++++|++||+|.+|+++++..
T Consensus 241 tPd-s~Fvl~gs~dg~i~vw~~~tg~~ 266 (311)
T KOG1446|consen 241 TPD-SKFVLSGSDDGTIHVWNLETGKK 266 (311)
T ss_pred CCC-CcEEEEecCCCcEEEEEcCCCcE
Confidence 999 89999999999999999988764
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-24 Score=223.57 Aligned_cols=214 Identities=18% Similarity=0.285 Sum_probs=174.3
Q ss_pred eecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCc---eeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCC
Q psy10566 295 QVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTF---TCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPED 369 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~---~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~ 369 (604)
..+.||.+.|++++|+| ++.+||+|+.|++|+|||+..... ....+..+.+|...|.+++|+|++ .+|++++.|+
T Consensus 69 ~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg 148 (493)
T PTZ00421 69 PILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM 148 (493)
T ss_pred ceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence 35789999999999999 889999999999999999973211 123567889999999999999986 6899999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece---eEEEEEEcCCCCE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV---RVNCLWCRSDGKS 445 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~---~v~~l~~s~~g~~ 445 (604)
+|++||+.++.....+. .|...|.+++|+|++..|++++.|+.|++||++ ++.+..+.+| .+..+.|.+++..
T Consensus 149 --tVrIWDl~tg~~~~~l~-~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ 225 (493)
T PTZ00421 149 --VVNVWDVERGKAVEVIK-CHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDL 225 (493)
T ss_pred --EEEEEECCCCeEEEEEc-CCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCe
Confidence 89999999998877765 677889999999999999999999999999994 6777776665 3456778888877
Q ss_pred EEEEe----CCCeEEEEEcCCCccc-ccc--cCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCceeeEee
Q psy10566 446 VLAAD----THHRIRTYNFEHLTDS-NLL--QEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 446 l~~~~----~dg~I~i~d~~~~~~~-~~~--~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~~~~~~ 511 (604)
+++++ .|+.|++||++..... ... .....+....|+++++.+++++. |+.|++||+.+++.+....
T Consensus 226 ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 226 IITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSS 299 (493)
T ss_pred EEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEee
Confidence 77654 4789999999875422 222 22345666788999999998874 9999999999988766544
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-25 Score=219.61 Aligned_cols=283 Identities=18% Similarity=0.238 Sum_probs=234.4
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeE-EEECC-CCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY-LAWSP-DSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~-l~~sp-d~~~l~s~~~d~ 369 (604)
+..+++.||...|..+++.+.. .++++|.||++++|+-. .........+.+|.+.|.+ +++-+ ++-.+++++.|.
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~--~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~ 81 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKK--GKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT 81 (745)
T ss_pred eeEEEeccCccchheeEecCCe-EEeecCCCCceeeeecc--CcccccceecccCcceeeccceeccccCcceEeecccc
Confidence 4567899999999999877654 79999999999999976 3344555678888888877 88876 444589999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
.+.+|...+..+...+. +|...|.+++...++. +++|+.|.++++|-.. +....+.+| .|.++..-|++ .++
T Consensus 82 --~i~v~~~~~~~P~~~Lk-gH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~-~l~~~l~gH~asVWAv~~l~e~-~~v 155 (745)
T KOG0301|consen 82 --TIIVFKLSQAEPLYTLK-GHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG-ELVYSLQGHTASVWAVASLPEN-TYV 155 (745)
T ss_pred --eEEEEecCCCCchhhhh-ccccceeeeecCCcCc-eEecccccceEEecch-hhhcccCCcchheeeeeecCCC-cEE
Confidence 79999999999888876 8999999999888877 9999999999999763 233336676 68899998988 799
Q ss_pred EEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+|+.|.+|++|.-. .....+..|...|..+++-+++ .+++++.||.|++|++ +++++..+.+|+..++++.. ..
T Consensus 156 TgsaDKtIklWk~~-~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~---~~ 229 (745)
T KOG0301|consen 156 TGSADKTIKLWKGG-TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISM---AL 229 (745)
T ss_pred eccCcceeeeccCC-chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEe---cC
Confidence 99999999999873 3344555688999999998765 4788999999999999 88899999999998888762 36
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++..|+++++|++++||+.. ++.+.+.-..-.|+++.+-++ +. +++|+.||.||||.....+
T Consensus 230 ~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~N-gD-Ivvg~SDG~VrVfT~~k~R 291 (745)
T KOG0301|consen 230 SDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLN-GD-IVVGGSDGRVRVFTVDKDR 291 (745)
T ss_pred CCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeC-CC-EEEeccCceEEEEEecccc
Confidence 67799999999999999987 777888766668999999887 33 7788889999999887654
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=197.25 Aligned_cols=247 Identities=19% Similarity=0.242 Sum_probs=216.2
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec-CCCCCCeEEEEEec-CCCEEEEEecCCeEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQ 418 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i 418 (604)
..+.+|...|.+++|+-+|..|++++.|+ ++.+|+++..+...... .+|.+.|-.++|+| ....|++++.|.+|++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dk--tv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~ 91 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDK--TVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRI 91 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCC--ceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEE
Confidence 55678999999999999999999999999 89999998875444333 46778899999998 5679999999999999
Q ss_pred EEc-CCCeeeeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 419 CDI-EGQVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 419 wd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
||+ .+++....... .-.-+.++|+|.++++++.|..|.+.|.++.+.....+....+..++|+.++.+++.....|.|
T Consensus 92 wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v 171 (313)
T KOG1407|consen 92 WDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCV 171 (313)
T ss_pred EEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceE
Confidence 999 56776655443 4556789999999999999999999999998888777778889999999888888888888999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEE
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
.|.....-+++..++.|.....+ +.++|+|+++|+|+.|-.+.+||+..--++..+.-+.-+|..++||.+ +++||
T Consensus 172 ~ILsypsLkpv~si~AH~snCic---I~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~d-g~~lA 247 (313)
T KOG1407|consen 172 EILSYPSLKPVQSIKAHPSNCIC---IEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHD-GRMLA 247 (313)
T ss_pred EEEeccccccccccccCCcceEE---EEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccC-cceee
Confidence 99999999999999999875444 455799999999999999999999999999999999999999999999 89999
Q ss_pred EEeCCCcEEEECCCCCC
Q psy10566 577 SVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~~~ 593 (604)
++|+|..|-|=++.+|.
T Consensus 248 SaSEDh~IDIA~vetGd 264 (313)
T KOG1407|consen 248 SASEDHFIDIAEVETGD 264 (313)
T ss_pred ccCccceEEeEecccCC
Confidence 99999999888777776
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-25 Score=208.55 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=209.0
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+.+.+|+||...|+.+.|+|+...+++++.|..|+||.+. ..........|..+|+.+..+|.|.||++++.|+
T Consensus 251 ~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~----~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~- 325 (506)
T KOG0289|consen 251 NQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVP----LSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDG- 325 (506)
T ss_pred hhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccc----cccCccccccccccceeeeeccCCcEEEEecCCc-
Confidence 46778999999999999999999999999999999999987 3335566778999999999999999999999999
Q ss_pred eEEEEEECCCceEEEEecCC-CCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEE
Q psy10566 371 HELWVWNIETELLRVKLNHS-PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSV 446 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l 446 (604)
+....|++++..+...... ..-.+++.+|+|||..|.+|..||.+++||+ ++.....|.+| +|..+.|+.+|-++
T Consensus 326 -~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~L 404 (506)
T KOG0289|consen 326 -TWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWL 404 (506)
T ss_pred -eEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEE
Confidence 7888999999988777642 3346899999999999999999999999999 45677788887 79999999999999
Q ss_pred EEEeCCCeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecCCeEEEEecC--CCceeeEeeccccceEEEEe
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQGVHLWDLR--DRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~--~~~~~~~~~~~~~~~~~i~~ 522 (604)
++++.|+.|++||++..+....+.. ..++.++.|++.|.+|++++.+=.|++++-. +...+..+..|.+.. ..
T Consensus 405 at~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~s---t~ 481 (506)
T KOG0289|consen 405 ATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLS---TG 481 (506)
T ss_pred EEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhccccc---ce
Confidence 9999999999999998776555543 4579999999999999999877777777633 455666666666433 33
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
+.+.....+++++|.|..++++.+
T Consensus 482 v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 482 VRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred eeecccceEEeeccchhheEEeec
Confidence 556688899999999999888754
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=213.67 Aligned_cols=329 Identities=22% Similarity=0.309 Sum_probs=241.8
Q ss_pred hHHHHHHHHHHHHhHhcCCCCCCCcccccCccccccccCcCc--CCCCccceeecccCCCcEEEEEEcCCCCeEEEEECC
Q psy10566 245 RRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTK--EEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKD 322 (604)
Q Consensus 245 ~rl~~ll~q~~~~q~~~~~~~~~~~~~~~~~~~l~~d~~~~~--~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~d 322 (604)
+.+...+..++.+ +.|+. ...+.-.+|+.+|+....... ..||..+...+.||++.|.|+...|.|.+||+|+.|
T Consensus 345 r~irErFeRcLDL--YL~PR-~rK~rlniDpe~LiPkLPsp~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdD 421 (733)
T KOG0650|consen 345 RSIRERFERCLDL--YLAPR-VRKMRLNIDPESLIPKLPSPKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDD 421 (733)
T ss_pred HHHHHHHHHhHHh--hhCcc-cccceecCCHHHhcccCCChhhcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCC
Confidence 3455555555544 33332 222234456677777766554 568888999999999999999999999999999999
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCe-EEEEeCCCceEEEEEECCCc--------------------
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH-LLVVGPEDCHELWVWNIETE-------------------- 381 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~-l~s~~~d~~~~i~vwd~~~~-------------------- 381 (604)
|+|+||.+. ++.++.++. -.+.|.||+|+|.+.. +++++... .+.+.+..-|
T Consensus 422 GtvriWEi~----TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~--~~~ivnp~~G~~~e~~~t~ell~~~~~~~~ 494 (733)
T KOG0650|consen 422 GTVRIWEIA----TGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGE--CVLIVNPIFGDRLEVGPTKELLASAPNESE 494 (733)
T ss_pred CcEEEEEee----cceEEEEEe-ecceeEEEEecCCCCceeEEEEecC--ceEEeCccccchhhhcchhhhhhcCCCccC
Confidence 999999999 666777666 3457999999998753 22223222 2333322111
Q ss_pred ----------------eEEEEecCCCCCCeEEEEEecCCCEEEEEecC---CeEEEEEcCCC-eeeee--eceeEEEEEE
Q psy10566 382 ----------------LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---GQFYQCDIEGQ-VLDSW--EGVRVNCLWC 439 (604)
Q Consensus 382 ----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~-~~~~~--~~~~v~~l~~ 439 (604)
..-..+...|...|..+.|+..|.+|++...+ ..|.|+++... ....| ....+.++.|
T Consensus 495 p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~F 574 (733)
T KOG0650|consen 495 PDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKF 574 (733)
T ss_pred CcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEe
Confidence 00011112366789999999999999998765 47889998532 22223 2346899999
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-ceeeEeeccccce
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQ 517 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~ 517 (604)
+|...++++++. ..|++||+....... .+.....|.+++++|.|..+++++.|+.+..||+.-. ++.+++..|..
T Consensus 575 HPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~-- 651 (733)
T KOG0650|consen 575 HPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEK-- 651 (733)
T ss_pred cCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhh--
Confidence 999998888765 579999998765443 3445678999999999999999999999999999754 56777777776
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC---------CcceEEeeCCCCC----eeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKR---------ELPIATLSGHTRT----VSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~---------~~~~~~l~~h~~~----V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
.++.+.+++.-.++++|+.||++.||.-.- --++..+.+|... |..+.|||. ..+|+|++.||+|
T Consensus 652 -avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~-qpWLfsAGAd~ti 729 (733)
T KOG0650|consen 652 -AVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPR-QPWLFSAGADGTI 729 (733)
T ss_pred -hhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCC-CceEEecCCCceE
Confidence 455566678888999999999999996431 1356788899654 999999999 8899999999999
Q ss_pred EEEC
Q psy10566 585 RIWG 588 (604)
Q Consensus 585 ~iW~ 588 (604)
++|.
T Consensus 730 rlfT 733 (733)
T KOG0650|consen 730 RLFT 733 (733)
T ss_pred EeeC
Confidence 9993
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=207.87 Aligned_cols=282 Identities=16% Similarity=0.198 Sum_probs=229.4
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEEEEECC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~ 379 (604)
.+.|+++.|+|....|++|+.||+++||.++ ......++.+.--..+|.+.+|.|+|. .+++++... .++.||+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvD--Gk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrk--y~ysyDle 288 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVD--GKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRK--YLYSYDLE 288 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEec--CccChhheeeeeccCccceeeecCCCceEEEecccce--EEEEeecc
Confidence 3689999999999999999999999999998 334445666666678999999999999 777777777 89999999
Q ss_pred CceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece-eEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 380 TELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 380 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
+.+....-. ......+.....++++++++..+..|.|.+... ++..+..++-. .+..++|+.+++.+++++.+|.|
T Consensus 289 ~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV 368 (514)
T KOG2055|consen 289 TAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEV 368 (514)
T ss_pred ccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceE
Confidence 887543222 122345778889999999999999999999877 56666666543 79999999999999999999999
Q ss_pred EEEEcCCCcccccccCCCC--eeEEEECCCCCEEEEEecCCeEEEEecCC------CceeeEeeccccceEEEEeeeCCC
Q psy10566 456 RTYNFEHLTDSNLLQEDHP--VMSFTIDATDRLALLNVSTQGVHLWDLRD------RILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~~~~~--i~~~~~s~~~~~l~~~~~dg~I~lwd~~~------~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
.+||++...+.......+. -++++.++++.++++|+..|.|.|||..+ .+++..+. +-.+.|..+.|++
T Consensus 369 ~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~d---NLtt~Itsl~Fn~ 445 (514)
T KOG2055|consen 369 YVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVD---NLTTAITSLQFNH 445 (514)
T ss_pred EEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhh---hhheeeeeeeeCc
Confidence 9999999877776665554 46788889999999999999999999764 23444333 3445777788899
Q ss_pred CCcEEEEEeC--CCcEEEEeCCCCcceEEeeCC---CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 528 NQDFVASGSE--DGKVYIWHVKRELPIATLSGH---TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 528 ~~~~l~sgs~--dg~I~iwd~~~~~~~~~l~~h---~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+.+++|.+|. +..+++-.+.+......++.. -+.|+||+|+|. +.++|.|..+|.|.+|.+.
T Consensus 446 d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~-sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 446 DAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPN-SGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred chhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCC-CceEEeecCCCceeeEeec
Confidence 9999988876 678999998887666655543 367899999998 8899999999999999875
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-24 Score=216.38 Aligned_cols=246 Identities=21% Similarity=0.292 Sum_probs=211.6
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.......+.+.|+++.|+++|.+||+|..+|.|.|||.. ..+.+..+.+ |...|.+++|. +..+.+|+.++
T Consensus 209 v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~----~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~-- 280 (484)
T KOG0305|consen 209 VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVK----EQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDG-- 280 (484)
T ss_pred eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehh----hccccccccCCcCceeEEEecc--CceEEEecCCC--
Confidence 334444458999999999999999999999999999998 6667788888 99999999998 55777888887
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCC-CCEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSD-GKSVL 447 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~-g~~l~ 447 (604)
.|..+|+...+.......+|...|..+.|++|+.++++|+.|+.+.|||. .......+..| .|..++|+|- ...|+
T Consensus 281 ~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLA 360 (484)
T KOG0305|consen 281 KILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLA 360 (484)
T ss_pred cEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceE
Confidence 89999999887666655689999999999999999999999999999999 44556666666 7999999995 45566
Q ss_pred EE--eCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 448 AA--DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 448 ~~--~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
+| +.|+.|++||..++.....+.....|.++.|++..+.++++. .++.|.||+..+.+.+..+.+|... +..+
T Consensus 361 sGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~R---Vl~l 437 (484)
T KOG0305|consen 361 TGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSR---VLYL 437 (484)
T ss_pred EcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcce---eEEE
Confidence 65 468999999999999999999999999999999998887754 4678999999999999999999985 4445
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
..+|+|..|++|+.|.++++|++-..
T Consensus 438 a~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 438 ALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EECCCCCEEEEecccCcEEeccccCC
Confidence 66899999999999999999998764
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-25 Score=216.82 Aligned_cols=284 Identities=22% Similarity=0.377 Sum_probs=219.6
Q ss_pred EEEcC---CCCeEEEEECCCeEEEEEeCCCCce--eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 307 CKFSP---DGLKLATGSKDTTVIIWDVDPVTFT--CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 307 v~fsp---dg~~lasgs~dg~i~iwd~~~~~~~--~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+.|++ ....||.+..||.|.++|....... ...+.....|...|..+.|-|....|++++.|. ++++||++++
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDs--T~r~Wdvk~s 132 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDS--TIRPWDVKTS 132 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCc--eeeeeeeccc
Confidence 45554 2348999999999999998722111 111355667999999999999778889999888 9999999998
Q ss_pred eEEEE-ecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCee----------------------------eeeec
Q psy10566 382 LLRVK-LNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVL----------------------------DSWEG 431 (604)
Q Consensus 382 ~~~~~-~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~----------------------------~~~~~ 431 (604)
++... ...+|...|.+++|.| +...|++|+.||.|.+||++-... ..+..
T Consensus 133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA 212 (720)
T KOG0321|consen 133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA 212 (720)
T ss_pred eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence 87655 3348999999999999 556889999999999999842110 01111
Q ss_pred --eeEEE---EEEcCCCCEEEEEeC-CCeEEEEEcCCCcccccc---------cC---CCCeeEEEECCCCCEEEEEecC
Q psy10566 432 --VRVNC---LWCRSDGKSVLAADT-HHRIRTYNFEHLTDSNLL---------QE---DHPVMSFTIDATDRLALLNVST 493 (604)
Q Consensus 432 --~~v~~---l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~~~~~---------~~---~~~i~~~~~s~~~~~l~~~~~d 493 (604)
..+.. +.+..|...|++++. |+.|++||++........ .+ ...+.++..+..|.++++.|.|
T Consensus 213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD 292 (720)
T KOG0321|consen 213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTD 292 (720)
T ss_pred ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecC
Confidence 12333 555667777888777 999999999875332211 11 3467889999999999999999
Q ss_pred CeEEEEecCCC--ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc-ceEEeeCCCCCeeEEEEcCC
Q psy10566 494 QGVHLWDLRDR--ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL-PIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 494 g~I~lwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~-~~~~l~~h~~~V~~v~~sp~ 570 (604)
+.|++|++.+. .++..+.++....+.+..+. +|++.++++|+.|...++|.+.+.+ ....+.||...|++|+|.|.
T Consensus 293 ~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~l-Spd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS 371 (720)
T KOG0321|consen 293 NSIYFYNMRSLSISPVAEFSGKLNSSFYVKSEL-SPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPS 371 (720)
T ss_pred CcEEEEeccccCcCchhhccCcccceeeeeeec-CCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccc
Confidence 99999999864 45677777777666776554 5999999999999999999998754 46678899999999999987
Q ss_pred CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.-.-+++|++|.+++||++..+-
T Consensus 372 ~~t~v~TcSdD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 372 ATTPVATCSDDFRVKIWRLSNGL 394 (720)
T ss_pred cCCCceeeccCcceEEEeccCch
Confidence 66778999999999999996653
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=210.92 Aligned_cols=260 Identities=15% Similarity=0.196 Sum_probs=221.8
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+++.|...++|+..... ...+.+|.|-.+.|+.+.|.++++.+++++.|+.+++|+++ ......++.||++.
T Consensus 192 tgg~Dr~Ik~W~v~~~k----~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd----~~r~~~TLsGHtdk 263 (459)
T KOG0288|consen 192 TGGSDRIIKLWNVLGEK----SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVD----SLRLRHTLSGHTDK 263 (459)
T ss_pred hcchhhhhhhhhcccch----hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeecc----chhhhhhhcccccc
Confidence 45667777888765543 45778899999999999999999999999999999999998 77788999999999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~ 428 (604)
|+++.|......+++++.|. +|+.||+....+...+.. .+.+..+..+ ...+++|..|++|++||.. +.....
T Consensus 264 Vt~ak~~~~~~~vVsgs~DR--tiK~WDl~k~~C~kt~l~--~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~s 337 (459)
T KOG0288|consen 264 VTAAKFKLSHSRVVSGSADR--TIKLWDLQKAYCSKTVLP--GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRS 337 (459)
T ss_pred eeeehhhccccceeeccccc--hhhhhhhhhhheeccccc--cccccceEec--ceeeeecccccceEEEeccCCceeeE
Confidence 99999998887799999998 899999999888877763 3456666665 6678999999999999984 555555
Q ss_pred eece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-----CCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 429 WEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-----EDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 429 ~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
...+ .|+++..+++|..+++++.|.++.+.|+++......+. ..+..+.+.|||++.|+++|+.||.|+||++.
T Consensus 338 v~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~ 417 (459)
T KOG0288|consen 338 VPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVF 417 (459)
T ss_pred eecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEcc
Confidence 5543 89999999999999999999999999999987665543 25568899999999999999999999999999
Q ss_pred CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
++++...+....... .|.++.|.|.|..+++++.++.+.+|
T Consensus 418 tgKlE~~l~~s~s~~-aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 418 TGKLEKVLSLSTSNA-AITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred CceEEEEeccCCCCc-ceEEEEEcCCCchhhcccCCcceEec
Confidence 999988887655532 56677788999999999999999999
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-25 Score=195.95 Aligned_cols=250 Identities=22% Similarity=0.306 Sum_probs=205.5
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
..+.+.++.||++.||||..+-+.++++||+.|.++++||++ +++.+..++ ...+|..+.|+++|++++.+..+.
T Consensus 41 nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~----tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~ 115 (327)
T KOG0643|consen 41 NGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVE----TGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQ 115 (327)
T ss_pred CCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcC----CCcEEEEee-cCCeeEEEeeccCCcEEEEEehhh
Confidence 367788999999999999999999999999999999999999 666777776 467899999999999888876542
Q ss_pred ---ceEEEEEECC-------CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCe-eeee--eceeEE
Q psy10566 370 ---CHELWVWNIE-------TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQV-LDSW--EGVRVN 435 (604)
Q Consensus 370 ---~~~i~vwd~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~-~~~~--~~~~v~ 435 (604)
.+.|.++|++ ..++..++. .+.+.++.+-|.|.++.|++|..||.|..||.. |.. +..- +.+.|+
T Consensus 116 mg~~~~v~~fdi~~~~~~~~s~ep~~kI~-t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~In 194 (327)
T KOG0643|consen 116 MGYTCFVSVFDIRDDSSDIDSEEPYLKIP-TPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKIN 194 (327)
T ss_pred cCcceEEEEEEccCChhhhcccCceEEec-CCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccc
Confidence 2379999987 344555665 456889999999999999999999999999995 433 3332 334899
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCe--------------EEEEec
Q psy10566 436 CLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG--------------VHLWDL 501 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--------------I~lwd~ 501 (604)
.+.++++..++++++.|.+-++||+.+......+....|+++.+++|...+++.|+.... -+.|++
T Consensus 195 d~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~ 274 (327)
T KOG0643|consen 195 DLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHL 274 (327)
T ss_pred cccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHH
Confidence 999999999999999999999999999999999999999999999998888887764322 223333
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
-..+.+..+++|-+ +|.+++++|+|+..++|++||.|++.....
T Consensus 275 i~eEEigrvkGHFG---PINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 275 IFEEEIGRVKGHFG---PINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred HHHHHhcccccccc---CcceeEECCCCcccccCCCCceEEEEEecc
Confidence 33355667778887 455667789999999999999999986653
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=220.50 Aligned_cols=286 Identities=16% Similarity=0.310 Sum_probs=231.3
Q ss_pred CCCcEE---EEEEc-CCCCeEEEEECCCeEEEEEeCCCCce--eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 300 HCDEVW---FCKFS-PDGLKLATGSKDTTVIIWDVDPVTFT--CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 300 H~~~V~---~v~fs-pdg~~lasgs~dg~i~iwd~~~~~~~--~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
|...|. .+..+ |.+++|+|||.||.|++|++...... ......++.|.+.|+.++..-+++.|++++.|- +|
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDt--TV 97 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDT--TV 97 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCc--eE
Confidence 444444 34444 45678999999999999998732221 124677888999999999999999999999998 89
Q ss_pred EEEECCCc--eEEEEecCCCCCCeEEEEE-ecCCCEEEEEecCCeEEEEEcC-C--Ceeeeee---------ce--eEEE
Q psy10566 374 WVWNIETE--LLRVKLNHSPEDSLTSCSW-NRDGTKFVCGGIRGQFYQCDIE-G--QVLDSWE---------GV--RVNC 436 (604)
Q Consensus 374 ~vwd~~~~--~~~~~~~~~~~~~v~~~~~-~~~~~~l~s~~~dg~i~iwd~~-~--~~~~~~~---------~~--~v~~ 436 (604)
++|+...+ -+...+. .|.+.|.|+++ .++...+++||-|+.|.+||++ + +.+..+. ++ .|.+
T Consensus 98 K~W~~~~~~~~c~stir-~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYS 176 (735)
T KOG0308|consen 98 KVWNAHKDNTFCMSTIR-THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYS 176 (735)
T ss_pred EEeecccCcchhHhhhh-cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceee
Confidence 99999877 3444444 78999999999 7889999999999999999995 2 2222222 22 6889
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCcc-cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc
Q psy10566 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTD-SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ 515 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg~I~i~d~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~ 515 (604)
++..+.|..+++|+..+.+++||.++.+. ..+.+|...|..+..++||..++++++||+|++||+...+++.++..|..
T Consensus 177 LA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e 256 (735)
T KOG0308|consen 177 LAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKE 256 (735)
T ss_pred eecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccC
Confidence 99999999999999999999999998754 45567899999999999999999999999999999999999999999998
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+.... .+++=..+++|+.||.|+.=|+++......+-....+|..+..+.. ..-+-+++.|+.|+-|.....
T Consensus 257 ~VWaL~---~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~-~~~~WvtTtds~I~rW~~~~~ 329 (735)
T KOG0308|consen 257 GVWALQ---SSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEH-DNSVWVTTTDSSIKRWKLEPD 329 (735)
T ss_pred ceEEEe---eCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccc-cCCceeeeccccceecCCccc
Confidence 755543 4578889999999999999999985444444445677888888765 344477788999999987654
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-23 Score=217.23 Aligned_cols=220 Identities=12% Similarity=0.120 Sum_probs=173.9
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCC-C--------eeeeeece--eEEEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEG-Q--------VLDSWEGV--RVNCLWC 439 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~-~--------~~~~~~~~--~v~~l~~ 439 (604)
.+++|+......+..+. +|...|.+++|+|+ +..|++|+.||.|++||+.. . .+..+.+| .|.+++|
T Consensus 55 vI~L~~~~r~~~v~~L~-gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf 133 (568)
T PTZ00420 55 AIRLENQMRKPPVIKLK-GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDW 133 (568)
T ss_pred EEEeeecCCCceEEEEc-CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEE
Confidence 79999987776666665 78899999999996 78999999999999999942 1 22344454 6999999
Q ss_pred cCCCCEE-EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceE
Q psy10566 440 RSDGKSV-LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQF 518 (604)
Q Consensus 440 s~~g~~l-~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~ 518 (604)
+|++..+ ++++.|+.|++||+++......+.+...|.+++|+|+|.++++++.|+.|++||+++++.+..+.+|.+...
T Consensus 134 ~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~ 213 (568)
T PTZ00420 134 NPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKN 213 (568)
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCce
Confidence 9998765 688999999999999887655555677899999999999999999999999999999999999999887543
Q ss_pred E--EEeeeCCCCCcEEEEEeCCC----cEEEEeCCC-CcceEEeeCC--CCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 519 T--IHSCFGGANQDFVASGSEDG----KVYIWHVKR-ELPIATLSGH--TRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 519 ~--i~~~~~~~~~~~l~sgs~dg----~I~iwd~~~-~~~~~~l~~h--~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
. +....+++++.+|++++.|+ .|+|||+++ ++++..+..+ .+.+.. .|.++.+.++++|+.|++|++|++
T Consensus 214 s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p-~~D~~tg~l~lsGkGD~tIr~~e~ 292 (568)
T PTZ00420 214 TKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIP-HYDESTGLIYLIGKGDGNCRYYQH 292 (568)
T ss_pred eEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEE-eeeCCCCCEEEEEECCCeEEEEEc
Confidence 2 22223457888999888764 799999995 6667665433 233333 344444789999999999999999
Q ss_pred CCCC
Q psy10566 590 HLNT 593 (604)
Q Consensus 590 ~~~~ 593 (604)
..+.
T Consensus 293 ~~~~ 296 (568)
T PTZ00420 293 SLGS 296 (568)
T ss_pred cCCc
Confidence 7653
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-23 Score=205.59 Aligned_cols=271 Identities=14% Similarity=0.075 Sum_probs=200.6
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEE-EEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL-VVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~-s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
+..+++++.|+.|++||+. +.+....+..+. .+.+++|+|+++.++ +++.++ .|++||..+++....+...
T Consensus 1 ~~~~~s~~~d~~v~~~d~~----t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~--~v~~~d~~~~~~~~~~~~~- 72 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTA----TLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSD--TIQVIDLATGEVIGTLPSG- 72 (300)
T ss_pred CcEEEEecCCCEEEEEECC----CCceEEEEECCC-CCCceEECCCCCEEEEEECCCC--eEEEEECCCCcEEEeccCC-
Confidence 3578899999999999987 344566666554 467899999999875 445555 8999999998877666532
Q ss_pred CCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCC-Ceeeeee-ceeEEEEEEcCCCCEEEEEeCCC-eEEEEEcCCCcccc
Q psy10566 392 EDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEG-QVLDSWE-GVRVNCLWCRSDGKSVLAADTHH-RIRTYNFEHLTDSN 467 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~-~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg-~I~i~d~~~~~~~~ 467 (604)
..+..++|+|+++.++++ +.++.+++||+.. +.+..+. +..+.+++++|+|+.+++++.++ .+.+||..+.....
T Consensus 73 -~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~ 151 (300)
T TIGR03866 73 -PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD 151 (300)
T ss_pred -CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEE
Confidence 335678999999977655 5689999999964 4555554 34578899999999999888775 57778988765544
Q ss_pred cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccc----eEEEEeeeCCCCCcEEEE-EeCCCcE
Q psy10566 468 LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQG----QFTIHSCFGGANQDFVAS-GSEDGKV 541 (604)
Q Consensus 468 ~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~s-gs~dg~I 541 (604)
.......+.+++|+|+++.+++++ .++.|++||+.+++.+..+..+... ......+.+++++++++. .+.++.|
T Consensus 152 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i 231 (300)
T TIGR03866 152 NVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRV 231 (300)
T ss_pred EEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeE
Confidence 333445567899999999886654 5899999999998877766532111 001112345689987554 4557789
Q ss_pred EEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE-eCCCcEEEECCCCCCC
Q psy10566 542 YIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV-SDDCTVRIWGPHLNTN 594 (604)
Q Consensus 542 ~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~-s~Dg~I~iW~~~~~~~ 594 (604)
.+||..+++.+..+. +...+.+++|+|+ +.+|+++ +.+|.|++||+.+++.
T Consensus 232 ~v~d~~~~~~~~~~~-~~~~~~~~~~~~~-g~~l~~~~~~~~~i~v~d~~~~~~ 283 (300)
T TIGR03866 232 AVVDAKTYEVLDYLL-VGQRVWQLAFTPD-EKYLLTTNGVSNDVSVIDVAALKV 283 (300)
T ss_pred EEEECCCCcEEEEEE-eCCCcceEEECCC-CCEEEEEcCCCCeEEEEECCCCcE
Confidence 999999988776654 4457899999999 6666665 5799999999998773
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-24 Score=224.38 Aligned_cols=252 Identities=21% Similarity=0.281 Sum_probs=207.4
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCC---C-----------CceeEeeEEeccCCCCeeEEEECC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP---V-----------TFTCQHRKTLEGHTLGVAYLAWSP 357 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~---~-----------~~~~~~~~~l~~h~~~V~~l~~sp 357 (604)
+.+.++..|.+.|+|+.|+|||++||+||.|+.|.||.... . ...++....+.+|...|..++|+|
T Consensus 60 k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp 139 (942)
T KOG0973|consen 60 KHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP 139 (942)
T ss_pred hhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC
Confidence 45567788999999999999999999999999999999872 0 123567889999999999999999
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec-----
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG----- 431 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~----- 431 (604)
++.+|++++.|+ +|.+||..+.+.+..+. +|.+.|..+.|.|-|++|++-+.|++|++|.+. -...+...+
T Consensus 140 ~~~~lvS~s~Dn--sViiwn~~tF~~~~vl~-~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~ 216 (942)
T KOG0973|consen 140 DDSLLVSVSLDN--SVIIWNAKTFELLKVLR-GHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEES 216 (942)
T ss_pred CccEEEEecccc--eEEEEccccceeeeeee-cccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhC
Confidence 999999999999 89999999997776666 889999999999999999999999999999973 233333332
Q ss_pred ---eeEEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCc-ccccccCCCCeeEEEECCC-------------CC----E
Q psy10566 432 ---VRVNCLWCRSDGKSVLAADT----HHRIRTYNFEHLT-DSNLLQEDHPVMSFTIDAT-------------DR----L 486 (604)
Q Consensus 432 ---~~v~~l~~s~~g~~l~~~~~----dg~I~i~d~~~~~-~~~~~~~~~~i~~~~~s~~-------------~~----~ 486 (604)
.....+.|+|||.++++... -..+.|.+-.+-+ ...+++|..++.++.|+|. .. .
T Consensus 217 ~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i 296 (942)
T KOG0973|consen 217 PLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCI 296 (942)
T ss_pred CCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEE
Confidence 15788999999999998743 3468888876654 5667889999999999981 11 6
Q ss_pred EEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 487 ALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 487 l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+++|+.|++|.||.....+++...... ....|.-+.|+|||..|+.+|.||+|.++....
T Consensus 297 ~AvgSqDrSlSVW~T~~~RPl~vi~~l--f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 297 AAVGSQDRSLSVWNTALPRPLFVIHNL--FNKSIVDMSWSPDGFSLFACSLDGTVALIHFEE 356 (942)
T ss_pred EEEecCCccEEEEecCCCCchhhhhhh--hcCceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence 789999999999998777766544322 223556677889999999999999999999874
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-23 Score=213.40 Aligned_cols=295 Identities=17% Similarity=0.269 Sum_probs=244.5
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+.+.+++++...|+++.=+|-=..+|.|..+|+|.|+++. ..+.+.+++...+.|++++|..||+.+++.+...
T Consensus 192 ~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK----~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~- 266 (910)
T KOG1539|consen 192 GKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLK----FDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSN- 266 (910)
T ss_pred CcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcc----cCcEEEEEEccccceeEEEeccCCCeeEEeccCC-
Confidence 57889999999999999999988899999999999999998 6667788884469999999999998877766553
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC---C--Ceee------------------
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE---G--QVLD------------------ 427 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~---~--~~~~------------------ 427 (604)
|.+.+||++..+.+......|.+.|....|.|....+++++.|..+++|-.+ | +.++
T Consensus 267 G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~ 346 (910)
T KOG1539|consen 267 GDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQ 346 (910)
T ss_pred ceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccC
Confidence 4899999999888888877787788888888888888888888776666221 1 0000
Q ss_pred -------------------------------------------------------------------------------e
Q psy10566 428 -------------------------------------------------------------------------------S 428 (604)
Q Consensus 428 -------------------------------------------------------------------------------~ 428 (604)
.
T Consensus 347 g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~t 426 (910)
T KOG1539|consen 347 GHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYT 426 (910)
T ss_pred cEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEE
Confidence 0
Q ss_pred ee-------------------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc----cCCCCeeEEEECCCCC
Q psy10566 429 WE-------------------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL----QEDHPVMSFTIDATDR 485 (604)
Q Consensus 429 ~~-------------------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~----~~~~~i~~~~~s~~~~ 485 (604)
|. ...+++++.++.|++.+.|+..|.|.+|++.++-....+ .|..+|+.++.+.-++
T Consensus 427 W~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~ 506 (910)
T KOG1539|consen 427 WNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNR 506 (910)
T ss_pred EeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCc
Confidence 00 013678899999999999999999999999998666555 5789999999999999
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEE
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCV 565 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v 565 (604)
.+++++.+|-+.+||..+...+..+.-... +..+..+.....++.+.+|-.|+++|+.+.+.+..+.||.+.|+++
T Consensus 507 ~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~----~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~ 582 (910)
T KOG1539|consen 507 LLVSAGADGILKFWDFKKKVLKKSLRLGSS----ITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDM 582 (910)
T ss_pred eEEEccCcceEEEEecCCcceeeeeccCCC----cceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeee
Confidence 999999999999999999887776653332 2223333556688999999999999999999999999999999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 566 AWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 566 ~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
+|||| +++|++++.|++||+||+.++...
T Consensus 583 ~FS~D-grWlisasmD~tIr~wDlpt~~lI 611 (910)
T KOG1539|consen 583 TFSPD-GRWLISASMDSTIRTWDLPTGTLI 611 (910)
T ss_pred EeCCC-CcEEEEeecCCcEEEEeccCccee
Confidence 99999 899999999999999999998743
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-23 Score=213.21 Aligned_cols=290 Identities=16% Similarity=0.264 Sum_probs=238.1
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.+..++.-.+.|+.++|..||. .+|+|+..|.+.+||++ ..+.+..+ ..|.+.|....|.|....+++++.|+
T Consensus 235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe----~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~Dn 310 (910)
T KOG1539|consen 235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLE----KKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADN 310 (910)
T ss_pred cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcC----CCeeeeeeeccccCCcccceecCCCceEeeccCCC
Confidence 34455554469999999999998 77888888999999998 33333433 47889999999999999999999998
Q ss_pred ceEEEEEECCCceE-EEEecCCC---------------------------------------------------------
Q psy10566 370 CHELWVWNIETELL-RVKLNHSP--------------------------------------------------------- 391 (604)
Q Consensus 370 ~~~i~vwd~~~~~~-~~~~~~~~--------------------------------------------------------- 391 (604)
...++++|...|.. ..++..+|
T Consensus 311 Slk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~ 390 (910)
T KOG1539|consen 311 SLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFST 390 (910)
T ss_pred ceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccch
Confidence 66677777332210 00000000
Q ss_pred ---------------------------------------------------------CCCeEEEEEecCCCEEEEEecCC
Q psy10566 392 ---------------------------------------------------------EDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 392 ---------------------------------------------------------~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
...+++++.++.|++.+.|+..|
T Consensus 391 ~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G 470 (910)
T KOG1539|consen 391 EKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKG 470 (910)
T ss_pred hhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCC
Confidence 12278899999999999999999
Q ss_pred eEEEEEcC-CCeeeeee-----ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEE
Q psy10566 415 QFYQCDIE-GQVLDSWE-----GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 415 ~i~iwd~~-~~~~~~~~-----~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 488 (604)
.|-+|++. |-....+. ...|+.++...-++.+++++.+|.+.+||+........+.-...+.++.++.....++
T Consensus 471 ~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a 550 (910)
T KOG1539|consen 471 TIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLA 550 (910)
T ss_pred eEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhh
Confidence 99999995 44444552 2379999999999999999999999999999988777777889999999999999999
Q ss_pred EEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s 568 (604)
++..|-.|+++|..+.+.++.|.||... +....+||+|++|++++.|++|++||+-++.++-.+. -..+++++.|+
T Consensus 551 ~~~ddf~I~vvD~~t~kvvR~f~gh~nr---itd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~S 626 (910)
T KOG1539|consen 551 IALDDFSIRVVDVVTRKVVREFWGHGNR---ITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFS 626 (910)
T ss_pred hhcCceeEEEEEchhhhhhHHhhccccc---eeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEEC
Confidence 9999999999999999999999999984 5556678999999999999999999999999988775 45788999999
Q ss_pred CCCCcEEEEEeCC-CcEEEECCC
Q psy10566 569 PVYHQMIASVSDD-CTVRIWGPH 590 (604)
Q Consensus 569 p~~~~~l~s~s~D-g~I~iW~~~ 590 (604)
|+ +.+|||+..| .-|++|.-.
T Consensus 627 Pn-gD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 627 PN-GDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred CC-CCEEEEEEecCceEEEEEch
Confidence 99 8999999998 669999654
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=191.85 Aligned_cols=238 Identities=13% Similarity=0.219 Sum_probs=194.7
Q ss_pred CCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC-CCeEEEEeCCCceEEEEEE
Q psy10566 300 HCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD-SSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 300 H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd-~~~l~s~~~d~~~~i~vwd 377 (604)
-.+.+..++|+++.. .+++++.||+++|||.. ....++..++.|...|.++.|++. +..+++++.|+ +|++|+
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~---~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~--TiKLW~ 133 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLT---MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDG--TIKLWD 133 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccC---CCCcchhHHHhhhhheEEeccccccceeEEeeccCC--ceEeec
Confidence 457899999999754 78888999999999975 344578899999999999999985 45677778888 899999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcC-CCCEEEEEeC
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRS-DGKSVLAADT 451 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~-~g~~l~~~~~ 451 (604)
...+..+.++. +|...|...+|+| ..+.|++++.|+.+++||++ |+.+. +..| .+.++.|+. +.+.+++|+.
T Consensus 134 ~~r~~Sv~Tf~-gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~v 211 (311)
T KOG0277|consen 134 PNRPNSVQTFN-GHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGV 211 (311)
T ss_pred CCCCcceEeec-CCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCC
Confidence 99999888887 7999999999999 67899999999999999994 55554 4444 688888877 6778999999
Q ss_pred CCeEEEEEcCCCcc--cccccCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCC
Q psy10566 452 HHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 452 dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
|+.|++||++..+. ..+..|.-.|..+.|+|.. ..|++++.|-++++||...+ ..+.++..|+.-+..+.... .
T Consensus 212 d~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~--~ 289 (311)
T KOG0277|consen 212 DNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSL--F 289 (311)
T ss_pred CceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEecccccc--c
Confidence 99999999998643 3445678899999999976 56788889999999998854 45666766766444443333 3
Q ss_pred CCcEEEEEeCCCcEEEEeC
Q psy10566 528 NQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~ 546 (604)
++.++|+.+.|+.++||+-
T Consensus 290 ~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 290 DPGQVASTGWDELLYVWNP 308 (311)
T ss_pred cCceeeecccccceeeecc
Confidence 6779999999999999984
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=207.96 Aligned_cols=281 Identities=14% Similarity=0.175 Sum_probs=231.0
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
.|..-|..+.+|...+++.||+ .|.|+|||+.... ....+..+.. ...-|.++...|||+.|++||.-. ++.||
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg-~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeas--tlsiW 492 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPG-NKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEAS--TLSIW 492 (705)
T ss_pred ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCC-CCCccccccccCcccceeeeEecCCCceEEeccccc--eeeee
Confidence 4888888999999999999998 4789999997321 2223333332 356789999999999999999976 89999
Q ss_pred ECCCceEEEEecC-CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCC
Q psy10566 377 NIETELLRVKLNH-SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 377 d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~d 452 (604)
|+.......+... ...-.+.+++.+||.+..+++..||.|.|||+. ...++.+.+| .+.|+.+++||..+.+|+-|
T Consensus 493 DLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlD 572 (705)
T KOG0639|consen 493 DLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLD 572 (705)
T ss_pred eccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCc
Confidence 9987765444332 223457789999999999999999999999994 5677889988 59999999999999999999
Q ss_pred CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 453 HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
.+|+.||++.+...........|.++.++|++.++++|..++.+.+......+ ...+.-|.. +|-++-|.+.|+++
T Consensus 573 ntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-kyqlhlheS---cVLSlKFa~cGkwf 648 (705)
T KOG0639|consen 573 NTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-KYQLHLHES---CVLSLKFAYCGKWF 648 (705)
T ss_pred cceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCcc-ceeeccccc---EEEEEEecccCcee
Confidence 99999999998877777778899999999999999999999999888765432 222333433 55566677899999
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
++.+.|+.+..|..--|..+...+ ....|.++..+.+ .++++|||.|..-.||.+
T Consensus 649 vStGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~d-dkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 649 VSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFD-DKYIVTGSGDKKATVYEV 703 (705)
T ss_pred eecCchhhhhhccCccccceeecc-ccCcceeeeeccC-ceEEEecCCCcceEEEEE
Confidence 999999999999999998887776 4578999999998 899999999988888765
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-25 Score=199.08 Aligned_cols=250 Identities=18% Similarity=0.254 Sum_probs=202.5
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
-+.+++|-.|.++|+++.|+|....|++|+.|++|++||+.....+ +..+.+. ...+|.++.|+|.|.+|++|....
T Consensus 162 hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saK-rA~K~~q-d~~~vrsiSfHPsGefllvgTdHp- 238 (430)
T KOG0640|consen 162 HPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAK-RAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHP- 238 (430)
T ss_pred CceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHH-HHHHHhh-ccceeeeEeecCCCceEEEecCCC-
Confidence 3678999999999999999999999999999999999999722111 1122222 457899999999999999988777
Q ss_pred eEEEEEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeee----ceeEEEEEEcCCC
Q psy10566 371 HELWVWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWE----GVRVNCLWCRSDG 443 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~----~~~v~~l~~s~~g 443 (604)
++++||+++.++..... ..|.+.|+++.+++.++..++|+.||.|++||- .++++..+. +..|.+..|..+|
T Consensus 239 -~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~ 317 (430)
T KOG0640|consen 239 -TLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNG 317 (430)
T ss_pred -ceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCC
Confidence 89999999988766554 467889999999999999999999999999996 677776654 3479999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccccCC------CCeeEEEECCCCCEEEEEec-CCeEEEEecCCCceeeEee-cccc
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLLQED------HPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRILLRKFQ-GVTQ 515 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~~~~~~-~~~~ 515 (604)
+++++.+.|..+++|.+.+++........ .--+...|+....+++.-.. .+.+.-||.++...+..+. +|.+
T Consensus 318 kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~ 397 (430)
T KOG0640|consen 318 KYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNG 397 (430)
T ss_pred eEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCC
Confidence 99999999999999999998776655432 12244567777777776544 5679999999987766554 6666
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.++++..+|.+.-++++|.|..+++|-.+
T Consensus 398 ---a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 398 ---AVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred ---CceEEEeCCCCCceeeecccceeeeeeec
Confidence 45556678999999999999999999754
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-24 Score=191.97 Aligned_cols=241 Identities=17% Similarity=0.266 Sum_probs=191.0
Q ss_pred CCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCC-ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q psy10566 346 HTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423 (604)
Q Consensus 346 h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 423 (604)
..+.|.+++|||.. ..+++++.|+ +|++|+++. |....+....|.++|.+++|+.||..+++|+.|+.+++||+..
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~--tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDG--TVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred cccchheeEeccccCceEEecccCC--ceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence 46789999999954 4555778888 899999987 5666666678999999999999999999999999999999965
Q ss_pred Ceeeeeece--eEEEEEEcCCCC--EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 424 QVLDSWEGV--RVNCLWCRSDGK--SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 424 ~~~~~~~~~--~v~~l~~s~~g~--~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
.....+..| +|..+.|-+... .|++|+.|.+|+.||.+.......+.....+.++.+ -...+++++.+..|.+|
T Consensus 104 ~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv--~~pm~vVata~r~i~vy 181 (347)
T KOG0647|consen 104 GQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADV--LYPMAVVATAERHIAVY 181 (347)
T ss_pred CCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhc--cCceeEEEecCCcEEEE
Confidence 555555444 788888887766 899999999999999998877777776777766654 45678999999999999
Q ss_pred ecCCCcee-eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC--cceEEeeCCCC---------CeeEEEE
Q psy10566 500 DLRDRILL-RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE--LPIATLSGHTR---------TVSCVAW 567 (604)
Q Consensus 500 d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~--~~~~~l~~h~~---------~V~~v~~ 567 (604)
+++++... +..... -.+.++++....+..-.+.|+-+|.+.|..+..+ +.-.+|+.|.. .|++|+|
T Consensus 182 nL~n~~te~k~~~Sp--Lk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~F 259 (347)
T KOG0647|consen 182 NLENPPTEFKRIESP--LKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAF 259 (347)
T ss_pred EcCCCcchhhhhcCc--ccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEe
Confidence 99876432 222222 2234444443466666799999999999999887 55567777752 5889999
Q ss_pred cCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 568 NPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 568 sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|. ...|+|+|.||++.+||-+...
T Consensus 260 hP~-hgtlvTaGsDGtf~FWDkdar~ 284 (347)
T KOG0647|consen 260 HPV-HGTLVTAGSDGTFSFWDKDART 284 (347)
T ss_pred ecc-cceEEEecCCceEEEecchhhh
Confidence 998 7899999999999999987654
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-24 Score=203.07 Aligned_cols=251 Identities=22% Similarity=0.375 Sum_probs=191.0
Q ss_pred ccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCc------eeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCC
Q psy10566 298 NDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTF------TCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPED 369 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~------~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~ 369 (604)
--|.+.|+.+.+-|... .+|+++..+.|.|||...... .+.+-..+.+|.+.-++++|++... .|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 34999999999999765 777888999999999873221 3344558899998888999999654 567777776
Q ss_pred ceEEEEEECCCceE------EEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCC
Q psy10566 370 CHELWVWNIETELL------RVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSD 442 (604)
Q Consensus 370 ~~~i~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~ 442 (604)
+|++||+..... ......+|...|..++|++- ...|++
T Consensus 201 --~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~s--------------------------------- 245 (422)
T KOG0264|consen 201 --TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGS--------------------------------- 245 (422)
T ss_pred --cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhhee---------------------------------
Confidence 899999976432 22333467777888888773 334444
Q ss_pred CCEEEEEeCCCeEEEEEcCC--Ccc-cccccCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCC-CceeeEeeccccce
Q psy10566 443 GKSVLAADTHHRIRTYNFEH--LTD-SNLLQEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQ 517 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~--~~~-~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~ 517 (604)
++.|+.+.|||+++ .+. .....|..++.|++|+|-+ ..||+|+.|++|.+||+++ .+++.++.+|...+
T Consensus 246 ------v~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev 319 (422)
T KOG0264|consen 246 ------VGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEV 319 (422)
T ss_pred ------ecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcce
Confidence 44555555666653 121 2234578899999999966 4577788899999999998 45788999999987
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC--------------cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRE--------------LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~--------------~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
+.+. +.+.....+|+++.|+.+.|||+..- +++..-.||...|+.+.|+|..+..++|+++|+.
T Consensus 320 ~~V~--WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~ 397 (422)
T KOG0264|consen 320 FQVE--WSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNI 397 (422)
T ss_pred EEEE--eCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCce
Confidence 7764 33445679999999999999999741 3356667999999999999998999999999999
Q ss_pred EEEECCCC
Q psy10566 584 VRIWGPHL 591 (604)
Q Consensus 584 I~iW~~~~ 591 (604)
+.||++..
T Consensus 398 LqIW~~s~ 405 (422)
T KOG0264|consen 398 LQIWQMAE 405 (422)
T ss_pred EEEeeccc
Confidence 99999973
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=200.99 Aligned_cols=245 Identities=18% Similarity=0.307 Sum_probs=205.4
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE-Ee---------------c-CCCCCCeEEEEEecC
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV-KL---------------N-HSPEDSLTSCSWNRD 403 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~-~~---------------~-~~~~~~v~~~~~~~~ 403 (604)
..+..|.-+|.+++++|++++.++++.++ +|.-|++.+++... .+ . ..|...+.+++.++|
T Consensus 136 ~~~~~H~~s~~~vals~d~~~~fsask~g--~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKRVFSASKDG--TILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred eeeccccCcceEEEeeccccceeecCCCc--ceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence 34455888999999999999999999998 89999998887431 11 1 156678999999999
Q ss_pred CCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-ccccCCCCeeEEE
Q psy10566 404 GTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-NLLQEDHPVMSFT 479 (604)
Q Consensus 404 ~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~ 479 (604)
|++|++|+.|..|.||+. +.+.++.+.+| .|.+++|-.....+++++.|+.|++|++...... .++.|...|..+.
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID 293 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence 999999999999999999 57888888888 6999999999999999999999999999887654 4567899999999
Q ss_pred ECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee-CC
Q psy10566 480 IDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS-GH 558 (604)
Q Consensus 480 ~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~-~h 558 (604)
...-++.+-+|+.|.++++|++.. +....|.++.....++ ++ -+...+++||+||.|.+|++.+.+++.+.. +|
T Consensus 294 aL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv---~~-In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AH 368 (479)
T KOG0299|consen 294 ALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCV---AF-INDEHFVSGSDNGSIALWSLLKKKPLFTSRLAH 368 (479)
T ss_pred hhcccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeE---EE-ecccceeeccCCceEEEeeecccCceeEeeccc
Confidence 999999999999999999999944 3444566665543333 33 456789999999999999999999988764 22
Q ss_pred -----------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 559 -----------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 559 -----------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...|++++..|. ..++|||+.+|.||+|.+..+-
T Consensus 369 gv~~~~~~~~~~~Witsla~i~~-sdL~asGS~~G~vrLW~i~~g~ 413 (479)
T KOG0299|consen 369 GVIPELDPVNGNFWITSLAVIPG-SDLLASGSWSGCVRLWKIEDGL 413 (479)
T ss_pred cccCCccccccccceeeeEeccc-CceEEecCCCCceEEEEecCCc
Confidence 127899999998 8999999999999999999884
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-23 Score=187.62 Aligned_cols=238 Identities=18% Similarity=0.282 Sum_probs=193.9
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL 426 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 426 (604)
...|.++.|+|.+..|++++.|+ ++++||+........+. |..++.+++|.+ ...+++|+.||.|+.+|++....
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDg--slrlYdv~~~~l~~~~~--~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDG--SLRLYDVPANSLKLKFK--HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE 87 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccC--cEEEEeccchhhhhhee--cCCceeeeeccC-CceEEEeccCceEEEEEecCCcc
Confidence 57899999999999999999999 89999999887666665 778999999986 56899999999999999975544
Q ss_pred eeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 427 DSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 427 ~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.....| .+.|+..++....+++|+.|++|++||.+.............|.++.. .++.|++|+.+..|.+||+++.
T Consensus 88 ~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~ 165 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNL 165 (323)
T ss_pred eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEec--cCCEEEEeecCceEEEEEcccc
Confidence 444433 799999999999999999999999999998655555555667777665 5788999999999999999986
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC----cceEEeeCCC---------CCeeEEEEcCCC
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE----LPIATLSGHT---------RTVSCVAWNPVY 571 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~----~~~~~l~~h~---------~~V~~v~~sp~~ 571 (604)
....... ...-.+.++++..-|++.=.+++|-||+|.+=.++.. +.-..|+.|. .+|++++|+|-
T Consensus 166 ~~~~q~r-eS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~- 243 (323)
T KOG1036|consen 166 DEPFQRR-ESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPI- 243 (323)
T ss_pred cchhhhc-cccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccc-
Confidence 5543221 2223445566555578888899999999998776655 4556777774 27999999999
Q ss_pred CcEEEEEeCCCcEEEECCCCCC
Q psy10566 572 HQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...|||||.||.|.+||+.+.+
T Consensus 244 ~~tfaTgGsDG~V~~Wd~~~rK 265 (323)
T KOG1036|consen 244 HGTFATGGSDGIVNIWDLFNRK 265 (323)
T ss_pred cceEEecCCCceEEEccCcchh
Confidence 7899999999999999998876
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=201.44 Aligned_cols=243 Identities=17% Similarity=0.267 Sum_probs=199.9
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.+++.--++.|.++.|-.||++||.|...|.|+|||.. +...+..+.+|+.+|..+.|+|+++.+++.+.|+ ..+
T Consensus 61 ~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k----~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd-~v~ 135 (487)
T KOG0310|consen 61 RKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK----SRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDD-KVV 135 (487)
T ss_pred hhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccc----cHHHHHHHhhccCceeEEEecccCCeEEEecCCC-ceE
Confidence 34455567899999999999999999999999999976 4456778899999999999999887776666665 489
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCC--Ceeeee-eceeEEEEEEcCCCCEEEEE
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEG--QVLDSW-EGVRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~--~~~~~~-~~~~v~~l~~s~~g~~l~~~ 449 (604)
++||+.+......+ .+|++.|.|.+|+|- +..+++|+.||.|++||++. ..+.++ ++++|..+.+-|.|..++++
T Consensus 136 k~~d~s~a~v~~~l-~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasA 214 (487)
T KOG0310|consen 136 KYWDLSTAYVQAEL-SGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASA 214 (487)
T ss_pred EEEEcCCcEEEEEe-cCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEc
Confidence 99999998864344 489999999999994 56899999999999999953 444444 45699999999999988877
Q ss_pred eCCCeEEEEEcCCC-ccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 450 DTHHRIRTYNFEHL-TDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 450 ~~dg~I~i~d~~~~-~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+. ..|++||+.++ ..... ..|...|+|+.+..++..|++++-|+.|++||+.+.+.+..+.-.. .+-++..+|
T Consensus 215 gG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~----pvLsiavs~ 289 (487)
T KOG0310|consen 215 GG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPG----PVLSIAVSP 289 (487)
T ss_pred CC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeeccc----ceeeEEecC
Confidence 64 57999999854 33333 3488999999999999999999999999999998888887776433 345566679
Q ss_pred CCcEEEEEeCCCcEEEEeCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~ 547 (604)
+++.++.|-.||.+.+=+..
T Consensus 290 dd~t~viGmsnGlv~~rr~~ 309 (487)
T KOG0310|consen 290 DDQTVVIGMSNGLVSIRRRE 309 (487)
T ss_pred CCceEEEecccceeeeehhh
Confidence 99999999999988776543
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=208.66 Aligned_cols=293 Identities=15% Similarity=0.225 Sum_probs=209.7
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEE--CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGS--KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs--~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
+.+..|..+++|++||++|+|+|+|- ....++||++. ....+..+..|...|+|++|+|.++|+++.|...+..
T Consensus 72 hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la----~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMI 147 (1080)
T KOG1408|consen 72 HLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLA----FHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMI 147 (1080)
T ss_pred heecccCcceeEEEEcCCCcEEEecccCCCccceeeeec----cccchhhhhhccccceeeeecCCCcEEEeeccccceE
Confidence 45667888999999999999999985 55679999998 5557888999999999999999999999999877778
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-----------------------------------------
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG----------------------------------------- 411 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------------------------------------- 411 (604)
|.+||.+.......- .-...|..++|+.||.++++++
T Consensus 148 Vnv~dWr~N~~~asn--kiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaC 225 (1080)
T KOG1408|consen 148 VNVNDWRVNSSGASN--KISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVAC 225 (1080)
T ss_pred EEhhhhhhccccccc--ccceeEEEEEEccCCceeeeeeeeeEEEEEeeccccccCCccccchhhhccccccchhhhhhh
Confidence 888876543221111 1223455555555555555544
Q ss_pred ----------------------------------------------------cCCeEEEEEcCC-----Ceeee------
Q psy10566 412 ----------------------------------------------------IRGQFYQCDIEG-----QVLDS------ 428 (604)
Q Consensus 412 ----------------------------------------------------~dg~i~iwd~~~-----~~~~~------ 428 (604)
.+|.|++|+... ...+.
T Consensus 226 g~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d 305 (1080)
T KOG1408|consen 226 GVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSD 305 (1080)
T ss_pred cCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcchhhhccccccccccccc
Confidence 444444443210 00000
Q ss_pred ----------eec------eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----ccccccCCCCeeEEEECCC-----
Q psy10566 429 ----------WEG------VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT----DSNLLQEDHPVMSFTIDAT----- 483 (604)
Q Consensus 429 ----------~~~------~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~----~~~~~~~~~~i~~~~~s~~----- 483 (604)
+.. .....+.|++...++.+...|..+++||++... ....+.|...|..+..-|.
T Consensus 306 ~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~ 385 (1080)
T KOG1408|consen 306 TANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSP 385 (1080)
T ss_pred hhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCc
Confidence 000 013456778888888888999999999998743 3344556666666654441
Q ss_pred ------CCEEEEEecCCeEEEEecCCCceeeEe--------------e--------------------ccccceEEEEee
Q psy10566 484 ------DRLALLNVSTQGVHLWDLRDRILLRKF--------------Q--------------------GVTQGQFTIHSC 523 (604)
Q Consensus 484 ------~~~l~~~~~dg~I~lwd~~~~~~~~~~--------------~--------------------~~~~~~~~i~~~ 523 (604)
...+++++.|++|++||+..+..-..+ . ..-...+.++++
T Consensus 386 ~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~ 465 (1080)
T KOG1408|consen 386 TAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRAL 465 (1080)
T ss_pred ccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEE
Confidence 234889999999999999763111110 0 001123457788
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC--CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV--YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~--~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..+|+|++||+|..-|+++||++..-+....+.+|+..|.|+.|+.- +..+||+++.|.-|.|+|+...-
T Consensus 466 ~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny 537 (1080)
T KOG1408|consen 466 AVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY 537 (1080)
T ss_pred EECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc
Confidence 88999999999999999999999999999999999999999999853 24789999999999999997654
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-23 Score=204.19 Aligned_cols=293 Identities=20% Similarity=0.338 Sum_probs=234.4
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe---ccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL---EGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l---~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
..+.||.+.|.++.|+|.+..|+++|.|.++.||..+..++-......+ .+...+....-|+|+++.+++-+..|
T Consensus 261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~G-- 338 (764)
T KOG1063|consen 261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTG-- 338 (764)
T ss_pred hhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccC--
Confidence 3466999999999999999999999999999999988555444443333 34456789999999999999988887
Q ss_pred EEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee-------eeeceeEEEEEEcCC
Q psy10566 372 ELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD-------SWEGVRVNCLWCRSD 442 (604)
Q Consensus 372 ~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~~~~~v~~l~~s~~ 442 (604)
-.++|...... .......+|.+.|++++|+|.|.++++.+.|.+-++|-.-|+... ..+|+..+|+++-+.
T Consensus 339 g~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~ 418 (764)
T KOG1063|consen 339 GFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNE 418 (764)
T ss_pred cEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccC
Confidence 79999833321 233344589999999999999999999999999999877533221 234667999999997
Q ss_pred CCEEEEEeCCCeEEEEEcC-------------------------------------------CC----------------
Q psy10566 443 GKSVLAADTHHRIRTYNFE-------------------------------------------HL---------------- 463 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~-------------------------------------------~~---------------- 463 (604)
...+++|.....+++|+.. ++
T Consensus 419 ~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~ 498 (764)
T KOG1063|consen 419 DLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPC 498 (764)
T ss_pred CceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCch
Confidence 7778888888889999851 00
Q ss_pred ------------------cccccccCCCCeeEEEECCCCCEEEEEecCC-----eEEEEecCCCceeeEeeccccceEEE
Q psy10566 464 ------------------TDSNLLQEDHPVMSFTIDATDRLALLNVSTQ-----GVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 464 ------------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
+...+++|...|.+++.+|+++++++++... .|++|+..+...+..+.+|.- .+
T Consensus 499 ~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsL---TV 575 (764)
T KOG1063|consen 499 ELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSL---TV 575 (764)
T ss_pred hccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccce---EE
Confidence 0112244567899999999999999998754 499999999988888988887 45
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCc----ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKREL----PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~----~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.-+.|+|||++|++.|.|.++.+|...... .....+.|..-|.+..|+|+ ..+|||+|.|.+|+||.....+
T Consensus 576 T~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pd-e~~FaTaSRDK~VkVW~~~~~~ 651 (764)
T KOG1063|consen 576 TRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPD-EKYFATASRDKKVKVWEEPDLR 651 (764)
T ss_pred EEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcc-cceeEEecCCceEEEEeccCch
Confidence 556778999999999999999999886432 23346789999999999999 7889999999999999988773
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-23 Score=210.00 Aligned_cols=276 Identities=14% Similarity=0.199 Sum_probs=218.1
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd 377 (604)
.+|+..-+.++|.|+|.+|.+++.||.|++|+..... ....++..+...|.+++.. +.+|++++.++ +|.+|.
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~---e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~--tv~~y~ 82 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDE---EEPETIDISGELVSSIACY--SNHFLTGSEQN--TVLRYK 82 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcc---cCCchhhccCceeEEEeec--ccceEEeeccc--eEEEee
Confidence 4699999999999999999999999999999987321 2223333366777777764 45899999998 899999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCe
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHR 454 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~ 454 (604)
..++..-..+. ...-++.+++|+-+|++++.|+.|-.|++.++ +....+.+.+| +|.++.++|.+++|++.+.||.
T Consensus 83 fps~~~~~iL~-Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~ 161 (933)
T KOG1274|consen 83 FPSGEEDTILA-RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGK 161 (933)
T ss_pred CCCCCccceee-eeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCce
Confidence 88776432222 23367999999999999999999999999998 56666677776 7999999999999999999999
Q ss_pred EEEEEcCCCcccccccC---------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC
Q psy10566 455 IRTYNFEHLTDSNLLQE---------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~---------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~ 525 (604)
|++||+.++.....+.. ...+..++|+|++..+++.+.|+.|++|+..+......+........ +..+.|
T Consensus 162 v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~-~~~~~w 240 (933)
T KOG1274|consen 162 VQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSK-FSDLQW 240 (933)
T ss_pred EEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccc-eEEEEE
Confidence 99999998766554432 34567899999999999999999999999999988888875444332 566788
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
+|+|.|||+++.||.|.|||.++-.. ......|.+++|.|+ .+.+-.-..-|+.-+|
T Consensus 241 sPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~-~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 241 SPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKPN-ANAITLITALGTLGVS 297 (933)
T ss_pred cCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCCC-CCeeEEEeeccccccC
Confidence 99999999999999999999998221 222468999999998 5555444444444444
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=202.98 Aligned_cols=270 Identities=17% Similarity=0.289 Sum_probs=203.9
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC--------ceeEeeE
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT--------FTCQHRK 341 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~--------~~~~~~~ 341 (604)
++++|....+||.......++. ..+....-...|.+++||+.|..|++.+.....+|+|-+... ....-+.
T Consensus 184 sGs~Dy~v~~wDf~gMdas~~~-fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~ 262 (641)
T KOG0772|consen 184 SGSLDYTVKFWDFQGMDASMRS-FRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMY 262 (641)
T ss_pred eccccceEEEEecccccccchh-hhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhh
Confidence 6777888999998766544443 222223344579999999999988888888899999976110 0111123
Q ss_pred EeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEe-----cCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 342 TLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKL-----NHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
.-+||...++|.+|+|+. ..+++++.|+ ++++||+.+.+....+ ..+..-+++.|+|+++|+.|++|+.||.
T Consensus 263 nTKGHia~lt~g~whP~~k~~FlT~s~Dg--tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGS 340 (641)
T KOG0772|consen 263 NTKGHIAELTCGCWHPDNKEEFLTCSYDG--TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGS 340 (641)
T ss_pred ccCCceeeeeccccccCcccceEEecCCC--cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCc
Confidence 456899999999999976 4688999998 8999999875422211 2244557899999999999999999999
Q ss_pred EEEEEcCCCee------eeee--ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc----ccCCCCeeEEEECCC
Q psy10566 416 FYQCDIEGQVL------DSWE--GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL----LQEDHPVMSFTIDAT 483 (604)
Q Consensus 416 i~iwd~~~~~~------~~~~--~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~----~~~~~~i~~~~~s~~ 483 (604)
|.+|+..+..+ +.-+ +..|+|+.|+++|++|++-+.|+++++||++..+.... +....+-+.++|+|+
T Consensus 341 IQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd 420 (641)
T KOG0772|consen 341 IQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPD 420 (641)
T ss_pred eeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCC
Confidence 99999843222 1111 22699999999999999999999999999998653322 223567889999999
Q ss_pred CCEEEEEec------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 484 DRLALLNVS------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 484 ~~~l~~~~~------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
.+++++|++ .|.+.+||..+...+.++.-... .+..|.|+|.-+.|+.|+.||.++||=
T Consensus 421 ~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~a---Svv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 421 DKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTA---SVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred ceEEEecccccCCCCCceEEEEeccceeeEEEecCCCc---eEEEEeecchhhheeeecCCCceEEEE
Confidence 999999875 46799999999888888765533 344456678888999999999999974
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=185.43 Aligned_cols=246 Identities=17% Similarity=0.230 Sum_probs=194.0
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCCceEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPEDCHEL 373 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~~~~i 373 (604)
+-..|.+.|..+...--|++|||++.|++|+|+.+.... ....+.+|.||.++|..++|.. -|..|++|+.|+ .|
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~-~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDg--kV 82 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNG-QSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDG--KV 82 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCC-CceeeeEecCCCCCeeEEeecccccCcEeeEeecCc--eE
Confidence 456799999999999999999999999999999998433 2477899999999999999966 799999999999 89
Q ss_pred EEEECCCceEEEEec-CCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEcCCC------eeeeeeceeEEEEEEcCC--
Q psy10566 374 WVWNIETELLRVKLN-HSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDIEGQ------VLDSWEGVRVNCLWCRSD-- 442 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~v~~l~~s~~-- 442 (604)
.+|.-++++...... ..|...|++++|.| -|-.|++++.||.|.+.+.+.. .+..-+...++++++.|.
T Consensus 83 IiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~ 162 (299)
T KOG1332|consen 83 IIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASA 162 (299)
T ss_pred EEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCC
Confidence 999999885433322 36888999999999 4578999999999999988532 222222336888998886
Q ss_pred -C-----------CEEEEEeCCCeEEEEEcCCC---cccccccCCCCeeEEEECCCC----CEEEEEecCCeEEEEecCC
Q psy10566 443 -G-----------KSVLAADTHHRIRTYNFEHL---TDSNLLQEDHPVMSFTIDATD----RLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 443 -g-----------~~l~~~~~dg~I~i~d~~~~---~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~I~lwd~~~ 503 (604)
| +.|++|+.|..|+||+.... ....+..|...|..+++.|.- ..|++++.||++.||..+.
T Consensus 163 ~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~ 242 (299)
T KOG1332|consen 163 PGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDE 242 (299)
T ss_pred CccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecC
Confidence 4 56999999999999999884 233355688999999999975 5799999999999998763
Q ss_pred Ccee---eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 504 RILL---RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 504 ~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.... ..+..... .+-.+.++..|++|+.++.|+.|.+|.-.
T Consensus 243 e~e~wk~tll~~f~~---~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 243 EYEPWKKTLLEEFPD---VVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred ccCcccccccccCCc---ceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 2111 11111222 33345667899999999999999999754
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-22 Score=183.98 Aligned_cols=261 Identities=20% Similarity=0.317 Sum_probs=190.7
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCCceEEEE
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~~~~i~v 375 (604)
.+|.+-|.|+.|.+.|+.+|||+.|++|+|||.+..+++..+....+.|.+.|..+.|.+ -|+.+++|+.|+ ++.+
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Dr--tv~i 87 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDR--TVSI 87 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCC--ceee
Confidence 579999999999999999999999999999999888889999999999999999999965 489999999999 8999
Q ss_pred EECCCc-------e-EEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEc-CCCeeeeeece-eEEEEEEcCCC
Q psy10566 376 WNIETE-------L-LRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RVNCLWCRSDG 443 (604)
Q Consensus 376 wd~~~~-------~-~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g 443 (604)
|.-... + ...+........|+++.|.| -|-.+++++.||.+++|+. +-..+..|.-. .+..+. .|-
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~-~pp- 165 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVI-DPP- 165 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhcc-CCc-
Confidence 976211 1 11222224567799999998 5678888888888888876 22222222210 000000 010
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCC---CCEEEEEecC-----CeEEEEecCCC----ceeeEee
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT---DRLALLNVST-----QGVHLWDLRDR----ILLRKFQ 511 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~d-----g~I~lwd~~~~----~~~~~~~ 511 (604)
-.+..+..|+.|+|. ..++++|+.+ +.++||....+ ..+.++.
T Consensus 166 -------------------------~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~ 220 (361)
T KOG2445|consen 166 -------------------------GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELP 220 (361)
T ss_pred -------------------------ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcC
Confidence 112445667777764 3567777765 46888876543 2445666
Q ss_pred ccccceEEEEeeeCCCC----CcEEEEEeCCCcEEEEeCCCC--------------------cceEEeeCCCCCeeEEEE
Q psy10566 512 GVTQGQFTIHSCFGGAN----QDFVASGSEDGKVYIWHVKRE--------------------LPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~----~~~l~sgs~dg~I~iwd~~~~--------------------~~~~~l~~h~~~V~~v~~ 567 (604)
+|+..+..+. |.|+ -.+||+++.|| |+||+++.. +.+..+.+|.+.|..+.|
T Consensus 221 d~~dpI~di~---wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~w 296 (361)
T KOG2445|consen 221 DHTDPIRDIS---WAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRW 296 (361)
T ss_pred CCCCcceeee---eccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEE
Confidence 7777655553 3343 35899999999 999998731 235567789999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 568 NPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 568 sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+-. +.+|+|.|+||.||+|...-.
T Consensus 297 Nmt-GtiLsStGdDG~VRLWkany~ 320 (361)
T KOG2445|consen 297 NMT-GTILSSTGDDGCVRLWKANYN 320 (361)
T ss_pred eee-eeEEeecCCCceeeehhhhhh
Confidence 998 899999999999999987543
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=208.60 Aligned_cols=315 Identities=17% Similarity=0.180 Sum_probs=238.9
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+++-|.....|+.......+..+.+..++.|.+.|..++...+|+.|+++|.|-+|++|+..... .-+..++..|.+-
T Consensus 42 TgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~--~~c~stir~H~DY 119 (735)
T KOG0308|consen 42 TGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN--TFCMSTIRTHKDY 119 (735)
T ss_pred ecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc--chhHhhhhcccch
Confidence 34446677777765555444455688999999999999999999999999999999999998322 3567888899999
Q ss_pred eeEEEE-CCCCCeEEEEeCCCceEEEEEECCCceE--EE--------EecCCCCCCeEEEEEecCCCEEEEEecCCeEEE
Q psy10566 350 VAYLAW-SPDSSHLLVVGPEDCHELWVWNIETELL--RV--------KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ 418 (604)
Q Consensus 350 V~~l~~-spd~~~l~s~~~d~~~~i~vwd~~~~~~--~~--------~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 418 (604)
|.|+++ .++...+++||-|+ .|.+||++++.. .. ....++..+|++++-++.|..|++|+..+.+++
T Consensus 120 Vkcla~~ak~~~lvaSgGLD~--~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~ 197 (735)
T KOG0308|consen 120 VKCLAYIAKNNELVASGGLDR--KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRL 197 (735)
T ss_pred heeeeecccCceeEEecCCCc--cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEE
Confidence 999999 88889999999998 899999998732 22 222267788999999999999999999999999
Q ss_pred EEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCC
Q psy10566 419 CDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 419 wd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg 494 (604)
||. .++.+..+.+| .|.++..++||..++++++||+|++||+...++... ..|...+.++..+|+-.++++|+.||
T Consensus 198 wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~ 277 (735)
T KOG0308|consen 198 WDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDG 277 (735)
T ss_pred eccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCC
Confidence 999 46677777788 699999999999999999999999999998776554 44777899999999999999999999
Q ss_pred eEEEEecCCCc-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-------CcceEEeeC---------
Q psy10566 495 GVHLWDLRDRI-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-------ELPIATLSG--------- 557 (604)
Q Consensus 495 ~I~lwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-------~~~~~~l~~--------- 557 (604)
.|..=|+++.. ....++ ...+ +..+......+-+.+++.|+.|+-|...- +.+......
T Consensus 278 ~i~~Tdl~n~~~~tlick-~daP---v~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~ 353 (735)
T KOG0308|consen 278 NIYRTDLRNPAKSTLICK-EDAP---VLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLT 353 (735)
T ss_pred cEEecccCCchhheEeec-CCCc---hhhhhhccccCCceeeeccccceecCCccccccccCCCCCcccccCCCcccccc
Confidence 99999999843 222222 1111 11122222233447778899999987642 111111100
Q ss_pred --C------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 558 --H------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 558 --h------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
| ..+|..-+.-.+ .+.++|-...|.+.+||+-...
T Consensus 354 ~tp~~vi~Gg~ai~k~~mL~d-kRhVlTkDa~gnv~lwDIl~~~ 396 (735)
T KOG0308|consen 354 NTPDSVIPGGAAIKKHAMLND-KRHVLTKDAKGNVALWDILACV 396 (735)
T ss_pred CCCceeccCchhhhhhhhhcC-cceEeeecCCCCEEEEEeeeee
Confidence 0 012223333344 7889999999999999986544
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-22 Score=183.62 Aligned_cols=286 Identities=16% Similarity=0.249 Sum_probs=221.0
Q ss_pred ccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCc------eeEee-----EEeccCCCCeeEEEECCCCC-eEEE
Q psy10566 298 NDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTF------TCQHR-----KTLEGHTLGVAYLAWSPDSS-HLLV 364 (604)
Q Consensus 298 ~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~------~~~~~-----~~l~~h~~~V~~l~~spd~~-~l~s 364 (604)
.-|.+.|+++...+ .|+|+++|+.||.|.|||++..+. ..+.. ..-.+|...|..+.|-|-+. .+.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 34889999999988 588999999999999999983321 11111 11236888999999999554 5566
Q ss_pred EeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC---CCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEE
Q psy10566 365 VGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD---GTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLW 438 (604)
Q Consensus 365 ~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~ 438 (604)
++.|. ++++||..+-+....+. ..+.|++-+++|- ...+++|..+-.|+++|+ .|.....+.+| .|.++.
T Consensus 120 sSFDh--tlKVWDtnTlQ~a~~F~--me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~ 195 (397)
T KOG4283|consen 120 SSFDH--TLKVWDTNTLQEAVDFK--MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVE 195 (397)
T ss_pred ccccc--eEEEeecccceeeEEee--cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEE
Confidence 66677 89999999998877776 4577999999993 446777888889999999 68888899998 599999
Q ss_pred EcCCCCE-EEEEeCCCeEEEEEcCCCc-c-----------c----ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 439 CRSDGKS-VLAADTHHRIRTYNFEHLT-D-----------S----NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 439 ~s~~g~~-l~~~~~dg~I~i~d~~~~~-~-----------~----~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
|+|...+ +++|+.||.|++||++... + . ....|.+.+..++|+.++.++++++.|..+++|+.
T Consensus 196 Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~ 275 (397)
T KOG4283|consen 196 WSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM 275 (397)
T ss_pred eccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence 9998776 6788999999999997531 1 1 12235678999999999999999999999999999
Q ss_pred CCCceeeEeec---cc---cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 502 RDRILLRKFQG---VT---QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 502 ~~~~~~~~~~~---~~---~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
.+|+....-.+ |. .....+. +.+...++---.++.+.++++-+|..+..+.+|-..|.|.++-|+ -...
T Consensus 276 ~~G~ntl~~~g~~~~n~~~~~~~~~~----~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~-fq~~ 350 (397)
T KOG4283|consen 276 ESGRNTLREFGPIIHNQTTSFAVHIQ----SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPD-FEQC 350 (397)
T ss_pred ccCcccccccccccccccccceEEEe----ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCc-hhhh
Confidence 88754322111 11 1111222 123334444456699999999999999999999999999999998 7889
Q ss_pred EEEeCCCcEEEECCCCC
Q psy10566 576 ASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~~ 592 (604)
.+++.|+.|..|-+...
T Consensus 351 ~tg~~d~ni~~w~p~l~ 367 (397)
T KOG4283|consen 351 FTGDMNGNIYMWSPALK 367 (397)
T ss_pred hccccCCcccccccccc
Confidence 99999999999988443
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=198.56 Aligned_cols=268 Identities=16% Similarity=0.180 Sum_probs=212.6
Q ss_pred CeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 314 LKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 314 ~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
.+++++.. -..+.+|.+. +........--.++|.+++-+|+|.+|+.++..+ .+++|.+.+|..+..+. .|-
T Consensus 51 ~yllsaq~~rp~l~vw~i~----k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g--~lYlWelssG~LL~v~~-aHY 123 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEIL----KKDQVVQYIVLPGPVHALASSNLGYFLLAGTISG--NLYLWELSSGILLNVLS-AHY 123 (476)
T ss_pred hheeeecccCccccccccC----chhhhhhhcccccceeeeecCCCceEEEeecccC--cEEEEEeccccHHHHHH-hhc
Confidence 56666653 3468999987 2222222222457899999999999998887877 79999999999888774 788
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcC----------CCeeeeeece--eEEEEEEcCC--CCEEEEEeCCCeEEEE
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE----------GQVLDSWEGV--RVNCLWCRSD--GKSVLAADTHHRIRTY 458 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~----------~~~~~~~~~~--~v~~l~~s~~--g~~l~~~~~dg~I~i~ 458 (604)
..|+++.|+.||.+|++|+.||.|.+|.+. .+.+..|..| .|+++.+.+. ..++++++.|.++++|
T Consensus 124 Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~w 203 (476)
T KOG0646|consen 124 QSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLW 203 (476)
T ss_pred cceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEE
Confidence 999999999999999999999999999862 2566777777 7999888776 4579999999999999
Q ss_pred EcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC----------------ceeeEeeccccceEEEEe
Q psy10566 459 NFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR----------------ILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 459 d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~----------------~~~~~~~~~~~~~~~i~~ 522 (604)
|+..+.....+.....+.+++++|.+..+++|+.+|.|.+.++... ..+..+.||... ..|.+
T Consensus 204 dlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~-~~ITc 282 (476)
T KOG0646|consen 204 DLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENE-SAITC 282 (476)
T ss_pred EeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCC-cceeE
Confidence 9999988888888999999999999999999999999999887542 234455566652 35666
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+..+.||..|++|+.||.|+|||+.+.++++++..-.++|+.+.+.|-....+..-+....+-.|++
T Consensus 283 Lais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~l 349 (476)
T KOG0646|consen 283 LAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGIILFEHKQPSLPNPHL 349 (476)
T ss_pred EEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccccceecccccCccCCchHh
Confidence 7778999999999999999999999999999988778999999997652223332233333444443
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-21 Score=168.18 Aligned_cols=251 Identities=13% Similarity=0.190 Sum_probs=193.7
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE------CCCc--------eEEEEecCCCCCCeEEEEEec
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN------IETE--------LLRVKLNHSPEDSLTSCSWNR 402 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd------~~~~--------~~~~~~~~~~~~~v~~~~~~~ 402 (604)
+..+..+. ....|.+++|+|.|...++++... ++++.. ++.+ ....+-...|.+.|.|.+|+|
T Consensus 23 f~~i~~l~-dsqairav~fhp~g~lyavgsnsk--t~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 23 FEAINILE-DSQAIRAVAFHPAGGLYAVGSNSK--TFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred eEEEEEec-chhheeeEEecCCCceEEeccCCc--eEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 44455555 567899999999999999999888 555543 2221 233444567899999999999
Q ss_pred CCCEEEEEecCCeEEEEEcCCC--------eeeeeeceeEEEEEEcCC----CCEEEEEe-CCCeEEEEEcCCCcccccc
Q psy10566 403 DGTKFVCGGIRGQFYQCDIEGQ--------VLDSWEGVRVNCLWCRSD----GKSVLAAD-THHRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 403 ~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~v~~l~~s~~----g~~l~~~~-~dg~I~i~d~~~~~~~~~~ 469 (604)
+|..+++|+.|.+|++.-++.. .....+...|..++|..+ +..+++++ .|..|++-|...+.....+
T Consensus 100 ~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~ 179 (350)
T KOG0641|consen 100 CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHAL 179 (350)
T ss_pred ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceee
Confidence 9999999999999999866321 122333447899998654 34455443 3566888888777655444
Q ss_pred -cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc----cceEEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 470 -QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT----QGQFTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 470 -~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
.|.+.|.++ ++.++-.+++|+.|.+|++||++-..++.++.... -....+..++..|.|+++++|-.|....+|
T Consensus 180 sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~ly 258 (350)
T KOG0641|consen 180 SGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLY 258 (350)
T ss_pred cCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEE
Confidence 455666554 56688999999999999999999988887765321 123456667778999999999999999999
Q ss_pred eCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 545 HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
|++.+.+++.+..|...|.+|.|+|. ..++.+|+.|..|++-|+...
T Consensus 259 dirg~r~iq~f~phsadir~vrfsp~-a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 259 DIRGGRMIQRFHPHSADIRCVRFSPG-AHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred EeeCCceeeeeCCCccceeEEEeCCC-ceEEEEecccceEEEeecccc
Confidence 99999999999999999999999998 899999999999999998754
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=194.44 Aligned_cols=263 Identities=19% Similarity=0.310 Sum_probs=205.3
Q ss_pred EECCC-eEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeE
Q psy10566 319 GSKDT-TVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT 396 (604)
Q Consensus 319 gs~dg-~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~ 396 (604)
++.|. ++.+||+. ++....++++. ...-.++..- .+.+++++.... ..+.+|.+......... .-..++|.
T Consensus 13 sS~d~~~~~~~dl~----TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~r-p~l~vw~i~k~~~~~q~-~v~Pg~v~ 85 (476)
T KOG0646|consen 13 SSFDPINCIVWDLR----TGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKR-PLLHVWEILKKDQVVQY-IVLPGPVH 85 (476)
T ss_pred cCCCCcceeEEecC----CCceeEEecCcccccchhhhhh-chhheeeecccC-ccccccccCchhhhhhh-ccccccee
Confidence 34444 59999998 44445555543 1111111111 236788877765 48999998766544411 12457899
Q ss_pred EEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---------c
Q psy10566 397 SCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL---------T 464 (604)
Q Consensus 397 ~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~---------~ 464 (604)
+++-+|+|.+++.|+..|.+++|.+ .|..+..+..| .|+|+.|+.||.++++|+.||.|.+|++... +
T Consensus 86 al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~ 165 (476)
T KOG0646|consen 86 ALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVK 165 (476)
T ss_pred eeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcc
Confidence 9999999999999999999999999 68888888887 7999999999999999999999999987431 1
Q ss_pred -ccccccCCCCeeEEEECCC--CCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE
Q psy10566 465 -DSNLLQEDHPVMSFTIDAT--DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541 (604)
Q Consensus 465 -~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I 541 (604)
....-.|.-+|+.+.+.+. ...+++++.|.++++||+..+..+.++.... .+.++..+|.+..+++|+++|.|
T Consensus 166 p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~----si~av~lDpae~~~yiGt~~G~I 241 (476)
T KOG0646|consen 166 PLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPS----SIKAVALDPAERVVYIGTEEGKI 241 (476)
T ss_pred ceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCC----cceeEEEcccccEEEecCCcceE
Confidence 1223346778999888765 4689999999999999999999888876543 46667778999999999999999
Q ss_pred EEEeCCC----------------CcceEEeeCCCC--CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 542 YIWHVKR----------------ELPIATLSGHTR--TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 542 ~iwd~~~----------------~~~~~~l~~h~~--~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+.++.. +..+..+.||.+ .|+|++.+-| +.+|++|+.||.|+|||+.+.+
T Consensus 242 ~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~D-gtlLlSGd~dg~VcvWdi~S~Q 310 (476)
T KOG0646|consen 242 FQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTD-GTLLLSGDEDGKVCVWDIYSKQ 310 (476)
T ss_pred EeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecC-ccEEEeeCCCCCEEEEecchHH
Confidence 9988753 234566789987 9999999999 8999999999999999998764
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-24 Score=195.62 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=202.3
Q ss_pred eeEEeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 339 HRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 339 ~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
.+..+.||.++|.|++=+|.. ..+++|+.|| .|++||+.+..+...+. .|.+.|..+++.. ..+++++.|.+|+
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG--~VkiWnlsqR~~~~~f~-AH~G~V~Gi~v~~--~~~~tvgdDKtvK 132 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDG--EVKIWNLSQRECIRTFK-AHEGLVRGICVTQ--TSFFTVGDDKTVK 132 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCc--eEEEEehhhhhhhheee-cccCceeeEEecc--cceEEecCCccee
Confidence 456678999999999999987 7899999998 89999999999888887 7899999999987 7899999999999
Q ss_pred EEEcCCCeeeeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEE-EEecCC
Q psy10566 418 QCDIEGQVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLAL-LNVSTQ 494 (604)
Q Consensus 418 iwd~~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~-~~~~dg 494 (604)
.|.+++..+.++.+. .+..+.-+..+..+++++. .|.|||.....+...+. ....|.++.|+|....++ ++.+|+
T Consensus 133 ~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDr 210 (433)
T KOG0268|consen 133 QWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDR 210 (433)
T ss_pred eeeccCCcceeeeccccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCC
Confidence 999999877777665 4556666666666776654 59999998776666555 456799999999876555 555999
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCCCCc
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQ 573 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~~~~ 573 (604)
.|.+||++.+.+++++..... ...++|+|.+..+++|++|..++.||++. ..++....+|.+.|.+|.|||. |.
T Consensus 211 sIvLyD~R~~~Pl~KVi~~mR----TN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfspt-G~ 285 (433)
T KOG0268|consen 211 SIVLYDLRQASPLKKVILTMR----TNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPT-GQ 285 (433)
T ss_pred ceEEEecccCCccceeeeecc----ccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCC-cc
Confidence 999999999998887653322 12245568888899999999999999986 5678888999999999999999 89
Q ss_pred EEEEEeCCCcEEEECCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~ 593 (604)
-|+|||.|.+|+||.++.+.
T Consensus 286 EfvsgsyDksIRIf~~~~~~ 305 (433)
T KOG0268|consen 286 EFVSGSYDKSIRIFPVNHGH 305 (433)
T ss_pred hhccccccceEEEeecCCCc
Confidence 99999999999999998775
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-22 Score=191.33 Aligned_cols=296 Identities=12% Similarity=0.151 Sum_probs=224.3
Q ss_pred ceeecccCCCcEEEEEEcCCC--CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDG--LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPED 369 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg--~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~ 369 (604)
...+.+-|.+.|++++|+|.. +++|+|..-|.|-+||+........-+..+..|..+|.++.|+|.+ ..+++.+.||
T Consensus 178 ~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDG 257 (498)
T KOG4328|consen 178 ILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDG 257 (498)
T ss_pred ecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCc
Confidence 345566789999999999965 4899999999999999953333444567788899999999999954 5788899998
Q ss_pred ceEEEEEECCCceEEEEecC-CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeee--ceeEEEEEEcCCC-
Q psy10566 370 CHELWVWNIETELLRVKLNH-SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWE--GVRVNCLWCRSDG- 443 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~--~~~v~~l~~s~~g- 443 (604)
+|++-|++++.....+.. .....+.++.|+.+...++.+..-|.+.+||.+ +.....+. ..+|..++++|-.
T Consensus 258 --tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p 335 (498)
T KOG4328|consen 258 --TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCP 335 (498)
T ss_pred --eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCc
Confidence 899999988753322221 234557788899888888888888899999984 44343333 3389999999964
Q ss_pred CEEEEEeCCCeEEEEEcCCCcc-----cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC----CCceeeEeeccc
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTD-----SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR----DRILLRKFQGVT 514 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~----~~~~~~~~~~~~ 514 (604)
.++++++.|++.+|||++.... ...+.|...|.+..|||.+..|++.+.|..|+|||.. ...+..++....
T Consensus 336 ~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~ 415 (498)
T KOG4328|consen 336 WFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNN 415 (498)
T ss_pred hheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccC
Confidence 5688999999999999987432 3456688999999999999999999999999999983 333444443221
Q ss_pred ---cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC-CeeE-EEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 515 ---QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR-TVSC-VAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 515 ---~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~-~V~~-v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
.....+. +.|.|+.++|++|-.-..|-|+|-..++.+..+..... .|.+ ..|||.+..+++-++..|.|.||.-
T Consensus 416 ~t~RwlT~fK-A~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 416 RTGRWLTPFK-AAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred cccccccchh-heeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEec
Confidence 2223334 34568999999999999999999999888888765543 5555 4799983335666666789999975
Q ss_pred CC
Q psy10566 590 HL 591 (604)
Q Consensus 590 ~~ 591 (604)
+.
T Consensus 495 k~ 496 (498)
T KOG4328|consen 495 KK 496 (498)
T ss_pred CC
Confidence 54
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-21 Score=183.89 Aligned_cols=243 Identities=13% Similarity=0.178 Sum_probs=190.7
Q ss_pred cceeecccCC-CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHC-DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~-~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
+...+++++. .-|.|++|.++|+ ++||.++|.|.||+.. .....+....|.+.|.+++.-.+|. |++++.|.
T Consensus 236 k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~----~~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDR- 308 (626)
T KOG2106|consen 236 KRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKG----TNRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDR- 308 (626)
T ss_pred EEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCC----CceEEeEeeecCCceEEEEEecCcc-EeecCccc-
Confidence 3444555554 5799999999998 7899999999999986 4555555558999999999999996 45588888
Q ss_pred eEEEEEECCCce-----------EEE----------------------------EecCCCCCCeEEEEEecCCCEEEEEe
Q psy10566 371 HELWVWNIETEL-----------LRV----------------------------KLNHSPEDSLTSCSWNRDGTKFVCGG 411 (604)
Q Consensus 371 ~~i~vwd~~~~~-----------~~~----------------------------~~~~~~~~~v~~~~~~~~~~~l~s~~ 411 (604)
.|..||-.-.+ .++ ....+|......++.+|+...+++++
T Consensus 309 -ki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~g 387 (626)
T KOG2106|consen 309 -KIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCG 387 (626)
T ss_pred -eEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeecc
Confidence 89999832100 000 01123556688899999999999999
Q ss_pred cCCeEEEEEcCCCe-eeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEE
Q psy10566 412 IRGQFYQCDIEGQV-LDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 412 ~dg~i~iwd~~~~~-~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 490 (604)
.|+.+++|+ +.+. .......++.|+.|.|.| .++.|+..|...+.|.++.....+.....+++++.|+|+|.++++|
T Consensus 388 qdk~v~lW~-~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvg 465 (626)
T KOG2106|consen 388 QDKHVRLWN-DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVG 465 (626)
T ss_pred CcceEEEcc-CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEe
Confidence 999999999 4333 334445689999999999 9999999999999999997766666668999999999999999999
Q ss_pred ecCCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 491 VSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 491 ~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
+.|+.|++|-+... .....+..+.. ..|..+.|++|++++.+-+-|-.|..|..
T Consensus 466 s~d~~iyiy~Vs~~g~~y~r~~k~~g--s~ithLDwS~Ds~~~~~~S~d~eiLyW~~ 520 (626)
T KOG2106|consen 466 SHDNHIYIYRVSANGRKYSRVGKCSG--SPITHLDWSSDSQFLVSNSGDYEILYWKP 520 (626)
T ss_pred cCCCeEEEEEECCCCcEEEEeeeecC--ceeEEeeecCCCceEEeccCceEEEEEcc
Confidence 99999999998754 34444433333 46777888899999999999988988943
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=182.24 Aligned_cols=266 Identities=18% Similarity=0.265 Sum_probs=216.2
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeC------CC-----------
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD------PV----------- 333 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~------~~----------- 333 (604)
.+.|...++|... ...|+..+.||.+.|++++|++.+.+++|+|.|++..||... ..
T Consensus 166 ASADhTA~iWs~E------sg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE 239 (481)
T KOG0300|consen 166 ASADHTARIWSLE------SGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEE 239 (481)
T ss_pred cccccceeEEeec------cccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhh
Confidence 3445566666543 367899999999999999999999999999999999999721 00
Q ss_pred -------------------CceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCC
Q psy10566 334 -------------------TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDS 394 (604)
Q Consensus 334 -------------------~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~ 394 (604)
..-..++..+.+|...|.+..|-..|+.+++++.|. +..+||+++|..+..+. +|...
T Consensus 240 ~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDR--TAnlwDVEtge~v~~Lt-GHd~E 316 (481)
T KOG0300|consen 240 EEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDR--TANLWDVETGEVVNILT-GHDSE 316 (481)
T ss_pred hhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccc--cceeeeeccCceecccc-Ccchh
Confidence 001235677889999999999999999999999999 89999999999988776 88899
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCC--Ceeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-ccccc
Q psy10566 395 LTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT-DSNLL 469 (604)
Q Consensus 395 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~-~~~~~ 469 (604)
.+.++-+|..+.+++++.|.+.++||+.. ..+..|.+| .|++..|..+.+ +++|+.|.+|++||++... ....+
T Consensus 317 LtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRsplATI 395 (481)
T KOG0300|consen 317 LTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPLATI 395 (481)
T ss_pred ccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCc-eeecCCCceEEEeeeccccCcceee
Confidence 99999999999999999999999999963 456677787 689999987765 8899999999999999864 45667
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE----eeccccceEEEEeeeCCCCC--cEEEEEeCCCcEEE
Q psy10566 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK----FQGVTQGQFTIHSCFGGANQ--DFVASGSEDGKVYI 543 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~--~~l~sgs~dg~I~i 543 (604)
....+++.++++..+..++.-..+..|++||+......+. -++|.. .+.+++|..+. .-|++++.|..+.=
T Consensus 396 RtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrR---MV~c~AW~eehp~cnLftcGFDR~v~g 472 (481)
T KOG0300|consen 396 RTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRR---MVTCCAWLEEHPACNLFTCGFDRMVAG 472 (481)
T ss_pred ecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccce---eeeeeeccccCcccccccccccceeee
Confidence 7789999999999999999999999999999976654332 235554 45555553321 34678889999999
Q ss_pred EeCCCC
Q psy10566 544 WHVKRE 549 (604)
Q Consensus 544 wd~~~~ 549 (604)
|++...
T Consensus 473 W~in~p 478 (481)
T KOG0300|consen 473 WKINTP 478 (481)
T ss_pred eEeccc
Confidence 998754
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-21 Score=190.70 Aligned_cols=278 Identities=18% Similarity=0.218 Sum_probs=225.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
-..+|.++||+.+.+.||.+-.||.|.||++.. .+-....+.++ ...|.+++|++. ..|++.+.+| .|.-||+
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~---~w~~~~vi~g~~drsIE~L~W~e~-~RLFS~g~sg--~i~EwDl 97 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSN---NWFLEPVIHGPEDRSIESLAWAEG-GRLFSSGLSG--SITEWDL 97 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCC---CceeeEEEecCCCCceeeEEEccC-CeEEeecCCc--eEEEEec
Confidence 347899999999999999999999999999983 34445566665 568999999954 5678888888 8999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee-----eceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW-----EGVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----~~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
.+++....+. ...+.|++++.+|.+..+++|+.||.+..++.....+... ...++.++.|.|++..++.|+.||
T Consensus 98 ~~lk~~~~~d-~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg 176 (691)
T KOG2048|consen 98 HTLKQKYNID-SNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDG 176 (691)
T ss_pred ccCceeEEec-CCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCc
Confidence 9999888887 5678899999999999999999999877777754433222 124899999999999999999999
Q ss_pred eEEEEEcCCCccccccc---------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeee
Q psy10566 454 RIRTYNFEHLTDSNLLQ---------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~---------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~ 524 (604)
.|++||..++....+.. ...-|.++.+-.+ ..+++|.+.|+|.+||...+..++.+..|...+.++.
T Consensus 177 ~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~La--- 252 (691)
T KOG2048|consen 177 VIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALA--- 252 (691)
T ss_pred eEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEE---
Confidence 99999998876555211 1233667777744 5689999999999999999999999999988766654
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCcc----eEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKRELP----IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~~~~----~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..++++++++++.|+.|.-|...+++. ......|...|.+++..++ .+++||.|+++.+-....
T Consensus 253 v~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~---~l~sgG~d~~l~i~~s~~ 320 (691)
T KOG2048|consen 253 VADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN---ALISGGRDFTLAICSSRE 320 (691)
T ss_pred EcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc---eEEecceeeEEEEccccc
Confidence 357889999999999999998876543 2233568888999999854 899999999988865544
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=194.53 Aligned_cols=298 Identities=17% Similarity=0.234 Sum_probs=228.8
Q ss_pred CccceeecccCCCcEEEEEEcCCCC---eEEEEECCCeEEEEEeCCCCce-----------------eEee---------
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGL---KLATGSKDTTVIIWDVDPVTFT-----------------CQHR--------- 340 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~---~lasgs~dg~i~iwd~~~~~~~-----------------~~~~--------- 340 (604)
.++.+..+.||.+.|.+++|...+. +|||+|.|..|+||.+...+.. ....
T Consensus 180 ~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ 259 (764)
T KOG1063|consen 180 SFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISF 259 (764)
T ss_pred ceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEeh
Confidence 5677889999999999999997554 8999999999999988632200 0111
Q ss_pred -EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc--eEEE--Eec--CCCCCCeEEEEEecCCCEEEEEecC
Q psy10566 341 -KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRV--KLN--HSPEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 341 -~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~--~~~~--~~~--~~~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
..+.||.+.|+++.|+|.+..|++++.|. ++.+|...+. --.. ++. .+......++.|+|+++.+++-+..
T Consensus 260 eall~GHeDWV~sv~W~p~~~~LLSASaDk--smiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~ 337 (764)
T KOG1063|consen 260 EALLMGHEDWVYSVWWHPEGLDLLSASADK--SMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRT 337 (764)
T ss_pred hhhhcCcccceEEEEEccchhhheecccCc--ceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEeccc
Confidence 12349999999999999999999999999 8999987654 2222 221 1334558899999999999999999
Q ss_pred CeEEEEEcCC----Ceeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-----ccccccCCCCeeEEEECC
Q psy10566 414 GQFYQCDIEG----QVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT-----DSNLLQEDHPVMSFTIDA 482 (604)
Q Consensus 414 g~i~iwd~~~----~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~-----~~~~~~~~~~i~~~~~s~ 482 (604)
|..++|.... .......|| .|++++|.|.|.++++.+.|.+-++|---..+ ..+-.-|+..++|+++-+
T Consensus 338 Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn 417 (764)
T KOG1063|consen 338 GGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVN 417 (764)
T ss_pred CcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehcc
Confidence 9999998422 122233455 69999999999999999999999998765222 112233678899999988
Q ss_pred CCCEEEEEecCCeEEEEecCCC--------------------------------c-------------------------
Q psy10566 483 TDRLALLNVSTQGVHLWDLRDR--------------------------------I------------------------- 505 (604)
Q Consensus 483 ~~~~l~~~~~dg~I~lwd~~~~--------------------------------~------------------------- 505 (604)
....+++|.....+|+|+.... +
T Consensus 418 ~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p 497 (764)
T KOG1063|consen 418 EDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAP 497 (764)
T ss_pred CCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCc
Confidence 7667778877888888876321 0
Q ss_pred -------------------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcceEEeeCCCCC
Q psy10566 506 -------------------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPIATLSGHTRT 561 (604)
Q Consensus 506 -------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~l~~h~~~ 561 (604)
.++++.| +.+.+.++..+|+++++|+++.. ..|++|+..+...+..+.+|.-.
T Consensus 498 ~~L~ePP~EdqLq~~tLwPEv~KLYG---HGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLT 574 (764)
T KOG1063|consen 498 CELTEPPTEDQLQQNTLWPEVHKLYG---HGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLT 574 (764)
T ss_pred hhccCCChHHHHHHhccchhhHHhcc---CceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceE
Confidence 0111112 23456667778999999999764 35999999999999999999999
Q ss_pred eeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 562 VSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 562 V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|+.++|||| +++|+++|.|.++.+|......
T Consensus 575 VT~l~FSpd-g~~LLsvsRDRt~sl~~~~~~~ 605 (764)
T KOG1063|consen 575 VTRLAFSPD-GRYLLSVSRDRTVSLYEVQEDI 605 (764)
T ss_pred EEEEEECCC-CcEEEEeecCceEEeeeeeccc
Confidence 999999999 8999999999999999885543
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-20 Score=186.12 Aligned_cols=263 Identities=15% Similarity=0.102 Sum_probs=192.8
Q ss_pred cceeecccCCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-CC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP-ED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~-d~ 369 (604)
+..+.+.+|. .+.+++|+|+|+.+ ++++.++.|++||.. ..+....+..+.. +..++|+|+++.+++++. ++
T Consensus 22 ~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~----~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~ 95 (300)
T TIGR03866 22 EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLA----TGEVIGTLPSGPD-PELFALHPNGKILYIANEDDN 95 (300)
T ss_pred ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECC----CCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCC
Confidence 3556666554 46789999999976 567788999999987 3344455554433 578899999998876654 55
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-eEEEEEcCC-Ceeeee-eceeEEEEEEcCCCCEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-QFYQCDIEG-QVLDSW-EGVRVNCLWCRSDGKSV 446 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~-~~~~~~-~~~~v~~l~~s~~g~~l 446 (604)
.+++||+.++..+..+.. ...+.+++|+|++..+++++.++ .+..||... +..... .+.....+.|+++++.+
T Consensus 96 --~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 171 (300)
T TIGR03866 96 --LVTVIDIETRKVLAEIPV--GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKEL 171 (300)
T ss_pred --eEEEEECCCCeEEeEeeC--CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEE
Confidence 899999999887766652 23468899999999999988875 567789853 333322 23456789999999988
Q ss_pred EEE-eCCCeEEEEEcCCCcccccccC--------CCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCceeeEeeccccc
Q psy10566 447 LAA-DTHHRIRTYNFEHLTDSNLLQE--------DHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRILLRKFQGVTQG 516 (604)
Q Consensus 447 ~~~-~~dg~I~i~d~~~~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~~~~~~~~~~~ 516 (604)
+++ ..++.|++||+.+.+....+.. ......++++|++++++++ ..++.+.+||+++++.+..+.. ...
T Consensus 172 ~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~ 250 (300)
T TIGR03866 172 WVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLV-GQR 250 (300)
T ss_pred EEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEe-CCC
Confidence 655 4689999999998755433221 1123568899999986654 4567899999998877665432 222
Q ss_pred eEEEEeeeCCCCCcEEEEE-eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcC
Q psy10566 517 QFTIHSCFGGANQDFVASG-SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sg-s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp 569 (604)
+..+.++|+|++|+++ +.+|.|++||+.+++++..+... ...+.++++|
T Consensus 251 ---~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 251 ---VWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred ---cceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 3345567999999886 46899999999999999999865 5569998876
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-19 Score=175.83 Aligned_cols=279 Identities=15% Similarity=0.248 Sum_probs=214.3
Q ss_pred cCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 299 DHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
.-...|..+.|.|.+. ++++++ -+.+..|+...+.. .+....+..+ ..-|.|++|.++|. ++++.++| .|.+|
T Consensus 198 ~sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~~~~l-~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G--~i~Iw 272 (626)
T KOG2106|consen 198 TSNEVVFLATFHPTDPNLIITCG-KGHLYFWTLRGGSL-VKRQGIFEKREKKFVLCVTFLENGD-VITGDSGG--NILIW 272 (626)
T ss_pred eccceEEEEEeccCCCcEEEEeC-CceEEEEEccCCce-EEEeeccccccceEEEEEEEcCCCC-EEeecCCc--eEEEE
Confidence 3456788999999766 555554 68999999873322 2233344443 36799999999996 66887777 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee----------------------------
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS---------------------------- 428 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------------------- 428 (604)
+..+.+...... .|.+.|.+++...+|..+- |+.|..|..||-+-+.++.
T Consensus 273 ~~~~~~~~k~~~-aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~ 350 (626)
T KOG2106|consen 273 SKGTNRISKQVH-AHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNF 350 (626)
T ss_pred eCCCceEEeEee-ecCCceEEEEEecCccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccce
Confidence 998887777666 8999999999999997666 9999999999842111100
Q ss_pred -----e----------eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC
Q psy10566 429 -----W----------EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST 493 (604)
Q Consensus 429 -----~----------~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 493 (604)
+ ++.....++..|+.+.+++++.|+.+++|+ ..+.........+..++.|+|.| .+++|+..
T Consensus 351 iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~ 427 (626)
T KOG2106|consen 351 ILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTAT 427 (626)
T ss_pred EEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeecc
Confidence 0 011355678899999999999999999999 44444555567899999999999 99999999
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc-ceEEee-CCCCCeeEEEEcCCC
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL-PIATLS-GHTRTVSCVAWNPVY 571 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~-~~~~l~-~h~~~V~~v~~sp~~ 571 (604)
|...+.|.++...+..-.. . ..+.++.++|+|.+||.|+.|+.|+||.+..+. ...... .|..+|+.+.|++|
T Consensus 428 G~w~V~d~e~~~lv~~~~d-~---~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~D- 502 (626)
T KOG2106|consen 428 GRWFVLDTETQDLVTIHTD-N---EQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSD- 502 (626)
T ss_pred ceEEEEecccceeEEEEec-C---CceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCC-
Confidence 9999999998655544433 2 356777889999999999999999999987543 333332 34589999999999
Q ss_pred CcEEEEEeCCCcEEEECCCCC
Q psy10566 572 HQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++++.+-+.|-.|..|....-
T Consensus 503 s~~~~~~S~d~eiLyW~~~~~ 523 (626)
T KOG2106|consen 503 SQFLVSNSGDYEILYWKPSEC 523 (626)
T ss_pred CceEEeccCceEEEEEccccC
Confidence 899999999999999955443
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-22 Score=191.91 Aligned_cols=262 Identities=19% Similarity=0.282 Sum_probs=220.0
Q ss_pred ccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEE
Q psy10566 275 NVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354 (604)
Q Consensus 275 ~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~ 354 (604)
....+||.......+|...+-.+. ...-|.+|...|||+.|++|+.-.++.|||+... +......+....-..++++
T Consensus 440 gcVKVWdis~pg~k~PvsqLdcl~-rdnyiRSckL~pdgrtLivGGeastlsiWDLAap--TprikaeltssapaCyALa 516 (705)
T KOG0639|consen 440 GCVKVWDISQPGNKSPVSQLDCLN-RDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAP--TPRIKAELTSSAPACYALA 516 (705)
T ss_pred CeEEEeeccCCCCCCccccccccC-cccceeeeEecCCCceEEeccccceeeeeeccCC--CcchhhhcCCcchhhhhhh
Confidence 356678877777777766665553 4467999999999999999999999999999843 3333344554445678899
Q ss_pred ECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeec-e
Q psy10566 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEG-V 432 (604)
Q Consensus 355 ~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~-~ 432 (604)
.+||.+..++|..|| .|.|||+.+...++.+. +|.+.+.|+..++||..|.+|+-|.+|+.||+ +++.+....- .
T Consensus 517 ~spDakvcFsccsdG--nI~vwDLhnq~~Vrqfq-GhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~S 593 (705)
T KOG0639|consen 517 ISPDAKVCFSCCSDG--NIAVWDLHNQTLVRQFQ-GHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSS 593 (705)
T ss_pred cCCccceeeeeccCC--cEEEEEcccceeeeccc-CCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhh
Confidence 999999999999999 89999999999888887 88999999999999999999999999999999 4555544433 3
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
.|.++.++|.+.++++|-.++.+.+..........+..|..-|.++.|.+.|+++++.+.|+-+..|...-|..+...+.
T Consensus 594 QIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE 673 (705)
T KOG0639|consen 594 QIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE 673 (705)
T ss_pred hheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccc
Confidence 79999999999999999999999999988888777888999999999999999999999999999999888877655443
Q ss_pred cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
. ..+.+|..+.|.+||++||.|..-.||.+
T Consensus 674 ~----SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 674 S----SSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred c----CcceeeeeccCceEEEecCCCcceEEEEE
Confidence 2 25667788899999999999988888864
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=198.42 Aligned_cols=284 Identities=16% Similarity=0.239 Sum_probs=213.4
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC---CCeeEEEECC-CCCeEEEEeCCCceEEEEEECC
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT---LGVAYLAWSP-DSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~---~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~ 379 (604)
...|...++-..++.++. ..++||.+++......+...+.... ..+..+.|+. +.++|++++..| .|.+||+.
T Consensus 42 ~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG--~i~vWdln 118 (839)
T KOG0269|consen 42 ANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNG--VISVWDLN 118 (839)
T ss_pred cceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCC--cEEEEecC
Confidence 445567788888888874 4789998886555444444433221 2355678875 467889999888 89999998
Q ss_pred C---ceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeeeec--eeEEEEEEcC-CCCEEEEEeC
Q psy10566 380 T---ELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRS-DGKSVLAADT 451 (604)
Q Consensus 380 ~---~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~--~~v~~l~~s~-~g~~l~~~~~ 451 (604)
. .+.+..+ ..|...++++.|++ ...+|++|+.||.|++||++ .+....+.+ ..|.++.|+| .+..++++..
T Consensus 119 k~~rnk~l~~f-~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~d 197 (839)
T KOG0269|consen 119 KSIRNKLLTVF-NEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHD 197 (839)
T ss_pred ccccchhhhHh-hhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecC
Confidence 7 3333333 47889999999999 56789999999999999995 333333433 3799999999 4788999999
Q ss_pred CCeEEEEEcCCCc--ccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 452 HHRIRTYNFEHLT--DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 452 dg~I~i~d~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.|.+++||++... ...+..|.++|.++.|+|++.+|++|+.|+.|+|||..+.+.-....-++. ..+..+.|-|..
T Consensus 198 sG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTi--apv~rVkWRP~~ 275 (839)
T KOG0269|consen 198 SGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTI--APVGRVKWRPAR 275 (839)
T ss_pred CceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeec--ceeeeeeeccCc
Confidence 9999999999754 344566899999999999999999999999999999987654433332222 244445555554
Q ss_pred -cEEEEEeC--CCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 530 -DFVASGSE--DGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 530 -~~l~sgs~--dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..|++++. |-.|+|||++. .-+..++..|...++.++|...+...+.+|+.||+|..-.+++..
T Consensus 276 ~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~knat 343 (839)
T KOG0269|consen 276 SYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNAT 343 (839)
T ss_pred cchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhccc
Confidence 45666654 78999999985 456788999999999999976547889999999998876666554
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=194.57 Aligned_cols=244 Identities=19% Similarity=0.301 Sum_probs=199.5
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE-EecCCCCCCeEE-EEEec-CCCEEEEEecC
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV-KLNHSPEDSLTS-CSWNR-DGTKFVCGGIR 413 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~-~~~~~~~~~v~~-~~~~~-~~~~l~s~~~d 413 (604)
.+..+.+.+|...|..+++.+.. .++++|.|+ ++++|+-..+.... ....++.+.|.. +++.+ ++-.+++|+.|
T Consensus 4 Y~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~--t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D 80 (745)
T KOG0301|consen 4 YKLSHELEGHKSDVRAVAVTDGV-CIISGSRDG--TVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMD 80 (745)
T ss_pred ceeEEEeccCccchheeEecCCe-EEeecCCCC--ceeeeeccCcccccceecccCcceeeccceeccccCcceEeeccc
Confidence 34567899999999999877654 788999998 89999987666544 333345566665 78776 55569999999
Q ss_pred CeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEE
Q psy10566 414 GQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 414 g~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 490 (604)
+.|.+|... ...+..+.+| .|.++....++. +++|+.|.++++|-....... ...|...|.++..-|.+ .+++|
T Consensus 81 ~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l~~~-l~gH~asVWAv~~l~e~-~~vTg 157 (745)
T KOG0301|consen 81 TTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGELVYS-LQGHTASVWAVASLPEN-TYVTG 157 (745)
T ss_pred ceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchhhhcc-cCCcchheeeeeecCCC-cEEec
Confidence 999999995 6778888888 577777777777 999999999999987654433 67789999999999988 88999
Q ss_pred ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 491 VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 491 ~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
+.|.+|++|.- ++.+++|.+|...+..+ .. -++..+++++.||.|+.|++ +|+.+.+..+|+.-|.+++..++
T Consensus 158 saDKtIklWk~--~~~l~tf~gHtD~VRgL---~v-l~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~ 230 (745)
T KOG0301|consen 158 SADKTIKLWKG--GTLLKTFSGHTDCVRGL---AV-LDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALS 230 (745)
T ss_pred cCcceeeeccC--Cchhhhhccchhheeee---EE-ecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCC
Confidence 99999999974 78899999999854444 43 23446889999999999999 78999999999999999997776
Q ss_pred CCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
...++|+|+|++++||+...-..
T Consensus 231 -~~~Ivs~gEDrtlriW~~~e~~q 253 (745)
T KOG0301|consen 231 -DGLIVSTGEDRTLRIWKKDECVQ 253 (745)
T ss_pred -CCeEEEecCCceEEEeecCceEE
Confidence 78999999999999999875443
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=189.57 Aligned_cols=128 Identities=25% Similarity=0.350 Sum_probs=104.8
Q ss_pred ccceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCc-ee-EeeEEeccCCCCeeEEEECCCCCeEEEEeC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTF-TC-QHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~-~~-~~~~~l~~h~~~V~~l~~spd~~~l~s~~~ 367 (604)
.+.+..|.+|.+.|+.+.|+| +..+|||||.|..|+||.+..+-. .. ..-..+.+..-.|.++.|+|...-|+..+.
T Consensus 69 ~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a 148 (1012)
T KOG1445|consen 69 TRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGA 148 (1012)
T ss_pred ccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEecc
Confidence 456778999999999999999 445899999999999999972211 11 111233334567889999998877777777
Q ss_pred CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q psy10566 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI 421 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 421 (604)
.+ .+++||+.+++...... +|.+.|.++.|+.||+.+++++.|..|+|||.
T Consensus 149 ~g--~v~i~D~stqk~~~el~-~h~d~vQSa~WseDG~llatscKdkqirifDP 199 (1012)
T KOG1445|consen 149 HG--SVYITDISTQKTAVELS-GHTDKVQSADWSEDGKLLATSCKDKQIRIFDP 199 (1012)
T ss_pred Cc--eEEEEEcccCceeeccc-CCchhhhccccccCCceEeeecCCcceEEeCC
Confidence 77 79999999999888876 78899999999999999999999999999986
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-20 Score=193.48 Aligned_cols=241 Identities=18% Similarity=0.332 Sum_probs=197.1
Q ss_pred ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc-eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q psy10566 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE-LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE 422 (604)
Q Consensus 344 ~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 422 (604)
..|+.+-+.|+|.|+|++|++|+.|+ .|++|+.... +....+. .+...|.+++. .+.+|++|+.+++|.+|.+.
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg--~ir~~~~~sd~e~P~ti~-~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fp 84 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDG--DIRKWKTNSDEEEPETID-ISGELVSSIAC--YSNHFLTGSEQNTVLRYKFP 84 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCC--ceEEeecCCcccCCchhh-ccCceeEEEee--cccceEEeeccceEEEeeCC
Confidence 35888999999999999999999999 7999998766 3222222 24556666665 55699999999999999984
Q ss_pred -C---CeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc-cccccCCCCeeEEEECCCCCEEEEEecCCeEE
Q psy10566 423 -G---QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD-SNLLQEDHPVMSFTIDATDRLALLNVSTQGVH 497 (604)
Q Consensus 423 -~---~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~ 497 (604)
+ ..+..+ ..++++++++.+|+++++|+.|-.|++.+..+... ....+|..+|.++.|+|.+.+|++.+.||.|+
T Consensus 85 s~~~~~iL~Rf-tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~ 163 (933)
T KOG1274|consen 85 SGEEDTILARF-TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQ 163 (933)
T ss_pred CCCccceeeee-eccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEE
Confidence 2 233332 34799999999999999999999999999987654 44566899999999999999999999999999
Q ss_pred EEecCCCceeeEeeccccc-----eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--CCCCeeEEEEcCC
Q psy10566 498 LWDLRDRILLRKFQGVTQG-----QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG--HTRTVSCVAWNPV 570 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--h~~~V~~v~~sp~ 570 (604)
+||+.++.+..++.+.... ...+.-..|+|++..++..+.|+.|++|+..++.....+.. |...+.++.|+|+
T Consensus 164 iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn 243 (933)
T KOG1274|consen 164 IWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN 243 (933)
T ss_pred EEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC
Confidence 9999999887777653321 11233356789988888888999999999999999888865 3455999999999
Q ss_pred CCcEEEEEeCCCcEEEECCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
|.+||+++.||.|.|||+++
T Consensus 244 -G~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 244 -GKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred -CcEEeeeccCCcEEEEeccc
Confidence 89999999999999999995
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=172.11 Aligned_cols=274 Identities=19% Similarity=0.282 Sum_probs=207.8
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce--------eEeeEEecc-CCCCeeEEEEC-------CCCCeEEEEeC
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT--------CQHRKTLEG-HTLGVAYLAWS-------PDSSHLLVVGP 367 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~--------~~~~~~l~~-h~~~V~~l~~s-------pd~~~l~s~~~ 367 (604)
...+.|||||..|++-+.|..+.+|++...... .....++.- ....|...+|- |+..++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 345799999999999999999999998632110 011111111 23567777875 67788888888
Q ss_pred CCceEEEEEECCCceEEEEecC-CCC---CCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeee---ee-e-----ce
Q psy10566 368 EDCHELWVWNIETELLRVKLNH-SPE---DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLD---SW-E-----GV 432 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~-~~~---~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~---~~-~-----~~ 432 (604)
+. -|++||.-+|+....+.. .|. ....+++|+|||.+|++| ....|++||+. |.... .+ + ..
T Consensus 132 ~~--PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~g 208 (406)
T KOG2919|consen 132 DQ--PIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKG 208 (406)
T ss_pred cC--ceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccc
Confidence 88 799999999987766542 121 235689999999999865 56789999992 32211 11 1 12
Q ss_pred eEEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCC-Cceee
Q psy10566 433 RVNCLWCRSDG-KSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRD-RILLR 508 (604)
Q Consensus 433 ~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~-~~~~~ 508 (604)
-+.+++|+|.. +.+++++...++-||.-.......++ .+.+.|+.+.|.++|+.+++|.. +..|..||++. +.++.
T Consensus 209 iisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~ 288 (406)
T KOG2919|consen 209 IISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVY 288 (406)
T ss_pred eeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhh
Confidence 58899999965 48889999999999988777665554 57899999999999999999987 67899999986 45667
Q ss_pred Eeecccc-ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 509 KFQGVTQ-GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 509 ~~~~~~~-~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
.+..|.. ....|. ....|++++|++|+.||.|++||++. |..+..+..|...|+.|+++|- -.++|+++...
T Consensus 289 ~L~rhv~~TNQRI~-FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~-mpilatssGqr 362 (406)
T KOG2919|consen 289 ALERHVGDTNQRIL-FDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPI-MPILATSSGQR 362 (406)
T ss_pred hhhhhccCccceEE-EecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcc-cceeeeccCce
Confidence 7777765 333343 33468999999999999999999998 7878888899999999999998 78898887543
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-21 Score=168.44 Aligned_cols=247 Identities=16% Similarity=0.229 Sum_probs=190.7
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce---EEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEE
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---LRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFY 417 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~ 417 (604)
-..|.+.|..+...--|+.|++|+.|+ +|+|+.+++.. .+..+ .+|.++|..++|.. -|.+|++++.||.|.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~--tVkIf~v~~n~~s~ll~~L-~Gh~GPVwqv~wahPk~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDG--TVKIFEVRNNGQSKLLAEL-TGHSGPVWKVAWAHPKFGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCc--cEEEEEEcCCCCceeeeEe-cCCCCCeeEEeecccccCcEeeEeecCceEE
Confidence 345888888888888899999999999 89999997754 33444 48999999999976 899999999999999
Q ss_pred EEEcCCCeee---eeece--eEEEEEEcCC--CCEEEEEeCCCeEEEEEcCCC----cccccccCCCCeeEEEECCC---
Q psy10566 418 QCDIEGQVLD---SWEGV--RVNCLWCRSD--GKSVLAADTHHRIRTYNFEHL----TDSNLLQEDHPVMSFTIDAT--- 483 (604)
Q Consensus 418 iwd~~~~~~~---~~~~~--~v~~l~~s~~--g~~l~~~~~dg~I~i~d~~~~----~~~~~~~~~~~i~~~~~s~~--- 483 (604)
+|.-++.... .+..| .|++++|.|. |-.|++++.||.|.+.+++.. .......|...++++++.|.
T Consensus 84 iWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~ 163 (299)
T KOG1332|consen 84 IWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAP 163 (299)
T ss_pred EEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCC
Confidence 9998654322 22233 6999999986 668999999999999998775 22334457888999999986
Q ss_pred C-----------CEEEEEecCCeEEEEecCCCc--eeeEeeccccceEEEEeeeC-CCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 484 D-----------RLALLNVSTQGVHLWDLRDRI--LLRKFQGVTQGQFTIHSCFG-GANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 484 ~-----------~~l~~~~~dg~I~lwd~~~~~--~~~~~~~~~~~~~~i~~~~~-~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
| +.|++|+.|+.|+||+..++. .-+++.+|..-+..+..+.. +--..+||++|.||+|.||..+..
T Consensus 164 g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 164 GSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE 243 (299)
T ss_pred ccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence 4 569999999999999998753 34557888885554433211 112358999999999999987632
Q ss_pred -cc--eEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 550 -LP--IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 550 -~~--~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++ ...+......+..+.||+. +++|+.++.|+.|.+|.-+..-
T Consensus 244 ~e~wk~tll~~f~~~~w~vSWS~s-Gn~LaVs~GdNkvtlwke~~~G 289 (299)
T KOG1332|consen 244 YEPWKKTLLEEFPDVVWRVSWSLS-GNILAVSGGDNKVTLWKENVDG 289 (299)
T ss_pred cCcccccccccCCcceEEEEEecc-ccEEEEecCCcEEEEEEeCCCC
Confidence 11 1223334578999999999 8999999999999999876543
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-22 Score=202.68 Aligned_cols=252 Identities=17% Similarity=0.265 Sum_probs=213.1
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
+.+++.+..+-.+++|+.. .+..|...|.++..-..++.+++|+.+. .+-+|.+.....+..+. +|.
T Consensus 4 ~~~~m~~~~~t~Lr~~~~~----------~~~~hsaav~~lk~~~s~r~~~~Gg~~~--k~~L~~i~kp~~i~S~~-~he 70 (825)
T KOG0267|consen 4 MEFLMKTKRATKLRVWDTR----------EFVAHSAAVGCLKIRKSSRSLVTGGEDE--KVNLWAIGKPNAITSLT-GHE 70 (825)
T ss_pred ccccceeeeeeccccccch----------hhhhhhhhhceeeeeccceeeccCCCce--eeccccccCCchhheee-ccC
Confidence 3345555566678888865 2334788888888877778888888887 78899987776666654 799
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~ 469 (604)
.+|.++.|+++...+++|+.+|+|++||+ +++.++.+.+| .+..+.|+|-+.+++.|+.|..+++||.+...+...+
T Consensus 71 spIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~ 150 (825)
T KOG0267|consen 71 SPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTY 150 (825)
T ss_pred CcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeee
Confidence 99999999999999999999999999999 57888888888 6888899999999999999999999999965555444
Q ss_pred c-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 470 Q-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 470 ~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
. |...+..+.|+|+|++++.++.|.++++||+..|+....|.+|...+.. .-++|..-++++||.|++|++||+++
T Consensus 151 ~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~s---le~hp~e~Lla~Gs~d~tv~f~dlet 227 (825)
T KOG0267|consen 151 KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQS---LEFHPLEVLLAPGSSDRTVRFWDLET 227 (825)
T ss_pred cCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccc---cccCchhhhhccCCCCceeeeeccce
Confidence 4 6777889999999999999999999999999999999999999885544 44678888999999999999999999
Q ss_pred CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 549 ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 549 ~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
.+.+.........|.+.+|+|+ +..+++|..+
T Consensus 228 fe~I~s~~~~~~~v~~~~fn~~-~~~~~~G~q~ 259 (825)
T KOG0267|consen 228 FEVISSGKPETDGVRSLAFNPD-GKIVLSGEQI 259 (825)
T ss_pred eEEeeccCCccCCceeeeecCC-ceeeecCchh
Confidence 8888888888889999999999 6777776544
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-20 Score=173.12 Aligned_cols=294 Identities=15% Similarity=0.153 Sum_probs=220.7
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC--CceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV--TFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~--~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.+-+.+|.+.|.++.||.++++||+|+.|..+++|+++.. ..+.+++..... |...|.|++|...+..+++|+.++
T Consensus 48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~ 127 (609)
T KOG4227|consen 48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG 127 (609)
T ss_pred hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence 34567899999999999999999999999999999998711 112233333322 558899999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCC-CCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC--eeeee----eceeEEEEEEcCC
Q psy10566 370 CHELWVWNIETELLRVKLNHS-PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ--VLDSW----EGVRVNCLWCRSD 442 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~----~~~~v~~l~~s~~ 442 (604)
+|...|+++.+.+..+... ..+.|+.+..+|..+.|++.+.++.|.+||.... .+..+ .+.....+-|.|.
T Consensus 128 --~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~ 205 (609)
T KOG4227|consen 128 --TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPE 205 (609)
T ss_pred --eeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCC
Confidence 8999999999888777632 2458999999999999999999999999999432 12111 1234667788886
Q ss_pred C-CEEEEEeCCCeEEEEEcCCCccccc--------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee-eEeec
Q psy10566 443 G-KSVLAADTHHRIRTYNFEHLTDSNL--------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL-RKFQG 512 (604)
Q Consensus 443 g-~~l~~~~~dg~I~i~d~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~-~~~~~ 512 (604)
. ..+++.+..+.+.+||.+....... ......-.++.|+|+|..+++--....-.+||+-+..+. .++.
T Consensus 206 ~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D- 284 (609)
T KOG4227|consen 206 TPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSD- 284 (609)
T ss_pred CceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEecc-
Confidence 4 5677778888999999987533221 111234478899999999988777667778898875443 3333
Q ss_pred ccc-c---eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-----C------------------cceEEeeCCCCCeeEE
Q psy10566 513 VTQ-G---QFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-----E------------------LPIATLSGHTRTVSCV 565 (604)
Q Consensus 513 ~~~-~---~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-----~------------------~~~~~l~~h~~~V~~v 565 (604)
|.. + ...+.+|.+ .+..-+++|+.+-.|++|.+.. | +.+..++||...++.|
T Consensus 285 ~N~~GY~N~~T~KS~~F-~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQV 363 (609)
T KOG4227|consen 285 HNPNGYCNIKTIKSMTF-IDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQV 363 (609)
T ss_pred CCCCcceeeeeeeeeee-ecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccce
Confidence 332 2 223444555 3455699999999999998742 1 2355789999999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 566 AWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 566 ~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
.|+|. .++|++.+....++||....
T Consensus 364 RF~~H-~~~l~SSGVE~~~KlWS~~r 388 (609)
T KOG4227|consen 364 RFSQH-NNLLVSSGVENSFKLWSDHR 388 (609)
T ss_pred eecCC-cceEeccchhhheecccccc
Confidence 99998 89999999999999997643
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-20 Score=184.55 Aligned_cols=272 Identities=15% Similarity=0.225 Sum_probs=212.3
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.|..++|-|||..|+.+. +..+.|||.+ .+....++++|.+.|+|++|+.||+.+++|+.|. .|.+|+..-..
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~n----dG~llqtLKgHKDtVycVAys~dGkrFASG~aDK--~VI~W~~klEG 86 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTS----DGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADK--SVIIWTSKLEG 86 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCC----CcccccccccccceEEEEEEccCCceeccCCCce--eEEEecccccc
Confidence 799999999999777764 5679999998 6677899999999999999999999999999998 89999865433
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcC
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-GVRVNCLWCRSDGKSVLAADTHHRIRTYNFE 461 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~ 461 (604)
.+...|.+.|.|+.|+|-...+++++-. ..-+|..+.+.+.... ..++.+.+|..||.+++.|-.+|+|.+-+-.
T Consensus 87 ---~LkYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~ 162 (1081)
T KOG1538|consen 87 ---ILKYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKN 162 (1081)
T ss_pred ---eeeeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCC
Confidence 2233588999999999999999888753 3567877655444433 3489999999999999999999999998765
Q ss_pred CCccccccc---CCCCeeEEEECCCC-----CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEE
Q psy10566 462 HLTDSNLLQ---EDHPVMSFTIDATD-----RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVA 533 (604)
Q Consensus 462 ~~~~~~~~~---~~~~i~~~~~s~~~-----~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 533 (604)
..+...+.. ...+|.+++|+|.. ..+++..-..++.+|.+... .+.+-..-.- ...++.+-++|.|+.
T Consensus 163 gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~-~Igk~r~L~F---dP~CisYf~NGEy~L 238 (1081)
T KOG1538|consen 163 GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGK-QIGKDRALNF---DPCCISYFTNGEYIL 238 (1081)
T ss_pred CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecce-eecccccCCC---CchhheeccCCcEEE
Confidence 554444433 46799999999975 45666666677777766432 2221111111 112233348999999
Q ss_pred EEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 534 SGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 534 sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
.|+.|+.+.+|- +.|-.+.++......|+.|+..|+ ++.++.|+.||+|--|++..
T Consensus 239 iGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PN-sQ~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 239 LGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPN-SQYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred EccCCCceEEEe-ecCeEEeeccccceeEEEEEEccC-CceEEEEEccCeeehhhhHH
Confidence 999999999996 557778888777889999999999 89999999999999988754
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=196.99 Aligned_cols=236 Identities=19% Similarity=0.269 Sum_probs=207.1
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.+.+..|...|.|+..-..++.+++|+.|..+-+|.+. +...+..+.+|..+|.++.|+++...|++|+.+| +|
T Consensus 21 ~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~----kp~~i~S~~~hespIeSl~f~~~E~Llaagsasg--ti 94 (825)
T KOG0267|consen 21 TREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIG----KPNAITSLTGHESPIESLTFDTSERLLAAGSASG--TI 94 (825)
T ss_pred chhhhhhhhhhceeeeeccceeeccCCCceeecccccc----CCchhheeeccCCcceeeecCcchhhhcccccCC--ce
Confidence 34566799999999987788999999999999999987 5556677999999999999999999999999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++||++.++.++.+. +|...+.++.|+|-+.+++.|+.|+.+++||+. ..+...+.+| .+.++.|+|+|++++.++
T Consensus 95 K~wDleeAk~vrtLt-gh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ 173 (825)
T KOG0267|consen 95 KVWDLEEAKIVRTLT-GHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGG 173 (825)
T ss_pred eeeehhhhhhhhhhh-ccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccC
Confidence 999999998887766 788899999999999999999999999999996 6677777776 488999999999999999
Q ss_pred CCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.|..+++||...++....+. |...+.++.|+|..-+++.|+.|+++++||+++.+.+........ .+.+..+.+++
T Consensus 174 ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~---~v~~~~fn~~~ 250 (825)
T KOG0267|consen 174 EDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETD---GVRSLAFNPDG 250 (825)
T ss_pred CcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccC---CceeeeecCCc
Confidence 99999999999888776665 889999999999999999999999999999998877766655533 56667778999
Q ss_pred cEEEEEeCCC
Q psy10566 530 DFVASGSEDG 539 (604)
Q Consensus 530 ~~l~sgs~dg 539 (604)
..+++|....
T Consensus 251 ~~~~~G~q~s 260 (825)
T KOG0267|consen 251 KIVLSGEQIS 260 (825)
T ss_pred eeeecCchhh
Confidence 9998886653
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-19 Score=179.15 Aligned_cols=243 Identities=16% Similarity=0.235 Sum_probs=197.4
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE-ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CC
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK-LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EG 423 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~ 423 (604)
...+|.++||+.+++.||.+-.+| .|-+|++..+-.... +..+....|.+++|. ++..|++.+.+|.|..||+ ++
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g--~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~l 100 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDG--NIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTL 100 (691)
T ss_pred eccceEEEEEeccCCceeeeccCC--cEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccC
Confidence 457899999999999999998888 899999998765443 344556789999999 6678889999999999999 56
Q ss_pred Ceeeeee--ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc--cc-cCCCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 424 QVLDSWE--GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN--LL-QEDHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 424 ~~~~~~~--~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~--~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
+...... +..|.+++.+|.+..++.|+.||.+..++........ .+ ...+.+.+++|+|++..++.|+.||.|++
T Consensus 101 k~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iri 180 (691)
T KOG2048|consen 101 KQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRI 180 (691)
T ss_pred ceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEE
Confidence 6666554 4589999999999999999999977777776654332 22 23689999999999999999999999999
Q ss_pred EecCCCceeeEee----cccc-ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc
Q psy10566 499 WDLRDRILLRKFQ----GVTQ-GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573 (604)
Q Consensus 499 wd~~~~~~~~~~~----~~~~-~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~ 573 (604)
||..++..+.... +... ....+.++.+ -....|++|..-|+|.+||...+.++..+..|.+.|.+++..++ +.
T Consensus 181 wd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~-Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~-~d 258 (691)
T KOG2048|consen 181 WDVKSGQTLHIITMQLDRLSKREPTIVWSVLF-LRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADN-ED 258 (691)
T ss_pred EEcCCCceEEEeeecccccccCCceEEEEEEE-eecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCC-CC
Confidence 9999987776222 1122 3333433333 24458999999999999999999999999999999999999998 78
Q ss_pred EEEEEeCCCcEEEECCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.++++|.|+.|.-+...+..
T Consensus 259 ~vfsaGvd~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 259 RVFSAGVDPKIIQYSLTTNK 278 (691)
T ss_pred eEEEccCCCceEEEEecCCc
Confidence 99999999999888776653
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-20 Score=177.40 Aligned_cols=242 Identities=15% Similarity=0.276 Sum_probs=180.5
Q ss_pred hcCCCCCCCccc--ccCccccccccCcCcCCC----CccceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCC
Q psy10566 260 YHCPYHNTKVDE--SLENVSLLVDHLCTKEEF----PCETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDP 332 (604)
Q Consensus 260 ~~~~~~~~~~~~--~~~~~~l~~d~~~~~~~~----p~~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~ 332 (604)
.+++.+++..-. .-....+++|..+..... ...+-..|.||+++-++++|++... .|++|+.|++|++||+..
T Consensus 130 aRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~ 209 (422)
T KOG0264|consen 130 ARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINA 209 (422)
T ss_pred hhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccc
Confidence 344555544421 223344555544332111 3455668999999999999999765 899999999999999984
Q ss_pred CCc---eeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEEEEECCCc-eEEEEecCCCCCCeEEEEEec-CCCE
Q psy10566 333 VTF---TCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELWVWNIETE-LLRVKLNHSPEDSLTSCSWNR-DGTK 406 (604)
Q Consensus 333 ~~~---~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~ 406 (604)
... .......+.+|...|..++|+|-.. .+++++.|+ .+.+||++++ .........|...|.|++|+| ++..
T Consensus 210 ~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~--~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~i 287 (422)
T KOG0264|consen 210 ESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDG--KLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFI 287 (422)
T ss_pred cccCCccccceEEeecCCcceehhhccccchhhheeecCCC--eEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCce
Confidence 332 2456778899999999999999655 555666666 8999999962 233334457899999999999 6778
Q ss_pred EEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCcccc------------cc
Q psy10566 407 FVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDG-KSVLAADTHHRIRTYNFEHLTDSN------------LL 469 (604)
Q Consensus 407 l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~------------~~ 469 (604)
||+|+.|++|.+||++ .+.+..+.+| .|..+.|+|+. ..+++++.|+.+.+||+..-.... ++
T Consensus 288 lAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF 367 (422)
T KOG0264|consen 288 LATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLF 367 (422)
T ss_pred EEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeE
Confidence 8999999999999996 4677788777 69999999975 567788899999999997532221 12
Q ss_pred ---cCCCCeeEEEECCCCCE-EEEEecCCeEEEEecCC
Q psy10566 470 ---QEDHPVMSFTIDATDRL-ALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 470 ---~~~~~i~~~~~s~~~~~-l~~~~~dg~I~lwd~~~ 503 (604)
+|...|..+.|+|+... +++...|+.+.||.+..
T Consensus 368 ~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 368 IHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 35678999999998875 55667799999998753
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-20 Score=176.77 Aligned_cols=250 Identities=13% Similarity=0.214 Sum_probs=210.1
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.++.+.--..+|.+++|.|+|. .+++++.-...+.||+. +.+...+....++. ..+.....||++++|+..|..|
T Consensus 248 ~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle--~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G 325 (514)
T KOG2055|consen 248 PKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE--TAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNG 325 (514)
T ss_pred hhheeeeeccCccceeeecCCCceEEEecccceEEEEeecc--ccccccccCCCCcccchhheeEecCCCCeEEEcccCc
Confidence 45666666678999999999999 99999999999999998 44555566666664 4577888999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece---eEEEEEEcCCCCE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV---RVNCLWCRSDGKS 445 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~---~v~~l~~s~~g~~ 445 (604)
.|.+....+++.+..+. ..+.|..++|+.+++.|++.+.+|.|++||++ ..++..|... .-++++.+++|.+
T Consensus 326 --~I~lLhakT~eli~s~K--ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~y 401 (514)
T KOG2055|consen 326 --HIHLLHAKTKELITSFK--IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSY 401 (514)
T ss_pred --eEEeehhhhhhhhheee--eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCce
Confidence 89999999999888776 45789999999999999999999999999995 5667777543 5678889999999
Q ss_pred EEEEeCCCeEEEEEcCCCc-------ccccccCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeEeeccccc
Q psy10566 446 VLAADTHHRIRTYNFEHLT-------DSNLLQEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRKFQGVTQG 516 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~-------~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~~~~~~~~ 516 (604)
+++|+..|.|.|||..+.. ...+......|+++.|+++...|+.++. +..+++..+.+......+......
T Consensus 402 lA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~ 481 (514)
T KOG2055|consen 402 LATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTK 481 (514)
T ss_pred EEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCc
Confidence 9999999999999976521 1222234678999999999999888776 567999999988887778777777
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
+..++++.|+|++.++|.|.++|.|.+|.+.
T Consensus 482 vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 482 VGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred ccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 7788999999999999999999999999874
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-20 Score=167.70 Aligned_cols=217 Identities=18% Similarity=0.265 Sum_probs=158.0
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-----EEEEecCCCCCCeEEEEEecCCCEEEEEecC-C
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G 414 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g 414 (604)
..+++|.+.|++++|+.||++|++++.|+ +|++|+++.-. +++.- -.-+..+.+.|.||.+-++..... .
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr--~Ir~w~~~DF~~~eHr~~R~n--ve~dhpT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDR--SIRLWDVRDFENKEHRCIRQN--VEYDHPTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCc--eEEEEecchhhhhhhhHhhcc--ccCCCceEEEECCCcceEEEEEccCC
Confidence 46789999999999999999999999999 89999997632 11111 112356888999988766655444 4
Q ss_pred eEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC
Q psy10566 415 QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 415 ~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 494 (604)
++++|.+..+.- |. ......-||-- .....|...+..+-+..++.++++++.|.
T Consensus 156 ~l~vyk~~K~~d----------------G~------~~~~~v~~D~~----~f~~kh~v~~i~iGiA~~~k~imsas~dt 209 (420)
T KOG2096|consen 156 KLCVYKLVKKTD----------------GS------GSHHFVHIDNL----EFERKHQVDIINIGIAGNAKYIMSASLDT 209 (420)
T ss_pred EEEEEEeeeccc----------------CC------CCccccccccc----ccchhcccceEEEeecCCceEEEEecCCC
Confidence 677776532211 00 00001112200 01112345666777888899999999999
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC---CC-----cceEEeeCCCCCeeEEE
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK---RE-----LPIATLSGHTRTVSCVA 566 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~---~~-----~~~~~l~~h~~~V~~v~ 566 (604)
.|.+|+++ |+.+..+....... ..+..+|+|+++++++..-.|++|.+- .| ..+..++||...|..++
T Consensus 210 ~i~lw~lk-Gq~L~~idtnq~~n---~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~a 285 (420)
T KOG2096|consen 210 KICLWDLK-GQLLQSIDTNQSSN---YDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAA 285 (420)
T ss_pred cEEEEecC-Cceeeeeccccccc---cceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeee
Confidence 99999998 77877776554432 235568999999999999999999874 22 34668899999999999
Q ss_pred EcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 567 WNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 567 ~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
|+|+ ...++|.|.||++||||.+-.
T Consensus 286 Fsn~-S~r~vtvSkDG~wriwdtdVr 310 (420)
T KOG2096|consen 286 FSNS-STRAVTVSKDGKWRIWDTDVR 310 (420)
T ss_pred eCCC-cceeEEEecCCcEEEeeccce
Confidence 9999 899999999999999998654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.5e-21 Score=192.19 Aligned_cols=241 Identities=16% Similarity=0.245 Sum_probs=190.5
Q ss_pred cEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCC
Q psy10566 303 EVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 303 ~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~ 380 (604)
.+..|+|.. +.++|||++..|.|.+||+... ...+.+..+..|+..|+++.|++.. .+|++|+.|+ .|++||++.
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~-~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg--~vK~~DlR~ 165 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKS-IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDG--TVKCWDLRS 165 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCcc-ccchhhhHhhhhccceeeeeeccCCccEEEecCCCc--eEEEEeeec
Confidence 345567764 4569999999999999999822 1244566888999999999999865 5677888888 899999998
Q ss_pred ceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
.+....+. +....|..+.|+| .+..|+++...|.+.+||++ .+....+..| +|.|+.|+|++.+|++|+.|+.|
T Consensus 166 ~~S~~t~~-~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~v 244 (839)
T KOG0269|consen 166 KKSKSTFR-SNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMV 244 (839)
T ss_pred cccccccc-ccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccE
Confidence 88777776 4567799999999 77899999999999999996 3555555555 79999999999999999999999
Q ss_pred EEEEcCCCc--ccccccCCCCeeEEEECCCCCEEEEEec---CCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCCCC
Q psy10566 456 RTYNFEHLT--DSNLLQEDHPVMSFTIDATDRLALLNVS---TQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 456 ~i~d~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
+|||..+.+ ....+....++.++.|-|...+.+..+. |-.|+|||++.. -+..+|..|...+..+ +|-+.+.
T Consensus 245 kiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i--~W~~~d~ 322 (839)
T KOG0269|consen 245 KIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGI--AWDSGDR 322 (839)
T ss_pred EEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccce--eccCCCc
Confidence 999998654 3445566889999999998766444333 667999999764 4567888888866555 3334556
Q ss_pred cEEEEEeCCCcEEEEeCCCC
Q psy10566 530 DFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~ 549 (604)
..+.+++.||+|..-.++++
T Consensus 323 ~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 323 INLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred eeeEeecCccHHHHhhhhcc
Confidence 78899999998876665544
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=180.18 Aligned_cols=294 Identities=19% Similarity=0.293 Sum_probs=229.1
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEe-eEEeccCCCCeeEEEECCC--CCeEEEEeCCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQH-RKTLEGHTLGVAYLAWSPD--SSHLLVVGPED 369 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~-~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~ 369 (604)
....|.+|.+.|..+.|+..|..|++||.|..|.+||.. .... ..-..+|...|....|-|. ...+++++.|+
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~----~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dg 209 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWV----SGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDG 209 (559)
T ss_pred hhhcccCCCCccceeeecccCceeeccCccceEEeehhh----ccCcccccccccccchhhhhccCCCCCcCceeccccC
Confidence 345688899999999999999999999999999999997 3333 3344578888888888774 56789999998
Q ss_pred ceEEEEEECCC-ceEE-EEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCC-e---eeeeec-----eeEEEE
Q psy10566 370 CHELWVWNIET-ELLR-VKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQ-V---LDSWEG-----VRVNCL 437 (604)
Q Consensus 370 ~~~i~vwd~~~-~~~~-~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~-~---~~~~~~-----~~v~~l 437 (604)
.+++=.+.. +.+. .+....|.++|..++.-|+. ..|.+++.|+.+.-+|+... . +..-.. .....+
T Consensus 210 --qvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~I 287 (559)
T KOG1334|consen 210 --QVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTI 287 (559)
T ss_pred --ceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeE
Confidence 677665433 3322 33334688999999999955 57899999999999998421 1 111111 246778
Q ss_pred EEcCCCC-EEEEEeCCCeEEEEEcCCCcccc-------cc------cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 438 WCRSDGK-SVLAADTHHRIRTYNFEHLTDSN-------LL------QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 438 ~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~-------~~------~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
+..|... .+++++.|..+++||.+...... .. .....|++++|+.++.-++++..|-.|+++.-..
T Consensus 288 a~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~ 367 (559)
T KOG1334|consen 288 AVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSM 367 (559)
T ss_pred ecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEecccc
Confidence 8888654 78999999999999987643221 11 1245689999999999999999999999995432
Q ss_pred --C----------ceee-EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 504 --R----------ILLR-KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 504 --~----------~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
| ..++ .|+||....+.-..-||+|...|+++||+-|.|.||+..+++.+..+.+....|+|+.=+|.
T Consensus 368 ~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~ 447 (559)
T KOG1334|consen 368 GDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPH 447 (559)
T ss_pred ccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCC
Confidence 2 2233 38899887664455688999999999999999999999999999999988789999999998
Q ss_pred CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
-.+|||+|-|..|+||.+.+.+
T Consensus 448 -~PvLAsSGid~DVKIWTP~~~e 469 (559)
T KOG1334|consen 448 -LPVLASSGIDHDVKIWTPLTAE 469 (559)
T ss_pred -CchhhccCCccceeeecCCccc
Confidence 8999999999999999995544
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-19 Score=168.35 Aligned_cols=288 Identities=17% Similarity=0.251 Sum_probs=211.2
Q ss_pred CcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCC---C--ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 302 DEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPV---T--FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 302 ~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~---~--~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.+|..+.|.+++. .||||+.|..|+||.++.. . .+......+..|...|+++.|+|+|+.|++|+.++ .|.+
T Consensus 14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g--~v~l 91 (434)
T KOG1009|consen 14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGG--EVFL 91 (434)
T ss_pred CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCc--eEEE
Confidence 5899999999877 9999999999999998732 2 24566778899999999999999999999999888 8999
Q ss_pred EECC--------C-----c--eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEE
Q psy10566 376 WNIE--------T-----E--LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCL 437 (604)
Q Consensus 376 wd~~--------~-----~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l 437 (604)
|... + . -.+.+...+|...|..++|+|++.++++++.|..+++||+ .|+......+| -+..+
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgv 171 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGV 171 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccccccee
Confidence 9766 2 1 1333444578899999999999999999999999999999 57877777665 68999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCccccccc--------------------C----CCCeeEEEECCCCCEEEEEec-
Q psy10566 438 WCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ--------------------E----DHPVMSFTIDATDRLALLNVS- 492 (604)
Q Consensus 438 ~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--------------------~----~~~i~~~~~s~~~~~l~~~~~- 492 (604)
+|.|-++++++-+.|...+.+++.......... | ..-...++|+|+|.++++...
T Consensus 172 awDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~ 251 (434)
T KOG1009|consen 172 AWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGL 251 (434)
T ss_pred ecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccce
Confidence 999999999999988877776664432211111 1 112345788999999887543
Q ss_pred ---C-----CeEEEEecCC-CceeeEeeccccceEEEEee---------------eCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 493 ---T-----QGVHLWDLRD-RILLRKFQGVTQGQFTIHSC---------------FGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 493 ---d-----g~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~---------------~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
. +..++|+-.. .++...+.+.......++++ +.-|-+-.+|.++ .+.|+|||.++
T Consensus 252 ~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydtq~ 330 (434)
T KOG1009|consen 252 FKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDTQT 330 (434)
T ss_pred eeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEecccc
Confidence 2 2235554332 23333444443333333332 1123344455554 55799999999
Q ss_pred CcceEEee-CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 549 ELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 549 ~~~~~~l~-~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..++.... -|-..|++++|+++ +..++..|.||.+.+-.+...+
T Consensus 331 ~~P~~~v~nihy~~iTDiaws~d-g~~l~vSS~DGyCS~vtfe~~e 375 (434)
T KOG1009|consen 331 LEPLAVVDNIHYSAITDIAWSDD-GSVLLVSSTDGFCSLVTFEPWE 375 (434)
T ss_pred ccceEEEeeeeeeeecceeecCC-CcEEEEeccCCceEEEEEcchh
Confidence 88888765 48899999999999 7888888999988776655544
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=175.38 Aligned_cols=205 Identities=18% Similarity=0.262 Sum_probs=154.6
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE-eccCCCCeeEEEECC--CCCeEEEEeCCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT-LEGHTLGVAYLAWSP--DSSHLLVVGPED 369 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~-l~~h~~~V~~l~~sp--d~~~l~s~~~d~ 369 (604)
..+.|.||++-|.|++|+.||.+|++||.|-.+.|||.- ..+.+.. -.||...|.++.|-| +++.+++|+.|.
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~----~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPF----EYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecch----hcceeeeeecccccceeEEeeeccCCCeEEEeccCcc
Confidence 346799999999999999999999999999999999986 4444444 458999999999988 456888888888
Q ss_pred ceEEEEEECCCc---------eEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCeee-----------e
Q psy10566 370 CHELWVWNIETE---------LLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQVLD-----------S 428 (604)
Q Consensus 370 ~~~i~vwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-----------~ 428 (604)
.|+++|+... +........|...|..++-.|++ ..|.+++.||+|+.+|++..... .
T Consensus 118 --~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~n 195 (758)
T KOG1310|consen 118 --LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVN 195 (758)
T ss_pred --eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHH
Confidence 8999999852 12222234677889999999988 78999999999999999531111 1
Q ss_pred eec--eeEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCc------------------cccccc--C--------C---CC
Q psy10566 429 WEG--VRVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLT------------------DSNLLQ--E--------D---HP 474 (604)
Q Consensus 429 ~~~--~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~------------------~~~~~~--~--------~---~~ 474 (604)
+.. ....|+.++|. ..++++|+.|-..++||.+... +...+. + . ..
T Consensus 196 y~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~ 275 (758)
T KOG1310|consen 196 YNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITC 275 (758)
T ss_pred hchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceee
Confidence 111 25788999996 5678889999999999943210 011111 0 0 12
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 475 VMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 475 i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
++-++|+|+|..+++.-....|+++|+..
T Consensus 276 ~t~vtfnpNGtElLvs~~gEhVYlfdvn~ 304 (758)
T KOG1310|consen 276 CTYVTFNPNGTELLVSWGGEHVYLFDVNE 304 (758)
T ss_pred eEEEEECCCCcEEEEeeCCeEEEEEeecC
Confidence 56688999999999998888899998854
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-19 Score=167.72 Aligned_cols=249 Identities=19% Similarity=0.247 Sum_probs=180.0
Q ss_pred ecccCCCcEEEEEEcCCCC--eEEEEECCCeEEEEEeCC------------CCceeEeeEEeccCCCCeeEEEECCCCC-
Q psy10566 296 VLNDHCDEVWFCKFSPDGL--KLATGSKDTTVIIWDVDP------------VTFTCQHRKTLEGHTLGVAYLAWSPDSS- 360 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~--~lasgs~dg~i~iwd~~~------------~~~~~~~~~~l~~h~~~V~~l~~spd~~- 360 (604)
..-+|.+.|..+.-++-|+ +.|+-+..|.|.||++.+ ......++.++.+|...=++++|||-..
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g 225 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG 225 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc
Confidence 3456888899888887654 667778899999999862 1234567889999999999999999332
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEe--cCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCeeeeeeceeEEEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKL--NHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCL 437 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l 437 (604)
.|++|...+ .|++|...+|...... ..+|...|-.++|+|.. ..|++|+.||+|+|||+
T Consensus 226 ~LlsGDc~~--~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDi---------------- 287 (440)
T KOG0302|consen 226 RLLSGDCVK--GIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDI---------------- 287 (440)
T ss_pred ccccCcccc--ceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEe----------------
Confidence 355555444 7999999887643321 13578888889998843 35555555555555554
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCC---cccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC---CceeeEee
Q psy10566 438 WCRSDGKSVLAADTHHRIRTYNFEHL---TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD---RILLRKFQ 511 (604)
Q Consensus 438 ~~s~~g~~l~~~~~dg~I~i~d~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~---~~~~~~~~ 511 (604)
+.+ .......|...|+.+.|+....+|++|+.||+++|||++. ++++..|+
T Consensus 288 -----------------------Rs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk 344 (440)
T KOG0302|consen 288 -----------------------RSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFK 344 (440)
T ss_pred -----------------------cCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEE
Confidence 443 1222344677899999999989999999999999999985 67889999
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc----------------eEEeeCC--CCCeeEEEEcCCCCc
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP----------------IATLSGH--TRTVSCVAWNPVYHQ 573 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~----------------~~~l~~h--~~~V~~v~~sp~~~~ 573 (604)
-|..++++|.+ .+.+...|++++.|..|.|||+....- -+-+--| ...|..|.|++.-+.
T Consensus 345 ~Hk~pItsieW--~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG 422 (440)
T KOG0302|consen 345 YHKAPITSIEW--HPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPG 422 (440)
T ss_pred eccCCeeEEEe--ccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCC
Confidence 99997666643 234557888999999999999863211 1112224 346889999998888
Q ss_pred EEEEEeCCCcEEEEC
Q psy10566 574 MIASVSDDCTVRIWG 588 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~ 588 (604)
+++|.+.|| +.||.
T Consensus 423 ~lvsTa~dG-fnVfk 436 (440)
T KOG0302|consen 423 LLVSTAIDG-FNVFK 436 (440)
T ss_pred eEEEecccc-eeEEE
Confidence 999999998 55554
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=172.29 Aligned_cols=244 Identities=17% Similarity=0.291 Sum_probs=179.8
Q ss_pred CCeEEEEECCCeEEEEEeCCCCc-----------------eeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTF-----------------TCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELW 374 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~-----------------~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~ 374 (604)
|+|+|.|+.|..|.|||++-... ..+.-..-.+|+..|.+++|+.+-+ .|++||.|. +|+
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~--TV~ 269 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADK--TVK 269 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCc--eEE
Confidence 67999999999999999872110 0011112347999999999988654 567777787 999
Q ss_pred EEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 375 VWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
+||+.++++...+. .|.+.|.++.|+| ....+++|+.|++|.+.|.+.
T Consensus 270 lWD~~~g~p~~s~~-~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~------------------------------ 318 (463)
T KOG0270|consen 270 LWDVDTGKPKSSIT-HHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD------------------------------ 318 (463)
T ss_pred EEEcCCCCcceehh-hcCCceeEEEecCCCceEEEeccccceEEeeeccC------------------------------
Confidence 99999999998887 6788999999999 456677777777776666532
Q ss_pred eEEEEEcCCCcccccccCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
...........+.|-.++|.|... .+++++.||+|+-+|+|.. +++.+++.|...+..+.. +.....+
T Consensus 319 --------~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~--n~~~p~~ 388 (463)
T KOG0270|consen 319 --------PSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSV--NIQTPGL 388 (463)
T ss_pred --------ccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEe--cCCCCcc
Confidence 001111222346688888988764 5677788999999999974 899999999998777743 3345568
Q ss_pred EEEEeCCCcEEEEeCCCCcceEE--eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCCCccc
Q psy10566 532 VASGSEDGKVYIWHVKRELPIAT--LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHL 599 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~--l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~~~~~ 599 (604)
+++++.|+.|++|++....+-.+ -.-.-+...|.++.|+....+|.||..+.++|||+.+...-...|
T Consensus 389 l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~kaF 458 (463)
T KOG0270|consen 389 LSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVRKAF 458 (463)
T ss_pred eeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHHHhh
Confidence 99999999999999875443222 111124567888899877889999999999999998876544433
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-20 Score=165.69 Aligned_cols=284 Identities=18% Similarity=0.227 Sum_probs=194.7
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
|..+...|++|.+.|+++.|..+++ |.+|..-|.|++|++. +......+. .|...|+.+.--|+ ..+.+-+.|
T Consensus 3 pPdP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lq----t~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd 76 (323)
T KOG0322|consen 3 PPDPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQ----TERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRD 76 (323)
T ss_pred CCCCeeEeccccchheehhhccchh-hhcccccceEEEEEee----cCccchhhhhhccceeeceeecCC-cchhhcCCC
Confidence 4456678889999999999998876 8889999999999998 444455566 46788999998887 467788888
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEec-----CCC---EEEEEecCCe--EEEEEcCCC-eeeeeec------
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-----DGT---KFVCGGIRGQ--FYQCDIEGQ-VLDSWEG------ 431 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~---~l~s~~~dg~--i~iwd~~~~-~~~~~~~------ 431 (604)
. .+.+|++..+..+..-. -.+.++-|.+ .++ .++.--..|. +.+-|.... .+.....
T Consensus 77 ~--~L~lw~ia~s~~i~i~S----i~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Kl 150 (323)
T KOG0322|consen 77 P--LLILWTIAYSAFISIHS----IVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKL 150 (323)
T ss_pred c--eEEEEEccCcceEEEee----eeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhcccc
Confidence 7 89999998765433211 2233333332 111 1111100010 111111100 0111110
Q ss_pred eeEEEEEEcC-CCC--EEEEEeCCCeEEEEEcCCCc-----------ccccccCCCCeeEEEECCCCCEEEEEecCCeEE
Q psy10566 432 VRVNCLWCRS-DGK--SVLAADTHHRIRTYNFEHLT-----------DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVH 497 (604)
Q Consensus 432 ~~v~~l~~s~-~g~--~l~~~~~dg~I~i~d~~~~~-----------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~ 497 (604)
..+.+..+.. ++. .+++|..+|.+.+||+.+.. ......+..++.++.+.+.-..=++|+.+..+.
T Consensus 151 gsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~ 230 (323)
T KOG0322|consen 151 GSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLV 230 (323)
T ss_pred CceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccce
Confidence 1344444222 233 46788889999999998852 222344688999999998777778888888899
Q ss_pred EEecCCC--ce-e-eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc
Q psy10566 498 LWDLRDR--IL-L-RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573 (604)
Q Consensus 498 lwd~~~~--~~-~-~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~ 573 (604)
.|++... .. + ........++..++ .-||++.+|+++.||+|+||+.++..++..++.|.+.|++++|+|+ ..
T Consensus 231 ~~Sl~~s~gslq~~~e~~lknpGv~gvr---IRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd-~~ 306 (323)
T KOG0322|consen 231 MYSLNHSTGSLQIRKEITLKNPGVSGVR---IRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPD-CE 306 (323)
T ss_pred eeeeccccCcccccceEEecCCCccceE---EccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCC-Cc
Confidence 9988643 21 1 11221222222332 2489999999999999999999999999999999999999999999 89
Q ss_pred EEEEEeCCCcEEEECC
Q psy10566 574 MIASVSDDCTVRIWGP 589 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~ 589 (604)
++|++|.|++|.+|++
T Consensus 307 lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 307 LMAAASKDARISLWKL 322 (323)
T ss_pred hhhhccCCceEEeeec
Confidence 9999999999999986
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=198.22 Aligned_cols=249 Identities=18% Similarity=0.298 Sum_probs=191.7
Q ss_pred CcEEEEEEcCCCCe----EEEEECCCeEEEEEeCC--CCceeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEE
Q psy10566 302 DEVWFCKFSPDGLK----LATGSKDTTVIIWDVDP--VTFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELW 374 (604)
Q Consensus 302 ~~V~~v~fspdg~~----lasgs~dg~i~iwd~~~--~~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~ 374 (604)
..-+.++|.+.|.. ||.|..||.|.+||... .......+.+...|++.|..+.|++... .|++|+.+| .|+
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~g--eI~ 142 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDG--EIL 142 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCC--cEE
Confidence 45778999988775 89999999999999884 2444556777888999999999999876 777777777 899
Q ss_pred EEECCCceEEEEe-cCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCC
Q psy10566 375 VWNIETELLRVKL-NHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 375 vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~d 452 (604)
+||+.+-+..... .....+.|.+++|+.. ...|++++.+|.+.+||++
T Consensus 143 iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr------------------------------ 192 (1049)
T KOG0307|consen 143 IWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR------------------------------ 192 (1049)
T ss_pred EeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc------------------------------
Confidence 9999886544444 2234567889999874 3455555655566666654
Q ss_pred CeEEEEEcCCCcccccccC---CCCeeEEEECCCC-CEEEEEecCC---eEEEEecCC-CceeeEeeccccceEEEEeee
Q psy10566 453 HRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATD-RLALLNVSTQ---GVHLWDLRD-RILLRKFQGVTQGQFTIHSCF 524 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~-~~l~~~~~dg---~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~ 524 (604)
..+....+.. ...+..++|+|+. ..+++++.|. .|.+||++. ..+++.+.+|..++..+.+|
T Consensus 193 ---------~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc- 262 (1049)
T KOG0307|consen 193 ---------KKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWC- 262 (1049)
T ss_pred ---------CCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccC-
Confidence 3322221111 1346789999987 4566666654 499999986 45778888999887666544
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..|..++++++.|+.|.+|+.++++.+..+......+..+.|+|....+++.++-||.|-|+.+....
T Consensus 263 -~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 263 -PQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred -CCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 45668999999999999999999999999998889999999999977899999999999999998765
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=172.52 Aligned_cols=259 Identities=13% Similarity=0.213 Sum_probs=199.3
Q ss_pred cEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 303 EVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 303 ~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
.|.++.|+.... .+|+.+.|..|++|.-.....+...+....+. .-.|++......|++++|..+ .|++||++.
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~--~Vkiwdl~~- 110 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEISGGQSG--CVKIWDLRA- 110 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhcceeeeccCcCc--eeeehhhHH-
Confidence 388999998764 23344568889999876333333334444443 334555555558999999988 799999994
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeee---ceeEEEEEEcCCCCE-EEEEeCCCeEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWE---GVRVNCLWCRSDGKS-VLAADTHHRIR 456 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~---~~~v~~l~~s~~g~~-l~~~~~dg~I~ 456 (604)
+.+.++...|.+.|+++.++....+|++++..|.|.+..+. +.....+. +..|.-+.+++..+. |.+++.+|.|.
T Consensus 111 kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~Vt 190 (673)
T KOG4378|consen 111 KLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVT 190 (673)
T ss_pred HHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEE
Confidence 44555556889999999999999999999999999999984 33333332 446788999998765 56778899999
Q ss_pred EEEcCCCccccc--ccCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEE
Q psy10566 457 TYNFEHLTDSNL--LQEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVA 533 (604)
Q Consensus 457 i~d~~~~~~~~~--~~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 533 (604)
+||+........ ..|..|...++|+|... ++++.+.|..|.+||++..+....+.... .+..++++++|.+|+
T Consensus 191 lwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~----Plstvaf~~~G~~L~ 266 (673)
T KOG4378|consen 191 LWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSH----PLSTVAFSECGTYLC 266 (673)
T ss_pred EEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecC----CcceeeecCCceEEE
Confidence 999988765543 34788999999999764 56677889999999999877666655332 345567789999999
Q ss_pred EEeCCCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCC
Q psy10566 534 SGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 534 sgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.|+..|.|+.||++. ..++.++..|...|++++|-|.
T Consensus 267 aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 267 AGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPS 304 (673)
T ss_pred eecCCceEEEEecccCCCCceEeeecccceeEEEeeec
Confidence 999999999999984 6789999999999999999886
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=163.48 Aligned_cols=205 Identities=18% Similarity=0.315 Sum_probs=166.0
Q ss_pred CCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCe-------e-eee--------ece--eEEEEEEcC-CCCEEEEE
Q psy10566 390 SPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQV-------L-DSW--------EGV--RVNCLWCRS-DGKSVLAA 449 (604)
Q Consensus 390 ~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~-------~-~~~--------~~~--~v~~l~~s~-~g~~l~~~ 449 (604)
.|.+.|.++...+ .|+++++|+.||.|.+||++... + +.. .+| .|..+.|-| |...+.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 5778899999988 78999999999999999994211 1 100 112 477777766 67788899
Q ss_pred eCCCeEEEEEcCCCcccccccCCCCeeEEEECCCC---CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCC
Q psy10566 450 DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGG 526 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~ 526 (604)
+.|.++++||..+......+..+..|.+-+++|-. -++++|..+-.|++.|+.+|...+++.||.+.+..+.+ +
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~W---s 197 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEW---S 197 (397)
T ss_pred cccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEe---c
Confidence 99999999999999888888888889998888854 47888888999999999999999999999998766643 3
Q ss_pred CC-CcEEEEEeCCCcEEEEeCCCC-cceEE--------------eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 527 AN-QDFVASGSEDGKVYIWHVKRE-LPIAT--------------LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 527 ~~-~~~l~sgs~dg~I~iwd~~~~-~~~~~--------------l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|. +-.|++|+.||.|++||++.. .+... -..|.+.|++++|..+ +.++++++.|..+++|+..
T Consensus 198 p~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd-~~~l~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 198 PSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSD-ARYLASCGTDDRIRVWNME 276 (397)
T ss_pred cCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeeccc-chhhhhccCccceEEeecc
Confidence 44 456789999999999999843 22222 3467789999999999 8999999999999999999
Q ss_pred CCCCCCcc
Q psy10566 591 LNTNKSPH 598 (604)
Q Consensus 591 ~~~~~~~~ 598 (604)
++++....
T Consensus 277 ~G~ntl~~ 284 (397)
T KOG4283|consen 277 SGRNTLRE 284 (397)
T ss_pred cCcccccc
Confidence 99865443
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.4e-19 Score=175.05 Aligned_cols=288 Identities=20% Similarity=0.221 Sum_probs=200.5
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceEE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHEL 373 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i 373 (604)
.....|.+.|..+.|-|....|++++.|.++++||++ .....-...+.||...|.++||.|.+. .|++|+.|+ .|
T Consensus 94 k~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk--~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg--~i 169 (720)
T KOG0321|consen 94 KKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVK--TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDG--EI 169 (720)
T ss_pred cccccccceeEeeccCCCceeEEEccCCceeeeeeec--cceeecceeecccccccchhhhccCCCcceeeccCCC--cE
Confidence 4556799999999999965689999999999999999 333333345889999999999999765 566777887 89
Q ss_pred EEEECCCceEE------EEe--------------------cCCCCCCeEE---EEEecCCCEEEEEec-CCeEEEEEcCC
Q psy10566 374 WVWNIETELLR------VKL--------------------NHSPEDSLTS---CSWNRDGTKFVCGGI-RGQFYQCDIEG 423 (604)
Q Consensus 374 ~vwd~~~~~~~------~~~--------------------~~~~~~~v~~---~~~~~~~~~l~s~~~-dg~i~iwd~~~ 423 (604)
.+||+.-...- ..+ ...+...|.+ +.+..|...|++++. |+.|++||++.
T Consensus 170 llWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk 249 (720)
T KOG0321|consen 170 LLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRK 249 (720)
T ss_pred EEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecc
Confidence 99998532200 000 0112233444 556678888888887 99999999942
Q ss_pred C-------ee--eeee-----ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCC-----CeeEEEECCCC
Q psy10566 424 Q-------VL--DSWE-----GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH-----PVMSFTIDATD 484 (604)
Q Consensus 424 ~-------~~--~~~~-----~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~-----~i~~~~~s~~~ 484 (604)
. .. ..+. .+.+.++.....|.++++.+.|+.|+.|++.+........+.+ --..-..+|++
T Consensus 250 ~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~ 329 (720)
T KOG0321|consen 250 NYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDD 329 (720)
T ss_pred cccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCC
Confidence 1 11 1111 2357888889999999999999999999998765433322211 12234568999
Q ss_pred CEEEEEecCCeEEEEecCCCc-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc-------------
Q psy10566 485 RLALLNVSTQGVHLWDLRDRI-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL------------- 550 (604)
Q Consensus 485 ~~l~~~~~dg~I~lwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~------------- 550 (604)
.++++|+.|...++|.+.+.+ ....+.+|...++.+.++.. +... ++++++|.+++||++..+-
T Consensus 330 ~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS-~~t~-v~TcSdD~~~kiW~l~~~l~e~~~adk~s~v~ 407 (720)
T KOG0321|consen 330 CSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPS-ATTP-VATCSDDFRVKIWRLSNGLEEIYAADKDSIVY 407 (720)
T ss_pred ceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccc-cCCC-ceeeccCcceEEEeccCchhhccccccchhhh
Confidence 999999999999999998754 45677899988888876543 4444 6666999999999997542
Q ss_pred -ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 551 -PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 551 -~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
....+++|...+..+.|+-. +.+.... -+..++|....
T Consensus 408 ~~~~rfk~~~p~~~nv~ss~~-~t~~~pR--~~~~r~~ssP~ 446 (720)
T KOG0321|consen 408 EYSRRFKGHLPQVLNVNSSLR-KTYKDPR--EGMNRISSSPV 446 (720)
T ss_pred hhhhhhhcccccccccccccc-ccccchh--hhccccccCcc
Confidence 22334566655666666543 2222222 44456665433
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-18 Score=157.06 Aligned_cols=287 Identities=17% Similarity=0.239 Sum_probs=209.2
Q ss_pred eecccCCCcEEEEEEcC-----CCCeEEEEECCCeEEEEEeCCCCceeEeeEEec--cCCCCeeEEEECCC----CCeEE
Q psy10566 295 QVLNDHCDEVWFCKFSP-----DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE--GHTLGVAYLAWSPD----SSHLL 363 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fsp-----dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~--~h~~~V~~l~~spd----~~~l~ 363 (604)
+..++|+.+|..++|++ .-..+||+| ...+.+|+....... ..++... .|......++|+-+ +.+++
T Consensus 32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d~~i-r~lq~y~D~d~~Esfytcsw~yd~~~~~p~la 109 (385)
T KOG1034|consen 32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGDGGI-RLLQSYADEDHDESFYTCSWSYDSNTGNPFLA 109 (385)
T ss_pred ehhccCCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCccce-eeeeeccCCCCCcceEEEEEEecCCCCCeeEE
Confidence 44568999999999985 234677776 457899998732211 2222222 36777888999654 45778
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcC-CCeeeeeec---e--eEEE
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIE-GQVLDSWEG---V--RVNC 436 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~-~~~~~~~~~---~--~v~~ 436 (604)
++|.-| .|++.|+.++++...+. +|...|..+.|+|+ .+++++++.|..|++|++. ..++..+.| | .|.+
T Consensus 110 ~~G~~G--vIrVid~~~~~~~~~~~-ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLS 186 (385)
T KOG1034|consen 110 AGGYLG--VIRVIDVVSGQCSKNYR-GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLS 186 (385)
T ss_pred eeccee--EEEEEecchhhhcccee-ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEE
Confidence 888776 89999999999888776 78999999999995 4789999999999999994 666666654 4 6999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-----------------------------CCCCeeEEEECCCCCEE
Q psy10566 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-----------------------------EDHPVMSFTIDATDRLA 487 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-----------------------------~~~~i~~~~~s~~~~~l 487 (604)
+.|+.+|.++++++.|..+++|++...+....+. |...|.|+.| -|+++
T Consensus 187 vD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw--~gd~i 264 (385)
T KOG1034|consen 187 VDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRW--FGDFI 264 (385)
T ss_pred EEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHH--Hhhhe
Confidence 9999999999999999999999998432211110 1112222222 25788
Q ss_pred EEEecCCeEEEEec-CCCc-------------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce-
Q psy10566 488 LLNVSTQGVHLWDL-RDRI-------------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI- 552 (604)
Q Consensus 488 ~~~~~dg~I~lwd~-~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~- 552 (604)
++-+.++.|..|.. +-++ .+..+.-.......+...+ .+-+++||.|...|.|++||++...+.
T Consensus 265 lSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~-d~~~~~la~gnq~g~v~vwdL~~~ep~~ 343 (385)
T KOG1034|consen 265 LSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAF-DPWQKMLALGNQSGKVYVWDLDNNEPPK 343 (385)
T ss_pred eecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEee-cHHHHHHhhccCCCcEEEEECCCCCCcc
Confidence 88888999999987 2222 2223333333444555443 477899999999999999999987663
Q ss_pred -EEeeCC--CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 553 -ATLSGH--TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 553 -~~l~~h--~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.++..+ ...|...+|+.| +.+|+...+|++|.-||.-
T Consensus 344 ~ttl~~s~~~~tVRQ~sfS~d-gs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 344 CTTLTHSKSGSTVRQTSFSRD-GSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred CceEEeccccceeeeeeeccc-CcEEEEEeCCCcEEEEEee
Confidence 233322 467999999999 8899999999999999854
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=157.76 Aligned_cols=255 Identities=19% Similarity=0.317 Sum_probs=183.7
Q ss_pred eecccCCCcEEEEEEcCCC-CeEEEEECC-------CeEEEEEeCCCCce-----eEeeEEec-cCCCCeeEEEECCCCC
Q psy10566 295 QVLNDHCDEVWFCKFSPDG-LKLATGSKD-------TTVIIWDVDPVTFT-----CQHRKTLE-GHTLGVAYLAWSPDSS 360 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg-~~lasgs~d-------g~i~iwd~~~~~~~-----~~~~~~l~-~h~~~V~~l~~spd~~ 360 (604)
++|..|.++|+.++-+|-. +.|+|+..+ ..+-||.+...-+. .+++..+. .+-+.|.|+.|.|++.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~ 136 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD 136 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence 4677789999999999954 466766432 24789998733222 33444454 4556899999999999
Q ss_pred eEEEEeCCCceEEEEEECCCceEE-EEec----CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLR-VKLN----HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVN 435 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~-~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~ 435 (604)
.+++.... .|.+|++..+..+ ..+. ..+....++-+|+|-
T Consensus 137 klasm~dn---~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspH-------------------------------- 181 (370)
T KOG1007|consen 137 KLASMDDN---NIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPH-------------------------------- 181 (370)
T ss_pred eeEEeccC---ceEEEEcccCcchheeecccccccccceecccccCCC--------------------------------
Confidence 99988744 5999999887653 2221 111222333334330
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCE-EEEEecCCeEEEEecCC-CceeeEee
Q psy10566 436 CLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRL-ALLNVSTQGVHLWDLRD-RILLRKFQ 511 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~-l~~~~~dg~I~lwd~~~-~~~~~~~~ 511 (604)
.+|+.++ ...|+++..||+++......+. |...+..+.|+|+-.+ |++++.||.|++||.+. ..++..+.
T Consensus 182 -----Hdgnqv~-tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~ 255 (370)
T KOG1007|consen 182 -----HDGNQVA-TTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELP 255 (370)
T ss_pred -----CccceEE-EeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccC
Confidence 1344333 3457788888888876655554 5678999999998765 66777889999999986 56788999
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC-----------------------------cceEEeeCCCCCe
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE-----------------------------LPIATLSGHTRTV 562 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~-----------------------------~~~~~l~~h~~~V 562 (604)
+|...+..+++- +...++|.+|+.|..|.+|...+- ..+.++..|+..|
T Consensus 256 ~HsHWvW~VRfn--~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSV 333 (370)
T KOG1007|consen 256 GHSHWVWAVRFN--PEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSV 333 (370)
T ss_pred CCceEEEEEEec--CccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccce
Confidence 999988887643 345679999999999999976421 1244677899999
Q ss_pred eEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 563 SCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 563 ~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+++|+.-++.+|||-|.||.+.|=++...
T Consensus 334 Y~~aWSsadPWiFASLSYDGRviIs~V~r~ 363 (370)
T KOG1007|consen 334 YALAWSSADPWIFASLSYDGRVIISSVPRF 363 (370)
T ss_pred EEEeeccCCCeeEEEeccCceEEeecCChh
Confidence 999999877999999999999999777654
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=171.97 Aligned_cols=242 Identities=17% Similarity=0.200 Sum_probs=193.1
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC--EEEEEecCCe
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT--KFVCGGIRGQ 415 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~ 415 (604)
.+...+.||++.|.+|...|.|.+|++|+.|| +|++|.+.+|.++..+. ..+.|.|++|+|.+. .|+++. ...
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDG--tvriWEi~TgRcvr~~~--~d~~I~~vaw~P~~~~~vLAvA~-~~~ 465 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDG--TVRIWEIATGRCVRTVQ--FDSEIRSVAWNPLSDLCVLAVAV-GEC 465 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCC--cEEEEEeecceEEEEEe--ecceeEEEEecCCCCceeEEEEe-cCc
Confidence 45567889999999999999999999999999 89999999999999987 456899999999765 333333 333
Q ss_pred EEEEEcC-C---------C------------------------------eeeeeeceeEEEEEEcCCCCEEEEEeCC---
Q psy10566 416 FYQCDIE-G---------Q------------------------------VLDSWEGVRVNCLWCRSDGKSVLAADTH--- 452 (604)
Q Consensus 416 i~iwd~~-~---------~------------------------------~~~~~~~~~v~~l~~s~~g~~l~~~~~d--- 452 (604)
+.+.+.. | . ++..-....|+.+.|+..|.++++...+
T Consensus 466 ~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~ 545 (733)
T KOG0650|consen 466 VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGN 545 (733)
T ss_pred eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCc
Confidence 4444320 1 0 0111112258889999999999988764
Q ss_pred CeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 453 HRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
..|.|+++.......-+ ...+.+.++.|+|...++++++.. .|++||+..+..++++..... .+..+..+|.|.-
T Consensus 546 ~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~k---wiS~msihp~GDn 621 (733)
T KOG0650|consen 546 KSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSK---WISSMSIHPNGDN 621 (733)
T ss_pred ceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCe---eeeeeeecCCCCe
Confidence 46899999876555444 457889999999999999998764 599999999888877664433 5666777899999
Q ss_pred EEEEeCCCcEEEEeCC-CCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 532 VASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~-~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|+.|+.|+.+..||+. +.++.+++..|...|++|+||+. -.+|+||++||++.|+.-
T Consensus 622 li~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~r-yPLfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 622 LILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKR-YPLFASGSDDGTVIVFHG 679 (733)
T ss_pred EEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccc-cceeeeecCCCcEEEEee
Confidence 9999999999999998 45788999999999999999998 799999999999999843
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-19 Score=166.01 Aligned_cols=223 Identities=17% Similarity=0.283 Sum_probs=155.1
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
.....|.+.++.+.-++-++-.++++....|.|.||++...-. .+. .....+..
T Consensus 145 ~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~--~l~-~~~~~~~~----------------------- 198 (440)
T KOG0302|consen 145 MKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLN--ALS-EPGLEVKD----------------------- 198 (440)
T ss_pred ccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhh--hhc-Cccccccc-----------------------
Confidence 3344588888888888877666666665556999999854211 000 00000000
Q ss_pred cCCCeeeeeece--eEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCc----ccccccCCCCeeEEEECCCC-CEEEEEec
Q psy10566 421 IEGQVLDSWEGV--RVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLT----DSNLLQEDHPVMSFTIDATD-RLALLNVS 492 (604)
Q Consensus 421 ~~~~~~~~~~~~--~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~----~~~~~~~~~~i~~~~~s~~~-~~l~~~~~ 492 (604)
...+.+.++.+| .-..++|||- ...+++|..-+.|++|...++. ...+..|...|-.++|||.. ..+++|+.
T Consensus 199 s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~ 278 (440)
T KOG0302|consen 199 SEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSC 278 (440)
T ss_pred cccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeec
Confidence 111222223333 2345566662 2236667677777777776642 23445588899999999976 56788889
Q ss_pred CCeEEEEecCCCc---eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC---CCcceEEeeCCCCCeeEEE
Q psy10566 493 TQGVHLWDLRDRI---LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK---RELPIATLSGHTRTVSCVA 566 (604)
Q Consensus 493 dg~I~lwd~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~---~~~~~~~l~~h~~~V~~v~ 566 (604)
||+|+|||++.+. ++. .+.|...+ ..+.|+.+..+||+|++||+++|||++ .++++.+++.|..+|++|.
T Consensus 279 DgsIrIWDiRs~~~~~~~~-~kAh~sDV---NVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsie 354 (440)
T KOG0302|consen 279 DGSIRIWDIRSGPKKAAVS-TKAHNSDV---NVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIE 354 (440)
T ss_pred CceEEEEEecCCCccceeE-eeccCCce---eeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEE
Confidence 9999999999873 332 25666644 445556666799999999999999998 4788999999999999999
Q ss_pred EcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 567 WNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 567 ~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|+|.....|+++|.|..|.|||+....
T Consensus 355 W~p~e~s~iaasg~D~QitiWDlsvE~ 381 (440)
T KOG0302|consen 355 WHPHEDSVIAASGEDNQITIWDLSVEA 381 (440)
T ss_pred eccccCceEEeccCCCcEEEEEeeccC
Confidence 999888899999999999999997654
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-19 Score=176.12 Aligned_cols=241 Identities=19% Similarity=0.310 Sum_probs=191.2
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
+...++|+||++.|+|++|+.||+.+|+|+.|..|.||+-. .+-+..+ .|.+.|.|+.|+|-...|++|+-..
T Consensus 43 G~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k-----lEG~LkY-SH~D~IQCMsFNP~~h~LasCsLsd- 115 (1081)
T KOG1538|consen 43 GTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK-----LEGILKY-SHNDAIQCMSFNPITHQLASCSLSD- 115 (1081)
T ss_pred cccccccccccceEEEEEEccCCceeccCCCceeEEEeccc-----ccceeee-ccCCeeeEeecCchHHHhhhcchhh-
Confidence 56788999999999999999999999999999999999865 1112222 3999999999999999999999886
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-----ceeEEEEEEcCCC--
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-----GVRVNCLWCRSDG-- 443 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~v~~l~~s~~g-- 443 (604)
.-+|.......... .....+.+++|..||.+++.|-.+|+|.+-+-.|+.-..+. ..+|.+++|+|..
T Consensus 116 --FglWS~~qK~V~K~---kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~ 190 (1081)
T KOG1538|consen 116 --FGLWSPEQKSVSKH---KSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGE 190 (1081)
T ss_pred --ccccChhhhhHHhh---hhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCC
Confidence 78998776543321 23467899999999999999999999999988654433332 2379999999963
Q ss_pred ---CEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 444 ---KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 444 ---~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
..+++.+...++.+|.+................|+.+.++|.++++|+.|+.+.+|- +.|-.+.++..... .|
T Consensus 191 G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~---WI 266 (1081)
T KOG1538|consen 191 GRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDS---WI 266 (1081)
T ss_pred CccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccce---eE
Confidence 468888888999999887654444444466778999999999999999999999986 45555555544333 45
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
..+...|++++++.|+.||+|-.|++.
T Consensus 267 WtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 267 WTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred EEEEEccCCceEEEEEccCeeehhhhH
Confidence 555567999999999999999999874
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.1e-17 Score=162.60 Aligned_cols=272 Identities=12% Similarity=0.163 Sum_probs=180.2
Q ss_pred EEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC-CceEEEEecCCCCCC
Q psy10566 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE-TELLRVKLNHSPEDS 394 (604)
Q Consensus 316 lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~-~~~~~~~~~~~~~~~ 394 (604)
+++...++.|.+|++.. .++...+..+. +......++++|++++|++++... ..|.+|++. ++.....-.......
T Consensus 5 y~~~~~~~~I~~~~~~~-~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~-~~i~~~~~~~~g~l~~~~~~~~~~~ 81 (330)
T PRK11028 5 YIASPESQQIHVWNLNH-EGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPE-FRVLSYRIADDGALTFAAESPLPGS 81 (330)
T ss_pred EEEcCCCCCEEEEEECC-CCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCC-CcEEEEEECCCCceEEeeeecCCCC
Confidence 34446789999999962 23445556665 345678899999999988776533 379999986 343321111122345
Q ss_pred eEEEEEecCCCEEEEEec-CCeEEEEEcC--CC---eeeeeec-eeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCccc
Q psy10566 395 LTSCSWNRDGTKFVCGGI-RGQFYQCDIE--GQ---VLDSWEG-VRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDS 466 (604)
Q Consensus 395 v~~~~~~~~~~~l~s~~~-dg~i~iwd~~--~~---~~~~~~~-~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~ 466 (604)
...++|+|+++++++++. ++.|.+|+++ +. .+....+ .....++++|+++++++++ .++.|.+||+.+....
T Consensus 82 p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l 161 (330)
T PRK11028 82 PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHL 161 (330)
T ss_pred ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcc
Confidence 678999999999888775 7899999985 32 2222222 2467788999999886655 4589999999763211
Q ss_pred c-------cccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCC--Cc--eeeEeeccc----cceEEEEeeeCCCCCc
Q psy10566 467 N-------LLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRD--RI--LLRKFQGVT----QGQFTIHSCFGGANQD 530 (604)
Q Consensus 467 ~-------~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~--~~--~~~~~~~~~----~~~~~i~~~~~~~~~~ 530 (604)
. ..........++|+|++++++++.. ++.|.+||+.. ++ .+..+.... ..... ..+.++|+++
T Consensus 162 ~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~i~~~pdg~ 240 (330)
T PRK11028 162 VAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWA-ADIHITPDGR 240 (330)
T ss_pred cccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccc-eeEEECCCCC
Confidence 1 1122445678999999999988876 89999999973 32 233332211 11111 1244579999
Q ss_pred EEEEEeC-CCcEEEEeCCCCcceEEeeCC---CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 531 FVASGSE-DGKVYIWHVKRELPIATLSGH---TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 531 ~l~sgs~-dg~I~iwd~~~~~~~~~l~~h---~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+++++.. ++.|.+|++.......++.++ ......++|+|++..++++...+++|.+|+++.
T Consensus 241 ~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 241 HLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred EEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence 9998865 789999999654322223222 124568999999444444555589999998754
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-18 Score=156.76 Aligned_cols=239 Identities=13% Similarity=0.132 Sum_probs=176.2
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~ 428 (604)
..|+.|++.|.+|++|+.+| .|.+||+.|...-..+ .+|..+|++++|++||+.|++++.|..|.+||+ .|.+++.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG--~vvI~D~~T~~iar~l-saH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~r 102 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANG--RVVIYDFDTFRIARML-SAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKR 102 (405)
T ss_pred cceEEeccCcceeeeeccCC--cEEEEEccccchhhhh-hccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeE
Confidence 78999999999999999999 8999999998754444 478899999999999999999999999999999 6888777
Q ss_pred eece-eEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcccccccC-----CCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 429 WEGV-RVNCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDSNLLQE-----DHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 429 ~~~~-~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
+.-. +|....|.|... .+++.-.+..-.+.++.......+... .....+..|.+.|+++++|...|.+.+||.
T Consensus 103 irf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a 182 (405)
T KOG1273|consen 103 IRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA 182 (405)
T ss_pred EEccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence 7643 788888988543 344444444455555554221111111 112233468999999999999999999999
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-------Ccc--eEEeeC--CCCCeeEEEEcCC
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-------ELP--IATLSG--HTRTVSCVAWNPV 570 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-------~~~--~~~l~~--h~~~V~~v~~sp~ 570 (604)
.+.+++..+.-.. ...|..+.++..|++++.-+.|..|+.|+++. +++ .+.+.. ..-.-.+++|+.+
T Consensus 183 ~t~e~vas~rits--~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~d 260 (405)
T KOG1273|consen 183 ETLECVASFRITS--VQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGD 260 (405)
T ss_pred chheeeeeeeech--heeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCC
Confidence 9999988887554 33566666778999999999999999999872 111 111111 1223467889998
Q ss_pred CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+..++|+...-..++||.-..|.
T Consensus 261 geYv~a~s~~aHaLYIWE~~~Gs 283 (405)
T KOG1273|consen 261 GEYVCAGSARAHALYIWEKSIGS 283 (405)
T ss_pred ccEEEeccccceeEEEEecCCcc
Confidence 44444444456789999987765
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-18 Score=157.83 Aligned_cols=270 Identities=11% Similarity=0.182 Sum_probs=199.5
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCCceEEEEEECCCceEEEEecCC-
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPEDCHELWVWNIETELLRVKLNHS- 390 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~- 390 (604)
..+|++-..|+|++||.. +++.+..++++...++.+.|.. ....+.+|+.|| +|++||+++......+...
T Consensus 41 ~~vav~lSngsv~lyd~~----tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG--~Vr~wD~Rs~~e~a~~~~~~ 114 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKG----TGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDG--TVRLWDIRSQAESARISWTQ 114 (376)
T ss_pred eeEEEEecCCeEEEEecc----chhhhheecCCCCcccceEEecCCCCCeeEEeccCC--eEEEEEeecchhhhheeccC
Confidence 568888899999999988 6778899999999999999976 456788999998 8999999887654444322
Q ss_pred -CCCCeEEEEEecCCCEEEEEec----CCeEEEEEcC--CCeeeeeec-e--eEEEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy10566 391 -PEDSLTSCSWNRDGTKFVCGGI----RGQFYQCDIE--GQVLDSWEG-V--RVNCLWCRSD-GKSVLAADTHHRIRTYN 459 (604)
Q Consensus 391 -~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~--~~~~~~~~~-~--~v~~l~~s~~-g~~l~~~~~dg~I~i~d 459 (604)
...+..+++.+..++.+++|+. +-.+.+||++ .+.+..+.. | .|+++.|.|. .+.|++|+.||-|.+||
T Consensus 115 ~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD 194 (376)
T KOG1188|consen 115 QSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFD 194 (376)
T ss_pred CCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeee
Confidence 2246677777667788888753 5689999995 343554432 2 6999999994 67899999999999999
Q ss_pred cCCCc----ccccccCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCceeeEeeccc----------cceEEEEeee
Q psy10566 460 FEHLT----DSNLLQEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVT----------QGQFTIHSCF 524 (604)
Q Consensus 460 ~~~~~----~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~----------~~~~~i~~~~ 524 (604)
+.... ....+.+...|.++.|..++ +.+.+-+...+..+|+++.+.+...+.... .-.+.|...
T Consensus 195 ~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~- 273 (376)
T KOG1188|consen 195 TKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEH- 273 (376)
T ss_pred cCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecc-
Confidence 98753 33456678889999998887 458888889999999999887655544321 112233322
Q ss_pred CCCCCcEEEEEeC-CCcEEEEeCC------CCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 525 GGANQDFVASGSE-DGKVYIWHVK------RELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 525 ~~~~~~~l~sgs~-dg~I~iwd~~------~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.++...+.++. -|...++-+. ..+.+..+.+ |...|.++.|... +.++.|||.||.+.+|....
T Consensus 274 ~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~-~~~l~TGGEDG~l~~Wk~~d 347 (376)
T KOG1188|consen 274 SPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVK-NDVLYTGGEDGLLQAWKVED 347 (376)
T ss_pred cCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcc-cceeeccCCCceEEEEecCC
Confidence 2344455555544 5555555443 2445666766 6778899999877 89999999999999999643
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-18 Score=164.12 Aligned_cols=268 Identities=12% Similarity=0.157 Sum_probs=198.9
Q ss_pred ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc--eEEEEecCCCCCCeEE
Q psy10566 320 SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPEDSLTS 397 (604)
Q Consensus 320 s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~--~~~~~~~~~~~~~v~~ 397 (604)
+...++++||+...+...+....- ....+.+++|+.... |++++..+...+++|.-... +... ......+.-.|
T Consensus 9 S~gd~~kl~D~s~~~~~~~~~~~t--~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~-~~k~~gd~~~C 84 (673)
T KOG4378|consen 9 STGDKTKLSDFSDLETKSEYVHQT--AEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPR-VRKLTGDNAFC 84 (673)
T ss_pred ccCCceEEeecccccCccccccCC--CCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccce-eeccccchHHH
Confidence 334579999998443333222222 233589999988764 66666655557888875433 1111 11112234556
Q ss_pred EEEecCCCEEEEEecCCeEEEEEcCCCee-eeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC--C
Q psy10566 398 CSWNRDGTKFVCGGIRGQFYQCDIEGQVL-DSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE--D 472 (604)
Q Consensus 398 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~--~ 472 (604)
++......++++|+..+.|+|||+..+.+ +...+| .|+++.+.....++++++..|.|.+..+.++.....+.+ .
T Consensus 85 v~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sg 164 (673)
T KOG4378|consen 85 VACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSG 164 (673)
T ss_pred HhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCC
Confidence 66666678999999999999999976554 444555 799999999999999999999999999998877666665 3
Q ss_pred CCeeEEEECCCCCEEE-EEecCCeEEEEecCCCceeeEee-ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 473 HPVMSFTIDATDRLAL-LNVSTQGVHLWDLRDRILLRKFQ-GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 473 ~~i~~~~~s~~~~~l~-~~~~dg~I~lwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
..+.-+.|+|..++++ +++.+|.|.+||+....++..+. .|..+...| |+.+.+..+|++.+.|..|++||+.+.+
T Consensus 165 qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gi--cfspsne~l~vsVG~Dkki~~yD~~s~~ 242 (673)
T KOG4378|consen 165 QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGI--CFSPSNEALLVSVGYDKKINIYDIRSQA 242 (673)
T ss_pred CeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcc--eecCCccceEEEecccceEEEeeccccc
Confidence 4566899999887655 56778999999999877766554 455544444 5555677899999999999999999877
Q ss_pred ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 551 PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 551 ~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
....+. ...+...|+|.++ +.+|+.|...|.|..||++....+
T Consensus 243 s~~~l~-y~~Plstvaf~~~-G~~L~aG~s~G~~i~YD~R~~k~P 285 (673)
T KOG4378|consen 243 STDRLT-YSHPLSTVAFSEC-GTYLCAGNSKGELIAYDMRSTKAP 285 (673)
T ss_pred ccceee-ecCCcceeeecCC-ceEEEeecCCceEEEEecccCCCC
Confidence 777765 4567899999999 899999999999999999887644
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-18 Score=153.82 Aligned_cols=236 Identities=19% Similarity=0.333 Sum_probs=182.5
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCce------------EEEEecCCCCCCeEEEEEe-------cCCCEEEEE
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL------------LRVKLNHSPEDSLTSCSWN-------RDGTKFVCG 410 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~------------~~~~~~~~~~~~v~~~~~~-------~~~~~l~s~ 410 (604)
...+.|+|||..|++-+.|+ .+.+|++.... ....+.......|...+|- |+..++++.
T Consensus 52 ~kgckWSPDGSciL~~sedn--~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s 129 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDN--CLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS 129 (406)
T ss_pred hccceeCCCCceEEeecccC--eeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence 34678999999999999998 79999874311 1111112234568888886 577899999
Q ss_pred ecCCeEEEEEc-CCCeeeeeece-------eEEEEEEcCCCCEEEEEeCCCeEEEEEc-CCCccccc---cc-----CCC
Q psy10566 411 GIRGQFYQCDI-EGQVLDSWEGV-------RVNCLWCRSDGKSVLAADTHHRIRTYNF-EHLTDSNL---LQ-----EDH 473 (604)
Q Consensus 411 ~~dg~i~iwd~-~~~~~~~~~~~-------~v~~l~~s~~g~~l~~~~~dg~I~i~d~-~~~~~~~~---~~-----~~~ 473 (604)
+.+.-|.+||. +|+.-.++... ...+++|+|||..|++|. ...|++||+ +.+..... +. ..+
T Consensus 130 sr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~g 208 (406)
T KOG2919|consen 130 SRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKG 208 (406)
T ss_pred cccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccc
Confidence 99999999998 67776666553 467899999999988775 568999999 44432221 22 256
Q ss_pred CeeEEEECCCCC-EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCC-Cc
Q psy10566 474 PVMSFTIDATDR-LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKR-EL 550 (604)
Q Consensus 474 ~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~-~~ 550 (604)
-+.+++|+|... .+++++-...+-||.-..+.++..+-+|.++++.+. +.++|+.+++|+. |-.|..||++. ..
T Consensus 209 iisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~---~~edGn~lfsGaRk~dkIl~WDiR~~~~ 285 (406)
T KOG2919|consen 209 IISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQ---WCEDGNKLFSGARKDDKILCWDIRYSRD 285 (406)
T ss_pred eeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEE---eccCcCeecccccCCCeEEEEeehhccc
Confidence 688999999765 888999888999999889999999999999766654 4589999999987 77899999984 67
Q ss_pred ceEEeeCCCC-CeeEE--EEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 551 PIATLSGHTR-TVSCV--AWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 551 ~~~~l~~h~~-~V~~v--~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++..+..|.+ .-..| ...|+ +.+|++|+.||.|++||++.-
T Consensus 286 pv~~L~rhv~~TNQRI~FDld~~-~~~LasG~tdG~V~vwdlk~~ 329 (406)
T KOG2919|consen 286 PVYALERHVGDTNQRILFDLDPK-GEILASGDTDGSVRVWDLKDL 329 (406)
T ss_pred hhhhhhhhccCccceEEEecCCC-CceeeccCCCccEEEEecCCC
Confidence 7888888865 22334 44677 899999999999999999883
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.7e-19 Score=172.48 Aligned_cols=263 Identities=14% Similarity=0.185 Sum_probs=197.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeC----CCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD----PVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~----~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~ 367 (604)
....++..|.+.|+.++|.|....|++++.||++++|++. ......+++.++.+|.++|.|++..+++..++++|.
T Consensus 285 ~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~ 364 (577)
T KOG0642|consen 285 NIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGI 364 (577)
T ss_pred ceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeecc
Confidence 3444888999999999999999999999999999999993 234467789999999999999999999999999999
Q ss_pred CCceEEEEEECCCc---------eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece----eE
Q psy10566 368 EDCHELWVWNIETE---------LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV----RV 434 (604)
Q Consensus 368 d~~~~i~vwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~v 434 (604)
|| +|+.|++... ..+.....+|.+.|+.+++++....|++++.||+++.|+..+.....+... ..
T Consensus 365 Dg--~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~P 442 (577)
T KOG0642|consen 365 DG--TIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYP 442 (577)
T ss_pred Cc--eeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCc
Confidence 99 8999965421 123333458999999999999999999999999999999854433333221 12
Q ss_pred EEEEEcCCC-CEEEEEeCCCeEEEEEcCCCccccccc--------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 435 NCLWCRSDG-KSVLAADTHHRIRTYNFEHLTDSNLLQ--------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 435 ~~l~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~~~~--------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
..+.+.... ...++...-+.-.++++.......++. ....+..+..+|...+.+++..|+.|+++|..+++
T Consensus 443 lsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~ 522 (577)
T KOG0642|consen 443 LSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGK 522 (577)
T ss_pred ceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccc
Confidence 233332222 222222222222333333322222221 12457788899999999999999999999999999
Q ss_pred eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC
Q psy10566 506 LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT 559 (604)
Q Consensus 506 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~ 559 (604)
++.....|... +.++++.|+|-+|++|+.||.|++|.+....++.....|.
T Consensus 523 ~l~s~~a~~~s---vtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 523 ILHSMVAHKDS---VTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred cchheeeccce---ecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 99988888774 4445667999999999999999999998887777766664
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-18 Score=162.41 Aligned_cols=252 Identities=16% Similarity=0.261 Sum_probs=187.1
Q ss_pred eeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEEEEECCCc---eEEEEecCCCCCCeEEEEEec-CCCEEEEEecC
Q psy10566 339 HRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELWVWNIETE---LLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIR 413 (604)
Q Consensus 339 ~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d 413 (604)
......-+...|++++|+|..+ .++++|..+ |.|-+||+.+. ..-..+...|..+|.++.|+| +...+++.+.|
T Consensus 178 ~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~-G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyD 256 (498)
T KOG4328|consen 178 ILNVAKVTDRRITSLAFHPTENRKLVAVGDKG-GQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYD 256 (498)
T ss_pred ecceeEecccceEEEEecccCcceEEEEccCC-CcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccC
Confidence 3455556889999999999876 455544443 59999999532 222233347889999999999 55789999999
Q ss_pred CeEEEEEcCCCeee---ee--eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECCCC-C
Q psy10566 414 GQFYQCDIEGQVLD---SW--EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATD-R 485 (604)
Q Consensus 414 g~i~iwd~~~~~~~---~~--~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~-~ 485 (604)
|+|+.-|+++.... .. .......+.|+.+...+++++.-|...+||.++... ....-|...|.+++++|-. .
T Consensus 257 GtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~ 336 (498)
T KOG4328|consen 257 GTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPW 336 (498)
T ss_pred ceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCch
Confidence 99999999764433 22 222567788888888899999888999999998654 3344467799999999976 5
Q ss_pred EEEEEecCCeEEEEecCCCceeeE-eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC----CCcceEEeeCCCC
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRK-FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK----RELPIATLSGHTR 560 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~----~~~~~~~l~~h~~ 560 (604)
++++++.|++.+|||++.-..... +-....+...|.+++++|.+--|++.+.|..|+|||.. .-.+..++. |..
T Consensus 337 ~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~ 415 (498)
T KOG4328|consen 337 FLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNN 415 (498)
T ss_pred heeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccC
Confidence 688999999999999987433322 11112222367777888988889999999999999984 344455554 421
Q ss_pred ------CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 561 ------TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 561 ------~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.....+|.|+ ..++++|-.-..|-|+|...++
T Consensus 416 ~t~RwlT~fKA~W~P~-~~li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 416 RTGRWLTPFKAAWDPD-YNLIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred cccccccchhheeCCC-ccEEEEeccCcceeEEcCCCCE
Confidence 2445689998 8999999999999999998876
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-16 Score=162.75 Aligned_cols=287 Identities=29% Similarity=0.455 Sum_probs=219.6
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEE-CCCCC-eEEEEeC-CCce
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAW-SPDSS-HLLVVGP-EDCH 371 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~-spd~~-~l~s~~~-d~~~ 371 (604)
.+.+|...|.++.|.+.+..++.++.|+.+.+|+..... .....+.++. ..+..+.+ ++++. .++..+. ++
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-- 134 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE---KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDG-- 134 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc---eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCc--
Confidence 567899999999999999999999999999999998221 2455555533 37777777 88888 4444344 55
Q ss_pred EEEEEECCC-ceEEEEecCCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCC-E
Q psy10566 372 ELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGK-S 445 (604)
Q Consensus 372 ~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~-~ 445 (604)
.+.+|+... ......+. .|...|..++|+|++..+++++. |+.+++|+.. +..+..+.++ .+.+++++|++. .
T Consensus 135 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 213 (466)
T COG2319 135 TVKLWDLSTPGKLIRTLE-GHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLL 213 (466)
T ss_pred cEEEEEecCCCeEEEEEe-cCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceE
Confidence 899999998 55555444 67888999999999998888886 9999999996 4666666654 799999999998 4
Q ss_pred EEEEeCCCeEEEEEcCCCcccc--cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce-eeEeeccccceEEEEe
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSN--LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL-LRKFQGVTQGQFTIHS 522 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~-~~~~~~~~~~~~~i~~ 522 (604)
+++++.|+.|++||........ ...+.... ...|++++.++++++.++.+++|++..... ...+.+|.. .+..
T Consensus 214 ~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~v~~ 289 (466)
T COG2319 214 IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSS---SVLS 289 (466)
T ss_pred EEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCc---cEEE
Confidence 5555999999999888554444 33344443 338999998999999999999999987665 444445544 3333
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee--CCCCCeeEEEEcCCCCcEEEEE-eCCCcEEEECCCCCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS--GHTRTVSCVAWNPVYHQMIASV-SDDCTVRIWGPHLNT 593 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~--~h~~~V~~v~~sp~~~~~l~s~-s~Dg~I~iW~~~~~~ 593 (604)
+.+.|++..+++++.|+.+.+||..+........ .|...+..+.| +.++..++.+ ..|+.+.+|+.....
T Consensus 290 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 290 VAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLRTGK 362 (466)
T ss_pred EEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCCCCEEEEeecCCCcEEeeecCCCc
Confidence 4556778888889999999999999888777766 78888999999 5322455555 688999999998776
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.8e-17 Score=172.13 Aligned_cols=296 Identities=14% Similarity=0.154 Sum_probs=208.0
Q ss_pred CccceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCC---ceeEeeEEeccCCCCeeEEEECCCCCeEEEE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVT---FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV 365 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~---~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~ 365 (604)
.+..+..|..|...|..++.++.. .+|+|||.||+|++|+..... +......++......+.++...+.+..++++
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence 456778899999999999888765 899999999999999987322 3334444555456789999999999999999
Q ss_pred eCCCceEEEEEECCCc--e-----EEEEecCCCCCCeEE-EEEec-CCC-EEEEEecCCeEEEEEcCCCe----e-eeee
Q psy10566 366 GPEDCHELWVWNIETE--L-----LRVKLNHSPEDSLTS-CSWNR-DGT-KFVCGGIRGQFYQCDIEGQV----L-DSWE 430 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~--~-----~~~~~~~~~~~~v~~-~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~----~-~~~~ 430 (604)
+.|| .|.+.+++.. . +.........+.+.+ -+|.. .+. .++.+...+.|..||+.... + ....
T Consensus 1117 t~DG--~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~ 1194 (1431)
T KOG1240|consen 1117 TKDG--SVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR 1194 (1431)
T ss_pred cCCC--eEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcc
Confidence 9998 8999888762 1 122222122233333 33433 333 68888888999999985321 1 1222
Q ss_pred ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCC---CEEEEE-e-cCCeEEEEecCC
Q psy10566 431 GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATD---RLALLN-V-STQGVHLWDLRD 503 (604)
Q Consensus 431 ~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~---~~l~~~-~-~dg~I~lwd~~~ 503 (604)
..-|++++.+|.+++++.|+..|.+.+||++-+....... +..++..+..+|-. ...+++ . ..+.|.+|++.+
T Consensus 1195 hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~ 1274 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMET 1274 (1431)
T ss_pred ccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeeccc
Confidence 3369999999999999999999999999998776655544 35677777777643 344444 3 467899999999
Q ss_pred CceeeEeecc-----------------ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce--------------
Q psy10566 504 RILLRKFQGV-----------------TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI-------------- 552 (604)
Q Consensus 504 ~~~~~~~~~~-----------------~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~-------------- 552 (604)
|.....+... ......+.++. ...+.++.+|+.|..|+.||....+..
T Consensus 1275 g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~-~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~ 1353 (1431)
T KOG1240|consen 1275 GLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGV-CEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTN 1353 (1431)
T ss_pred CcceEEEEcCCCCcchhhhcccccCCCCCcccceeeec-ccCCceeeecCCccceeeccCCCcccccccccCcccccccc
Confidence 8665555432 11111222222 244568999999999999997532111
Q ss_pred ---------------EE-------------------e--------eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 553 ---------------AT-------------------L--------SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 553 ---------------~~-------------------l--------~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.. + ..|..+|+++++......+|++++.||.|+||.
T Consensus 1354 ~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1354 SESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred chhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 00 0 247788999998776567999999999999995
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-18 Score=155.86 Aligned_cols=241 Identities=19% Similarity=0.319 Sum_probs=183.9
Q ss_pred cCCCcEEEEEEcCC----CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCceEE
Q psy10566 299 DHCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHEL 373 (604)
Q Consensus 299 ~H~~~V~~v~fspd----g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i 373 (604)
.|...-..|+|+-| ..++|.||.-|.|+|.|+. +.+....+.+|...|+.+.|+|+. +++++++.|. +|
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~----~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~--sv 160 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVV----SGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDH--SV 160 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecc----hhhhccceeccCccchhhhcCCCCCcEEEEecCCc--eE
Confidence 36777888898764 3389999999999999998 677788999999999999999986 5777888887 89
Q ss_pred EEEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee-------e---------eece---
Q psy10566 374 WVWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD-------S---------WEGV--- 432 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~---------~~~~--- 432 (604)
++|++++..++..+. .+|.+.|.++.|+++|.++++++.|.++++|+++.+... . +...
T Consensus 161 RlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~ 240 (385)
T KOG1034|consen 161 RLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTH 240 (385)
T ss_pred EEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccc
Confidence 999999999998886 478999999999999999999999999999998622111 0 1000
Q ss_pred ------------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-c----------cccccC----CC--CeeEEEECCC
Q psy10566 433 ------------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT-D----------SNLLQE----DH--PVMSFTIDAT 483 (604)
Q Consensus 433 ------------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~-~----------~~~~~~----~~--~i~~~~~s~~ 483 (604)
.|.|+.|- |+++++-+.++.|..|.....+ . ..++.+ .. ....++|+|-
T Consensus 241 fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~ 318 (385)
T KOG1034|consen 241 FPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPW 318 (385)
T ss_pred cccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHH
Confidence 11122111 5788899999999999873211 1 011111 11 2345677888
Q ss_pred CCEEEEEecCCeEEEEecCCCcee-eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 484 DRLALLNVSTQGVHLWDLRDRILL-RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 484 ~~~l~~~~~dg~I~lwd~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++.|+.|...|.|++||++..++. .+-..|......|+-..++.++.+|+...+|++|.-||..
T Consensus 319 ~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 319 QKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred HHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 999999999999999999987763 2222344445567777788999999999999999999864
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-19 Score=181.46 Aligned_cols=283 Identities=18% Similarity=0.254 Sum_probs=222.3
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+.++.|.||..+|+|+.|...|.++++|+.|..|+||..+ +..+...+.||.+.|+.++.+.+...+++++.|.
T Consensus 181 k~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~e----t~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~-- 254 (1113)
T KOG0644|consen 181 KNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSME----TARCLASCRGHSGDITDLAVSSNNTMIAAASNDK-- 254 (1113)
T ss_pred HHHHHHHhhhhheeeeeeccccceEeecCccceeeeeecc----chhhhccCCCCccccchhccchhhhhhhhcccCc--
Confidence 3455678999999999999999999999999999999987 7778899999999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee-------eeeceeEEEEEEcCCCC
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD-------SWEGVRVNCLWCRSDGK 444 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~~~~~v~~l~~s~~g~ 444 (604)
.|++|.+.++..+..+. +|.+.|++++|+|-. +.+.||++++||.+-.... .-.+.-+.++.|...+.
T Consensus 255 vIrvWrl~~~~pvsvLr-ghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~ 329 (1113)
T KOG0644|consen 255 VIRVWRLPDGAPVSVLR-GHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGD 329 (1113)
T ss_pred eEEEEecCCCchHHHHh-ccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccc
Confidence 89999999999887776 899999999999954 7789999999998622111 11223467778888889
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
.+++++.++.-..|.+...... ...+.-+..+.+ ..+.+++-.+-.+.+|++.+|...+...+|....+.+..-
T Consensus 330 ~f~Tgs~d~ea~n~e~~~l~~~-----~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~H 404 (1113)
T KOG0644|consen 330 RFLTGSRDGEARNHEFEQLAWR-----SNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVH 404 (1113)
T ss_pred ccccccCCcccccchhhHhhhh-----ccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeec
Confidence 9999999998888876542211 111111122212 2455666677789999999999999999999887776543
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
. -+.....+++.||...|||+-.|.+++......+.+..-+||++ +..++...+-|.+.|...-.+.
T Consensus 405 p--fn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqd-gts~~lsd~hgql~i~g~gqs~ 471 (1113)
T KOG0644|consen 405 P--FNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQD-GTSIALSDDHGQLYILGTGQSK 471 (1113)
T ss_pred C--CCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCC-CceEecCCCCCceEEeccCCCc
Confidence 3 34566778999999999999999888766544556777899999 7777777777889988775543
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.1e-18 Score=160.73 Aligned_cols=231 Identities=19% Similarity=0.267 Sum_probs=179.6
Q ss_pred cccCccccccccCcCcCCCCcccee---------------ecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCC
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQ---------------VLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVT 334 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~---------------~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~ 334 (604)
+.+++..-+||..+...-+|.-.+. .-.+|++.|.+++|+.+-+ .||+||.|.+|++||+.
T Consensus 198 Gtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~--- 274 (463)
T KOG0270|consen 198 GTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVD--- 274 (463)
T ss_pred eccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcC---
Confidence 4567778889987776666643332 2347999999999998755 89999999999999999
Q ss_pred ceeEeeEEeccCCCCeeEEEECCC-CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC-CCEEEEEec
Q psy10566 335 FTCQHRKTLEGHTLGVAYLAWSPD-SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGI 412 (604)
Q Consensus 335 ~~~~~~~~l~~h~~~V~~l~~spd-~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~ 412 (604)
++++..++..|.+.|.++.|+|. ...|++|+.|+ +|.+.|.+......... ...+.|-.++|.|. ...+++++.
T Consensus 275 -~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~--~V~l~D~R~~~~s~~~w-k~~g~VEkv~w~~~se~~f~~~td 350 (463)
T KOG0270|consen 275 -TGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDG--TVALKDCRDPSNSGKEW-KFDGEVEKVAWDPHSENSFFVSTD 350 (463)
T ss_pred -CCCcceehhhcCCceeEEEecCCCceEEEeccccc--eEEeeeccCccccCceE-EeccceEEEEecCCCceeEEEecC
Confidence 77788889999999999999996 56788899998 89999998422111111 13467999999994 467888899
Q ss_pred CCeEEEEEcC--CCeeeeeece--eEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCC
Q psy10566 413 RGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATD 484 (604)
Q Consensus 413 dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~ 484 (604)
||+++-+|++ ++.+.+...| .|.++++++. ...+++++.++.+++|++..........+ -+...|+++.|+-
T Consensus 351 dG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~ 430 (463)
T KOG0270|consen 351 DGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDV 430 (463)
T ss_pred CceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCc
Confidence 9999999995 6777777776 7999999885 55688899999999999987665444443 2346777888876
Q ss_pred C-EEEEEecCCeEEEEecCCCceee
Q psy10566 485 R-LALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 485 ~-~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
. .+++|+..+.+++||+.+...++
T Consensus 431 a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 431 AFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred ceEEEecCccceEEEeecccChhHH
Confidence 5 46677778889999998876654
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-17 Score=149.06 Aligned_cols=256 Identities=25% Similarity=0.340 Sum_probs=177.9
Q ss_pred eeecccCCCcEEEEEEcC--C-CCeEEEEE----CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC----eE
Q psy10566 294 TQVLNDHCDEVWFCKFSP--D-GLKLATGS----KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS----HL 362 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fsp--d-g~~lasgs----~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~----~l 362 (604)
+..+..| -.+.++.||. + +.+||.|| ..+.|.|-.++..+++...... ..|..+++.+.|.|+.. .+
T Consensus 38 iy~Y~ap-~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~-fd~~YP~tK~~wiPd~~g~~pdl 115 (364)
T KOG0290|consen 38 IYTYNAP-WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDAN-FDHPYPVTKLMWIPDSKGVYPDL 115 (364)
T ss_pred EEEecCC-CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCC-CCCCCCccceEecCCccccCcch
Confidence 3344433 4678888883 3 33788887 3567888887754444444344 35999999999999863 34
Q ss_pred EEEeCCCceEEEEEECCCceEEEEe--------cCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeeecee
Q psy10566 363 LVVGPEDCHELWVWNIETELLRVKL--------NHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWEGVR 433 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~~~~~--------~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 433 (604)
++.+.| .+++|.+......... ...+..++++..|+. +-+++.+++-|-+..+||+
T Consensus 116 LATs~D---~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdi------------ 180 (364)
T KOG0290|consen 116 LATSSD---FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDI------------ 180 (364)
T ss_pred hhcccC---eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEE------------
Confidence 444555 4999998743211111 123445677777765 4455555555555555555
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----cccccccCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCceee
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHL----TDSNLLQEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~----~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
+++ -...++.|..+|..++|...+ ..+++.+.||.|++||++..+...
T Consensus 181 ---------------------------e~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHST 233 (364)
T KOG0290|consen 181 ---------------------------ETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHST 233 (364)
T ss_pred ---------------------------eeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccce
Confidence 332 123556678888888888765 467788889999999998765443
Q ss_pred Ee-eccccceEEEEeeeCCCCCcEEEEEeCC-CcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 509 KF-QGVTQGQFTIHSCFGGANQDFVASGSED-GKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 509 ~~-~~~~~~~~~i~~~~~~~~~~~l~sgs~d-g~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
.+ +......-.++..+...+-+++|+-..| ..|.|.|++. ..++..+++|.+.|++++|.|.....|+|||+|..+.
T Consensus 234 IIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qal 313 (364)
T KOG0290|consen 234 IIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQAL 313 (364)
T ss_pred EEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEE
Confidence 33 3333233455666666777899987766 5699999985 6789999999999999999999889999999999999
Q ss_pred EECCCCCC
Q psy10566 586 IWGPHLNT 593 (604)
Q Consensus 586 iW~~~~~~ 593 (604)
|||+..-.
T Consensus 314 iWDl~q~~ 321 (364)
T KOG0290|consen 314 IWDLQQMP 321 (364)
T ss_pred EEeccccc
Confidence 99998654
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-15 Score=157.22 Aligned_cols=288 Identities=28% Similarity=0.448 Sum_probs=219.4
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d 368 (604)
......+.+|...|.+++|+|++.++++++. |+.+++|++. .......+.+|...|.+++|+|++. .+++++.|
T Consensus 145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 220 (466)
T COG2319 145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLR----TGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSD 220 (466)
T ss_pred CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcC----CCceEEeeccCCCceEEEEEcCCcceEEEEecCC
Confidence 4677889999999999999999998888885 9999999998 4566778888999999999999998 44444777
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe--eeeeec--eeEEEEEEcCCCC
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV--LDSWEG--VRVNCLWCRSDGK 444 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~--~~v~~l~~s~~g~ 444 (604)
+ .+.+||...+.........|...+ ...|+|++..+++++.|+.+++|+..... +....+ ..+.++.+.|++.
T Consensus 221 ~--~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 297 (466)
T COG2319 221 G--TIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGK 297 (466)
T ss_pred C--cEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCC
Confidence 7 788999887777763333555554 33899999999999999999999995322 333323 4788999999999
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccc---cCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLL---QEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
.+++++.|+.+.+||.......... .+...+..+.+.+++..++.+ ..|+.+.+|++.............. +
T Consensus 298 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~----~ 373 (466)
T COG2319 298 LLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN----V 373 (466)
T ss_pred EEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCce----E
Confidence 9888999988999998876544433 355568888884332556655 6788899999988762222222221 2
Q ss_pred EeeeCCCCCcEEEE-EeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 521 HSCFGGANQDFVAS-GSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 521 ~~~~~~~~~~~l~s-gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
....+.++ ..++. +..++.+.+|+............+...+....++++ +..+++++.++.+++|+...
T Consensus 374 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 374 LSVSFSPD-GRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPD-GKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred EEEEECCC-CCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCC-CcEEEEecCCCcEEEEeccC
Confidence 22333343 34444 788999999999988877777655478899999998 78888999999999999987
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=156.11 Aligned_cols=207 Identities=20% Similarity=0.315 Sum_probs=166.0
Q ss_pred ecccCCCcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCCCc---eeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCc
Q psy10566 296 VLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVTF---TCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDC 370 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~~~---~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~ 370 (604)
...||+++|..++|+|- ...|||||.|.+|.||++..... ....+..+.+|...|.-++|+|.- +.|+++|.|.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn- 154 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN- 154 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc-
Confidence 46799999999999994 55899999999999999873321 124578899999999999999975 5678888888
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeec---eeEEEEEEcCCCCEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEG---VRVNCLWCRSDGKSV 446 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~---~~v~~l~~s~~g~~l 446 (604)
+|.+||+.+|+....+. |.+.|+++.|+.||.++++++.|..|++||. .++.+..-.+ .+...+.|-.+|..+
T Consensus 155 -~v~iWnv~tgeali~l~--hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~ 231 (472)
T KOG0303|consen 155 -TVSIWNVGTGEALITLD--HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIF 231 (472)
T ss_pred -eEEEEeccCCceeeecC--CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCcee
Confidence 89999999999888876 8899999999999999999999999999999 4666655433 456677788888855
Q ss_pred EEEe---CCCeEEEEEcCCCcccc---cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCce
Q psy10566 447 LAAD---THHRIRTYNFEHLTDSN---LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRIL 506 (604)
Q Consensus 447 ~~~~---~dg~I~i~d~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~ 506 (604)
.+|. ++..+-+||........ .+.....|.---|+++.+.++.++ .|+.|+.|.+.+..+
T Consensus 232 tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 232 TTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPP 298 (472)
T ss_pred eeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCc
Confidence 5553 35679999987754432 233466777777889988876655 589999999987654
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-16 Score=164.09 Aligned_cols=288 Identities=16% Similarity=0.169 Sum_probs=207.7
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
.|.-.++|.++||+++++|+|..||.|.+|.--..+........+.-|...|.+++|+++|.+|++||..+ .+.+|.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~--VLv~Wq~ 280 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREG--VLVLWQL 280 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccce--EEEEEee
Confidence 47777999999999999999999999999975421122333566777999999999999999999999998 8999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeee-------------ceeEEEEEEcCCCC
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWE-------------GVRVNCLWCRSDGK 444 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~-------------~~~v~~l~~s~~g~ 444 (604)
.+++ .++...-.++|..+.++||+...+....|..|.+..... ....... ..-.+.++++|.-+
T Consensus 281 ~T~~--kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~ 358 (792)
T KOG1963|consen 281 ETGK--KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTN 358 (792)
T ss_pred cCCC--cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCC
Confidence 9998 444445678999999999999999999999999887621 1111111 11256788899888
Q ss_pred EEEEEeCCCeEEEEEcCCCccccccc------------CCCCeeEEEECCCCCEEEEEec--------CC--eEEEEecC
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQ------------EDHPVMSFTIDATDRLALLNVS--------TQ--GVHLWDLR 502 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~------------~~~~i~~~~~s~~~~~l~~~~~--------dg--~I~lwd~~ 502 (604)
.++..+..|.|.+||+-+.+....+. ..-.++.++.+..|.++++.-. || .+++|-..
T Consensus 359 ~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n 438 (792)
T KOG1963|consen 359 SLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYN 438 (792)
T ss_pred ceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEc
Confidence 88889999999999997765433221 1235677788888988887642 33 37778654
Q ss_pred CCc----eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC----------cceEEeeCCCCCeeEEEEc
Q psy10566 503 DRI----LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE----------LPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 503 ~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~----------~~~~~l~~h~~~V~~v~~s 568 (604)
... ....+....+....+.+....+.....++++.||.++||-+... .+...-..|..++++.+|+
T Consensus 439 ~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs 518 (792)
T KOG1963|consen 439 PNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFS 518 (792)
T ss_pred CCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhc
Confidence 432 22333322233333333333333348999999999999988321 2222222478899999999
Q ss_pred CCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.| | -+++++.|++|.+||..+.
T Consensus 519 ~d-G-slla~s~~~~Itiwd~~~~ 540 (792)
T KOG1963|consen 519 QD-G-SLLAVSFDDTITIWDYDTK 540 (792)
T ss_pred CC-C-cEEEEecCCEEEEecCCCh
Confidence 98 5 4556778999999999884
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.5e-18 Score=164.89 Aligned_cols=253 Identities=17% Similarity=0.227 Sum_probs=190.8
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC--------ceEEEEecCCCCCCeEEEEEecCCCEEE
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET--------ELLRVKLNHSPEDSLTSCSWNRDGTKFV 408 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 408 (604)
+....++..|...|+.+.|.|....|++++.++ ++.+|+++. -+.+..+. +|.++|.|+++.+++..++
T Consensus 284 w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~--~lk~WnLqk~~~s~~~~~epi~tfr-aH~gPVl~v~v~~n~~~~y 360 (577)
T KOG0642|consen 284 WNIKFTLRSHDDCIRALAFHPSEPVLITASEDG--TLKLWNLQKAKKSAEKDVEPILTFR-AHEGPVLCVVVPSNGEHCY 360 (577)
T ss_pred cceeeeeecchhhhhhhhcCCCCCeEEEecccc--chhhhhhcccCCccccceeeeEEEe-cccCceEEEEecCCceEEE
Confidence 444557888999999999999999999999999 899999932 13455665 8999999999999999999
Q ss_pred EEecCCeEEEEEcC-------C----Ceeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc--ccCCC
Q psy10566 409 CGGIRGQFYQCDIE-------G----QVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL--LQEDH 473 (604)
Q Consensus 409 s~~~dg~i~iwd~~-------~----~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~--~~~~~ 473 (604)
+|+.||+|+.|++. . .....+.|| .+..+++++....|++++.||+++.|+........+ .....
T Consensus 361 sgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g 440 (577)
T KOG0642|consen 361 SGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHG 440 (577)
T ss_pred eeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccC
Confidence 99999999999662 1 122334455 688999999999999999999999999877655222 22233
Q ss_pred CeeEEEECCCC-CEEEEEecCCeEEEEecCCCceeeEeeccccc----eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 474 PVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVTQG----QFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 474 ~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
...++.+-... .++++...-+.-.++++.....+..+...... ...+..+.+.|++.+.+++.+|+.|+++|..+
T Consensus 441 ~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~ 520 (577)
T KOG0642|consen 441 YPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKT 520 (577)
T ss_pred CcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccc
Confidence 44555554333 33333333343444444444444444322111 11233345568889999999999999999999
Q ss_pred CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 549 ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 549 ~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++++.....|...++++++.|+ +.+|++++.||.+++|.+....
T Consensus 521 ~~~l~s~~a~~~svtslai~~n-g~~l~s~s~d~sv~l~kld~k~ 564 (577)
T KOG0642|consen 521 GKILHSMVAHKDSVTSLAIDPN-GPYLMSGSHDGSVRLWKLDVKT 564 (577)
T ss_pred cccchheeeccceecceeecCC-CceEEeecCCceeehhhccchh
Confidence 9999999999999999999999 8999999999999999997654
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-16 Score=159.76 Aligned_cols=209 Identities=17% Similarity=0.183 Sum_probs=158.4
Q ss_pred CCccceeecccCCCcEEEEEEcCCCC---eEEEEECCCeEEEEEeCCCCceeEeeEEec---------------------
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGL---KLATGSKDTTVIIWDVDPVTFTCQHRKTLE--------------------- 344 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~---~lasgs~dg~i~iwd~~~~~~~~~~~~~l~--------------------- 344 (604)
....++..|.+|..++..+.+.|... ++.+++.||.|++||.... ..++++.
T Consensus 45 ~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~----~Llkt~~~~~~v~~~~~~~~~a~~s~~~ 120 (792)
T KOG1963|consen 45 ATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDG----ELLKTFDNNLPVHALVYKPAQADISANV 120 (792)
T ss_pred chHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCc----EEEEEEecCCceeEEEechhHhCcccee
Confidence 34677889999999999999998654 6789999999999998621 1111111
Q ss_pred --------------------------------------cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE---
Q psy10566 345 --------------------------------------GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL--- 383 (604)
Q Consensus 345 --------------------------------------~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~--- 383 (604)
.|.. -.+|.+++.|.+...+-.. .+.+|+..++..
T Consensus 121 ~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~ge~~~i~~~~---~~~~~~v~~~~~~~~ 196 (792)
T KOG1963|consen 121 YVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSGEFKGIVHMC---KIHIYFVPKHTKHTS 196 (792)
T ss_pred EeecccceeeeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEcCCceEEEEEEee---eEEEEEecccceeec
Confidence 1111 2345555555555554444 377888776441
Q ss_pred EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-------CeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEE
Q psy10566 384 RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-------QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIR 456 (604)
Q Consensus 384 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~ 456 (604)
.......|...+++.+++|+++++++|..||.|.+|.--+ ..+-.|+...|.+++|+++|.++++|+..+.+.
T Consensus 197 ~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv 276 (792)
T KOG1963|consen 197 SRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLV 276 (792)
T ss_pred cchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEE
Confidence 1222234666689999999999999999999999995422 234455666999999999999999999999999
Q ss_pred EEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 457 TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 457 i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
+|.+.+++...+..-..+|..+.++||+.+.++...|+.|.+....+..
T Consensus 277 ~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~ 325 (792)
T KOG1963|consen 277 LWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLE 325 (792)
T ss_pred EEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchh
Confidence 9999999866566678999999999999999999999999998875543
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-16 Score=149.58 Aligned_cols=276 Identities=16% Similarity=0.192 Sum_probs=195.7
Q ss_pred ccccCccccccccCcCcCCC---CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCC-------C-----C
Q psy10566 270 DESLENVSLLVDHLCTKEEF---PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP-------V-----T 334 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~---p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~-------~-----~ 334 (604)
+++.|.-.++|.+......- ..+....|..|..+|++|.|+|+|.+||+|+.+|.|.+|.... . .
T Consensus 31 T~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~k 110 (434)
T KOG1009|consen 31 TAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNK 110 (434)
T ss_pred cccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCc
Confidence 34446667777765544332 4556678999999999999999999999999999999998761 0 1
Q ss_pred ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC
Q psy10566 335 FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 335 ~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
..+...+.+.+|...|..++|+|++.++++++.|+ .+++||+..|....... .|...|..++|.|-++++++-+.|.
T Consensus 111 e~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn--s~~l~Dv~~G~l~~~~~-dh~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 111 EKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN--SVRLWDVHAGQLLAILD-DHEHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred cceEEEEEecccccchhhhhccCCCceeeeeeccc--eEEEEEeccceeEeecc-ccccccceeecchhhhhhhhhccCc
Confidence 23566778889999999999999999999999999 89999999999887776 7888999999999999999999888
Q ss_pred eEEEEEcCC----------------------Ceeeeeece----eEEEEEEcCCCCEEEEEeC----CC-----eEEEEE
Q psy10566 415 QFYQCDIEG----------------------QVLDSWEGV----RVNCLWCRSDGKSVLAADT----HH-----RIRTYN 459 (604)
Q Consensus 415 ~i~iwd~~~----------------------~~~~~~~~~----~v~~l~~s~~g~~l~~~~~----dg-----~I~i~d 459 (604)
..+.+.+.- ...+-++.. -...++|+|+|..+++.+. .+ ..++|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfs 267 (434)
T KOG1009|consen 188 HPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFS 267 (434)
T ss_pred ccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeec
Confidence 666665521 111112211 1345788999999887643 22 234444
Q ss_pred cCCCc--ccccccCCCCeeEEEECC------------------CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEE
Q psy10566 460 FEHLT--DSNLLQEDHPVMSFTIDA------------------TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 460 ~~~~~--~~~~~~~~~~i~~~~~s~------------------~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
-.... ...+-....+...+.++| ..-.+++++ .+.|++||.++..++.......- ..
T Consensus 268 rk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v~nihy--~~ 344 (434)
T KOG1009|consen 268 RKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVVDNIHY--SA 344 (434)
T ss_pred cccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEeccccccceEEEeeeee--ee
Confidence 33211 111111233444444443 223344444 45699999998877766553322 25
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
+.-++|+++|.+++..|.||...+--++..++
T Consensus 345 iTDiaws~dg~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 345 ITDIAWSDDGSVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred ecceeecCCCcEEEEeccCCceEEEEEcchhc
Confidence 56677889999999999999988877776543
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-16 Score=164.45 Aligned_cols=286 Identities=15% Similarity=0.190 Sum_probs=200.6
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC---CCCeeEEEECC--CCCeEEEEeCCCceEE
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH---TLGVAYLAWSP--DSSHLLVVGPEDCHEL 373 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h---~~~V~~l~~sp--d~~~l~s~~~d~~~~i 373 (604)
+....-..+.|+|-...++++...-.|+|||.+ .......+..+ ...|+.+.+-. |...+++|+.|| .|
T Consensus 1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e----~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dG--vI 1135 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWE----KGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDG--VI 1135 (1387)
T ss_pred cCCCCCceeeecCCCceeEEcCCcceEEEEecc----cCceeccccCCCCCCCccceeeeecccchhheeeeccCc--eE
Confidence 333455667888888889988777789999998 44445555443 35688888854 456889999998 89
Q ss_pred EEEECCC-----ceEEEEec------CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee-eeeec---eeEEEEE
Q psy10566 374 WVWNIET-----ELLRVKLN------HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL-DSWEG---VRVNCLW 438 (604)
Q Consensus 374 ~vwd~~~-----~~~~~~~~------~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~---~~v~~l~ 438 (604)
++|+--. .+.+.... .+..+.-.-+.|.....+++++|.-..|++||.+.+.. ....- .-++++.
T Consensus 1136 RIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS 1215 (1387)
T KOG1517|consen 1136 RIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALS 1215 (1387)
T ss_pred EEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeec
Confidence 9997422 12222211 11112224467888777888888889999999964433 33222 2355554
Q ss_pred EcC-CCCEEEEEeCCCeEEEEEcCCCcccc----cccCCCC--eeEEEECCCCC-EEEEEecCCeEEEEecCCCceeeEe
Q psy10566 439 CRS-DGKSVLAADTHHRIRTYNFEHLTDSN----LLQEDHP--VMSFTIDATDR-LALLNVSTQGVHLWDLRDRILLRKF 510 (604)
Q Consensus 439 ~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~----~~~~~~~--i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~~~~~~~ 510 (604)
.+- .|+.+++|..||.|++||.+...... ...|... |..+.+.+.|- .+++|+.+|.|++||++.......+
T Consensus 1216 ~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~ 1295 (1387)
T KOG1517|consen 1216 ADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFL 1295 (1387)
T ss_pred ccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccc
Confidence 443 47999999999999999998754422 2234444 99999998775 4999999999999999985333222
Q ss_pred e--ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-------CCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 511 Q--GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-------TRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 511 ~--~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-------~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
. .|......+.++..++....+|+|+. +.|+||++. |+.+..++.+ .+.+.|++|||. .-++|.|+.|
T Consensus 1296 ~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~-~~llAaG~~D 1372 (1387)
T KOG1517|consen 1296 TIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPH-RLLLAAGSAD 1372 (1387)
T ss_pred eeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccccCcccccCcCCCcceeeecch-hHhhhhccCC
Confidence 2 22211223566777788999999998 999999987 4444444332 357899999998 7899999999
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
.+|.||......
T Consensus 1373 s~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1373 STVSIYSCEKPR 1384 (1387)
T ss_pred ceEEEeecCCcC
Confidence 999999987654
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.6e-16 Score=159.32 Aligned_cols=262 Identities=17% Similarity=0.262 Sum_probs=194.1
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE-----EEEecCCCCCCeE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL-----RVKLNHSPEDSLT 396 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~-----~~~~~~~~~~~v~ 396 (604)
++.+.||++... ..+...+. -...|.+++|+|....+++||... |.|.+||+..+.. +......|..+++
T Consensus 221 ~~~~~vW~~~~p---~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~-GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~ 295 (555)
T KOG1587|consen 221 DGVLLVWSLKNP---NTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYN-GQVVLWDLRKGSDTPPSGLSALEVSHSEPVT 295 (555)
T ss_pred CceEEEEecCCC---CCceEEEe-cCCceeEEEeccCCcceEEeeccC-ceEEEEEccCCCCCCCcccccccccCCcCeE
Confidence 357999999843 22333333 457899999999887777766654 5999999987654 3344467889999
Q ss_pred EEEEecCCC--EEEEEecCCeEEEEEcCC-------Ceeee--------eeceeEEEEEEcC-CCCEEEEEeCCCeEEEE
Q psy10566 397 SCSWNRDGT--KFVCGGIRGQFYQCDIEG-------QVLDS--------WEGVRVNCLWCRS-DGKSVLAADTHHRIRTY 458 (604)
Q Consensus 397 ~~~~~~~~~--~l~s~~~dg~i~iwd~~~-------~~~~~--------~~~~~v~~l~~s~-~g~~l~~~~~dg~I~i~ 458 (604)
.+.|..+.. -|++++.||.|..|+++. ..... .....++++.|.+ +...+++|+..|.|..-
T Consensus 296 ~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~ 375 (555)
T KOG1587|consen 296 AVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKG 375 (555)
T ss_pred EEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEE
Confidence 999987544 499999999999998742 11111 1223688899988 46679999999998874
Q ss_pred EcCCCcc---------cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCC
Q psy10566 459 NFEHLTD---------SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 459 d~~~~~~---------~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
+-..... .....|.++|.++.++|-+..++..+.|.+++||... ...++..+..+... +....|+|.
T Consensus 376 ~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~---v~~vaWSpt 452 (555)
T KOG1587|consen 376 CRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDY---VTDVAWSPT 452 (555)
T ss_pred eccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccce---eeeeEEcCc
Confidence 4333221 1234468899999999998777777779999999987 66666666665553 334455554
Q ss_pred C-cEEEEEeCCCcEEEEeCCC--CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 529 Q-DFVASGSEDGKVYIWHVKR--ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 529 ~-~~l~sgs~dg~I~iwd~~~--~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
. ..++++..||.|.|||+.. ..++.+...+....+.+.|++. +.+|+.|...|++.+|++...
T Consensus 453 rpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~-g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 453 RPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPN-GKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred CceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCC-CcEEEEecCCCcEEEEEcCch
Confidence 4 5788888899999999974 4566666666677788999998 899999999999999999643
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-15 Score=131.22 Aligned_cols=272 Identities=15% Similarity=0.218 Sum_probs=191.3
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC------CceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV------TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~------~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
..|..-+++|.+++|+.|+.+|.|-+..+..- ......+...++|.++|+.++|. +.+|++|+. | .|+-
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gd-G--~V~g 85 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGD-G--LVYG 85 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccC-c--eEEE
Confidence 34667789999999999999999999998621 11123455668999999999998 446777664 6 6777
Q ss_pred EECCCceE------EEEe-c-----CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEc
Q psy10566 376 WNIETELL------RVKL-N-----HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCR 440 (604)
Q Consensus 376 wd~~~~~~------~~~~-~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s 440 (604)
|....... .... . ...-..|+++...|..+-++.++.|+.++.||+ +|+..+.+.+| -+.++..-
T Consensus 86 w~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R 165 (325)
T KOG0649|consen 86 WEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGR 165 (325)
T ss_pred eeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeec
Confidence 76543211 0000 0 011235889999998888888889999999999 58888899998 58888886
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCcccccccC-----------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDSNLLQE-----------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~-----------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
.....+++|+.||++++||.++.+....+.. ...|.+++. +...+++|. ...+.+|+++..++...
T Consensus 166 ~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t~v 242 (325)
T KOG0649|consen 166 NANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSESTCV 242 (325)
T ss_pred ccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCCceEE
Confidence 6667799999999999999999877665542 223445544 556777665 45599999999988877
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
|.-... +..+.| ..+.++++++.+.|.-|.+. |.+-..........++..|+..--+++..++..+.+.|..
T Consensus 243 fpipa~----v~~v~F--~~d~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 243 FPIPAR----VHLVDF--VDDCVLIGGEGNHVQSYTLN-GVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred Eecccc----eeEeee--ecceEEEeccccceeeeeec-cEEEEeccCCccceeeecccCCceEEEEecccceeeeeee
Confidence 764322 222222 34578888888889999865 5555555555556777777655124555566677777753
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.7e-16 Score=154.35 Aligned_cols=197 Identities=11% Similarity=0.140 Sum_probs=143.9
Q ss_pred eEEEEEec-CCCEEEEEecCCeEEEEEcCC----------CeeeeeeceeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCC
Q psy10566 395 LTSCSWNR-DGTKFVCGGIRGQFYQCDIEG----------QVLDSWEGVRVNCLWCRS-DGKSVLAADTHHRIRTYNFEH 462 (604)
Q Consensus 395 v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~ 462 (604)
|+.+.|.| |...|++++.||.|++|.+.. ..+...++.+|..+.|+| ..+.+++++.|.+|++||+.+
T Consensus 630 vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~ 709 (1012)
T KOG1445|consen 630 VTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLAN 709 (1012)
T ss_pred eeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhh
Confidence 88899999 788999999999999998831 122333445899999999 467788999999999999998
Q ss_pred Cccc-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCC--
Q psy10566 463 LTDS-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-- 538 (604)
Q Consensus 463 ~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-- 538 (604)
.+.. .+..|...|..++|+|+|+.+++.+.||+|++|+.++++ +++.-.+..+. ...+..| .-+|+++++.+.|
T Consensus 710 ~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgt-RgARi~w-acdgr~viv~Gfdk~ 787 (1012)
T KOG1445|consen 710 AKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGT-RGARILW-ACDGRIVIVVGFDKS 787 (1012)
T ss_pred hhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccC-cceeEEE-EecCcEEEEeccccc
Confidence 7654 456789999999999999999999999999999998764 33333333221 1122222 3678888877765
Q ss_pred --CcEEEEeCCC--CcceEEeeCCC-CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 539 --GKVYIWHVKR--ELPIATLSGHT-RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 539 --g~I~iwd~~~--~~~~~~l~~h~-~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..|.+||..+ +.++.+..-.. -.+.--.+.+|.+.+|+||-.|..|.+|.+-...
T Consensus 788 SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~es 847 (1012)
T KOG1445|consen 788 SERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYES 847 (1012)
T ss_pred chhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCC
Confidence 4688888764 33444432111 1122224566767789999999999999987655
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-15 Score=140.47 Aligned_cols=201 Identities=14% Similarity=0.156 Sum_probs=163.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce-eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT-CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
-..+|+|.+|++|+..+|.+-....|.||... ... .+...++..|...|++|+|+|..+.|++|+.|. .-++|..
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~--~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~dr--nayVw~~ 84 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSML--GADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDR--NAYVWTQ 84 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEec--CCCCceeceehhhhCcceeEEeecCCCCceeEccCCC--Ccccccc
Confidence 45789999999999999999999999999987 334 778899999999999999999999999999998 6999998
Q ss_pred -CCceE--EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-------eeeeeeceeEEEEEEcCCCCEEEE
Q psy10566 379 -ETELL--RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ-------VLDSWEGVRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 379 -~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~v~~l~~s~~g~~l~~ 448 (604)
..++. ...+ ..++..++++.|+|.++.|++|+.-..|.+|-.+++ .++.-....|.++.|.|++-.+++
T Consensus 85 ~~~~~WkptlvL-lRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa 163 (361)
T KOG1523|consen 85 PSGGTWKPTLVL-LRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA 163 (361)
T ss_pred CCCCeeccceeE-EEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence 44432 1122 145678999999999999999999999999988543 233333347999999999999999
Q ss_pred EeCCCeEEEEEcCC-----Cc-------------ccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 449 ADTHHRIRTYNFEH-----LT-------------DSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 449 ~~~dg~I~i~d~~~-----~~-------------~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
|+.|+..++|..-- .. ..... ...+.+..+.|+|+|..|+-.+.|..+.+-|.....
T Consensus 164 Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 164 GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 99999999997521 11 00111 236789999999999999999999999999976653
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-16 Score=162.58 Aligned_cols=234 Identities=18% Similarity=0.149 Sum_probs=165.9
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSW 400 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 400 (604)
+..|.+||.+ . .....+..|...+.+.+|||||+.|+.++.++ ...|++||+.++....... ..+....++|
T Consensus 183 ~~~i~i~d~d--g---~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~--~~g~~~~~~w 255 (429)
T PRK01742 183 PYEVRVADYD--G---FNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVAS--FRGHNGAPAF 255 (429)
T ss_pred eEEEEEECCC--C---CCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEec--CCCccCceeE
Confidence 5689999986 1 12345667888899999999999999887542 2479999998876433221 1223457899
Q ss_pred ecCCCEEEEEe-cCCeEEE--EEcCCCeeeeeece--eEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCc-ccccccCCC
Q psy10566 401 NRDGTKFVCGG-IRGQFYQ--CDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLT-DSNLLQEDH 473 (604)
Q Consensus 401 ~~~~~~l~s~~-~dg~i~i--wd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~-~~~~~~~~~ 473 (604)
+|||+.|+.++ .+|.+.+ ||+++.....+..+ .+....|+|||+.++.++ .++...+|++.... ....+.+..
T Consensus 256 SPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~ 335 (429)
T PRK01742 256 SPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRG 335 (429)
T ss_pred CCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCC
Confidence 99999888765 5776555 46655545544443 467899999999877655 56778888765422 122222222
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC--CCCcc
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV--KRELP 551 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~--~~~~~ 551 (604)
....|+|+|+.+++.+.++ +.+||+.++.......... .....++|+|++|+.++.+|.+.+|++ .+|..
T Consensus 336 --~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~-----~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~ 407 (429)
T PRK01742 336 --YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFL-----DESPSISPNGIMIIYSSTQGLGKVLQLVSADGRF 407 (429)
T ss_pred --CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCC-----CCCceECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence 4578999999998887765 6669998886543222221 122446799999999999998888876 36888
Q ss_pred eEEeeCCCCCeeEEEEcCC
Q psy10566 552 IATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 552 ~~~l~~h~~~V~~v~~sp~ 570 (604)
+..+.+|.+.+...+|+|-
T Consensus 408 ~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 408 KARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred eEEccCCCCCCCCcccCCC
Confidence 8999989998999999985
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-15 Score=151.24 Aligned_cols=249 Identities=8% Similarity=0.066 Sum_probs=165.3
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.++.+. +.+....++++|++++|++++ .++.|.+|+++ .++......... .......++|+|+++++++++..+ +
T Consensus 27 ~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~-~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~-~ 102 (330)
T PRK11028 27 LLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIA-DDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNA-N 102 (330)
T ss_pred eeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEEC-CCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCC-C
Confidence 444554 345677899999999887664 57889999997 223333333332 233567899999999999887643 4
Q ss_pred EEEEEECCCce----EEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCC-Ceee--------eeeceeEEEE
Q psy10566 372 ELWVWNIETEL----LRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIEG-QVLD--------SWEGVRVNCL 437 (604)
Q Consensus 372 ~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~-~~~~--------~~~~~~v~~l 437 (604)
.|.+|++++.. ....+. ......+++++|+++++++++ .++.|.+||++. ..+. ...+.....+
T Consensus 103 ~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~ 180 (330)
T PRK11028 103 CVSVSPLDKDGIPVAPIQIIE--GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHM 180 (330)
T ss_pred eEEEEEECCCCCCCCceeecc--CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceE
Confidence 89999997432 222221 223467889999999886655 568999999953 2221 1123356789
Q ss_pred EEcCCCCEEEEEeC-CCeEEEEEcCCC--cc--ccccc-------CCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCC
Q psy10566 438 WCRSDGKSVLAADT-HHRIRTYNFEHL--TD--SNLLQ-------EDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDR 504 (604)
Q Consensus 438 ~~s~~g~~l~~~~~-dg~I~i~d~~~~--~~--~~~~~-------~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~ 504 (604)
.|+|+|+++++++. ++.|.+|++... .. ...+. .......+.++|++++++++.. ++.|.+|++...
T Consensus 181 ~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~ 260 (330)
T PRK11028 181 VFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSED 260 (330)
T ss_pred EECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCC
Confidence 99999999988876 899999999732 21 11111 1112335889999999999865 688999999654
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCC
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVK 547 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~ 547 (604)
....++.++.........+.++++|++|++++. +++|.+|+++
T Consensus 261 ~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 261 GSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred CCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 322222222111111223455799999998776 8999999875
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.2e-17 Score=153.13 Aligned_cols=192 Identities=23% Similarity=0.317 Sum_probs=154.6
Q ss_pred EEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEE
Q psy10566 305 WFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLR 384 (604)
Q Consensus 305 ~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~ 384 (604)
.+++|+++|..|++|+.||++|||++. ....+.....|...|.++.|+|||+.|++.+.+. .+||++++|..+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~P----s~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d~---~~VW~~~~g~~~ 220 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWP----SMLTILEEIAHHAEVKDLDFSPDGKFLASIGADS---ARVWSVNTGAAL 220 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecC----cchhhhhhHhhcCccccceeCCCCcEEEEecCCc---eEEEEeccCchh
Confidence 779999999999999999999999987 5555667777999999999999999999999995 999999999766
Q ss_pred EEec-CCCCCCeEEEEEecCC---C--EEEEEecCCeEEEEEcC---C-Ceee---eeece-eEEEEEEcCCCCEEEEEe
Q psy10566 385 VKLN-HSPEDSLTSCSWNRDG---T--KFVCGGIRGQFYQCDIE---G-QVLD---SWEGV-RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 385 ~~~~-~~~~~~v~~~~~~~~~---~--~l~s~~~dg~i~iwd~~---~-~~~~---~~~~~-~v~~l~~s~~g~~l~~~~ 450 (604)
.... ...+.....|.|+.|+ . .++.....+.|..||+. + +.++ ....+ .|.+++++++|++++.|+
T Consensus 221 a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT 300 (398)
T KOG0771|consen 221 ARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGT 300 (398)
T ss_pred hhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEec
Confidence 6555 3344457788888877 3 33333445677777762 2 2222 22223 699999999999999999
Q ss_pred CCCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 451 THHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
.+|.|-+++..+.+...... |..-|+.+.|+|+.++++..+.+.++.+..+.-
T Consensus 301 ~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 301 MDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred cCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 99999999999887776665 677899999999999999999998888876643
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.8e-17 Score=173.32 Aligned_cols=242 Identities=16% Similarity=0.250 Sum_probs=176.3
Q ss_pred eEEEECCCCC-eEEEEeC----------CCceEEEEEECCCceE--EEEecCCCCCCeEEEEEecCCCE----EEEEecC
Q psy10566 351 AYLAWSPDSS-HLLVVGP----------EDCHELWVWNIETELL--RVKLNHSPEDSLTSCSWNRDGTK----FVCGGIR 413 (604)
Q Consensus 351 ~~l~~spd~~-~l~s~~~----------d~~~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~----l~s~~~d 413 (604)
..++|+|.+. ++++|.. +....|+-.|..+... ...-........+.++|.+.+.. |+.|..|
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~ed 89 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLED 89 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccC
Confidence 3568899886 3443321 2212344444444432 11111224456889999997766 8889999
Q ss_pred CeEEEEEcCC-------Ceeeeeece--eEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcccccc---cCCCCeeEEEE
Q psy10566 414 GQFYQCDIEG-------QVLDSWEGV--RVNCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDSNLL---QEDHPVMSFTI 480 (604)
Q Consensus 414 g~i~iwd~~~-------~~~~~~~~~--~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~~~---~~~~~i~~~~~ 480 (604)
|.|.+||... ..+.....| .|..+.|++.+. .+++|+.+|.|.|||+...+..... .....|.+++|
T Consensus 90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsW 169 (1049)
T KOG0307|consen 90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSW 169 (1049)
T ss_pred CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEecc
Confidence 9999999842 223333333 699999999755 9999999999999999885544333 24578999999
Q ss_pred CCCCC-EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC-cEEEEEeCCC---cEEEEeCCC-CcceEE
Q psy10566 481 DATDR-LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ-DFVASGSEDG---KVYIWHVKR-ELPIAT 554 (604)
Q Consensus 481 s~~~~-~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~sgs~dg---~I~iwd~~~-~~~~~~ 554 (604)
+..-. .|++++.+|.+.|||++..+++..+..+... ..+..+.|+|+. ..|+++++|. .|.+||++. ..++++
T Consensus 170 NrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~-~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~ 248 (1049)
T KOG0307|consen 170 NRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGR-MHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKI 248 (1049)
T ss_pred chhhhHHhhccCCCCCceeccccCCCcccccccCCCc-cceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhh
Confidence 87654 5667777889999999999888888776654 234455666765 4566666653 699999884 567888
Q ss_pred eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 555 LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 555 l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|...|.++.|++.+..+++|++.|+.|.+|+.++++
T Consensus 249 ~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 249 LEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE 287 (1049)
T ss_pred hcccccceeeeccCCCCchhhhcccCCCCeeEecCCCce
Confidence 999999999999999977999999999999999999976
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.4e-14 Score=130.75 Aligned_cols=283 Identities=16% Similarity=0.150 Sum_probs=199.0
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
...+..+.|+.|...|..|+.|| .++|+.++... ..........|.-+-|+. ..++..+.+....+++++...
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k----~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk 77 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEK----CFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKK 77 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHH----hhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEccc
Confidence 44677788999999999999998 57888763221 111111223455555654 467777765545799999998
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec---e--eEEEEEEcCCCCEEEEEe--CC
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG---V--RVNCLWCRSDGKSVLAAD--TH 452 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~---~--~v~~l~~s~~g~~l~~~~--~d 452 (604)
+..+..+. ....|.++.++. +.++++-.+. |++||++ -+.+.++.. + .+.++.+++.+.+++.-+ ..
T Consensus 78 ~~~ICe~~--fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~ 152 (391)
T KOG2110|consen 78 KTTICEIF--FPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTS 152 (391)
T ss_pred CceEEEEe--cCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCC
Confidence 88877776 346688988865 3555555444 9999995 455544432 2 355666666667777653 36
Q ss_pred CeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCe-EEEEecCCCceeeEeeccccceEEEEeeeCCCCCc
Q psy10566 453 HRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD 530 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~-I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 530 (604)
|.|.+||..+......+ .|.+++.+++|+++|.++++++..|+ ||+|.+.+|+.+..|..... ...|.++.|++++.
T Consensus 153 GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~-~~~IySL~Fs~ds~ 231 (391)
T KOG2110|consen 153 GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY-PVSIYSLSFSPDSQ 231 (391)
T ss_pred ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce-eeEEEEEEECCCCC
Confidence 89999999987766555 48999999999999999999999998 89999999999999985554 44566678889999
Q ss_pred EEEEEeCCCcEEEEeCCCCc-------------------------------------ceEEeeCCCCCe-eEEEEc--CC
Q psy10566 531 FVASGSEDGKVYIWHVKREL-------------------------------------PIATLSGHTRTV-SCVAWN--PV 570 (604)
Q Consensus 531 ~l~sgs~dg~I~iwd~~~~~-------------------------------------~~~~l~~h~~~V-~~v~~s--p~ 570 (604)
+|++.|+.++|+||.++.-. ...+........ ..+.+. +.
T Consensus 232 ~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~ 311 (391)
T KOG2110|consen 232 FLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQK 311 (391)
T ss_pred eEEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCC
Confidence 99999999999999886311 000011111111 223333 34
Q ss_pred CCcEEEEEeCCCcEEEECCCCCCCCCc
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNTNKSP 597 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~~~~~ 597 (604)
...+..++.||.+..|.++..+....
T Consensus 312 -~~~v~vas~dG~~y~y~l~~~~gGec 337 (391)
T KOG2110|consen 312 -IPRVLVASYDGHLYSYRLPPKEGGEC 337 (391)
T ss_pred -CCEEEEEEcCCeEEEEEcCCCCCcee
Confidence 56788889999999999987654433
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.2e-15 Score=138.81 Aligned_cols=277 Identities=16% Similarity=0.266 Sum_probs=192.0
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV 385 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~ 385 (604)
-++|||+|+++|+++.- .+.|-|.+ +.+..+.+. .-+.|..+.|..|..+++.+...+ +.|.+|++...+...
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~----tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~-~~vqvwsl~Qpew~c 85 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSE----TLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKD-PKVQVWSLVQPEWYC 85 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccc----hhhHHHHHH-HHHHhhheeeeccceeeeeeeecc-ceEEEEEeecceeEE
Confidence 47899999999999755 78888876 443333222 245688899999998887766544 489999999999888
Q ss_pred EecCCCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCee--eeeeceeEEEEEEcCCCCEEEEEeCC----------
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQVL--DSWEGVRVNCLWCRSDGKSVLAADTH---------- 452 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~--~~~~~~~v~~l~~s~~g~~l~~~~~d---------- 452 (604)
++.. ...++.+++|+|||+.+ .+...+-.|.+|.+..+.. ..+..+.+..++|++||++.+..+..
T Consensus 86 kIde-g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~ 164 (447)
T KOG4497|consen 86 KIDE-GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISS 164 (447)
T ss_pred Eecc-CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHh
Confidence 8874 45679999999999655 5566788999999954433 23344567888889988877665431
Q ss_pred --------------------------CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 453 --------------------------HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 453 --------------------------g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
..+.+||---.-.......+-.+..++|+|.++++++|+.|+.+++.+--+.+.
T Consensus 165 c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~ 244 (447)
T KOG4497|consen 165 CKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKP 244 (447)
T ss_pred hHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeee
Confidence 234455432111111222345788899999999999999999888754322100
Q ss_pred ------------------------------------------------------------eeEee---ccccceEEEEee
Q psy10566 507 ------------------------------------------------------------LRKFQ---GVTQGQFTIHSC 523 (604)
Q Consensus 507 ------------------------------------------------------------~~~~~---~~~~~~~~i~~~ 523 (604)
+.+++ ...++...+..+
T Consensus 245 f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~l 324 (447)
T KOG4497|consen 245 FGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKL 324 (447)
T ss_pred hhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCccccccee
Confidence 00011 011122234456
Q ss_pred eCCCCCcEEEEEeCC--CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 524 FGGANQDFVASGSED--GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 524 ~~~~~~~~l~sgs~d--g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++++|..|+++-.+. +.+.+||++..+.-..+. ...+|....|+|. ...|+.+.....+++|.+...
T Consensus 325 afs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~-~prL~vctg~srLY~W~psg~ 393 (447)
T KOG4497|consen 325 AFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPG-RPRLVVCTGKSRLYFWAPSGP 393 (447)
T ss_pred eecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCC-CceEEEEcCCceEEEEcCCCc
Confidence 778899888887553 679999999877655554 5678999999998 667777777778999988763
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.3e-16 Score=142.85 Aligned_cols=252 Identities=15% Similarity=0.208 Sum_probs=173.8
Q ss_pred ccceeecccCCCcEEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEeC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~~ 367 (604)
.+.+..+++|...+..++|.. ....+.+|+.||+|++||+. .........+..+. .+..|++..-.+..++++..
T Consensus 60 g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~R--s~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE 137 (376)
T KOG1188|consen 60 GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIR--SQAESARISWTQQSGTPFICLDLNCKKNIIACGTE 137 (376)
T ss_pred hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEee--cchhhhheeccCCCCCcceEeeccCcCCeEEeccc
Confidence 567788999999999999987 45689999999999999998 22333344555555 45666666656666666543
Q ss_pred C--CceEEEEEECCCceE-EEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCC-----eeeeee-ceeEEEE
Q psy10566 368 E--DCHELWVWNIETELL-RVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQ-----VLDSWE-GVRVNCL 437 (604)
Q Consensus 368 d--~~~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~-~~~v~~l 437 (604)
- ....|.+||++..+. +..+...|.+.|+++.|+| +.+.|++|+.||-|.+||+++. .+..+. +..|.++
T Consensus 138 ~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~i 217 (376)
T KOG1188|consen 138 LTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLI 217 (376)
T ss_pred cccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeee
Confidence 1 123799999998876 7777778999999999999 6689999999999999999543 222222 2358888
Q ss_pred EEcCCC-CEEEEEeCCCeEEEEEcCCCcccccccCC-------------CCeeEEEECCCCCEEEEEec-CCeEEEEecC
Q psy10566 438 WCRSDG-KSVLAADTHHRIRTYNFEHLTDSNLLQED-------------HPVMSFTIDATDRLALLNVS-TQGVHLWDLR 502 (604)
Q Consensus 438 ~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~~~~~~-------------~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~ 502 (604)
.|..++ +.+.+-+..++..+|+++.+.....+... ..+.......+....++++. -+...++-+.
T Consensus 218 gw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~ 297 (376)
T KOG1188|consen 218 GWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLV 297 (376)
T ss_pred eeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEee
Confidence 888776 56888899999999999887644333211 11111111223344444443 4554444333
Q ss_pred ---C---CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 503 ---D---RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 503 ---~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
+ ...+..+.++.. ..++.+++...+.++++|++||.+.+|..
T Consensus 298 ~~~s~~~~~~~a~l~g~~~--eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 298 DTSSGSLLTEPAILQGGHE--EIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred ecccccccCccccccCCcH--HHHHHHhhhcccceeeccCCCceEEEEec
Confidence 2 233445554322 24556666678899999999999999985
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.1e-15 Score=134.46 Aligned_cols=216 Identities=15% Similarity=0.264 Sum_probs=141.4
Q ss_pred ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce----EEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEE
Q psy10566 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL----LRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFY 417 (604)
Q Consensus 344 ~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~ 417 (604)
.+|.+-|+++.|.+.|+.+++|+.|. +++|||..... +..... .|.+.|..+.|.+ -|+.+++++.|+++.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq--~vkI~d~~~~s~~W~~Ts~Wr-ah~~Si~rV~WAhPEfGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQ--TVKIWDSTSDSGTWSCTSSWR-AHDGSIWRVVWAHPEFGQVVATCSYDRTVS 86 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCC--cEEEEeccCCCCceEEeeeEE-ecCCcEEEEEecCccccceEEEEecCCcee
Confidence 46888999999999999999999999 89999965432 333333 6888999999976 588999999999999
Q ss_pred EEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCC--CCEEEEEecCCe
Q psy10566 418 QCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT--DRLALLNVSTQG 495 (604)
Q Consensus 418 iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~ 495 (604)
+|.-....... + |+ -|. +...+......|+.+.|.|. |-.+++++.||.
T Consensus 87 iWEE~~~~~~~---~----------~~------------~Wv----~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~ 137 (361)
T KOG2445|consen 87 IWEEQEKSEEA---H----------GR------------RWV----RRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGI 137 (361)
T ss_pred eeeeccccccc---c----------cc------------eeE----EEEEeecCCcceeEEEecchhcceEEEEeccCcE
Confidence 99753111100 0 00 000 00011112344555555553 344555555666
Q ss_pred EEEEecCCC------ceeeEee-------ccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCC----cceE
Q psy10566 496 VHLWDLRDR------ILLRKFQ-------GVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRE----LPIA 553 (604)
Q Consensus 496 I~lwd~~~~------~~~~~~~-------~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~----~~~~ 553 (604)
+|||+.... .....++ .+.....++..+..-....+||.|+.+ +.++||....+ ..+.
T Consensus 138 lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva 217 (361)
T KOG2445|consen 138 LRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVA 217 (361)
T ss_pred EEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeeh
Confidence 666654321 1111121 233334455444333345688888876 57899987643 3567
Q ss_pred EeeCCCCCeeEEEEcCCCC---cEEEEEeCCCcEEEECCCCC
Q psy10566 554 TLSGHTRTVSCVAWNPVYH---QMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 554 ~l~~h~~~V~~v~~sp~~~---~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++.+|..+|++++|.|+-+ .+||+++.|| |+||++...
T Consensus 218 ~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~ 258 (361)
T KOG2445|consen 218 ELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVA 258 (361)
T ss_pred hcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeec
Confidence 7889999999999999733 5799999999 999999853
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7e-15 Score=153.24 Aligned_cols=212 Identities=18% Similarity=0.214 Sum_probs=151.1
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe-CCC
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG-PED 369 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~-~d~ 369 (604)
.+.+..|...|.+.+|||||+.||.++.+ ..|++||+. ++....+..+.+|. ..++|+|||+.|+.++ .++
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~--tg~~~~l~~~~g~~---~~~~wSPDG~~La~~~~~~g 270 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLR--SGARKVVASFRGHN---GAPAFSPDGSRLAFASSKDG 270 (429)
T ss_pred ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCC--CCceEEEecCCCcc---CceeECCCCCEEEEEEecCC
Confidence 45677888899999999999999988754 369999997 33334444455543 4689999999988875 466
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEc--CCCeeeeeeceeEEEEEEcCCCCEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDI--EGQVLDSWEGVRVNCLWCRSDGKSV 446 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~v~~l~~s~~g~~l 446 (604)
...|++||+.++.... +. .+...+....|+|||+.++.++ .+|...+|++ .+.......... ....++|+|+.+
T Consensus 271 ~~~Iy~~d~~~~~~~~-lt-~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~-~~~~~SpDG~~i 347 (429)
T PRK01742 271 VLNIYVMGANGGTPSQ-LT-SGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRG-YSAQISADGKTL 347 (429)
T ss_pred cEEEEEEECCCCCeEe-ec-cCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCC-CCccCCCCCCEE
Confidence 4467778887776543 33 3445678899999999877665 5677777776 333333222212 456799999999
Q ss_pred EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEec--CCCceeeEeecccc
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDL--RDRILLRKFQGVTQ 515 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~--~~~~~~~~~~~~~~ 515 (604)
++.+.++ +.+||+.++........ ....++.|+|+|++++.++.++.+.+|++ .++...+.+..+..
T Consensus 348 a~~~~~~-i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g 416 (429)
T PRK01742 348 VMINGDN-VVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDG 416 (429)
T ss_pred EEEcCCC-EEEEECCCCCeEEecCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCC
Confidence 8887765 55699987754433322 23456789999999999999998888876 35777777776654
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.8e-14 Score=146.58 Aligned_cols=235 Identities=15% Similarity=0.143 Sum_probs=162.7
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-CceEEEEEECCCceEEEEecCCCCCCeEEEEEe
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-DCHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 401 (604)
..|.+||.+ ... ...+..+...+.+.+|||||+.|+..+.. +...+++|++.+++...... ....+....|+
T Consensus 179 ~~l~~~d~d--g~~---~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~--~~~~~~~~~~S 251 (429)
T PRK03629 179 YELRVSDYD--GYN---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS--FPRHNGAPAFS 251 (429)
T ss_pred eeEEEEcCC--CCC---CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccC--CCCCcCCeEEC
Confidence 468888876 211 23344466789999999999999876532 22479999999886543322 22345578999
Q ss_pred cCCCEEEEE-ecCC--eEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCC-C--eEEEEEcCCCcccccccCCC
Q psy10566 402 RDGTKFVCG-GIRG--QFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTH-H--RIRTYNFEHLTDSNLLQEDH 473 (604)
Q Consensus 402 ~~~~~l~s~-~~dg--~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~d-g--~I~i~d~~~~~~~~~~~~~~ 473 (604)
|||+.++.. +.+| .|++||+++.....+... .+....|+|||+.++..+.+ + .|+.+|+.++....+.....
T Consensus 252 PDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~ 331 (429)
T PRK03629 252 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGS 331 (429)
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCC
Confidence 999988865 3344 588999975544444332 56788999999988877664 3 45555776655444443444
Q ss_pred CeeEEEECCCCCEEEEEecC---CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc---EEEEeCC
Q psy10566 474 PVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK---VYIWHVK 547 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~---I~iwd~~ 547 (604)
......|+|+|++++....+ ..|++||+.++... .+..... .....++|||++|+.++.++. ++++++
T Consensus 332 ~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~----~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~- 405 (429)
T PRK03629 332 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTFL----DETPSIAPNGTMVIYSSSQGMGSVLNLVST- 405 (429)
T ss_pred CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCCC----CCCceECCCCCEEEEEEcCCCceEEEEEEC-
Confidence 56678999999999887654 35889999887643 3332111 112345799999999988764 677777
Q ss_pred CCcceEEeeCCCCCeeEEEEcCC
Q psy10566 548 RELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
+|.....+.+|.+.+...+|+|-
T Consensus 406 ~G~~~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 406 DGRFKARLPATDGQVKFPAWSPY 428 (429)
T ss_pred CCCCeEECccCCCCcCCcccCCC
Confidence 46667788888889999999983
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.5e-15 Score=143.42 Aligned_cols=187 Identities=17% Similarity=0.246 Sum_probs=148.3
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+.-+....|.+.|.|-.|+|||.-|+|++.||.|++|.-. +....++-....+|+|++|.|+++.++.|..+.
T Consensus 94 ~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-----GMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h- 167 (737)
T KOG1524|consen 94 ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-----GMLRSTVVQNEESIRCARWAPNSNSIVFCQGGH- 167 (737)
T ss_pred chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-----chHHHHHhhcCceeEEEEECCCCCceEEecCCe-
Confidence 34556678999999999999999999999999999999864 333444555678999999999999998887765
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ceeEEEEEEcCCCCEEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GVRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~v~~l~~s~~g~~l~~ 448 (604)
+.+=.+.-...+.+.. .|.+-|.++.|++.++.+++|+.|-..++||-.|..+..-. .++|++++|.|+ +.++.
T Consensus 168 --~~IKpL~~n~k~i~Wk-AHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v 243 (737)
T KOG1524|consen 168 --ISIKPLAANSKIIRWR-AHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLL 243 (737)
T ss_pred --EEEeecccccceeEEe-ccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccc-cceee
Confidence 5555555555455554 68899999999999999999999999999999888776543 458999999999 55555
Q ss_pred EeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
++. ++.++ .....+.|..++|++||..+++|+..|.+.+
T Consensus 244 ~S~-nt~R~----------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 244 WSY-NTARF----------SSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eee-eeeee----------cCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 443 23331 1123477999999999999999999998654
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.6e-15 Score=133.17 Aligned_cols=241 Identities=16% Similarity=0.254 Sum_probs=167.2
Q ss_pred cCCCcEEEEEEcCCCC-----eEEEEECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCC-CCeEEEEeC
Q psy10566 299 DHCDEVWFCKFSPDGL-----KLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPD-SSHLLVVGP 367 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~-----~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd-~~~l~s~~~ 367 (604)
.|.-+++.+.|.|+.. +|||++ ..+++|.+..++....+...+. .+..++++..|+.- -+++.+++-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 5888999999999863 677764 4799999985444443333333 35678999999874 456777777
Q ss_pred CCceEEEEEECCCceE--EEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCC
Q psy10566 368 EDCHELWVWNIETELL--RVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGK 444 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~ 444 (604)
|- +..+||++++.. +.+....|...|..++|...+ ..|++.+.||.+++||++
T Consensus 172 DT--TCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR---------------------- 227 (364)
T KOG0290|consen 172 DT--TCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR---------------------- 227 (364)
T ss_pred cC--eEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec----------------------
Confidence 87 899999999732 333334788999999998754 355666666666666653
Q ss_pred EEEEEeCCCeEEEEEcCCCccccccc----CCCCeeEEEECCCC-CEEEEEec-CCeEEEEecCC-CceeeEeeccccce
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQ----EDHPVMSFTIDATD-RLALLNVS-TQGVHLWDLRD-RILLRKFQGVTQGQ 517 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~----~~~~i~~~~~s~~~-~~l~~~~~-dg~I~lwd~~~-~~~~~~~~~~~~~~ 517 (604)
..+-..++- ...+...++|++.. +++++-.. ...|.+.|++. ..++..+.+|...+
T Consensus 228 -----------------~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~V 290 (364)
T KOG0290|consen 228 -----------------SLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASV 290 (364)
T ss_pred -----------------ccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccc
Confidence 322222111 13566778887755 45555444 45699999986 56788999999987
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc------ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKREL------PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~------~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
..|... +.....|+++++|..+.|||+...- ++..+. -.+.|+.+.|+|..+..++.|... ++.|
T Consensus 291 NgIaWa--PhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~k-klei 361 (364)
T KOG0290|consen 291 NGIAWA--PHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFGK-KLEI 361 (364)
T ss_pred cceEec--CCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEecC-eeeE
Confidence 777544 4456799999999999999997521 222333 457899999998767888887643 3433
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=142.47 Aligned_cols=275 Identities=15% Similarity=0.187 Sum_probs=177.2
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEE-----CCCCCeEEEEeCCCceEEEEEE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW-----SPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-----spd~~~l~s~~~d~~~~i~vwd 377 (604)
.+....++-.|++|+.. ....+.+|+..........+....-......|=+| .|++--++.+-.-+ .|.+.|
T Consensus 125 ~~~~~~~~~~gd~lcFn-vg~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tG--qvq~id 201 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFN-VGRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTG--QVQLID 201 (636)
T ss_pred ceeeccccCCCCEEEEe-cCCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccC--ceEEec
Confidence 45555666667777654 34568888876322122222111111122333344 35565666666665 688777
Q ss_pred CCCceEEEEec---CCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 378 IETELLRVKLN---HSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 378 ~~~~~~~~~~~---~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
....+....+. .-....|+++.|-| +...|+++-.+|.+++||..-.. +..-.+....+++..+......+
T Consensus 202 p~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~-----~~t~p~~~~~k~~~~f~i~t~ks 276 (636)
T KOG2394|consen 202 PINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVC-----GATAPSYQALKDGDQFAILTSKS 276 (636)
T ss_pred chhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccc-----cCCCCcccccCCCCeeEEeeeec
Confidence 65532222111 12346799999999 45677788889999999872110 00011111223333333221111
Q ss_pred eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEE
Q psy10566 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVA 533 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 533 (604)
.. ..............|..++|+|||++|++.+.||.++|||..+.+++..++..-+ .+.|+.|+|||+||+
T Consensus 277 k~-----~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFG---GLLCvcWSPDGKyIv 348 (636)
T KOG2394|consen 277 KK-----TRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFG---GLLCVCWSPDGKYIV 348 (636)
T ss_pred cc-----cCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhcc---ceEEEEEcCCccEEE
Confidence 00 0011111112345899999999999999999999999999999887766665544 345567789999999
Q ss_pred EEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC-------------------------------------------
Q psy10566 534 SGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV------------------------------------------- 570 (604)
Q Consensus 534 sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~------------------------------------------- 570 (604)
+|++|.-|.||.+...+.+..-.+|...|+.|+|.|-
T Consensus 349 tGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~ 428 (636)
T KOG2394|consen 349 TGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFN 428 (636)
T ss_pred ecCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccc
Confidence 9999999999999999999999999999999999831
Q ss_pred ----CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 ----YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ----~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
-...|.|.+.|..+.+||+....
T Consensus 429 ~~~~v~YRfGSVGqDTqlcLWDlteD~ 455 (636)
T KOG2394|consen 429 RINSVTYRFGSVGQDTQLCLWDLTEDV 455 (636)
T ss_pred cccceEEEeecccccceEEEEecchhh
Confidence 02468899999999999997643
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.4e-14 Score=149.97 Aligned_cols=256 Identities=17% Similarity=0.196 Sum_probs=186.8
Q ss_pred eeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCc-------eEEEEecCCCCCCeEEEEEecCCCEE
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETE-------LLRVKLNHSPEDSLTSCSWNRDGTKF 407 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l 407 (604)
++..+..+..|...|..++.++.. .++++||.|| +|++||...- +...++. .....+.++...+.+..+
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DG--tVKvW~~~k~~~~~~s~rS~ltys-~~~sr~~~vt~~~~~~~~ 1113 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDG--TVKVWNLRKLEGEGGSARSELTYS-PEGSRVEKVTMCGNGDQF 1113 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCc--eEEEeeehhhhcCcceeeeeEEEe-ccCCceEEEEeccCCCeE
Confidence 466788888899999999887766 8999999998 9999998541 1222222 245789999999999999
Q ss_pred EEEecCCeEEEEEcCCCeee--------ee----eceeEEEEEEcCC-CC-EEEEEeCCCeEEEEEcCCCcccccccC--
Q psy10566 408 VCGGIRGQFYQCDIEGQVLD--------SW----EGVRVNCLWCRSD-GK-SVLAADTHHRIRTYNFEHLTDSNLLQE-- 471 (604)
Q Consensus 408 ~s~~~dg~i~iwd~~~~~~~--------~~----~~~~v~~l~~s~~-g~-~l~~~~~dg~I~i~d~~~~~~~~~~~~-- 471 (604)
|+++.||.|.+.+++-.... .. .+.-+..-++... +. .++.+...+.|..||.+........+.
T Consensus 1114 Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~ 1193 (1431)
T KOG1240|consen 1114 AVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL 1193 (1431)
T ss_pred EEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCc
Confidence 99999999999998531111 00 1112333344332 33 688888889999999998766655543
Q ss_pred -CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec-cccceEEEEeeeCCCCCcEEEEEeC--CCcEEEEeCC
Q psy10566 472 -DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSE--DGKVYIWHVK 547 (604)
Q Consensus 472 -~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~--dg~I~iwd~~ 547 (604)
.+.|++++.+|.+..+++|+..|.+.+||++-+.++..+.. +......+.++...+.....++++. .+.|.+|++.
T Consensus 1194 ~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~ 1273 (1431)
T KOG1240|consen 1194 RHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNME 1273 (1431)
T ss_pred cccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecc
Confidence 67899999999999999999999999999999988877763 3344555666666666666666654 7889999999
Q ss_pred CCcceEEeeCCC-------------------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 548 RELPIATLSGHT-------------------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 548 ~~~~~~~l~~h~-------------------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
+|.+-.++.... -.....++.. ++.++.+|+.|..||.||.......
T Consensus 1274 ~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~-~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1274 TGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCE-KNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred cCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeeccc-CCceeeecCCccceeeccCCCcccc
Confidence 987766664321 0111222322 3678999999999999999876543
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=3e-14 Score=147.54 Aligned_cols=244 Identities=16% Similarity=0.187 Sum_probs=174.2
Q ss_pred CCCcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCCCce--eEeeEEeccCCCCeeEEEECCCCCe--EEEEeCCCceEEE
Q psy10566 300 HCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVTFT--CQHRKTLEGHTLGVAYLAWSPDSSH--LLVVGPEDCHELW 374 (604)
Q Consensus 300 H~~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~~~~--~~~~~~l~~h~~~V~~l~~spd~~~--l~s~~~d~~~~i~ 374 (604)
-...|+|++|+|. ..++|.|+.+|.|.+||+...... .........|..+++.+.|..+-.. +++++.|| .|.
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG--~i~ 318 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDG--SIC 318 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCC--cEe
Confidence 4578999999995 558888999999999999843321 1112223358899999999765544 99999998 899
Q ss_pred EEECCCceEEEEe-----------cCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCC---Ce------eeee--ec
Q psy10566 375 VWNIETELLRVKL-----------NHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEG---QV------LDSW--EG 431 (604)
Q Consensus 375 vwd~~~~~~~~~~-----------~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~---~~------~~~~--~~ 431 (604)
.|+++.-...... .......+++++|.+ +-..|++|+.+|.|..-+-.| .. ...+ +.
T Consensus 319 ~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~ 398 (555)
T KOG1587|consen 319 SWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHI 398 (555)
T ss_pred eeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccC
Confidence 9987653321100 012234588999998 667899999999998754422 11 1111 22
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCcccccc-cCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCCC--ce
Q psy10566 432 VRVNCLWCRSDGKSVLAADTHHRIRTYNFE-HLTDSNLL-QEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRDR--IL 506 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~-~~~~~~~~-~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~--~~ 506 (604)
.+|.++.++|-+..++..+.|-++++|... ........ .....+++++|||... .++++..+|.+.+||+... .+
T Consensus 399 g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~P 478 (555)
T KOG1587|consen 399 GPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEP 478 (555)
T ss_pred cceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCC
Confidence 379999999988777777779999999987 33333333 3455699999999874 5666777999999999753 34
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+.+..-. .......++++.|++|++|...|++++|++..
T Consensus 479 v~s~~~~---~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 479 VLSQKVC---SPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred ccccccc---ccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 4444333 22455577788899999999999999999963
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.3e-15 Score=137.88 Aligned_cols=201 Identities=12% Similarity=0.178 Sum_probs=159.7
Q ss_pred CCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC--------CCeeeeeece--eEEEEEEcCC-CCEEEEEeCCCeEE
Q psy10566 389 HSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE--------GQVLDSWEGV--RVNCLWCRSD-GKSVLAADTHHRIR 456 (604)
Q Consensus 389 ~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~--------~~~~~~~~~~--~v~~l~~s~~-g~~l~~~~~dg~I~ 456 (604)
.+|.++|..++|+| +...+++|+.|.+|.+|.+- .+.+..+.+| +|..++|+|. .+.|++++.|.+|.
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~ 157 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS 157 (472)
T ss_pred cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence 47899999999999 66789999999999999982 1345566676 7899999996 56788999999999
Q ss_pred EEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe
Q psy10566 457 TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 457 i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs 536 (604)
+||+.+++....+.|...|.++.|+.+|.++++.+.|..|+|||.++++.+..-.+|.+.. ..+.+|. .+|.++-+|-
T Consensus 158 iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k-~~Raifl-~~g~i~tTGf 235 (472)
T KOG0303|consen 158 IWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAK-PARAIFL-ASGKIFTTGF 235 (472)
T ss_pred EEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCC-cceeEEe-ccCceeeecc
Confidence 9999999988888899999999999999999999999999999999999998877776543 3344554 5677555553
Q ss_pred ---CCCcEEEEeCCCCc---ceEEeeCCCCCeeEEEEcCCCCcEE-EEEeCCCcEEEECCCCCC
Q psy10566 537 ---EDGKVYIWHVKREL---PIATLSGHTRTVSCVAWNPVYHQMI-ASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 537 ---~dg~I~iwd~~~~~---~~~~l~~h~~~V~~v~~sp~~~~~l-~s~s~Dg~I~iW~~~~~~ 593 (604)
.+..+-+||..+-+ ...++.. .+.|.---|.|+ ..++ +.|-.|+.||.|.+....
T Consensus 236 sr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~d-t~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 236 SRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPD-TSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred ccccccceeccCcccccCcceeEEecc-CCceEEeeecCC-CCEEEEEecCCcceEEEEecCCC
Confidence 36789999977532 2334443 345666678898 5554 455569999999987654
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-13 Score=138.26 Aligned_cols=294 Identities=18% Similarity=0.170 Sum_probs=187.8
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+.+..+......-..+.|+|||+++.+++.||.|.++|+. +.+.+.++.... ...++++|+||++++++....
T Consensus 26 ~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~----~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~- 99 (369)
T PF02239_consen 26 NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLA----TGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEP- 99 (369)
T ss_dssp -SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETT----SSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEET-
T ss_pred CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECC----cccEEEEEecCC-CcceEEEcCCCCEEEEEecCC-
Confidence 45666776554444557899999999999999999999998 555667776443 467899999999999887654
Q ss_pred eEEEEEECCCceEEEEecCC------CCCCeEEEEEecCCCEEEEEecC-CeEEEEEcCC-Cee--eeee-ceeEEEEEE
Q psy10566 371 HELWVWNIETELLRVKLNHS------PEDSLTSCSWNRDGTKFVCGGIR-GQFYQCDIEG-QVL--DSWE-GVRVNCLWC 439 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~-~~~--~~~~-~~~v~~l~~ 439 (604)
+.+.++|.++.+.+..+... ....+..+..+|....++..-.| +.|.+.|... +.+ .... +.......+
T Consensus 100 ~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~ 179 (369)
T PF02239_consen 100 GTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGF 179 (369)
T ss_dssp TEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE
T ss_pred CceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccccccccccc
Confidence 38999999999888776532 23467788888888866666554 8888888743 222 2222 235678899
Q ss_pred cCCCCEEEEE-eCCCeEEEEEcCCCccccccc-----CCCCeeEEE-------E--CCCCCEEEEEecCCeEEEEecCCC
Q psy10566 440 RSDGKSVLAA-DTHHRIRTYNFEHLTDSNLLQ-----EDHPVMSFT-------I--DATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 440 s~~g~~l~~~-~~dg~I~i~d~~~~~~~~~~~-----~~~~i~~~~-------~--s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
+|++++++++ ..+..|-++|..+.+....+. +..+...+- | ...+...++.-..+.+.+||..+.
T Consensus 180 dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~w 259 (369)
T PF02239_consen 180 DPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAW 259 (369)
T ss_dssp -TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBT
T ss_pred CcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcC
Confidence 9999987665 556789999998876554432 222222221 1 122333333334445678999999
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEE----eCCCcEEEEeCCCCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEe
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASG----SEDGKVYIWHVKRELPIATLSGH-TRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg----s~dg~I~iwd~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s 579 (604)
+.++++.....+ ..+ ..+|+++++++. ...++|.++|.++.+.+.++... ...+..+.|+++|....+|.-
T Consensus 260 kvv~~I~~~G~g-lFi---~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~ 335 (369)
T PF02239_consen 260 KVVKTIPTQGGG-LFI---KTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVW 335 (369)
T ss_dssp SEEEEEE-SSSS---E---E--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE
T ss_pred eEEEEEECCCCc-cee---ecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEe
Confidence 999999876655 333 336999999988 44589999999999887777533 235899999999666666666
Q ss_pred CCC-cEEEECCCCCCC
Q psy10566 580 DDC-TVRIWGPHLNTN 594 (604)
Q Consensus 580 ~Dg-~I~iW~~~~~~~ 594 (604)
+++ .|.|||..+.+.
T Consensus 336 ~~~~~i~v~D~~Tl~~ 351 (369)
T PF02239_consen 336 DGNGAIVVYDAKTLKE 351 (369)
T ss_dssp --TTEEEEEETTTTEE
T ss_pred cCCCEEEEEECCCcEE
Confidence 555 899999988763
|
... |
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.7e-14 Score=125.54 Aligned_cols=231 Identities=15% Similarity=0.194 Sum_probs=173.1
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCC---------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIET---------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
.|.+-+|+|.+++|+++..+| .|.+..+.+ ++........|.++++.++|. ..++++|+ ||.|+-|
T Consensus 12 tvf~qa~sp~~~~l~agn~~G--~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw 86 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFG--DIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGW 86 (325)
T ss_pred HHHHHhhCCcceEEEEecCCC--eEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEe
Confidence 466778999999999999998 799888754 233333335899999999998 34566655 5999988
Q ss_pred EcCC----Ceee------------eeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECC
Q psy10566 420 DIEG----QVLD------------SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDA 482 (604)
Q Consensus 420 d~~~----~~~~------------~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~ 482 (604)
..+. ...+ ...-..|+++...|..+.++.++.|+.++-||+++++....+ .|...+.++..-.
T Consensus 87 ~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~ 166 (325)
T KOG0649|consen 87 EWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRN 166 (325)
T ss_pred eehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecc
Confidence 7621 1110 011125899999999888888889999999999999877655 4788899998866
Q ss_pred CCCEEEEEecCCeEEEEecCCCceeeEeeccccc-------eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 483 TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG-------QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 483 ~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
....+++|+.||++++||.++++.+..+...... ...|.++. -+..++++|+ ...+.+|++++.++..++
T Consensus 167 ~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala--~~edWlvCGg-Gp~lslwhLrsse~t~vf 243 (325)
T KOG0649|consen 167 ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALA--VNEDWLVCGG-GPKLSLWHLRSSESTCVF 243 (325)
T ss_pred cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEe--ccCceEEecC-CCceeEEeccCCCceEEE
Confidence 6678999999999999999999998887644332 12333343 4567888875 456899999999988887
Q ss_pred eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 556 SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 556 ~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
. -..+|..+.|-.+ .+++++..+.|.-|.+..
T Consensus 244 p-ipa~v~~v~F~~d---~vl~~G~g~~v~~~~l~G 275 (325)
T KOG0649|consen 244 P-IPARVHLVDFVDD---CVLIGGEGNHVQSYTLNG 275 (325)
T ss_pred e-cccceeEeeeecc---eEEEeccccceeeeeecc
Confidence 6 3466788888744 677777777788887754
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-14 Score=130.04 Aligned_cols=215 Identities=17% Similarity=0.232 Sum_probs=156.6
Q ss_pred EEEEEECC--CceEEEEecCCCCCCeEEEEEec-CCCEEEEEecC-------CeEEEEEcCCC----------eeeeeec
Q psy10566 372 ELWVWNIE--TELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIR-------GQFYQCDIEGQ----------VLDSWEG 431 (604)
Q Consensus 372 ~i~vwd~~--~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d-------g~i~iwd~~~~----------~~~~~~~ 431 (604)
.|.+.+++ .+....+....+.+.|..++-+| +.+.|+++..+ ..+.+|.+... .+..+..
T Consensus 41 qVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldt 120 (370)
T KOG1007|consen 41 QVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDT 120 (370)
T ss_pred eeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCH
Confidence 55555544 44455555556778899999999 44555555442 24679988311 1122221
Q ss_pred ---eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-cc------ccCCCCeeEEEECC--CCCEEEEEecCCeEEEE
Q psy10566 432 ---VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-NL------LQEDHPVMSFTIDA--TDRLALLNVSTQGVHLW 499 (604)
Q Consensus 432 ---~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~------~~~~~~i~~~~~s~--~~~~l~~~~~dg~I~lw 499 (604)
.++.|+.|.|++..+++-. +..|.+|++...... .. ..+....++-+|+| +++.+ ....|+++..|
T Consensus 121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv-~tt~d~tl~~~ 198 (370)
T KOG1007|consen 121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQV-ATTSDSTLQFW 198 (370)
T ss_pred HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceE-EEeCCCcEEEE
Confidence 2799999999999888876 889999999876542 11 12355678888998 45544 45578999999
Q ss_pred ecCCCceeeEeec-cccceEEEEeeeCCCCC-cEEEEEeCCCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCCCCcEEE
Q psy10566 500 DLRDRILLRKFQG-VTQGQFTIHSCFGGANQ-DFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 500 d~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
|+++......+.. |.+ .++.+.+.|+. .+|++|++||.|+|||.+. ..++.++.+|...|++|.|+|....++.
T Consensus 199 D~RT~~~~~sI~dAHgq---~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiL 275 (370)
T KOG1007|consen 199 DLRTMKKNNSIEDAHGQ---RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLIL 275 (370)
T ss_pred Eccchhhhcchhhhhcc---eeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEE
Confidence 9998877666653 333 44555555664 5788999999999999984 6789999999999999999999889999
Q ss_pred EEeCCCcEEEECCCC
Q psy10566 577 SVSDDCTVRIWGPHL 591 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~ 591 (604)
|+|.|..|.+|-...
T Consensus 276 s~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 276 SGGSDSAVNLSCASS 290 (370)
T ss_pred ecCCCceeEEEeccc
Confidence 999999999997654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=135.73 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=185.5
Q ss_pred eEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecC
Q psy10566 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 340 ~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
.+.+.+|.+.|.++.|+.++++|++||.|. .+++|+++. .+.+......|.+.|.|++|.....++++|+.+
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~--~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~ 126 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDM--HGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW 126 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcc--eeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc
Confidence 455678999999999999999999999887 899999853 456666677788999999999999999999999
Q ss_pred CeEEEEEcCC-Ceeeeeece----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc-cc---cccCCCCeeEEEECCCC
Q psy10566 414 GQFYQCDIEG-QVLDSWEGV----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD-SN---LLQEDHPVMSFTIDATD 484 (604)
Q Consensus 414 g~i~iwd~~~-~~~~~~~~~----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~-~~---~~~~~~~i~~~~~s~~~ 484 (604)
++|...|++. +.+..+... .|..+..+|..+.+++.+.++.|.+||.+.... .. .........++.|+|..
T Consensus 127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~ 206 (609)
T KOG4227|consen 127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET 206 (609)
T ss_pred ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCC
Confidence 9999999964 444444322 589999999999999999999999999987652 22 12235667788899865
Q ss_pred -CEEEEEecCCeEEEEecCCCc-eeeEeecc---ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc-eEEeeCC
Q psy10566 485 -RLALLNVSTQGVHLWDLRDRI-LLRKFQGV---TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP-IATLSGH 558 (604)
Q Consensus 485 -~~l~~~~~dg~I~lwd~~~~~-~~~~~~~~---~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~-~~~l~~h 558 (604)
.+|++++..+.+-+||++... ++..+.+. .+.........|+|+|+.+.+--....-.+||+-+..+ +..+ .|
T Consensus 207 P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~-D~ 285 (609)
T KOG4227|consen 207 PALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKS-DH 285 (609)
T ss_pred ceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEec-cC
Confidence 567788888899999998743 33333222 22111112344568888888776665666788877443 2233 23
Q ss_pred C-------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 559 T-------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 559 ~-------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
. ..+.+++|.-+ .-++||+++-.|++|.+....
T Consensus 286 N~~GY~N~~T~KS~~F~~D--~~v~tGSD~~~i~~WklP~~~ 325 (609)
T KOG4227|consen 286 NPNGYCNIKTIKSMTFIDD--YTVATGSDHWGIHIWKLPRAN 325 (609)
T ss_pred CCCcceeeeeeeeeeeecc--eeeeccCcccceEEEecCCCc
Confidence 2 25677888865 559999999999999986543
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-13 Score=128.32 Aligned_cols=235 Identities=11% Similarity=0.149 Sum_probs=171.0
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC--CeEEEEEcC-C
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR--GQFYQCDIE-G 423 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~-~ 423 (604)
...+..+.|..+...|..|+.+| .++|..+.-....... .....|.-+-|+. ..++..+.+ ..++++++. +
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G---yk~~~~~~~~k~~~~~-~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~ 78 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG---YKIFSCSPFEKCFSKD-TEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKK 78 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc---eeEEecCchHHhhccc-CCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccC
Confidence 34577778999999999999998 7888776544322111 1223344555553 455555544 357888884 3
Q ss_pred Ceeeeee-ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC----CCCeeEEEECCCCCEEEEEe--cCCeE
Q psy10566 424 QVLDSWE-GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE----DHPVMSFTIDATDRLALLNV--STQGV 496 (604)
Q Consensus 424 ~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~--~dg~I 496 (604)
..+..+. ...|.++.++. +++++.-.+. |+|||+++.+....+.. ...+..+++++.+.+++.-+ ..|.|
T Consensus 79 ~~ICe~~fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV 155 (391)
T KOG2110|consen 79 TTICEIFFPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDV 155 (391)
T ss_pred ceEEEEecCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceE
Confidence 3443332 34566666654 4555555544 99999999887766553 33455666666666887644 36889
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc-EEEEeCCCCcceEEeeCCC--CCeeEEEEcCCCCc
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK-VYIWHVKRELPIATLSGHT--RTVSCVAWNPVYHQ 573 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~-I~iwd~~~~~~~~~l~~h~--~~V~~v~~sp~~~~ 573 (604)
.+||..+-+++..+..|.+ .+.+++++++|.+||++|+.|+ ||||.+.+|+.+.+|+--. ..|.+++|+|+ ..
T Consensus 156 ~l~d~~nl~~v~~I~aH~~---~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~d-s~ 231 (391)
T KOG2110|consen 156 VLFDTINLQPVNTINAHKG---PLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPD-SQ 231 (391)
T ss_pred EEEEcccceeeeEEEecCC---ceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCC-CC
Confidence 9999999999999999988 5667788999999999999997 7999999999999997543 46789999999 89
Q ss_pred EEEEEeCCCcEEEECCCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+|++.|..++|+|+.++....
T Consensus 232 ~L~~sS~TeTVHiFKL~~~~~ 252 (391)
T KOG2110|consen 232 FLAASSNTETVHIFKLEKVSN 252 (391)
T ss_pred eEEEecCCCeEEEEEeccccc
Confidence 999999999999999987653
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.7e-16 Score=157.49 Aligned_cols=244 Identities=12% Similarity=0.156 Sum_probs=197.2
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeE
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 416 (604)
.+.++.+.+|-..|+|+.|...|.++++++.|. .++||..+++.+..... +|.+.++.++.+.+...+++++.|..|
T Consensus 180 mk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~--lvKiwS~et~~~lAs~r-Ghs~ditdlavs~~n~~iaaaS~D~vI 256 (1113)
T KOG0644|consen 180 MKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDR--LVKIWSMETARCLASCR-GHSGDITDLAVSSNNTMIAAASNDKVI 256 (1113)
T ss_pred HHHHHHHHhhhhheeeeeeccccceEeecCccc--eeeeeeccchhhhccCC-CCccccchhccchhhhhhhhcccCceE
Confidence 345667789999999999999999999999987 89999999999988887 889999999999999999999999999
Q ss_pred EEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc-----cccCCCCeeEEEECCCCCEEE
Q psy10566 417 YQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN-----LLQEDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 417 ~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~ 488 (604)
++|.+ ++..+..+.+| .|++++|+|-. +.+.||++++||.+-..... .......+.++.+..++..++
T Consensus 257 rvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~ 332 (1113)
T KOG0644|consen 257 RVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFL 332 (1113)
T ss_pred EEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccc
Confidence 99999 67888878787 59999999965 77889999999998221111 122356677888888899999
Q ss_pred EEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s 568 (604)
+++.|+.-..|.+..... +......+ ...+....+.+++-.+..+.+|++.+|.....+.+|...+..+.+|
T Consensus 333 Tgs~d~ea~n~e~~~l~~------~~~~lif~--t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~H 404 (1113)
T KOG0644|consen 333 TGSRDGEARNHEFEQLAW------RSNLLIFV--TRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVH 404 (1113)
T ss_pred cccCCcccccchhhHhhh------hccceEEE--eccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeec
Confidence 999999888876643211 11111111 1111222567777788899999999999999999999999999999
Q ss_pred CCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
|-+.....+++.||...|||+-.+.+.
T Consensus 405 pfn~ri~msag~dgst~iwdi~eg~pi 431 (1113)
T KOG0644|consen 405 PFNPRIAMSAGYDGSTIIWDIWEGIPI 431 (1113)
T ss_pred CCCcHhhhhccCCCceEeeecccCCcc
Confidence 997888889999999999999877643
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-13 Score=136.19 Aligned_cols=273 Identities=16% Similarity=0.187 Sum_probs=192.4
Q ss_pred CCCcEEEEEEcCCCCe-EEEEECCCeEEEEEeCCCCceeEeeEEeccC--CCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 300 HCDEVWFCKFSPDGLK-LATGSKDTTVIIWDVDPVTFTCQHRKTLEGH--TLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 300 H~~~V~~v~fspdg~~-lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h--~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
|...-+.|..+|||+| +|||.+--.|++||+. ... ..+..| ...|.-.-.+.|-..++.-..|. +|-+.
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydla--nLS----LKFERhlDae~V~feiLsDD~SK~v~L~~DR--~IefH 121 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLA--NLS----LKFERHLDAEVVDFEILSDDYSKSVFLQNDR--TIEFH 121 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcc--cce----eeeeecccccceeEEEeccchhhheEeecCc--eeeeh
Confidence 5667788999999996 5677788899999998 222 233334 34555555666655666666665 45443
Q ss_pred ECCCceE-EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeec--eeEEEEEEcCCCCEEEEEeCC
Q psy10566 377 NIETELL-RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEG--VRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 377 d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~--~~v~~l~~s~~g~~l~~~~~d 452 (604)
. ..|.. ...+. ..-..++++.-..-|++++....|+-+++ .|..+..+.. ..++++.+++-...+++|+.+
T Consensus 122 a-k~G~hy~~RIP----~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~ 196 (703)
T KOG2321|consen 122 A-KYGRHYRTRIP----KFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTED 196 (703)
T ss_pred h-hcCeeeeeecC----cCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccC
Confidence 3 22321 12222 23456667665555777777778888888 4777776654 479999999999999999999
Q ss_pred CeEEEEEcCCCcccccccC------------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 453 HRIRTYNFEHLTDSNLLQE------------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
|.|..||.+.......+.. ...|+++.|+.+|-.+++|+.+|.|.|||+++.+++..- .|.... .|
T Consensus 197 g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-dh~~e~-pi 274 (703)
T KOG2321|consen 197 GVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-DHGYEL-PI 274 (703)
T ss_pred ceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec-ccCCcc-ce
Confidence 9999999988655443332 234999999999999999999999999999998776432 333322 23
Q ss_pred EeeeCCCC--CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 521 HSCFGGAN--QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 521 ~~~~~~~~--~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
..+.|-+. ++.+++. +...++|||-.+|++...+.. ...++.+++-|+ ..+++++-+++.+..|=+.
T Consensus 275 ~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~-sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 275 KKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPG-SGMFFTANESSKMHTYYIP 343 (703)
T ss_pred eeecccccCCCceEEec-chHHhhhcccccCCceeeccc-cCCcCceeeecC-CceEEEecCCCcceeEEcc
Confidence 32333222 3455544 567899999999999988874 445999999998 7899999998887766544
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.6e-13 Score=122.25 Aligned_cols=272 Identities=15% Similarity=0.279 Sum_probs=188.7
Q ss_pred CCcEEEEEEcCCCCeEEE-EECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 301 CDEVWFCKFSPDGLKLAT-GSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 301 ~~~V~~v~fspdg~~las-gs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
-+.|..+.|..|..+++. ...|+.|.+|++. ..+-...+.....++.+++|||||+.++..+.-. .+|.+|.+.
T Consensus 48 ldki~yieW~ads~~ilC~~yk~~~vqvwsl~----Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~-lriTVWSL~ 122 (447)
T KOG4497|consen 48 LDKIVYIEWKADSCHILCVAYKDPKVQVWSLV----QPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFD-LRITVWSLN 122 (447)
T ss_pred HHHhhheeeeccceeeeeeeeccceEEEEEee----cceeEEEeccCCCcceeeeECCCcceEeeeecce-eEEEEEEec
Confidence 467888999999886655 4688899999998 5555667777788999999999998877766654 489999998
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--------------------------eEEEEEcCCCeeeeee---
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--------------------------QFYQCDIEGQVLDSWE--- 430 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--------------------------~i~iwd~~~~~~~~~~--- 430 (604)
+.+....-. .+..+..++|+|||++.+..+... +=.-|..+|..+..|.
T Consensus 123 t~~~~~~~~--pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~L 200 (447)
T KOG4497|consen 123 TQKGYLLPH--PKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVL 200 (447)
T ss_pred cceeEEecc--cccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchh
Confidence 877654433 334568899999999888776321 0011222333333332
Q ss_pred ---------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCC---------------Cc----------------------
Q psy10566 431 ---------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEH---------------LT---------------------- 464 (604)
Q Consensus 431 ---------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~---------------~~---------------------- 464 (604)
+..+..+.++|.++.+++|+.|+.+++.+--+ .+
T Consensus 201 eykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~ 280 (447)
T KOG4497|consen 201 EYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFT 280 (447)
T ss_pred hheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccC
Confidence 23578899999999999999999988765300 00
Q ss_pred ----------cc-------------ccc-------cCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeEeec
Q psy10566 465 ----------DS-------------NLL-------QEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 465 ----------~~-------------~~~-------~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~~~~ 512 (604)
.. ... .....+.-++|++|..++++-.. -+.+.+||++..+....+..
T Consensus 281 p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQ 360 (447)
T KOG4497|consen 281 PTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQ 360 (447)
T ss_pred CCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhh
Confidence 00 000 00223556899999998887654 35699999988765444432
Q ss_pred cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
. . .|+...+.|....++.+.....+++|...-...+. ..+..-.|..+.|+-+ +..++-++.|....
T Consensus 361 k-~---piraf~WdP~~prL~vctg~srLY~W~psg~~~V~-vP~~GF~i~~l~W~~~-g~~i~l~~kDafc~ 427 (447)
T KOG4497|consen 361 K-H---PIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVG-VPKKGFNIQKLQWLQP-GEFIVLCGKDAFCV 427 (447)
T ss_pred c-c---ceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEe-cCCCCceeeeEEecCC-CcEEEEEcCCceEE
Confidence 2 1 45666677887777777777789999877543333 3344467999999998 77888888886543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-13 Score=141.92 Aligned_cols=234 Identities=16% Similarity=0.127 Sum_probs=161.1
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEEe
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 401 (604)
..|.+||.+ . .....+..+...+.+.+|+|||+.|+.++..+ ...|++||+.++....... ..+...+..|+
T Consensus 184 ~~l~i~D~~--g---~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~--~~g~~~~~~~S 256 (433)
T PRK04922 184 YALQVADSD--G---YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVAS--FRGINGAPSFS 256 (433)
T ss_pred EEEEEECCC--C---CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEecc--CCCCccCceEC
Confidence 468889875 1 22344556777899999999999999887542 2379999998887543322 23445678999
Q ss_pred cCCCEEEE-EecCC--eEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeC-CCe--EEEEEcCCCcccccccCCC
Q psy10566 402 RDGTKFVC-GGIRG--QFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADT-HHR--IRTYNFEHLTDSNLLQEDH 473 (604)
Q Consensus 402 ~~~~~l~s-~~~dg--~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~-dg~--I~i~d~~~~~~~~~~~~~~ 473 (604)
|||+.++. .+.+| .|++||+.+.....+..+ ......|+|||+.++.++. ++. |+++|+.++....+.....
T Consensus 257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~ 336 (433)
T PRK04922 257 PDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGN 336 (433)
T ss_pred CCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCC
Confidence 99998764 45555 699999965555554443 3457899999998887764 444 7777776665444433344
Q ss_pred CeeEEEECCCCCEEEEEecCC---eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC---CcEEEEeCC
Q psy10566 474 PVMSFTIDATDRLALLNVSTQ---GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED---GKVYIWHVK 547 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d---g~I~iwd~~ 547 (604)
.....+|+|+|+.++..+.++ .|.+||+.+++.. .+... .. .....++|+|++++..+.+ +.|++++..
T Consensus 337 ~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~-~~---~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~ 411 (433)
T PRK04922 337 YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPG-SL---DESPSFAPNGSMVLYATREGGRGVLAAVSTD 411 (433)
T ss_pred CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCC-CC---CCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 455789999999998876543 5999999887654 33211 11 1123557999988877663 468888885
Q ss_pred CCcceEEeeCCCCCeeEEEEcC
Q psy10566 548 RELPIATLSGHTRTVSCVAWNP 569 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V~~v~~sp 569 (604)
+.....+..+.+.+...+|+|
T Consensus 412 -g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 412 -GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred -CCceEEcccCCCCCCCCccCC
Confidence 455666766777788889987
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-12 Score=118.63 Aligned_cols=271 Identities=14% Similarity=0.186 Sum_probs=177.6
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-----ceEEEEEEC
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-----CHELWVWNI 378 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-----~~~i~vwd~ 378 (604)
..+++|+.|...++.|..+| .+||+.++ .+.......+..++.-+..---.++++..|..+ ...|.|||=
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P----~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD 82 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDP----FKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDD 82 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCc----hhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEec
Confidence 44599999999999887666 89999983 222122222222222111111234555444322 127999997
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece----eEEEEEEcCCCCEEEE-EeC
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV----RVNCLWCRSDGKSVLA-ADT 451 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~----~v~~l~~s~~g~~l~~-~~~ 451 (604)
....++..+. ...+|.++.+.++ .+++. ..+.|++|... -+.+..+... ...+++-..+...++. |-.
T Consensus 83 ~k~~~i~el~--f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k 157 (346)
T KOG2111|consen 83 LKERCIIELS--FNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFK 157 (346)
T ss_pred ccCcEEEEEE--eccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCc
Confidence 7777777665 5578999999865 34433 46789999884 3444444332 1222222222233333 234
Q ss_pred CCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEecCCe-EEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 452 HHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 452 dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
-|.|++-|+...+. ..+..|...|.+++++.+|..+|+++..|+ |||||..+|+.+..+...... ..+.++.++|
T Consensus 158 ~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~-A~iy~iaFSp 236 (346)
T KOG2111|consen 158 TGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDR-ADIYCIAFSP 236 (346)
T ss_pred cceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCch-heEEEEEeCC
Confidence 58999999987655 566779999999999999999999999998 899999999999988744332 2456677889
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceE------------------------EeeCCCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIA------------------------TLSGHTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~------------------------~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
+..+||++|+.|+|+||.++....-. .+.-..++..-++|-.+ .+.++..+.||+
T Consensus 237 ~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~-~nsvi~i~~Dgs 315 (346)
T KOG2111|consen 237 NSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSE-TNTVIAICADGS 315 (346)
T ss_pred CccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCC-CCeEEEEEeCCc
Confidence 99999999999999999887422111 11122345555677665 456666677787
Q ss_pred EEE
Q psy10566 584 VRI 586 (604)
Q Consensus 584 I~i 586 (604)
-+=
T Consensus 316 y~k 318 (346)
T KOG2111|consen 316 YYK 318 (346)
T ss_pred EEE
Confidence 543
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.6e-13 Score=139.39 Aligned_cols=235 Identities=18% Similarity=0.149 Sum_probs=156.7
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEEe
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 401 (604)
..|.+||.+ +.....+..+...+.+.+|+|||+.|+.++.++ ...|++||+.+++...... ..+.+.+.+|+
T Consensus 176 ~~L~~~D~d-----G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~--~~g~~~~~~~S 248 (427)
T PRK02889 176 YQLQISDAD-----GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVAN--FKGSNSAPAWS 248 (427)
T ss_pred cEEEEECCC-----CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeec--CCCCccceEEC
Confidence 356666654 122334456778899999999999998877532 2379999999887644322 23456789999
Q ss_pred cCCCEEEE-EecCCeEEEE--EcCCCeeeeeece--eEEEEEEcCCCCEEEEEeC-CCeEEEEEc--CCCcccccccCCC
Q psy10566 402 RDGTKFVC-GGIRGQFYQC--DIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADT-HHRIRTYNF--EHLTDSNLLQEDH 473 (604)
Q Consensus 402 ~~~~~l~s-~~~dg~i~iw--d~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~-dg~I~i~d~--~~~~~~~~~~~~~ 473 (604)
|||+.++. .+.+|...+| |+.+.....+..+ ......|+|||+.++..+. ++...+|.+ .+.....+.....
T Consensus 249 PDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~ 328 (427)
T PRK02889 249 PDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGS 328 (427)
T ss_pred CCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCC
Confidence 99998874 5667765555 5555445444433 3456789999998887654 455555544 4443333332333
Q ss_pred CeeEEEECCCCCEEEEEecCC---eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC---cEEEEeCC
Q psy10566 474 PVMSFTIDATDRLALLNVSTQ---GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG---KVYIWHVK 547 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg---~I~iwd~~ 547 (604)
......|+|+|++++..+.++ .|.+||+.+++....... . . .....++|+|++|+.++.++ .+++.+.
T Consensus 329 ~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~-~-~---~~~p~~spdg~~l~~~~~~~g~~~l~~~~~- 402 (427)
T PRK02889 329 YNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDT-T-R---DESPSFAPNGRYILYATQQGGRSVLAAVSS- 402 (427)
T ss_pred CcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCC-C-C---ccCceECCCCCEEEEEEecCCCEEEEEEEC-
Confidence 345678999999998877654 599999988765433222 1 1 12345679999988887654 3666666
Q ss_pred CCcceEEeeCCCCCeeEEEEcCC
Q psy10566 548 RELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
++.....+..+.+.+...+|+|-
T Consensus 403 ~g~~~~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 403 DGRIKQRLSVQGGDVREPSWGPF 425 (427)
T ss_pred CCCceEEeecCCCCCCCCccCCC
Confidence 46667777777788888999984
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.7e-15 Score=143.35 Aligned_cols=231 Identities=17% Similarity=0.195 Sum_probs=195.2
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL 426 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 426 (604)
..+.+.+.++.+|++++.++..| .+-.+|..++.+...+. -...|.++.|..+..+|+++ ....+++||-.|..+
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKG--HlAa~Dw~t~~L~~Ei~--v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~GtEl 203 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKG--HLAAFDWVTKKLHFEIN--VMETVRDVTFLHNEQFFAVA-QKKYVYVYDNNGTEL 203 (545)
T ss_pred ccCCeeeeecCCccEEEecCCcc--ceeeeecccceeeeeee--hhhhhhhhhhhcchHHHHhh-hhceEEEecCCCcEE
Confidence 44567899999999999999998 89999999999888876 34668999999887777665 567899999999988
Q ss_pred eeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 427 DSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 427 ~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
..+..+ +|..+.|-|..-.|++++..|.++.-|+.+++....+. ..+.+..++-+|-+..+-+|..+|+|.+|.....
T Consensus 204 HClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk 283 (545)
T KOG1272|consen 204 HCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK 283 (545)
T ss_pred eehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCc
Confidence 888766 79999999999999999999999999999998776655 4678889999999999999999999999999999
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
+++.++.+|.+.+.. +++.++|+|+||.+.|..++|||++....+.++.. ..+...+++|.. .+| .+|....|
T Consensus 284 ePLvKiLcH~g~V~s---iAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqk--glL-A~~~G~~v 356 (545)
T KOG1272|consen 284 EPLVKILCHRGPVSS---IAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQK--GLL-ALSYGDHV 356 (545)
T ss_pred chHHHHHhcCCCcce---EEECCCCcEEeecccccceeEeeeccccccceeec-CCCccccccccc--cce-eeecCCee
Confidence 999999999985544 55679999999999999999999998776666654 456788899965 334 44555679
Q ss_pred EEECC
Q psy10566 585 RIWGP 589 (604)
Q Consensus 585 ~iW~~ 589 (604)
.||.=
T Consensus 357 ~iw~d 361 (545)
T KOG1272|consen 357 QIWKD 361 (545)
T ss_pred eeehh
Confidence 99954
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.7e-13 Score=138.58 Aligned_cols=212 Identities=18% Similarity=0.218 Sum_probs=146.5
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEEC---CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe-CCCc
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSK---DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG-PEDC 370 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~---dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~-~d~~ 370 (604)
+.+..+...+.+.+|||||+.||..+. +..|.+|++. ++....+..+.++ +..++|+|||+.|+... .++.
T Consensus 192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~--~G~~~~l~~~~~~---~~~~~~SPDG~~La~~~~~~g~ 266 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA--NGAVRQVASFPRH---NGAPAFSPDGSKLAFALSKTGS 266 (429)
T ss_pred EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECC--CCCeEEccCCCCC---cCCeEECCCCCEEEEEEcCCCC
Confidence 445557778999999999999887653 3578999987 3333444444443 45689999999888653 3443
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C--eEEEEEcCCCeeeee--eceeEEEEEEcCCCCE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G--QFYQCDIEGQVLDSW--EGVRVNCLWCRSDGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~--~~~~v~~l~~s~~g~~ 445 (604)
..|++||+.++....... +...+....|+|||+.|+..+.+ + .|+.+|+++.....+ .+.......|+|||+.
T Consensus 267 ~~I~~~d~~tg~~~~lt~--~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~ 344 (429)
T PRK03629 267 LNLYVMDLASGQIRQVTD--GRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKF 344 (429)
T ss_pred cEEEEEECCCCCEEEccC--CCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCE
Confidence 479999999887654433 23457889999999998877764 3 455557755433333 2334567889999999
Q ss_pred EEEEeCC---CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCe---EEEEecCCCceeeEeecccc
Q psy10566 446 VLAADTH---HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG---VHLWDLRDRILLRKFQGVTQ 515 (604)
Q Consensus 446 l~~~~~d---g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~---I~lwd~~~~~~~~~~~~~~~ 515 (604)
++..+.+ ..|.+||+.++....+.. ........|+|||+.++.++.++. +.++++ ++...+.+.++..
T Consensus 345 Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~ 418 (429)
T PRK03629 345 MVMVSSNGGQQHIAKQDLATGGVQVLTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDG 418 (429)
T ss_pred EEEEEccCCCceEEEEECCCCCeEEeCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCC
Confidence 8877654 358889998776443332 233456789999999999988764 667776 4545555655444
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=145.00 Aligned_cols=245 Identities=16% Similarity=0.194 Sum_probs=178.8
Q ss_pred CcEEEEEEcC--CCCeEEEEECCCeEEEEEeCCCC-ceeEeeEEecc---C----CCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 302 DEVWFCKFSP--DGLKLATGSKDTTVIIWDVDPVT-FTCQHRKTLEG---H----TLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 302 ~~V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~-~~~~~~~~l~~---h----~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
..|+.+.+-. |..++.+|+.||.|+||+--... .+.+.+..+.+ + .+.=.-+.|.....+|+++|.-.
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r-- 1187 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVR-- 1187 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCee--
Confidence 4688888866 34589999999999999754222 33344433332 1 11113467888777888877654
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC----CCeeeeeece----eEEEEEEcCC
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE----GQVLDSWEGV----RVNCLWCRSD 442 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~----~v~~l~~s~~ 442 (604)
.|++||.....+...+..+....|+++.-+. .|+.+++|..||.|++||.+ ...+..+..| +|..+.+.+.
T Consensus 1188 ~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~ 1267 (1387)
T KOG1517|consen 1188 SIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQ 1267 (1387)
T ss_pred EEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecC
Confidence 8999999999988888877777788876554 56999999999999999984 2345555554 4888889887
Q ss_pred CCE-EEEEeCCCeEEEEEcCCCccccccc---C---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc--
Q psy10566 443 GKS-VLAADTHHRIRTYNFEHLTDSNLLQ---E---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV-- 513 (604)
Q Consensus 443 g~~-l~~~~~dg~I~i~d~~~~~~~~~~~---~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~-- 513 (604)
|-. +++|+.+|.|++||++......... + ++..+++.+++....+++|+. +.|+||++... .+..+..+
T Consensus 1268 G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~-~l~~~k~n~~ 1345 (1387)
T KOG1517|consen 1268 GLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGE-QLNIIKYNPG 1345 (1387)
T ss_pred CCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChh-hhcccccCcc
Confidence 655 9999999999999999853332222 1 335999999999999999998 99999998653 22222211
Q ss_pred --ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 514 --TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 514 --~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
.+....+.++.++|..-++|+|+.|.+|.||......
T Consensus 1346 F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1346 FMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred cccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 1223345667788999999999999999999876543
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.8e-14 Score=136.43 Aligned_cols=234 Identities=15% Similarity=0.176 Sum_probs=171.9
Q ss_pred cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-------CCCEEEEEecCCeEE
Q psy10566 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-------DGTKFVCGGIRGQFY 417 (604)
Q Consensus 345 ~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~l~s~~~dg~i~ 417 (604)
.|...|.|+.|+.+...+.+++.+. .+.-||+.+.... ........-.+.+..-+ ....|+.++.||.+.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~--~~~~~~~~~~s~~-~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~ 88 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQ--IFKWSDVSRDSVE-VAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFV 88 (737)
T ss_pred ccceeEEeecccccceEEEeccCce--EEEeecccchhhh-hhhCCcccCCccccccccccCCCCCcceEEEEcCCceEE
Confidence 4666778999998887666655443 4555555443321 11111111112222111 235789999999999
Q ss_pred EEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCe
Q psy10566 418 QCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG 495 (604)
Q Consensus 418 iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 495 (604)
+.+-.++..+....| .+.+-.|+|||.-+++++.||.|++|.-...-.....+...+|.|++|.|+++.++.+. .+.
T Consensus 89 il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~-g~h 167 (737)
T KOG1524|consen 89 ILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQ-GGH 167 (737)
T ss_pred EecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEec-CCe
Confidence 999888888777776 58888999999999999999999999987766666777889999999999998877664 455
Q ss_pred EEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 496 VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 496 I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
+.+=.+.....+-....|.+ .+-++.|++..+++++|++|-..+|||.. |..+..-..|+.+|++++|+|+ ..+
T Consensus 168 ~~IKpL~~n~k~i~WkAHDG---iiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd--~~~ 241 (737)
T KOG1524|consen 168 ISIKPLAANSKIIRWRAHDG---LVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE--KDY 241 (737)
T ss_pred EEEeecccccceeEEeccCc---EEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc--cce
Confidence 77777777777777888887 56667888999999999999999999965 7777777889999999999997 445
Q ss_pred EEEeCCCcEEEECC
Q psy10566 576 ASVSDDCTVRIWGP 589 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~ 589 (604)
+.+|. .+.|+=.+
T Consensus 242 ~v~S~-nt~R~~~p 254 (737)
T KOG1524|consen 242 LLWSY-NTARFSSP 254 (737)
T ss_pred eeeee-eeeeecCC
Confidence 55553 34444333
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.8e-14 Score=138.25 Aligned_cols=214 Identities=18% Similarity=0.203 Sum_probs=162.6
Q ss_pred eEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEE
Q psy10566 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFY 417 (604)
Q Consensus 340 ~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~ 417 (604)
...+.||++.|+|+.|+.+|.+|++|+.|- .+.|||.-..+.+..+..+|...|.++.|-| +...+++|..|..|+
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~--r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDT--RLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcc--eEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 467899999999999999999999999887 8999999999999999999999999999999 567899999999999
Q ss_pred EEEcCC-----------Ceeeeeece--eEEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCccccc-----------ccCC
Q psy10566 418 QCDIEG-----------QVLDSWEGV--RVNCLWCRSDG-KSVLAADTHHRIRTYNFEHLTDSNL-----------LQED 472 (604)
Q Consensus 418 iwd~~~-----------~~~~~~~~~--~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~~-----------~~~~ 472 (604)
+||++. .....|..| +|..++..|++ +.+.+++.||+|+-||++......- ...-
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l 200 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL 200 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence 999952 122333333 78889999988 7899999999999999987422111 1112
Q ss_pred CCeeEEEECCCC-CEEEEEecCCeEEEEecCCC------------------ceeeEee-ccc--------cceEEEEeee
Q psy10566 473 HPVMSFTIDATD-RLALLNVSTQGVHLWDLRDR------------------ILLRKFQ-GVT--------QGQFTIHSCF 524 (604)
Q Consensus 473 ~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~------------------~~~~~~~-~~~--------~~~~~i~~~~ 524 (604)
-...++.++|.. .++++|+.|-..++||.+.. .+++.|. +|. ....++..+.
T Consensus 201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt 280 (758)
T KOG1310|consen 201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT 280 (758)
T ss_pred heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence 346788999865 67889999999999995321 1233332 221 1123455567
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
++|+|.-+...-..-.|+++|+..++....+
T Consensus 281 fnpNGtElLvs~~gEhVYlfdvn~~~~~~~y 311 (758)
T KOG1310|consen 281 FNPNGTELLVSWGGEHVYLFDVNEDKSPTPY 311 (758)
T ss_pred ECCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence 7899876665555557999999987765543
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.1e-14 Score=136.01 Aligned_cols=194 Identities=20% Similarity=0.216 Sum_probs=145.1
Q ss_pred EEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc--
Q psy10566 396 TSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-- 470 (604)
Q Consensus 396 ~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-- 470 (604)
..++|+.+|..+++|+.||.+++|+. +...+.....+ .|.++.|+|||+.+++.+.| ..+||+.+++.......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 68999999999999999999999995 44444433333 79999999999999999999 99999999884443333
Q ss_pred -CCCCeeEEEECCCC---CE--EEEEecCCeEEEEecCCCce--eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEE
Q psy10566 471 -EDHPVMSFTIDATD---RL--ALLNVSTQGVHLWDLRDRIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVY 542 (604)
Q Consensus 471 -~~~~i~~~~~s~~~---~~--l~~~~~dg~I~lwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~ 542 (604)
.......+.|+.++ .+ ++.....+.|+.||+..... .............+.++..+++|++++.|+.||.|-
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 23445667777666 22 33333345677777653221 111111111222567778899999999999999999
Q ss_pred EEeCCCCcceEEe-eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 543 IWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 543 iwd~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
|++..+-+.++-. +.|...|+.+.|+|+ .+.+++.+.|....|-.+.-
T Consensus 307 i~~~~~lq~~~~vk~aH~~~VT~ltF~Pd-sr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 307 IYDAKSLQRLQYVKEAHLGFVTGLTFSPD-SRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEeceeeeeEeehhhheeeeeeEEEcCC-cCcccccccCCceeEEEEee
Confidence 9999988777655 469999999999999 89999999999999887765
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-12 Score=137.36 Aligned_cols=234 Identities=12% Similarity=0.087 Sum_probs=160.4
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-CceEEEEEECCCceEEEEecCCCCCCeEEEEEe
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-DCHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 401 (604)
..|.+||.+ +.....+..|...+.+.+|+|||+.|+..+.. +...|++||+.++...... ...+.+...+|+
T Consensus 182 ~~l~~~d~d-----g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~--~~~g~~~~~~~S 254 (435)
T PRK05137 182 KRLAIMDQD-----GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVG--NFPGMTFAPRFS 254 (435)
T ss_pred eEEEEECCC-----CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEee--cCCCcccCcEEC
Confidence 467888875 12234566688899999999999999887643 2348999999988754332 234567788999
Q ss_pred cCCCEEE-EEecCC--eEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeC-CC--eEEEEEcCCCcccccccCCC
Q psy10566 402 RDGTKFV-CGGIRG--QFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADT-HH--RIRTYNFEHLTDSNLLQEDH 473 (604)
Q Consensus 402 ~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~-dg--~I~i~d~~~~~~~~~~~~~~ 473 (604)
|||+.++ +.+.++ .|++||+.+.....+..+ ......|+|||+.++..+. +| .|+++|+.+.....+.....
T Consensus 255 PDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~ 334 (435)
T PRK05137 255 PDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGG 334 (435)
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCC
Confidence 9999876 445555 477788876555555443 3566899999999887764 33 68888987766555544455
Q ss_pred CeeEEEECCCCCEEEEEecC---CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC------CcEEEE
Q psy10566 474 PVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED------GKVYIW 544 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d------g~I~iw 544 (604)
.+....|+|+|+.++....+ ..|.+||+.++.. +.+... . .+....|+|||++|+..+.+ ..++++
T Consensus 335 ~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~-~---~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~ 409 (435)
T PRK05137 335 RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTSG-F---LVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTV 409 (435)
T ss_pred cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccCC-C---CCCCCeECCCCCEEEEEEccCCCCCcceEEEE
Confidence 66778999999999887654 3588899865533 333221 1 12334567999988776543 258888
Q ss_pred eCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 545 HVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
|+..+.. ..+. ..+.+...+|+|-
T Consensus 410 dl~g~~~-~~l~-~~~~~~~p~Wsp~ 433 (435)
T PRK05137 410 DLTGRNE-REVP-TPGDASDPAWSPL 433 (435)
T ss_pred ECCCCce-EEcc-CCCCccCcccCCC
Confidence 8876554 4554 3445777888874
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-13 Score=124.95 Aligned_cols=194 Identities=15% Similarity=0.206 Sum_probs=150.8
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.+.+..++|+.|...|++++|+|..+.|++|+.|..-+||... ..++.++...+..++..++++.|+|.++.+++++..
T Consensus 43 ~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~-~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSga 121 (361)
T KOG1523|consen 43 DLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQP-SGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGA 121 (361)
T ss_pred CCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccC-CCCeeccceeEEEeccceeeEeecCcCceEEeccCc
Confidence 3467789999999999999999999999999999999999983 256778888888899999999999999999999998
Q ss_pred CceEEEEEECCCce---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-----CC--------------Cee
Q psy10566 369 DCHELWVWNIETEL---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-----EG--------------QVL 426 (604)
Q Consensus 369 ~~~~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-----~~--------------~~~ 426 (604)
. .|.||-.+... ....+...+.+.|++++|+|++-.+++|+.|+..++|.. +. ..+
T Consensus 122 r--~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm 199 (361)
T KOG1523|consen 122 R--LISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLM 199 (361)
T ss_pred c--EEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHH
Confidence 8 56666554332 222344456788999999999999999999999999864 21 122
Q ss_pred eee--eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--ccccccCCCCeeEEEECCCCC
Q psy10566 427 DSW--EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT--DSNLLQEDHPVMSFTIDATDR 485 (604)
Q Consensus 427 ~~~--~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~--~~~~~~~~~~i~~~~~s~~~~ 485 (604)
.++ .+.-+..+.|+|+|+.++-.+.|..+.+-|..... ........-|..++.|-.+..
T Consensus 200 ~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~ 262 (361)
T KOG1523|consen 200 SEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISENS 262 (361)
T ss_pred HhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCCc
Confidence 222 23358999999999999999999999999987764 222222345666666654433
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.2e-12 Score=119.78 Aligned_cols=291 Identities=16% Similarity=0.219 Sum_probs=189.0
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCC-eEEEEeCCCceEEEEEECCC
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSS-HLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~~ 380 (604)
.+..++|++.-..+|++..|-.|++|+-.. +....++. ....|+|++|-|.+. .|+.++..+ |.+|....
T Consensus 100 dlr~~aWhqH~~~fava~nddvVriy~kss-----t~pt~Lks~sQrnvtclawRPlsaselavgCr~g---IciW~~s~ 171 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSS-----TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG---ICIWSDSR 171 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEEeccCC-----CCCceecchhhcceeEEEeccCCcceeeeeecce---eEEEEcCc
Confidence 467789998767788999999999999762 22233332 346799999999754 566666666 99998653
Q ss_pred ceE------------EEEecCCCCCCeEEEEEecCCCEEEEEecC-CeEEEEEcCC---CeeeeeeceeEEEEEEcCCCC
Q psy10566 381 ELL------------RVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-GQFYQCDIEG---QVLDSWEGVRVNCLWCRSDGK 444 (604)
Q Consensus 381 ~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~---~~~~~~~~~~v~~l~~s~~g~ 444 (604)
... ...+......+|+++.|.+||..+++++.+ ..|.+||.+. ..+.......+.-+.|+|||.
T Consensus 172 tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd 251 (445)
T KOG2139|consen 172 TLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGD 251 (445)
T ss_pred ccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCC
Confidence 211 111122233689999999999999998875 5899999953 233323334688999999999
Q ss_pred EEEEEeCCCeEEEEEcCC-CcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC----Cc-----------eee
Q psy10566 445 SVLAADTHHRIRTYNFEH-LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD----RI-----------LLR 508 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~----~~-----------~~~ 508 (604)
++++++.|+..++|+... -......-..+.|...+|+|+|++++..+... -++|.+.- .. ++.
T Consensus 252 ~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgs-p~lysl~f~~~~~~~~~~~~~k~~llia 330 (445)
T KOG2139|consen 252 VLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGS-PRLYSLTFDGEDSVFLRPQSIKRVLLIA 330 (445)
T ss_pred EEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCC-ceEEEEeecCCCccccCcccceeeeeec
Confidence 999999999999996543 33444444556999999999999988776533 33444321 10 000
Q ss_pred Eee------ccccceEEEEeeeCCCCCcEEEEEeCCC--------cEEEEeCCCCcceEEee-CC--CCCeeEEEEcCC-
Q psy10566 509 KFQ------GVTQGQFTIHSCFGGANQDFVASGSEDG--------KVYIWHVKRELPIATLS-GH--TRTVSCVAWNPV- 570 (604)
Q Consensus 509 ~~~------~~~~~~~~i~~~~~~~~~~~l~sgs~dg--------~I~iwd~~~~~~~~~l~-~h--~~~V~~v~~sp~- 570 (604)
.+. +..--.....++++.|.|.++|+.-..+ .|.+||.+..-++.-.. +- ......++|+|-
T Consensus 331 DL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~ 410 (445)
T KOG2139|consen 331 DLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLK 410 (445)
T ss_pred cchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecc
Confidence 010 1000112345577889999999875543 47778877544433221 11 122455666653
Q ss_pred -CCcEEEEEeCCCcEEEECCCCCCCCCccccCC
Q psy10566 571 -YHQMIASVSDDCTVRIWGPHLNTNKSPHLASS 602 (604)
Q Consensus 571 -~~~~l~s~s~Dg~I~iW~~~~~~~~~~~~~~s 602 (604)
.+.+|..|=..|.+.-|.+.-.....|.+.+.
T Consensus 411 n~g~lLsiaWsTGriq~ypl~f~~~~~p~~~~~ 443 (445)
T KOG2139|consen 411 NEGRLLSIAWSTGRIQRYPLTFQCFRDPQLYHN 443 (445)
T ss_pred cCCcEEEEEeccCceEeeeeEEEeecccccccc
Confidence 35667777777888888776555445554443
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.9e-12 Score=118.40 Aligned_cols=246 Identities=16% Similarity=0.260 Sum_probs=172.0
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC-ceeEeeEEeccCC------------CCeeEEEECCCCC--eEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT-FTCQHRKTLEGHT------------LGVAYLAWSPDSS--HLLV 364 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~-~~~~~~~~l~~h~------------~~V~~l~~spd~~--~l~s 364 (604)
-.+-|.++.|..+|.+||||..+|.|.++.-+... +.......++.|. ..|..+.|.++++ .++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 34678999999999999999999999999765222 2333445555554 4588899998764 5667
Q ss_pred EeCCCceEEEEEECCCce-----------------------------------EEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10566 365 VGPEDCHELWVWNIETEL-----------------------------------LRVKLNHSPEDSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 365 ~~~d~~~~i~vwd~~~~~-----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s 409 (604)
.+.|. +|++|.+.... +.+.+...|.-.|.++.++.|+..+++
T Consensus 104 stNdk--tiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lS 181 (433)
T KOG1354|consen 104 STNDK--TIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLS 181 (433)
T ss_pred ecCCc--ceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEee
Confidence 77787 89999875321 122333456777999999999988887
Q ss_pred EecCCeEEEEEcC--CCe--eeeeece-------eEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCccc----cccc---
Q psy10566 410 GGIRGQFYQCDIE--GQV--LDSWEGV-------RVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDS----NLLQ--- 470 (604)
Q Consensus 410 ~~~dg~i~iwd~~--~~~--~~~~~~~-------~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~----~~~~--- 470 (604)
+. |=.|.+|+++ .+. +...+.+ -|++..|+|. .+.++..++.|+|++.|++..... .++.
T Consensus 182 AD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepe 260 (433)
T KOG1354|consen 182 AD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPE 260 (433)
T ss_pred cc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhcccc
Confidence 64 6789999884 222 2222222 3778889995 567888889999999999843111 1111
Q ss_pred ----------CCCCeeEEEECCCCCEEEEEecCCeEEEEec-CCCceeeEeecccc------------ceEEEEeeeCCC
Q psy10566 471 ----------EDHPVMSFTIDATDRLALLNVSTQGVHLWDL-RDRILLRKFQGVTQ------------GQFTIHSCFGGA 527 (604)
Q Consensus 471 ----------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~-~~~~~~~~~~~~~~------------~~~~i~~~~~~~ 527 (604)
.-..|..+.|+++|+++++-. --+|++||+ ...+++.++..|.. .++.---|.++.
T Consensus 261 dp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg 339 (433)
T KOG1354|consen 261 DPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSG 339 (433)
T ss_pred CCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcC
Confidence 124678899999999998753 257999999 45677777776542 111112244567
Q ss_pred CCcEEEEEeCCCcEEEEeCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
++.++++||..+..++++...|
T Consensus 340 ~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 340 NDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred CcceEecccccceEEEecCCCC
Confidence 8889999999999999996543
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.4e-12 Score=133.60 Aligned_cols=208 Identities=17% Similarity=0.167 Sum_probs=147.6
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEEC---CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEE-Ee
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSK---DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV-VG 366 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~---dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s-~~ 366 (604)
....+.+..|...|.+.+|||||+.|+..+. +..|.+||+. ++.. ..+..+.+.+.+.+|+|||+.|+. .+
T Consensus 191 g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~--~g~~---~~l~~~~g~~~~~~~SPDG~~la~~~~ 265 (435)
T PRK05137 191 GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLE--TGQR---ELVGNFPGMTFAPRFSPDGRKVVMSLS 265 (435)
T ss_pred CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECC--CCcE---EEeecCCCcccCcEECCCCCEEEEEEe
Confidence 3445567788889999999999999988764 4679999997 3222 234445567788999999998764 44
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C--eEEEEEcCCCeeeeeec--eeEEEEEEcC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G--QFYQCDIEGQVLDSWEG--VRVNCLWCRS 441 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~--~~v~~l~~s~ 441 (604)
.++...|++||+.++.... +. .+........|+|||+.++..+.. | .|+++|+++...+.+.. ..+....|+|
T Consensus 266 ~~g~~~Iy~~d~~~~~~~~-Lt-~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~Sp 343 (435)
T PRK05137 266 QGGNTDIYTMDLRSGTTTR-LT-DSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSP 343 (435)
T ss_pred cCCCceEEEEECCCCceEE-cc-CCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECC
Confidence 5554579999999887644 33 234456778999999998877643 3 68888987655554432 3456688999
Q ss_pred CCCEEEEEeCC---CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC------CeEEEEecCCCce
Q psy10566 442 DGKSVLAADTH---HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST------QGVHLWDLRDRIL 506 (604)
Q Consensus 442 ~g~~l~~~~~d---g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------g~I~lwd~~~~~~ 506 (604)
+|+.++....+ ..|.+||..+... ..+.....+....|+|||+.++..+.+ ..++++|+..+..
T Consensus 344 dG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 344 RGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred CCCEEEEEEcCCCceEEEEEECCCCce-EeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 99999887654 3688888765543 233333456788999999998876553 2577888765543
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.8e-11 Score=123.55 Aligned_cols=266 Identities=12% Similarity=0.050 Sum_probs=174.9
Q ss_pred EEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeE
Q psy10566 317 ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT 396 (604)
Q Consensus 317 asgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~ 396 (604)
++-..++.|.|.|.. +.+.+..+......-..+.|+|||+++++++.|+ .|.++|+.+++.+.++..+ ....
T Consensus 10 V~~~~~~~v~viD~~----t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg--~vsviD~~~~~~v~~i~~G--~~~~ 81 (369)
T PF02239_consen 10 VVERGSGSVAVIDGA----TNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDG--TVSVIDLATGKVVATIKVG--GNPR 81 (369)
T ss_dssp EEEGGGTEEEEEETT----T-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTS--EEEEEETTSSSEEEEEE-S--SEEE
T ss_pred EEecCCCEEEEEECC----CCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCC--eEEEEECCcccEEEEEecC--CCcc
Confidence 455578999999987 5666777775544445678999999999999887 8999999999999888744 4578
Q ss_pred EEEEecCCCEEEEEe-cCCeEEEEEc-CCCeeeeeec---------eeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCc
Q psy10566 397 SCSWNRDGTKFVCGG-IRGQFYQCDI-EGQVLDSWEG---------VRVNCLWCRSDGKSVLAADT-HHRIRTYNFEHLT 464 (604)
Q Consensus 397 ~~~~~~~~~~l~s~~-~dg~i~iwd~-~~~~~~~~~~---------~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~ 464 (604)
++++++||++++++. ..+.+.++|. +.+.++.... .++..+..++....++..-. .+.|.+.|.....
T Consensus 82 ~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~ 161 (369)
T PF02239_consen 82 GIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPK 161 (369)
T ss_dssp EEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSS
T ss_pred eEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccc
Confidence 999999999998876 5789999998 4566665543 25778888888886665555 5889999987754
Q ss_pred cc--ccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCceeeEeec----cccceEEEE-------eeeCCCCCc
Q psy10566 465 DS--NLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRILLRKFQG----VTQGQFTIH-------SCFGGANQD 530 (604)
Q Consensus 465 ~~--~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~~~~~~~----~~~~~~~i~-------~~~~~~~~~ 530 (604)
.. ..+..........|+|++++++++ ..++.|.++|.++++.+..+.. |......+- +.. ...+.
T Consensus 162 ~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~-~~~~~ 240 (369)
T PF02239_consen 162 NLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWAT-SGLGY 240 (369)
T ss_dssp CEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEE-EBSSS
T ss_pred ccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEee-ccccc
Confidence 33 234456677889999999987765 5577899999999887765542 221111110 011 11223
Q ss_pred EEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE----eCCCcEEEECCCCCC
Q psy10566 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV----SDDCTVRIWGPHLNT 593 (604)
Q Consensus 531 ~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~----s~Dg~I~iW~~~~~~ 593 (604)
+.++.-....+.+||..+.+.+.++....++ ..+..||+ +.++... .+.++|.++|.++.+
T Consensus 241 ~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~-s~~vwvd~~~~~~~~~v~viD~~tl~ 305 (369)
T PF02239_consen 241 FAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPD-SRYVWVDTFLNPDADTVQVIDKKTLK 305 (369)
T ss_dssp SEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT--SEEEEE-TT-SSHT-EEEEECCGTE
T ss_pred eecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCC-CccEEeeccCCCCCceEEEEECcCcc
Confidence 3323333346678999999999999987666 78889999 6677666 556899999998763
|
... |
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-13 Score=132.18 Aligned_cols=273 Identities=14% Similarity=0.153 Sum_probs=203.8
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.-..+.++.+|++|+.|+.-|.|-.+|.. +......+. -...|..+.|-.+..+++++-.. .+++||-. |.
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~----t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVAQK~---y~yvYD~~-Gt 201 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWV----TKKLHFEIN-VMETVRDVTFLHNEQFFAVAQKK---YVYVYDNN-GT 201 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecc----cceeeeeee-hhhhhhhhhhhcchHHHHhhhhc---eEEEecCC-Cc
Confidence 45668999999999999999999999988 555555554 24568999999998888887655 59999965 44
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeec--eeEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYN 459 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~--~~v~~l~~s~~g~~l~~~~~dg~I~i~d 459 (604)
.+..+. ....|..+.|.|..-.|++++..|.+..-|+ .|+.+..+.. .++..+.-+|-...+-+|..+|+|.+|.
T Consensus 202 ElHClk--~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWS 279 (545)
T KOG1272|consen 202 ELHCLK--RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWS 279 (545)
T ss_pred EEeehh--hcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecC
Confidence 455554 2356899999999999999999999999999 4777766543 2677788899899999999999999999
Q ss_pred cCCCcc-cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC
Q psy10566 460 FEHLTD-SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED 538 (604)
Q Consensus 460 ~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d 538 (604)
....+. ..++.|.++|.++++.++|.++++++.|..++|||+++...+.++.... ....+.+|..| +|| .+..
T Consensus 280 P~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~----~a~~ls~Sqkg-lLA-~~~G 353 (545)
T KOG1272|consen 280 PNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPH----PASNLSLSQKG-LLA-LSYG 353 (545)
T ss_pred CCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCC----Ccccccccccc-cee-eecC
Confidence 988654 5567799999999999999999999999999999999987766665411 12223334443 344 4455
Q ss_pred CcEEEEeCC-C--CcceEEeeCC--CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 539 GKVYIWHVK-R--ELPIATLSGH--TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 539 g~I~iwd~~-~--~~~~~~l~~h--~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..|.||.-. . +.....+-.| .+.|..+.|.|- ..+|-.|-..|.-.|-=+-.|+
T Consensus 354 ~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~-EDvLGIGH~~G~tsilVPGsGe 412 (545)
T KOG1272|consen 354 DHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPY-EDVLGIGHAGGITSILVPGSGE 412 (545)
T ss_pred CeeeeehhhhcCCCCCCcchhhhccCcccccceeccH-HHeeeccccCCceeEeccCCCC
Confidence 679999532 2 1222222234 468999999997 6777776666655555444444
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.3e-12 Score=133.47 Aligned_cols=210 Identities=17% Similarity=0.182 Sum_probs=143.7
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEE-EeCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV-VGPE 368 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s-~~~d 368 (604)
..+.+..|...+.+.+|+|||+.|+..+.+ ..|.+||+. ++....+. ...+...+.+|+|||+.++. .+.+
T Consensus 195 ~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~--~g~~~~l~---~~~g~~~~~~~SpDG~~l~~~~s~~ 269 (433)
T PRK04922 195 NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLA--TGQRELVA---SFRGINGAPSFSPDGRRLALTLSRD 269 (433)
T ss_pred CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECC--CCCEEEec---cCCCCccCceECCCCCEEEEEEeCC
Confidence 345566788889999999999999988743 469999997 33333332 33344557899999998764 4555
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCeeeee--eceeEEEEEEcCCC
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RG--QFYQCDIEGQVLDSW--EGVRVNCLWCRSDG 443 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~--~~~~v~~l~~s~~g 443 (604)
+...|++||+.++...... .+.......+|+|||+.++.++. +| .|+++|+.+.....+ .+......+|+|+|
T Consensus 270 g~~~Iy~~d~~~g~~~~lt--~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG 347 (433)
T PRK04922 270 GNPEIYVMDLGSRQLTRLT--NHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDG 347 (433)
T ss_pred CCceEEEEECCCCCeEECc--cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCC
Confidence 5457999999988754432 23344567899999999887764 44 466777754333332 33345568999999
Q ss_pred CEEEEEeCCC---eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecCCCceeeEee
Q psy10566 444 KSVLAADTHH---RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 444 ~~l~~~~~dg---~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~ 511 (604)
+.++..+.++ .|.+||+.++....+ .+........|+|+|++++..+.+ +.++++++..+ ..+.+.
T Consensus 348 ~~Ia~~~~~~~~~~I~v~d~~~g~~~~L-t~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~-~~~~l~ 419 (433)
T PRK04922 348 KKIAMVHGSGGQYRIAVMDLSTGSVRTL-TPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR-VRQRLV 419 (433)
T ss_pred CEEEEEECCCCceeEEEEECCCCCeEEC-CCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC-ceEEcc
Confidence 9998876543 699999987765433 333345567999999998877663 35778887543 344443
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.8e-11 Score=119.16 Aligned_cols=275 Identities=16% Similarity=0.200 Sum_probs=180.3
Q ss_pred EEEEECC----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--CceEEEEEECCCc--eE--EE
Q psy10566 316 LATGSKD----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--DCHELWVWNIETE--LL--RV 385 (604)
Q Consensus 316 lasgs~d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--~~~~i~vwd~~~~--~~--~~ 385 (604)
++.|+.+ +.|.+|+++..+++...+.... -......++++|++++|.++... ..+.|..|++... .+ +.
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 4556665 7899999976667776666644 34557789999999999998874 3457888887653 33 22
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcC--CCeeee---ee------------ceeEEEEEEcCCCCEEE
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIE--GQVLDS---WE------------GVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~--~~~~~~---~~------------~~~v~~l~~s~~g~~l~ 447 (604)
.... .......++++|++++++++.. +|.|.+++++ |..... +. .....++.++|+|++++
T Consensus 81 ~~~~-~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~ 159 (345)
T PF10282_consen 81 SVPS-GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVY 159 (345)
T ss_dssp EEEE-SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEE
T ss_pred eecc-CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEE
Confidence 2221 3345678999999999999875 7899999995 332222 11 12477899999999988
Q ss_pred EEeC-CCeEEEEEcCCCc--ccc----cccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecC--CCc--eeeEeeccc-
Q psy10566 448 AADT-HHRIRTYNFEHLT--DSN----LLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLR--DRI--LLRKFQGVT- 514 (604)
Q Consensus 448 ~~~~-dg~I~i~d~~~~~--~~~----~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~--~~~--~~~~~~~~~- 514 (604)
+.+. ...|.+|++.... ... ..........++|+|+++++++... ++.|.+|++. ++. .+..+....
T Consensus 160 v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~ 239 (345)
T PF10282_consen 160 VPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE 239 (345)
T ss_dssp EEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET
T ss_pred EEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc
Confidence 8765 3579999997654 211 2344677889999999998877665 6789999988 342 222222111
Q ss_pred --cceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCC--CCcc--eEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 515 --QGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVK--RELP--IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 515 --~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~--~~~~--~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
........+..+|+|++|+++.. .+.|.+|++. ++++ +..+.........++++|++..+++++-.++.|.+|
T Consensus 240 ~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf 319 (345)
T PF10282_consen 240 GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVF 319 (345)
T ss_dssp TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEE
Confidence 11112233455799999887764 6789999994 3433 333443345589999999954445555577899999
Q ss_pred CCCCC
Q psy10566 588 GPHLN 592 (604)
Q Consensus 588 ~~~~~ 592 (604)
+++..
T Consensus 320 ~~d~~ 324 (345)
T PF10282_consen 320 DIDPD 324 (345)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 87543
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-12 Score=118.60 Aligned_cols=157 Identities=16% Similarity=0.318 Sum_probs=116.7
Q ss_pred eEEEECCCCCeEEEEeC---CC-----ceEEEEEECCC-ceEEEEecCCCCCCeEEEEEecCCCEEEEE--ecCCeEEEE
Q psy10566 351 AYLAWSPDSSHLLVVGP---ED-----CHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG--GIRGQFYQC 419 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~---d~-----~~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~dg~i~iw 419 (604)
..+.|+|+|++|++-.. |. .+...+|.++. +.....+.....++|.+++|+|+|+.|++. ..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 45789999988876544 11 12344454422 223333333344579999999999987654 356799999
Q ss_pred EcCCCeeeeeeceeEEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec----
Q psy10566 420 DIEGQVLDSWEGVRVNCLWCRSDGKSVLAADT---HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS---- 492 (604)
Q Consensus 420 d~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~---dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---- 492 (604)
|++++.+..+....++.+.|+|+|+++++++. .|.|.+||.++.+......+. .++.++|+|+|++++++..
T Consensus 89 d~~~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-~~t~~~WsPdGr~~~ta~t~~r~ 167 (194)
T PF08662_consen 89 DVKGKKIFSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-DATDVEWSPDGRYLATATTSPRL 167 (194)
T ss_pred cCcccEeEeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC-cEEEEEEcCCCCEEEEEEeccce
Confidence 99999999988888999999999999999875 467999999977766655554 4789999999999999875
Q ss_pred --CCeEEEEecCCCceeeE
Q psy10566 493 --TQGVHLWDLRDRILLRK 509 (604)
Q Consensus 493 --dg~I~lwd~~~~~~~~~ 509 (604)
|+.++||+.. |+.+..
T Consensus 168 ~~dng~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 168 RVDNGFKIWSFQ-GRLLYK 185 (194)
T ss_pred eccccEEEEEec-CeEeEe
Confidence 6778999974 545443
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-11 Score=122.19 Aligned_cols=274 Identities=15% Similarity=0.222 Sum_probs=169.0
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe-----CCC---ceEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG-----PED---CHEL 373 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~-----~d~---~~~i 373 (604)
..+...++|++|+++|.+. +..++|++.. ....+.+.. ...++++.|||.|.+|.+-- .++ ...+
T Consensus 35 ~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~----~~~~~lt~~--~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~ 107 (566)
T KOG2315|consen 35 RPCNVFAYSNNGRLFAYSD-NQVVKVFEIA----TLKVVLCVE--LKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNV 107 (566)
T ss_pred CcceeEEEcCCCcEEEEEc-CCeEEEEEcc----CCcEEEEec--cceeeeeeecccccccccccccccccCCCCCCCce
Confidence 3477889999999988764 6789999987 221222222 22689999999999887631 111 1248
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--CeeeeeeceeEEE---------------
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGVRVNC--------------- 436 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~v~~--------------- 436 (604)
.+|+++++.....+....... ++..|++|..+.+ --..+.+.+|++.+ .....+....+..
T Consensus 108 ~v~~vet~~~~s~~q~k~Q~~-W~~qfs~dEsl~a-rlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvy 185 (566)
T KOG2315|consen 108 LVYNVETGVQRSQIQKKMQNG-WVPQFSIDESLAA-RLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVY 185 (566)
T ss_pred eeeeeccceehhheehhhhcC-cccccccchhhhh-hhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEE
Confidence 899999865444443222221 3455554433211 11123344444421 1111112222222
Q ss_pred -------------------------------------EEEcCCCCEE-EEEeC-----------CCeEEEEEcCCCcccc
Q psy10566 437 -------------------------------------LWCRSDGKSV-LAADT-----------HHRIRTYNFEHLTDSN 467 (604)
Q Consensus 437 -------------------------------------l~~s~~g~~l-~~~~~-----------dg~I~i~d~~~~~~~~ 467 (604)
+.|.+-|.-| +.++. ..+++++++.......
T Consensus 186 vPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V 265 (566)
T KOG2315|consen 186 VPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSV 265 (566)
T ss_pred ccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEE
Confidence 2333333321 11111 1356666666444444
Q ss_pred cccCCCCeeEEEECCCCCEEEE--EecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC---CcEE
Q psy10566 468 LLQEDHPVMSFTIDATDRLALL--NVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED---GKVY 542 (604)
Q Consensus 468 ~~~~~~~i~~~~~s~~~~~l~~--~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d---g~I~ 542 (604)
-+...++|.++.|+|+++.+++ |..-..+.+||++.. ++..+. .+. -..++++|.|++|+.++-+ |.|-
T Consensus 266 ~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~-~v~df~--egp---RN~~~fnp~g~ii~lAGFGNL~G~mE 339 (566)
T KOG2315|consen 266 PLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK-PVFDFP--EGP---RNTAFFNPHGNIILLAGFGNLPGDME 339 (566)
T ss_pred ecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC-EeEeCC--CCC---ccceEECCCCCEEEEeecCCCCCceE
Confidence 4556899999999999976655 455778999998654 444443 221 2335678999999988764 8999
Q ss_pred EEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC------CCcEEEECCCCCC
Q psy10566 543 IWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD------DCTVRIWGPHLNT 593 (604)
Q Consensus 543 iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~------Dg~I~iW~~~~~~ 593 (604)
|||+.+.+++..+..-.. +-+.|+|| +.+|+|++. |+.++||++....
T Consensus 340 vwDv~n~K~i~~~~a~~t--t~~eW~Pd-Ge~flTATTaPRlrvdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 340 VWDVPNRKLIAKFKAANT--TVFEWSPD-GEYFLTATTAPRLRVDNGIKIWHYTGSL 393 (566)
T ss_pred EEeccchhhccccccCCc--eEEEEcCC-CcEEEEEeccccEEecCCeEEEEecCce
Confidence 999999998888876543 56789999 778877764 6889999987643
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.8e-12 Score=130.24 Aligned_cols=210 Identities=17% Similarity=0.143 Sum_probs=139.6
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEE-EeCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV-VGPE 368 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s-~~~d 368 (604)
..+.+..+...+.+.+|||||+.|+..+.+ ..|.+||+. ++....+ ....+.+.+.+|+|||+.|+. .+.+
T Consensus 187 ~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~--~g~~~~l---~~~~g~~~~~~~SPDG~~la~~~~~~ 261 (427)
T PRK02889 187 NAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLA--TGRRRVV---ANFKGSNSAPAWSPDGRTLAVALSRD 261 (427)
T ss_pred CceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECC--CCCEEEe---ecCCCCccceEECCCCCEEEEEEccC
Confidence 344556788899999999999999887643 359999997 3332222 223345668899999998875 4556
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-CCeEEEE--EcCCCeeee--eeceeEEEEEEcCCC
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQC--DIEGQVLDS--WEGVRVNCLWCRSDG 443 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iw--d~~~~~~~~--~~~~~v~~l~~s~~g 443 (604)
+...|+++|+.++.. ..+. .+........|+|||+.++..+. +|...+| ++.+..... +.+.......|+|+|
T Consensus 262 g~~~Iy~~d~~~~~~-~~lt-~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG 339 (427)
T PRK02889 262 GNSQIYTVNADGSGL-RRLT-QSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDG 339 (427)
T ss_pred CCceEEEEECCCCCc-EECC-CCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCC
Confidence 644677777776653 3333 23345667889999998887664 3555555 444433322 233334467899999
Q ss_pred CEEEEEeCCC---eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC---eEEEEecCCCceeeEee
Q psy10566 444 KSVLAADTHH---RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ---GVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 444 ~~l~~~~~dg---~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~ 511 (604)
++++..+.++ .|.+||+.++....+.. ........|+|+++.++.++.++ .+++.++ ++...+.+.
T Consensus 340 ~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~-~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~ 411 (427)
T PRK02889 340 KLLAYISRVGGAFKLYVQDLATGQVTALTD-TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLS 411 (427)
T ss_pred CEEEEEEccCCcEEEEEEECCCCCeEEccC-CCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEee
Confidence 9998877654 69999998876544433 23446789999999998887654 2555555 344444443
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-12 Score=121.59 Aligned_cols=260 Identities=17% Similarity=0.187 Sum_probs=182.9
Q ss_pred CCCcEEEEEEcCCCC--eEEEEECCCeEEEEEeCCCCceeE--eeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 300 HCDEVWFCKFSPDGL--KLATGSKDTTVIIWDVDPVTFTCQ--HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 300 H~~~V~~v~fspdg~--~lasgs~dg~i~iwd~~~~~~~~~--~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
-...|..++|..+++ .|...+.|..+..+.+........ ..........+|..++.. +..|++|-.+| .+.+
T Consensus 54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG--~l~~ 129 (412)
T KOG3881|consen 54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSG--NLQV 129 (412)
T ss_pred hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCC--cEEE
Confidence 345677788877665 455555666777776652211111 112334456677777654 33677777776 7999
Q ss_pred EECCCce----EEEEecCCCCCCeEEEEEecCCC-EEEEEecC--CeEEEEEcCCCeeeeeece-------------eEE
Q psy10566 376 WNIETEL----LRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIR--GQFYQCDIEGQVLDSWEGV-------------RVN 435 (604)
Q Consensus 376 wd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d--g~i~iwd~~~~~~~~~~~~-------------~v~ 435 (604)
|..+.+. ....+. ....+..+.-++... .+++|+.. ..+.+||+++. .+.|... -++
T Consensus 130 ~~~k~~d~hss~l~~la--~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~-~qiw~aKNvpnD~L~LrVPvW~t 206 (412)
T KOG3881|consen 130 RHDKSGDLHSSKLIKLA--TGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS-KQIWSAKNVPNDRLGLRVPVWIT 206 (412)
T ss_pred EeccCCccccccceeee--cCCceeeeccCCCCCceEecCchhcccceeeeecccc-eeeeeccCCCCccccceeeeeec
Confidence 9988543 222222 224566666666554 45558888 78999999654 4444431 367
Q ss_pred EEEEcCC--CCEEEEEeCCCeEEEEEcCCCcc-cccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE-e
Q psy10566 436 CLWCRSD--GKSVLAADTHHRIRTYNFEHLTD-SNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK-F 510 (604)
Q Consensus 436 ~l~~s~~--g~~l~~~~~dg~I~i~d~~~~~~-~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~-~ 510 (604)
++.|.+. ...+++++.-+.+++||.+..+. ...+ ....+++++...|+++++++|...+.+..||++.++.... +
T Consensus 207 di~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~ 286 (412)
T KOG3881|consen 207 DIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGL 286 (412)
T ss_pred cceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeecccc
Confidence 7888887 88999999999999999987543 2222 2478999999999999999999999999999999988766 8
Q ss_pred eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 511 QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 511 ~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.+..+.+..+.+ .|.+.++++++-|..|+|+|+++.+++.... -...++++-+.++
T Consensus 287 kg~tGsirsih~---hp~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~il~~~~ 342 (412)
T KOG3881|consen 287 KGITGSIRSIHC---HPTHPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTFILLRDD 342 (412)
T ss_pred CCccCCcceEEE---cCCCceEEeeccceeEEEeecccchhhhhhh-hhccccEEEecCC
Confidence 888886666654 5888999999999999999999977665443 2345677777554
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.5e-11 Score=112.14 Aligned_cols=233 Identities=14% Similarity=0.171 Sum_probs=156.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC-CCCeEEEEEecCCCEEE-EEecC------CeEEEEE
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP-EDSLTSCSWNRDGTKFV-CGGIR------GQFYQCD 420 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~-s~~~d------g~i~iwd 420 (604)
...+++|+.|...++++..+| .++|+.+--+....-.... .-.+.-+-| ..++++ +||.+ ..+.+||
T Consensus 7 ~~lsvs~NQD~ScFava~~~G---friyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWD 81 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG---FRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWD 81 (346)
T ss_pred ceeEEEEccCCceEEEEecCc---eEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEe
Confidence 345599999999999999888 8999887533211111001 111222222 233443 33333 4799998
Q ss_pred c-CCCeeeeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-cccccccC---CCCeeEEEECCCCCEEEE-EecC
Q psy10566 421 I-EGQVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL-TDSNLLQE---DHPVMSFTIDATDRLALL-NVST 493 (604)
Q Consensus 421 ~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~-~~~~~~~~---~~~i~~~~~s~~~~~l~~-~~~d 493 (604)
- ..+.+.++.-. +|.++.+.++. + +.-..++|++|.+... +....+.. .....+++-..+...|+. |..-
T Consensus 82 D~k~~~i~el~f~~~I~~V~l~r~r--i-Vvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~ 158 (346)
T KOG2111|consen 82 DLKERCIIELSFNSEIKAVKLRRDR--I-VVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKT 158 (346)
T ss_pred cccCcEEEEEEeccceeeEEEcCCe--E-EEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCcc
Confidence 4 45666666543 78888888763 3 3335678999999843 33333322 222333333323333443 3446
Q ss_pred CeEEEEecCCCce--eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc-EEEEeCCCCcceEEeeCC--CCCeeEEEEc
Q psy10566 494 QGVHLWDLRDRIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK-VYIWHVKRELPIATLSGH--TRTVSCVAWN 568 (604)
Q Consensus 494 g~I~lwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~-I~iwd~~~~~~~~~l~~h--~~~V~~v~~s 568 (604)
|.|+|-|+...+. ...+..|... |.++....+|..+||+|..|+ |+|||..+|+++.+++-- ...|.+++||
T Consensus 159 GqvQi~dL~~~~~~~p~~I~AH~s~---Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS 235 (346)
T KOG2111|consen 159 GQVQIVDLASTKPNAPSIINAHDSD---IACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS 235 (346)
T ss_pred ceEEEEEhhhcCcCCceEEEcccCc---eeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC
Confidence 8999999987655 4667788774 555556789999999999997 899999999999998743 4679999999
Q ss_pred CCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|+ ..+||.+|+-|+|.|+.+....
T Consensus 236 p~-~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 236 PN-SSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred CC-ccEEEEEcCCCeEEEEEeecCC
Confidence 99 8999999999999999987754
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-11 Score=112.80 Aligned_cols=242 Identities=14% Similarity=0.186 Sum_probs=159.8
Q ss_pred CCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCcee----------EeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 301 CDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTC----------QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 301 ~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~----------~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
...|+|++|-|.+. -|+.|+.. -|.||..+...... ..+..-++| .+|+++.|.+||..+++++.+.
T Consensus 140 QrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gs 217 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGS 217 (445)
T ss_pred hcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCc
Confidence 45799999999654 67777754 59999876321111 122334455 6899999999999999999876
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeee--eceeEEEEEEcCCCCEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSW--EGVRVNCLWCRSDGKSV 446 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~--~~~~v~~l~~s~~g~~l 446 (604)
..|.+||..++..+..... ..+.++-+.|+||+.+|++++-|+..++|.... .....| ...+|...+|+|+|..+
T Consensus 218 -ssi~iWdpdtg~~~pL~~~-glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfL 295 (445)
T KOG2139|consen 218 -SSIMIWDPDTGQKIPLIPK-GLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFL 295 (445)
T ss_pred -ceEEEEcCCCCCccccccc-CCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEE
Confidence 5899999999987665542 345688999999999999999999999996632 222222 22389999999999987
Q ss_pred EEEeCC-CeEEEEEcCCCccc-------------------ccccC----CCCeeEEEECCCCCEEEEEecCCe-------
Q psy10566 447 LAADTH-HRIRTYNFEHLTDS-------------------NLLQE----DHPVMSFTIDATDRLALLNVSTQG------- 495 (604)
Q Consensus 447 ~~~~~d-g~I~i~d~~~~~~~-------------------~~~~~----~~~i~~~~~s~~~~~l~~~~~dg~------- 495 (604)
+.+... -.++-..+...... .+... .+++.+++|+|.|.++++....+.
T Consensus 296 Lf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~ 375 (445)
T KOG2139|consen 296 LFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKL 375 (445)
T ss_pred EEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhh
Confidence 665543 23332222211100 00111 467889999999999999887654
Q ss_pred -EEEEecCCCceeeEe-eccccc--eEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 496 -VHLWDLRDRILLRKF-QGVTQG--QFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 496 -I~lwd~~~~~~~~~~-~~~~~~--~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
|.+||.+...++.-. -+...+ ...|.+-....++.++..+=..|.+.-|++
T Consensus 376 ~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl 430 (445)
T KOG2139|consen 376 HISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPL 430 (445)
T ss_pred hhhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeee
Confidence 667877665433322 122111 122333333356667777766777766654
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=7e-12 Score=124.07 Aligned_cols=246 Identities=14% Similarity=0.164 Sum_probs=178.2
Q ss_pred cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC
Q psy10566 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ 424 (604)
Q Consensus 345 ~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 424 (604)
.|...-+.|..+|||+|+++.|.-. ..|++||+.+-.+...-. -....|.-.-.+.|-..++.-..|.+|-+...-|.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YK-P~ikvydlanLSLKFERh-lDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~ 126 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYK-PQIKVYDLANLSLKFERH-LDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGR 126 (703)
T ss_pred CCccccceeEecCCCcEEEEecccC-CceEEEEcccceeeeeec-ccccceeEEEeccchhhheEeecCceeeehhhcCe
Confidence 3667788999999999999888776 589999998765433221 22334544555556666777777888777665554
Q ss_pred eeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC-CCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 425 VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE-DHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 425 ~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
....--...-.+++++.-..-++.++....|+-++++.+.....+.. ...++++.+++...++++|+.+|.|..||.++
T Consensus 127 hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ 206 (703)
T KOG2321|consen 127 HYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRD 206 (703)
T ss_pred eeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchh
Confidence 33322222344556655555577777778899999998877666654 48899999999999999999999999999998
Q ss_pred CceeeEeecccc--------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC--CCCeeEEEEcCCCC-
Q psy10566 504 RILLRKFQGVTQ--------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH--TRTVSCVAWNPVYH- 572 (604)
Q Consensus 504 ~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h--~~~V~~v~~sp~~~- 572 (604)
...+.++..... ....+.++.|+.+|-.+++|+.+|.|+|||+++.+++..-. | .-+|..+.|.+.+.
T Consensus 207 ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd-h~~e~pi~~l~~~~~~~q 285 (703)
T KOG2321|consen 207 KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD-HGYELPIKKLDWQDTDQQ 285 (703)
T ss_pred hhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc-cCCccceeeecccccCCC
Confidence 877666553222 11235666777779999999999999999999988876543 5 46899999977633
Q ss_pred cEEEEEeCCCcEEEECCCCCCC
Q psy10566 573 QMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
..++|+ +...++|||..++..
T Consensus 286 ~~v~S~-Dk~~~kiWd~~~Gk~ 306 (703)
T KOG2321|consen 286 NKVVSM-DKRILKIWDECTGKP 306 (703)
T ss_pred ceEEec-chHHhhhcccccCCc
Confidence 345543 457899999998874
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.1e-12 Score=115.89 Aligned_cols=152 Identities=15% Similarity=0.259 Sum_probs=110.4
Q ss_pred EEEEEcCCCCeEEEEEC----------CCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 305 WFCKFSPDGLKLATGSK----------DTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 305 ~~v~fspdg~~lasgs~----------dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
..+.|+|+|++|+.-.. -|...||.++.... ....+.- ..++|.+++|+|+|+.++++.......|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~---~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v 85 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI---PVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKV 85 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC---ccceeeccCCCceEEEEECcCCCEEEEEEccCCccc
Confidence 35789999997764432 23466676642222 2222322 3457999999999999877654322389
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC---CeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEE
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---GQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~ 449 (604)
.+||++ ++.+..+. ...+..+.|+|+|+++++++.+ |.+.+||.+ .+.+.......+..++|+|+|++++++
T Consensus 86 ~lyd~~-~~~i~~~~---~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsPdGr~~~ta 161 (194)
T PF08662_consen 86 TLYDVK-GKKIFSFG---TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWSPDGRYLATA 161 (194)
T ss_pred EEEcCc-ccEeEeec---CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEcCCCCEEEEE
Confidence 999997 55555554 3567899999999999998754 679999995 566666666678999999999999998
Q ss_pred eC------CCeEEEEEcCCC
Q psy10566 450 DT------HHRIRTYNFEHL 463 (604)
Q Consensus 450 ~~------dg~I~i~d~~~~ 463 (604)
+. |..++||++...
T Consensus 162 ~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 162 TTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred EeccceeccccEEEEEecCe
Confidence 75 677899998643
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.2e-10 Score=114.75 Aligned_cols=262 Identities=15% Similarity=0.228 Sum_probs=172.9
Q ss_pred CcEEEEEEcCCCCeEEEEEC----CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSK----DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~----dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd 377 (604)
.....++++|++++|.+... ++.|..|++...++....+............++++|++++|+++...+ +.|.+++
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~-g~v~v~~ 115 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGG-GSVSVFP 115 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccC-CeEEEEE
Confidence 45667899999999988876 578999999865566667776664556677899999999999998755 4899999
Q ss_pred CCC-ceEEEE---ec---------CCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCe--eee---e---eceeEE
Q psy10566 378 IET-ELLRVK---LN---------HSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIEGQV--LDS---W---EGVRVN 435 (604)
Q Consensus 378 ~~~-~~~~~~---~~---------~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~--~~~---~---~~~~v~ 435 (604)
+.. |..... +. ........++.|+|+++++++... ...|.+|+++... +.. + .+....
T Consensus 116 l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPR 195 (345)
T PF10282_consen 116 LDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPR 195 (345)
T ss_dssp ECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEE
T ss_pred ccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCc
Confidence 987 433222 11 112345789999999998888654 3589999985322 322 1 223578
Q ss_pred EEEEcCCCCEEEEEe-CCCeEEEEEcC--CCcc--cc---cc----cCCCCeeEEEECCCCCEEEEEec-CCeEEEEecC
Q psy10566 436 CLWCRSDGKSVLAAD-THHRIRTYNFE--HLTD--SN---LL----QEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLR 502 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~-~dg~I~i~d~~--~~~~--~~---~~----~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~ 502 (604)
.++|+|+++++++.. .++.|.+|++. .+.. .. .. ........+.++|+|++|+++.. .+.|.+|++.
T Consensus 196 h~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d 275 (345)
T PF10282_consen 196 HLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLD 275 (345)
T ss_dssp EEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEEC
T ss_pred EEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEe
Confidence 999999999886665 46789999988 2211 11 11 11235788999999999888765 6789999994
Q ss_pred --CCce--eeEeeccccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeC--CCCcceEEee-CCCCCeeEEEE
Q psy10566 503 --DRIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHV--KRELPIATLS-GHTRTVSCVAW 567 (604)
Q Consensus 503 --~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~--~~~~~~~~l~-~h~~~V~~v~~ 567 (604)
++.. +..+.. .... .+.+.++|+|++|+++.. ++.|.+|++ ++|.+...-. ..-....||.|
T Consensus 276 ~~~g~l~~~~~~~~--~G~~-Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 276 PATGTLTLVQTVPT--GGKF-PRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp TTTTTEEEEEEEEE--SSSS-EEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred cCCCceEEEEEEeC--CCCC-ccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 2333 222221 1111 233445799999998874 678999976 4666544432 22345667765
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-11 Score=127.41 Aligned_cols=234 Identities=21% Similarity=0.188 Sum_probs=153.4
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-CceEEEEEECCCceEEEEecCCCCCCeEEEEEec
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR 402 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 402 (604)
.+.++|.+ ... ...+..+...+.+..|+|||+.|+..+.+ +...|++||+.+++...... ........+|+|
T Consensus 199 ~l~i~d~d--G~~---~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~--~~g~~~~~~wSP 271 (448)
T PRK04792 199 QLMIADYD--GYN---EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTS--FPGINGAPRFSP 271 (448)
T ss_pred EEEEEeCC--CCC---ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecC--CCCCcCCeeECC
Confidence 56666765 111 23344566788999999999999887653 33479999998887543322 123345789999
Q ss_pred CCCEEEE-EecCCe--EEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeC-CC--eEEEEEcCCCcccccccCCCC
Q psy10566 403 DGTKFVC-GGIRGQ--FYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADT-HH--RIRTYNFEHLTDSNLLQEDHP 474 (604)
Q Consensus 403 ~~~~l~s-~~~dg~--i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~-dg--~I~i~d~~~~~~~~~~~~~~~ 474 (604)
||+.|+. .+.+|. |+++|+++.....+..+ ......|+|||+.++..+. ++ .|+++|+.+++...+......
T Consensus 272 DG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~ 351 (448)
T PRK04792 272 DGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQ 351 (448)
T ss_pred CCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCC
Confidence 9998875 455664 77788866555544433 3567889999998877654 33 577778776655444333333
Q ss_pred eeEEEECCCCCEEEEEecC-C--eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-C--cEEEEeCCC
Q psy10566 475 VMSFTIDATDRLALLNVST-Q--GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-G--KVYIWHVKR 548 (604)
Q Consensus 475 i~~~~~s~~~~~l~~~~~d-g--~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-g--~I~iwd~~~ 548 (604)
....+|+|+|++++....+ + .|.++|+.+++... +...... ....++|+|++|+..+.+ | .+++++. +
T Consensus 352 ~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~~~d----~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~ 425 (448)
T PRK04792 352 NLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTSTRLD----ESPSVAPNGTMVIYSTTYQGKQVLAAVSI-D 425 (448)
T ss_pred CcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCCCCC----CCceECCCCCEEEEEEecCCceEEEEEEC-C
Confidence 4567899999998887653 3 46678888775432 2221111 112457999988766553 3 3777786 5
Q ss_pred CcceEEeeCCCCCeeEEEEcCC
Q psy10566 549 ELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 549 ~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
|.....+..+.+.+...+|+|-
T Consensus 426 G~~~~~l~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 426 GRFKARLPAGQGEVKSPAWSPF 447 (448)
T ss_pred CCceEECcCCCCCcCCCccCCC
Confidence 6677777777777888899873
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.5e-13 Score=141.61 Aligned_cols=304 Identities=15% Similarity=0.174 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHhHhcCCCCCCCcccccCccccccccCcCcCCC-----------------------------------
Q psy10566 245 RRLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEF----------------------------------- 289 (604)
Q Consensus 245 ~rl~~ll~q~~~~q~~~~~~~~~~~~~~~~~~~l~~d~~~~~~~~----------------------------------- 289 (604)
..|.+++.+.++.|..+|..+.+.. .+++++..|.|+....
T Consensus 1013 ~sLdSIVt~Ylr~QH~~CknPVtTc----PPfSLf~pH~CPEpk~~~~ap~N~t~Rl~~rel~~~y~gV~g~~~dr~~IF 1088 (1516)
T KOG1832|consen 1013 LSLDSIVTQYLRHQHRQCKNPVTTC----PPFSLFHPHVCPEPKRLLEAPLNMTGRLGTRELQSFYSGVHGNRRDRQFIF 1088 (1516)
T ss_pred CcHHHHHHHHHHHHHHhhcCCcccC----CChhhcCCccCCChHHHhhcchhhhhcccchhhcCcccccccCcccchhhH
Confidence 3599999999999999999776555 6788999998876321
Q ss_pred -CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 290 -PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 290 -p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.++.++++..|+..-+|++|+-+.+.|+.|+..|.|+++++. ++.......+|..+|+.+.-+.||..+++.+..
T Consensus 1089 SRFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~----sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~ 1164 (1516)
T KOG1832|consen 1089 SRFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVS----SGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSS 1164 (1516)
T ss_pred hhcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEcc----CccccccccccccccccccccCCcceeeeeccc
Confidence 256777888999999999999999999999999999999998 566677888999999999999999998888776
Q ss_pred CceEEEEEECCC-ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeee-eec-----eeEEEEEEc
Q psy10566 369 DCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDS-WEG-----VRVNCLWCR 440 (604)
Q Consensus 369 ~~~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~-~~~-----~~v~~l~~s 440 (604)
...-..+|+..+ +.....+. .-.++.|+.....-+.|+......+||+. +..+.+ +.+ ..-++..|+
T Consensus 1165 S~PlsaLW~~~s~~~~~Hsf~-----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~Fs 1239 (1516)
T KOG1832|consen 1165 SSPLSALWDASSTGGPRHSFD-----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFS 1239 (1516)
T ss_pred cCchHHHhccccccCcccccc-----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccC
Confidence 644578999865 33333332 34678888876666677777788999994 444443 222 235788899
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
|+...++- || .+||++....+..+..-.--..-.|+|+|..++..+. |||+++.+.++....-.+ .
T Consensus 1240 P~D~LIln---dG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~Ldq----c 1305 (1516)
T KOG1832|consen 1240 PCDTLILN---DG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINSE-----IWDMRTFKLLHSVPSLDQ----C 1305 (1516)
T ss_pred CCcceEee---Cc--eeeeeccHHHHhhhhhheecccccccCCCceEEeech-----hhhhHHHHHHhcCccccc----e
Confidence 99887763 44 4799988765555543333334468999999998875 999999888776654433 1
Q ss_pred EeeeCCCCCcEEEEEeC------C-----------CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE
Q psy10566 521 HSCFGGANQDFVASGSE------D-----------GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~------d-----------g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
...| ...|+.++..-. | ...+-+|....+.+.++.+ ..+|..++-.|. ..+++.-
T Consensus 1306 ~VtF-NstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v-~R~~~Dlct~~~-D~~l~vI 1377 (1516)
T KOG1832|consen 1306 AVTF-NSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPV-DRCLLDLCTEPT-DSFLGVI 1377 (1516)
T ss_pred EEEe-ccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeec-ccchhhhhcCCc-cceEEEE
Confidence 2223 345555543320 0 1234455555666777764 346777788887 5555543
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.4e-12 Score=119.08 Aligned_cols=239 Identities=14% Similarity=0.145 Sum_probs=171.6
Q ss_pred CCCeeEEEECCCCC--eEEEEeCCCceEEEEEECCCceEEEEe-----cCCCCCCeEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 347 TLGVAYLAWSPDSS--HLLVVGPEDCHELWVWNIETELLRVKL-----NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 347 ~~~V~~l~~spd~~--~l~s~~~d~~~~i~vwd~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
...|..++|.-+++ .++.++.+. .+..+.+....+.... ......+|..++.. ...+++|-.+|.+.+|
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~--~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~ 130 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADD--DLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVR 130 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCc--ccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEE
Confidence 45677778865553 444443444 4666666555443332 11233445555443 3478888999999999
Q ss_pred EcC-----CCeeeee-eceeEEEEEEcCCCCEEE-EEeCC--CeEEEEEcCCCccccccc----------CCCCeeEEEE
Q psy10566 420 DIE-----GQVLDSW-EGVRVNCLWCRSDGKSVL-AADTH--HRIRTYNFEHLTDSNLLQ----------EDHPVMSFTI 480 (604)
Q Consensus 420 d~~-----~~~~~~~-~~~~v~~l~~s~~g~~l~-~~~~d--g~I~i~d~~~~~~~~~~~----------~~~~i~~~~~ 480 (604)
... ...+..+ .+..+..+.-++....++ +|+.. ..+.+||+...+....-. -.-.++.+.|
T Consensus 131 ~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~F 210 (412)
T KOG3881|consen 131 HDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRF 210 (412)
T ss_pred eccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeecccee
Confidence 885 3333333 334566666666555554 47877 789999998763322111 1345678888
Q ss_pred CCC--CCEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-ee
Q psy10566 481 DAT--DRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LS 556 (604)
Q Consensus 481 s~~--~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-l~ 556 (604)
-+. ...+++++.-+.+++||.+.+ +++..|..... .+.+...-|++++|++|..-|.+..||.+.++.... +.
T Consensus 211 l~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~---~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~k 287 (412)
T KOG3881|consen 211 LEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLEN---PISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLK 287 (412)
T ss_pred cCCCCCceEEEEecceeEEEecCcccCcceeEeccccC---cceeeeecCCCcEEEEecccchhheecccCceeeccccC
Confidence 887 889999999999999999875 46677765555 444455569999999999999999999999998877 88
Q ss_pred CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 557 GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 557 ~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+-.+.|+++..+|. ..++|+||-|..|||+|+.+..
T Consensus 288 g~tGsirsih~hp~-~~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 288 GITGSIRSIHCHPT-HPVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred CccCCcceEEEcCC-CceEEeeccceeEEEeecccch
Confidence 89999999999998 8999999999999999999854
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4e-11 Score=125.66 Aligned_cols=234 Identities=17% Similarity=0.148 Sum_probs=154.7
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEEec
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSWNR 402 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 402 (604)
.|.++|.+ .. ....+..+...+...+|+|||+.|+..+.++ ...|++||+.++....... ..+.+....|+|
T Consensus 180 ~l~~~d~~--g~---~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~--~~g~~~~~~~Sp 252 (430)
T PRK00178 180 TLQRSDYD--GA---RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITN--FEGLNGAPAWSP 252 (430)
T ss_pred EEEEECCC--CC---CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccC--CCCCcCCeEECC
Confidence 46666765 21 2344445677899999999999998876542 2379999999887544322 233455789999
Q ss_pred CCCEEEE-EecCC--eEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeC-CC--eEEEEEcCCCcccccccCCCC
Q psy10566 403 DGTKFVC-GGIRG--QFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADT-HH--RIRTYNFEHLTDSNLLQEDHP 474 (604)
Q Consensus 403 ~~~~l~s-~~~dg--~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~-dg--~I~i~d~~~~~~~~~~~~~~~ 474 (604)
||+.++. .+.+| .|+++|+++.....+... ......|+|||+.++..+. ++ .|+++|+.++....+......
T Consensus 253 DG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~ 332 (430)
T PRK00178 253 DGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNY 332 (430)
T ss_pred CCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCC
Confidence 9998874 44444 688889976555544433 3456789999998877664 33 577888877654443333333
Q ss_pred eeEEEECCCCCEEEEEecCC---eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC---CcEEEEeCCC
Q psy10566 475 VMSFTIDATDRLALLNVSTQ---GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED---GKVYIWHVKR 548 (604)
Q Consensus 475 i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d---g~I~iwd~~~ 548 (604)
.....|+|+++.++....++ .|.+||+.+++... +... .... ...++|+|++++..+.+ ..|++++..
T Consensus 333 ~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~-~~~~---~p~~spdg~~i~~~~~~~g~~~l~~~~~~- 406 (430)
T PRK00178 333 NARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDT-SLDE---SPSVAPNGTMLIYATRQQGRGVLMLVSIN- 406 (430)
T ss_pred ccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccCC-CCCC---CceECCCCCEEEEEEecCCceEEEEEECC-
Confidence 45678999999998876543 48899998875433 2221 1111 12457999988877654 357777775
Q ss_pred CcceEEeeCCCCCeeEEEEcCC
Q psy10566 549 ELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 549 ~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
+.....+..+.+.+...+|+|-
T Consensus 407 g~~~~~l~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 407 GRVRLPLPTAQGEVREPSWSPY 428 (430)
T ss_pred CCceEECcCCCCCcCCCccCCC
Confidence 4445566666677888888874
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-11 Score=123.91 Aligned_cols=233 Identities=17% Similarity=0.119 Sum_probs=154.3
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEEe
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 401 (604)
..|.++|.+ . .....+..+...+.+.+|+|||++|+.++..+ ...|++||+.++....... +...+.+++|+
T Consensus 170 ~~l~~~d~~--g---~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~--~~~~~~~~~~s 242 (417)
T TIGR02800 170 YELQVADYD--G---ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS--FPGMNGAPAFS 242 (417)
T ss_pred ceEEEEcCC--C---CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec--CCCCccceEEC
Confidence 356777764 1 12344455666789999999999999876542 2379999999886544332 33556778999
Q ss_pred cCCCEEEEE-ecCC--eEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCC-C--eEEEEEcCCCcccccccCCC
Q psy10566 402 RDGTKFVCG-GIRG--QFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTH-H--RIRTYNFEHLTDSNLLQEDH 473 (604)
Q Consensus 402 ~~~~~l~s~-~~dg--~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~d-g--~I~i~d~~~~~~~~~~~~~~ 473 (604)
|||+.|+.. +.++ .|++||+.+.....+..+ ......|+|+|+.++..+.. + .|+++|+.+.....+.....
T Consensus 243 pDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~ 322 (417)
T TIGR02800 243 PDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGG 322 (417)
T ss_pred CCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC
Confidence 999987654 4444 588889865544444332 23466899999988776653 3 58888887766544444556
Q ss_pred CeeEEEECCCCCEEEEEecCC---eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC---cEEEEeCC
Q psy10566 474 PVMSFTIDATDRLALLNVSTQ---GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG---KVYIWHVK 547 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg---~I~iwd~~ 547 (604)
......|+|++++++.+..++ .|.+||+.++... .+..... .....++|+|++|+..+.++ .+++.+..
T Consensus 323 ~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~----~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~ 397 (417)
T TIGR02800 323 YNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDTGL----DESPSFAPNGRMILYATTRGGRGVLGLVSTD 397 (417)
T ss_pred CccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCCCC----CCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence 677889999999999988876 7999999876432 2222111 11234578999888877654 35555543
Q ss_pred CCcceEEeeCCCCCeeEEEEc
Q psy10566 548 RELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V~~v~~s 568 (604)
++....+..+.+.+..++|+
T Consensus 398 -g~~~~~~~~~~g~~~~~~ws 417 (417)
T TIGR02800 398 -GRFRARLPLGNGDVREPAWS 417 (417)
T ss_pred -CceeeECCCCCCCcCCCCCC
Confidence 55555565555556555553
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.2e-12 Score=112.27 Aligned_cols=216 Identities=17% Similarity=0.243 Sum_probs=154.4
Q ss_pred cccccccCcCcCCCCccceeecc-cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE------------
Q psy10566 276 VSLLVDHLCTKEEFPCETTQVLN-DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT------------ 342 (604)
Q Consensus 276 ~~l~~d~~~~~~~~p~~~~~~l~-~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~------------ 342 (604)
...+|.....++ ...++ .|...|+.+.--|++ .|.+-+.|+.+.+|++.-. ....+..
T Consensus 36 ~V~~w~lqt~r~------~~~~r~~g~~~it~lq~~p~d-~l~tqgRd~~L~lw~ia~s--~~i~i~Si~~nslgFCrfS 106 (323)
T KOG0322|consen 36 IVKMWVLQTERD------LPLIRLFGRLFITNLQSIPND-SLDTQGRDPLLILWTIAYS--AFISIHSIVVNSLGFCRFS 106 (323)
T ss_pred eEEEEEeecCcc------chhhhhhccceeeceeecCCc-chhhcCCCceEEEEEccCc--ceEEEeeeeccccccccce
Confidence 445565544332 22344 467789999999874 5777889999999998621 0000000
Q ss_pred -------------e--------------------------ccCCCCeeEEEECC-CC-CeEEEEeCCCceEEEEEECCCc
Q psy10566 343 -------------L--------------------------EGHTLGVAYLAWSP-DS-SHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 343 -------------l--------------------------~~h~~~V~~l~~sp-d~-~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
. .+..+.+.|..|.- ++ ..++.+|... +.+.+||+.++
T Consensus 107 l~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEs-ghvv~wd~S~~ 185 (323)
T KOG0322|consen 107 LVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYES-GHVVIWDLSTG 185 (323)
T ss_pred eccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccC-CeEEEEEccCC
Confidence 0 01223455555422 23 3445555544 49999999998
Q ss_pred eEEEEec---------CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC---CC----eeeeeeceeEEEEEEcCCCCE
Q psy10566 382 LLRVKLN---------HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE---GQ----VLDSWEGVRVNCLWCRSDGKS 445 (604)
Q Consensus 382 ~~~~~~~---------~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~----~~~~~~~~~v~~l~~s~~g~~ 445 (604)
..+..+. ..|..+|.++.|.+.-..=++|+.+..+..|+++ +. .....+...+..+.+-||++.
T Consensus 186 ~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KI 265 (323)
T KOG0322|consen 186 DKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKI 265 (323)
T ss_pred ceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcE
Confidence 5544333 2578899999999877777888888899999884 22 122334456889999999999
Q ss_pred EEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
+++++.|++|++|+.++.....++. |...|++++|+|+...+++++.|++|.+|++
T Consensus 266 lATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 266 LATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 9999999999999999988776655 7899999999999999999999999999986
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.6e-11 Score=122.82 Aligned_cols=280 Identities=14% Similarity=0.164 Sum_probs=203.3
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCc-----------eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF-----------TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~-----------~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.....|++|+....++|+||.||.++|-.+.+.+. ....-+++.||...|.-+.|+.+.+.|-++..+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 35678999999999999999999999998863221 1233467889999999999999998888777777
Q ss_pred ceEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee--eeeeceeEEEEEEcCCCCEE
Q psy10566 370 CHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL--DSWEGVRVNCLWCRSDGKSV 446 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~v~~l~~s~~g~~l 446 (604)
.|.+|-+-.|.....+. ...++.|.+++|+.||..+.....||.|.+=.++|..+ +.+++.....+.+++|.+.+
T Consensus 94 --lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~ 171 (1189)
T KOG2041|consen 94 --LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQA 171 (1189)
T ss_pred --eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecccHHHH
Confidence 89999988776443332 34456789999999999999999999999988888766 34556667789999999999
Q ss_pred EEEeCCCeEEEEEcCCCcccc------------cccCCCCeeEEEEC--------CCCCEEEEEecCCeEEEEecCCCce
Q psy10566 447 LAADTHHRIRTYNFEHLTDSN------------LLQEDHPVMSFTID--------ATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~------------~~~~~~~i~~~~~s--------~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
+.+-.+|.+++||-...-... +......+..+.|. |+...++++..+|.+.+..-.+...
T Consensus 172 Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~ 251 (1189)
T KOG2041|consen 172 LFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPE 251 (1189)
T ss_pred HhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCC
Confidence 999999999999976531111 01113345555553 5778899999999888875544322
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCC---------CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEE
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSED---------GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d---------g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s 577 (604)
...+... ..+.-.-|+++|.+++.++.| +.|.+|. .-|+.+.+++.....|++++|-.. +-.+|.
T Consensus 252 Pvv~dtg----m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~-gLriA~ 325 (1189)
T KOG2041|consen 252 PVVVDTG----MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGT-GLRIAI 325 (1189)
T ss_pred CeEEecc----cEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCCceeeeeEEcCC-ceEEEE
Confidence 2222211 233445667999999998865 3566665 347888889888889999999866 444444
Q ss_pred EeCCCcEEEECC
Q psy10566 578 VSDDCTVRIWGP 589 (604)
Q Consensus 578 ~s~Dg~I~iW~~ 589 (604)
+ .|+.|.+=++
T Consensus 326 A-vdsfiyfanI 336 (1189)
T KOG2041|consen 326 A-VDSFIYFANI 336 (1189)
T ss_pred E-ecceEEEEee
Confidence 3 2455544333
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.1e-11 Score=112.60 Aligned_cols=250 Identities=15% Similarity=0.155 Sum_probs=170.5
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
+.....+.++||.+.|+....-|...-+++.+.|.+++||--.+.......+ ......+++++.+.++...|+++-..
T Consensus 12 ~kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI--~~~mP~~~~~~~y~~e~~~L~vg~~n 89 (404)
T KOG1409|consen 12 KKPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSI--YHYMPSPCSAMEYVSESRRLYVGQDN 89 (404)
T ss_pred cchhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchh--hhhCCCCceEeeeeccceEEEEEEec
Confidence 4456678899999999999999988889999999999999754222122111 11235789999999999888887777
Q ss_pred CceEEEEEECCCc---eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece-eEEEEEEcCCC
Q psy10566 369 DCHELWVWNIETE---LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RVNCLWCRSDG 443 (604)
Q Consensus 369 ~~~~i~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g 443 (604)
+ ++.-+.+... -...+....|...+..+-|+-....+++.+.|..+.-.-. .+..+..+.-. ...++.+.-.
T Consensus 90 g--tvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~- 166 (404)
T KOG1409|consen 90 G--TVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL- 166 (404)
T ss_pred c--eEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE-
Confidence 6 7777765432 1222233468889999999999999999999887654433 23322211100 0111111111
Q ss_pred CEEEEEeCCCeEEEEEcCCC---cccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce-eeEeeccccceEE
Q psy10566 444 KSVLAADTHHRIRTYNFEHL---TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL-LRKFQGVTQGQFT 519 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~-~~~~~~~~~~~~~ 519 (604)
+...|...|.|.+..+... .......+...+.+++|.+....+.+|..|..+.+||+-..+- .....+|...+..
T Consensus 167 -~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~ 245 (404)
T KOG1409|consen 167 -YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQA 245 (404)
T ss_pred -EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhh
Confidence 4556666666665555433 2334445788999999999999999999999999999975543 3455666664433
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
+ ..-+--+.++++++||.|.+|+++
T Consensus 246 l---~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 246 L---SYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred h---hhhhhheeeeeccCCCeEEEEecc
Confidence 3 333455688999999999999986
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.4e-11 Score=116.92 Aligned_cols=276 Identities=17% Similarity=0.280 Sum_probs=172.0
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---------ceEE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---------CHEL 373 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---------~~~i 373 (604)
.-+.+.|||-|.||+|-..-| |.+|--. ....++.+. |. .|..+.|||+.+||++-+..- ...+
T Consensus 212 Tetyv~wSP~GTYL~t~Hk~G-I~lWGG~----~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l 284 (698)
T KOG2314|consen 212 TETYVRWSPKGTYLVTFHKQG-IALWGGE----SFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQL 284 (698)
T ss_pred eeeeEEecCCceEEEEEeccc-eeeecCc----cHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceE
Confidence 356789999999999988766 8899754 444455554 55 489999999999999976421 1379
Q ss_pred EEEECCCceEEEEecC--CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee---eeeceeEEEEEE---------
Q psy10566 374 WVWNIETELLRVKLNH--SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD---SWEGVRVNCLWC--------- 439 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~v~~l~~--------- 439 (604)
+|||+.+|.....+.. .....-.-..||.|++++|.-.. ..|.+|+...-.+. .+.-..|....|
T Consensus 285 ~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAY 363 (698)
T KOG2314|consen 285 IIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAY 363 (698)
T ss_pred EEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEE
Confidence 9999999998777763 22222335689999999988766 45677765321110 000112222333
Q ss_pred --------------------------------------cCCCCEEEEEeC-------C---CeEEEEEcCCCc-cccccc
Q psy10566 440 --------------------------------------RSDGKSVLAADT-------H---HRIRTYNFEHLT-DSNLLQ 470 (604)
Q Consensus 440 --------------------------------------s~~g~~l~~~~~-------d---g~I~i~d~~~~~-~~~~~~ 470 (604)
-.+|.+|..--. . ..+.|+.++... ......
T Consensus 364 wtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve 443 (698)
T KOG2314|consen 364 WTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE 443 (698)
T ss_pred EcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeee
Confidence 334444332211 0 123333333322 122233
Q ss_pred CCCCeeEEEECCCCCEEEEEec---CCeEEEEecCC-C---ceeeEeeccccceEEEEeeeCCCCCcEEEEE---eCCCc
Q psy10566 471 EDHPVMSFTIDATDRLALLNVS---TQGVHLWDLRD-R---ILLRKFQGVTQGQFTIHSCFGGANQDFVASG---SEDGK 540 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~~-~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg---s~dg~ 540 (604)
....|..++|.|.|+.+++-+. ..++.+|.+.+ . +.+..+.. .....++++|.|++++.+ |..|.
T Consensus 444 lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk-----~~~N~vfwsPkG~fvvva~l~s~~g~ 518 (698)
T KOG2314|consen 444 LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK-----KFANTVFWSPKGRFVVVAALVSRRGD 518 (698)
T ss_pred cchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-----cccceEEEcCCCcEEEEEEecccccc
Confidence 4667889999999987766544 35688888873 2 22333332 133457788999999876 45789
Q ss_pred EEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC------CCcEEEECCCCC
Q psy10566 541 VYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD------DCTVRIWGPHLN 592 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~------Dg~I~iW~~~~~ 592 (604)
+.++|+....+..+-.......+.+.|.|. |++++|++. |.--+||+....
T Consensus 519 l~F~D~~~a~~k~~~~~eh~~at~veWDPt-GRYvvT~ss~wrhk~d~GYri~tfqGr 575 (698)
T KOG2314|consen 519 LEFYDTDYADLKDTASPEHFAATEVEWDPT-GRYVVTSSSSWRHKVDNGYRIFTFQGR 575 (698)
T ss_pred eEEEecchhhhhhccCccccccccceECCC-CCEEEEeeehhhhccccceEEEEeecH
Confidence 999998853332222222234688999999 899999876 344677776543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=9e-11 Score=124.33 Aligned_cols=148 Identities=13% Similarity=0.206 Sum_probs=130.8
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
+-++++.-++++|+.-+.|.+|+.. .-.....+.+|.+.|.++.|+-||.++++++.|. ++++|++++.+....
T Consensus 139 ~g~s~~~~~i~~gsv~~~iivW~~~----~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDR--siRlW~i~s~~~~~~ 212 (967)
T KOG0974|consen 139 IGDSAEELYIASGSVFGEIIVWKPH----EDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDR--SIRLWPIDSREVLGC 212 (967)
T ss_pred EeccCcEEEEEeccccccEEEEecc----ccCCcceecccCCceEEEEEccCCcEEEEEecCc--ceeeeecccccccCc
Confidence 4567777799999999999999987 1122237899999999999999999999999998 899999999987775
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC
Q psy10566 387 LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTHHRIRTYNFEH 462 (604)
Q Consensus 387 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~ 462 (604)
...+|...|..+.|.|+ .+++++.|-+.++|+.++..+..+.+| .+..++..++....++++.|+.+++||+..
T Consensus 213 ~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 213 TGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred ccccccceeEEEEeccc--eeEEeccceEEEEEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 66689999999999998 999999999999999999888888877 588889999999999999999999999744
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-10 Score=121.28 Aligned_cols=199 Identities=21% Similarity=0.223 Sum_probs=138.0
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEE-eCCC
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV-GPED 369 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~-~~d~ 369 (604)
.+.+..+...+.+.+|+|||++||.++.+ ..|++||+. ++... .+..+...+.+++|+|||+.|+.. +.++
T Consensus 182 ~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~--~g~~~---~~~~~~~~~~~~~~spDg~~l~~~~~~~~ 256 (417)
T TIGR02800 182 PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLA--TGQRE---KVASFPGMNGAPAFSPDGSKLAVSLSKDG 256 (417)
T ss_pred CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECC--CCCEE---EeecCCCCccceEECCCCCEEEEEECCCC
Confidence 45566677789999999999999987654 479999987 22222 223345567779999999987754 4444
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C--eEEEEEcCCCeeeeee--ceeEEEEEEcCCCC
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G--QFYQCDIEGQVLDSWE--GVRVNCLWCRSDGK 444 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~--~~~v~~l~~s~~g~ 444 (604)
...|++||+.++....... +........|+|+|+.++..+.. + .|+++|+.+.....+. +.......++|+|+
T Consensus 257 ~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~ 334 (417)
T TIGR02800 257 NPDIYVMDLDGKQLTRLTN--GPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGD 334 (417)
T ss_pred CccEEEEECCCCCEEECCC--CCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCC
Confidence 3479999998876543332 33345577899999988876653 3 6788888654433332 33566789999999
Q ss_pred EEEEEeCCC---eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC---eEEEEe
Q psy10566 445 SVLAADTHH---RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ---GVHLWD 500 (604)
Q Consensus 445 ~l~~~~~dg---~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~I~lwd 500 (604)
.++.++.++ .|.+||+.+.....+.. ........|+|+++.++..+.++ .+++.+
T Consensus 335 ~i~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~ 395 (417)
T TIGR02800 335 LIAFVHREGGGFNIAVMDLDGGGERVLTD-TGLDESPSFAPNGRMILYATTRGGRGVLGLVS 395 (417)
T ss_pred EEEEEEccCCceEEEEEeCCCCCeEEccC-CCCCCCceECCCCCEEEEEEeCCCcEEEEEEE
Confidence 999988776 79999988754433322 22345568999999988887754 344444
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.5e-11 Score=119.32 Aligned_cols=194 Identities=17% Similarity=0.257 Sum_probs=129.9
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec--cCCCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEEEEe
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE--GHTLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKL 387 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~--~h~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~ 387 (604)
|.|--|..|-..|.|.+.|... .+...+.... -....|+|+.|-|.++.++.++. ++ .+++||...
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~--~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sG--nlyly~~~~------- 251 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPIN--FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASG--NLYLYDKEI------- 251 (636)
T ss_pred CCCcceEEeeccCceEEecchh--hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecC--ceEEeeccc-------
Confidence 4555667777788888887651 1111111111 12478999999997765555444 44 789988721
Q ss_pred cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc
Q psy10566 388 NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465 (604)
Q Consensus 388 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~ 465 (604)
..+ ..-.+....+++..|......+.. ....+..|. ...|+.++|+|||++|++.+.||.++|||+.+.+.
T Consensus 252 ~~~--~t~p~~~~~k~~~~f~i~t~ksk~-----~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eL 324 (636)
T KOG2394|consen 252 VCG--ATAPSYQALKDGDQFAILTSKSKK-----TRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQEL 324 (636)
T ss_pred ccc--CCCCcccccCCCCeeEEeeeeccc-----cCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHH
Confidence 101 011112223455555543321110 112222222 22788999999999999999999999999998776
Q ss_pred ccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 466 SNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 466 ~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
..... .-+...|++|+|||++|++|+.|.-|.||.+..++.+..=++|+..+..+.+
T Consensus 325 lg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaF 382 (636)
T KOG2394|consen 325 LGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAF 382 (636)
T ss_pred HHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEee
Confidence 65544 3577899999999999999999999999999999999999999887666543
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.2e-12 Score=121.38 Aligned_cols=253 Identities=16% Similarity=0.214 Sum_probs=188.1
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCe
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQ 415 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~ 415 (604)
.....|..|.+.|..+.|...|..+++++.|. .|.+||...+.....+..+|...|....|.| +...+++++.||.
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~--~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgq 210 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDL--QVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQ 210 (559)
T ss_pred hhhhcccCCCCccceeeecccCceeeccCccc--eEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCc
Confidence 34567888999999999999999999999998 8999999999999999999999999999998 4568999999999
Q ss_pred EEEEEc--CCCee--eeeece--eEEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCccccccc----CCC---CeeEEEEC
Q psy10566 416 FYQCDI--EGQVL--DSWEGV--RVNCLWCRSDG-KSVLAADTHHRIRTYNFEHLTDSNLLQ----EDH---PVMSFTID 481 (604)
Q Consensus 416 i~iwd~--~~~~~--~~~~~~--~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~~~~----~~~---~i~~~~~s 481 (604)
+++=.+ .+... +....| +|..++.-|+. ..+.+++.|+.+.-+|++.......+. ... ....++.+
T Consensus 211 vr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~ 290 (559)
T KOG1334|consen 211 VRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVD 290 (559)
T ss_pred eeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecC
Confidence 998876 23222 122222 68888888864 568899999999999998764433221 122 46788888
Q ss_pred CCCC-EEEEEecCCeEEEEecCCCc------eeeEeeccc---cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC--C
Q psy10566 482 ATDR-LALLNVSTQGVHLWDLRDRI------LLRKFQGVT---QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR--E 549 (604)
Q Consensus 482 ~~~~-~l~~~~~dg~I~lwd~~~~~------~~~~~~~~~---~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~--~ 549 (604)
|... .+++++.|..+++||.+.-. .+.++..+. .....|.++.++.++.-+.+.-.|-.|+++.... |
T Consensus 291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG 370 (559)
T ss_pred CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccC
Confidence 8765 78999999999999987522 223333221 2233566677776665565666777899996542 2
Q ss_pred ----------cceEE-eeCCC--CCeeEEEE-cCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 550 ----------LPIAT-LSGHT--RTVSCVAW-NPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 550 ----------~~~~~-l~~h~--~~V~~v~~-sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..+.. ++||. ..|.++-| -|. ..+++|||+=|.|.||+-++++
T Consensus 371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPr-sEyVvSGSDCGhIFiW~K~t~e 427 (559)
T KOG1334|consen 371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPR-SEYVVSGSDCGHIFIWDKKTGE 427 (559)
T ss_pred CCCCCCcchhhccchhhcccccccccceeeeccCc-cceEEecCccceEEEEecchhH
Confidence 22233 78885 35777765 565 7899999999999999998775
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-10 Score=120.52 Aligned_cols=209 Identities=20% Similarity=0.221 Sum_probs=135.4
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECC-C--eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEE-eCCCc
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKD-T--TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV-GPEDC 370 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~d-g--~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~-~~d~~ 370 (604)
+.+..+...+.+..|||||+.|+..+.+ + .|.+||+. ++....+..+. ......+|+|||+.|+.. +.++.
T Consensus 211 ~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~--tg~~~~lt~~~---g~~~~~~wSPDG~~La~~~~~~g~ 285 (448)
T PRK04792 211 QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIY--TQVREKVTSFP---GINGAPRFSPDGKKLALVLSKDGQ 285 (448)
T ss_pred eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECC--CCCeEEecCCC---CCcCCeeECCCCCEEEEEEeCCCC
Confidence 4455567788999999999988876543 3 57788876 33333333333 234578999999988764 44554
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCeeeee--eceeEEEEEEcCCCCE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RG--QFYQCDIEGQVLDSW--EGVRVNCLWCRSDGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~--~~~~v~~l~~s~~g~~ 445 (604)
..|+++|+.+++...... +.......+|+|||+.++..+. ++ .|+++|+++.....+ .+.......|+|||+.
T Consensus 286 ~~Iy~~dl~tg~~~~lt~--~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~ 363 (448)
T PRK04792 286 PEIYVVDIATKALTRITR--HRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRS 363 (448)
T ss_pred eEEEEEECCCCCeEECcc--CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCE
Confidence 469999998887544332 3345677899999998877654 33 566677754333332 3334445789999999
Q ss_pred EEEEeCC-C--eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC---eEEEEecCCCceeeEeec
Q psy10566 446 VLAADTH-H--RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ---GVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 446 l~~~~~d-g--~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~~ 512 (604)
++..+.+ + .|.++|+.++....+... .......|+|+|+.++....++ .+++++. ++.....+..
T Consensus 364 l~~~~~~~g~~~I~~~dl~~g~~~~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~ 434 (448)
T PRK04792 364 MIMVNRTNGKFNIARQDLETGAMQVLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPA 434 (448)
T ss_pred EEEEEecCCceEEEEEECCCCCeEEccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcC
Confidence 8877653 3 466678777654333222 2223458999999988766543 3677776 4445554543
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.7e-09 Score=99.54 Aligned_cols=271 Identities=11% Similarity=0.135 Sum_probs=180.4
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEEC---CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSK---DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~---dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
+-.+.+.++.++|+|+++.|.++.. +|.|.-|.++..++....+........+.+.+++++++++++++.... +.|
T Consensus 35 ~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~-g~v 113 (346)
T COG2706 35 LVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHS-GSV 113 (346)
T ss_pred hccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccC-ceE
Confidence 3456788999999999999888854 477989998865566555555544445568999999999999998876 699
Q ss_pred EEEECCC-ceEEEEec-CCCCCC----------eEEEEEecCCCEEEEEecC-CeEEEEEcC-CCeee-----eeeceeE
Q psy10566 374 WVWNIET-ELLRVKLN-HSPEDS----------LTSCSWNRDGTKFVCGGIR-GQFYQCDIE-GQVLD-----SWEGVRV 434 (604)
Q Consensus 374 ~vwd~~~-~~~~~~~~-~~~~~~----------v~~~~~~~~~~~l~s~~~d-g~i~iwd~~-~~~~~-----~~~~~~v 434 (604)
.++-++. |....... ..|.+. +....+.|+++++++..-. ..|.+|+++ |+... .-.+...
T Consensus 114 ~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GP 193 (346)
T COG2706 114 SVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGP 193 (346)
T ss_pred EEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCc
Confidence 9999865 43221110 112222 8889999999999887653 478999985 33221 1223467
Q ss_pred EEEEEcCCCCEEEEEeC-CCeEEEEEcCCC--ccccc---------ccCCCCeeEEEECCCCCEEEEEec-CCeEEEEec
Q psy10566 435 NCLWCRSDGKSVLAADT-HHRIRTYNFEHL--TDSNL---------LQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDL 501 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~--~~~~~---------~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~ 501 (604)
+.+.|+|++++....+. +++|.+|..... +...+ +........+.++++|++|.++.. ...|.+|.+
T Consensus 194 RHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V 273 (346)
T COG2706 194 RHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSV 273 (346)
T ss_pred ceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEE
Confidence 89999999998776654 789999998773 21111 223566788999999999998866 346888877
Q ss_pred CCC-ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-CcEEEEeCC--CCcceEEee-CCCCCeeEEEEc
Q psy10566 502 RDR-ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-GKVYIWHVK--RELPIATLS-GHTRTVSCVAWN 568 (604)
Q Consensus 502 ~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-g~I~iwd~~--~~~~~~~l~-~h~~~V~~v~~s 568 (604)
... ..+............-+...+.+.|++|+++..+ ..|.+|.++ +|++-.... .......||.|.
T Consensus 274 ~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 274 DPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred cCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 543 2222222211111122333446889999888875 468888665 555433332 234455677664
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.5e-10 Score=118.62 Aligned_cols=202 Identities=17% Similarity=0.229 Sum_probs=135.7
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEE-eCCC
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV-GPED 369 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~-~~d~ 369 (604)
.+.+..|...+...+|||||+.|+..+.+ ..|.+|++. ++..+.+.. ..+.+...+|+|||+.|+.. ..++
T Consensus 191 ~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~--~g~~~~l~~---~~g~~~~~~~SpDG~~la~~~~~~g 265 (430)
T PRK00178 191 AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLD--TGRREQITN---FEGLNGAPAWSPDGSKLAFVLSKDG 265 (430)
T ss_pred ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECC--CCCEEEccC---CCCCcCCeEECCCCCEEEEEEccCC
Confidence 45566677889999999999999877644 368888987 333333322 33345578999999988754 4444
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCeeeee--eceeEEEEEEcCCCC
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RG--QFYQCDIEGQVLDSW--EGVRVNCLWCRSDGK 444 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~--~~~~v~~l~~s~~g~ 444 (604)
...|++||+.++..... . .+........|+|||+.++..+. +| .|+++|+.+.....+ .+.......|+|+|+
T Consensus 266 ~~~Iy~~d~~~~~~~~l-t-~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~ 343 (430)
T PRK00178 266 NPEIYVMDLASRQLSRV-T-NHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGK 343 (430)
T ss_pred CceEEEEECCCCCeEEc-c-cCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCC
Confidence 44799999998875443 2 23344667899999998877664 33 577778754333332 222344568999999
Q ss_pred EEEEEeCCC---eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecCC
Q psy10566 445 SVLAADTHH---RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRD 503 (604)
Q Consensus 445 ~l~~~~~dg---~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~ 503 (604)
.++..+.++ .|.+||+.++....+.. ........|+|+|+.++..+.+ ..++++++..
T Consensus 344 ~i~~~~~~~~~~~l~~~dl~tg~~~~lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g 407 (430)
T PRK00178 344 TLVMVHRQDGNFHVAAQDLQRGSVRILTD-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSING 407 (430)
T ss_pred EEEEEEccCCceEEEEEECCCCCEEEccC-CCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 988876543 58889988765443332 2233456899999999887754 2466777643
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.3e-11 Score=126.04 Aligned_cols=194 Identities=14% Similarity=0.188 Sum_probs=153.6
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-eeeeeece------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ-VLDSWEGV------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~ 465 (604)
..+....+.-+.+.++.++.+..+.+||.... ........ ...-+.++++.-++++|+.-+.|.+|+......
T Consensus 88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~ 167 (967)
T KOG0974|consen 88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNK 167 (967)
T ss_pred ccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCC
Confidence 44555666678889999999999999999543 33332221 233345667777899999999999999875433
Q ss_pred c-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee-EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 466 S-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR-KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 466 ~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
. ....|.+.|.++.++-+|+++++.+.|.++++|++.+.+... ..-+|+..+..+ ++ .++ .++++++|.+.++
T Consensus 168 p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~--~~-~~n--~i~t~gedctcrv 242 (967)
T KOG0974|consen 168 PIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWAC--CF-LPN--RIITVGEDCTCRV 242 (967)
T ss_pred cceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEE--Ee-ccc--eeEEeccceEEEE
Confidence 3 467899999999999999999999999999999999988776 566787765543 43 355 8999999999999
Q ss_pred EeCCCCcceEEeeCCC-CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 544 WHVKRELPIATLSGHT-RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 544 wd~~~~~~~~~l~~h~-~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|+.+ ++.+.++.+|. ..|..++..+. ...++|++.||.+++|++....
T Consensus 243 W~~~-~~~l~~y~~h~g~~iw~~~~~~~-~~~~vT~g~Ds~lk~~~l~~r~ 291 (967)
T KOG0974|consen 243 WGVN-GTQLEVYDEHSGKGIWKIAVPIG-VIIKVTGGNDSTLKLWDLNGRG 291 (967)
T ss_pred Eecc-cceehhhhhhhhcceeEEEEcCC-ceEEEeeccCcchhhhhhhccc
Confidence 9755 55566888884 67999999998 8899999999999999997653
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.9e-11 Score=109.92 Aligned_cols=258 Identities=15% Similarity=0.241 Sum_probs=189.6
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC-CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI-ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
+......++||.+.|+....-|...-+++++.|. ++++|-- +.++.-..+.+....+++++.+.++...|++|-..|
T Consensus 13 kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~dr--tvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ng 90 (404)
T KOG1409|consen 13 KPELLSKIEGSQDDVNAAILIPKEEGVISVSEDR--TVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNG 90 (404)
T ss_pred chhhhhhhcCchhhhhhheeccCCCCeEEccccc--eeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecc
Confidence 3445677889999999999999999999999998 8999954 455655555555668899999999999999999999
Q ss_pred eEEEEEcC-----CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEE
Q psy10566 415 QFYQCDIE-----GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA 487 (604)
Q Consensus 415 ~i~iwd~~-----~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l 487 (604)
++.-+.+. ...++.+..| ++..+.|+-...++++.+.|..+.---.+.+....-.....+.+...+.-. +.
T Consensus 91 tvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~ 168 (404)
T KOG1409|consen 91 TVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL--YA 168 (404)
T ss_pred eEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE--EE
Confidence 99998773 2333444444 788899999999999999887765444444332221111111111222111 55
Q ss_pred EEEecCCeEEEEec--CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc-ceEEeeCCCCCeeE
Q psy10566 488 LLNVSTQGVHLWDL--RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL-PIATLSGHTRTVSC 564 (604)
Q Consensus 488 ~~~~~dg~I~lwd~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~-~~~~l~~h~~~V~~ 564 (604)
.+|...|.|.+-.+ ..-.++.++.+|.. .+.+..|.+....+++|..|..|.+||+.-.+ ....+.+|.+.|..
T Consensus 169 fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~---~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~ 245 (404)
T KOG1409|consen 169 FVGDHSGQITMLKLEQNGCQLITTFNGHTG---EVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQA 245 (404)
T ss_pred EecccccceEEEEEeecCCceEEEEcCccc---ceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhh
Confidence 55666666555443 34456777888877 55666777888999999999999999997543 34577899999999
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEECCCCCCCCCccccC
Q psy10566 565 VAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLAS 601 (604)
Q Consensus 565 v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~~~~~~~ 601 (604)
+..-+. -..+.+++.||.|-+|+.+..+..+|....
T Consensus 246 l~~~~~-t~~l~S~~edg~i~~w~mn~~r~etpewl~ 281 (404)
T KOG1409|consen 246 LSYAQH-TRQLISCGEDGGIVVWNMNVKRVETPEWLD 281 (404)
T ss_pred hhhhhh-heeeeeccCCCeEEEEeccceeecCccccc
Confidence 998887 789999999999999999988877765543
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.1e-09 Score=101.62 Aligned_cols=257 Identities=10% Similarity=0.063 Sum_probs=157.6
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC---------CCceEEEEEECCCceEEEEecCCCC-
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP---------EDCHELWVWNIETELLRVKLNHSPE- 392 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~---------d~~~~i~vwd~~~~~~~~~~~~~~~- 392 (604)
++|.+.|.. +.+.+..+..-..+- .+ +|||++.+.++.. +. ..|.+||..+.+.+..+..+..
T Consensus 27 ~~v~ViD~~----~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~-d~V~v~D~~t~~~~~~i~~p~~p 99 (352)
T TIGR02658 27 TQVYTIDGE----AGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRT-DYVEVIDPQTHLPIADIELPEGP 99 (352)
T ss_pred ceEEEEECC----CCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCC-CEEEEEECccCcEEeEEccCCCc
Confidence 889999988 556666666433332 34 9999999988877 43 3899999999999888774322
Q ss_pred -----CCeEEEEEecCCCEEEEEe-c-CCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc
Q psy10566 393 -----DSLTSCSWNRDGTKFVCGG-I-RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 393 -----~~v~~~~~~~~~~~l~s~~-~-dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~ 464 (604)
.....++++|||+++++.. . +..|.+.|+. ++.+....-.....+...++...+ +-+.||......+....
T Consensus 100 ~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~-~~~~Dg~~~~v~~d~~g 178 (352)
T TIGR02658 100 RFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFF-MHCRDGSLAKVGYGTKG 178 (352)
T ss_pred hhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccE-EEeecCceEEEEecCCC
Confidence 1234789999999999876 3 6899999995 555555543111111111111111 11233333222221110
Q ss_pred c-----cccccC------CCCeeEEEECC-CCCEEEEEecCCeEEEEecCCC-----ceeeEeecccc----ceEEEEee
Q psy10566 465 D-----SNLLQE------DHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDR-----ILLRKFQGVTQ----GQFTIHSC 523 (604)
Q Consensus 465 ~-----~~~~~~------~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~-----~~~~~~~~~~~----~~~~i~~~ 523 (604)
. ...+.. ..+ .+.+ +++++.+... |.|.+.|+... .....+..... .......+
T Consensus 179 ~~~~~~~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~i 253 (352)
T TIGR02658 179 NPKIKPTEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQV 253 (352)
T ss_pred ceEEeeeeeecCCccccccCC----ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeE
Confidence 0 001000 112 3345 8888888777 99999996443 23332221100 00111124
Q ss_pred eCCCCCcEEEEEe----------CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEE-EEeCCCcEEEECCCCC
Q psy10566 524 FGGANQDFVASGS----------EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA-SVSDDCTVRIWGPHLN 592 (604)
Q Consensus 524 ~~~~~~~~l~sgs----------~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~-s~s~Dg~I~iW~~~~~ 592 (604)
.++++++.++... ..+.|.++|..+++.+..+.. ...+..++++||+..+|+ +...++.|.+.|..++
T Consensus 254 a~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 254 AYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred EEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence 5568888777743 125799999999999998874 357899999999542555 4447899999999887
Q ss_pred C
Q psy10566 593 T 593 (604)
Q Consensus 593 ~ 593 (604)
+
T Consensus 333 k 333 (352)
T TIGR02658 333 K 333 (352)
T ss_pred e
Confidence 5
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-11 Score=136.60 Aligned_cols=221 Identities=16% Similarity=0.203 Sum_probs=173.2
Q ss_pred ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q psy10566 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423 (604)
Q Consensus 344 ~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 423 (604)
+.+-..|.++.-+|...+.++|+.|| .|++|....+..+..+.......|+.+.|+.+|+.+..+..||.+.+|....
T Consensus 2205 k~~v~~v~r~~sHp~~~~Yltgs~dg--sv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTGSQDG--SVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred ecccCceeeecCCCCCceEEecCCCc--eEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCC
Confidence 33567788999999999999999999 8999999999888888766668999999999999999999999999999998
Q ss_pred Ceeeeeece--eEEEEEEcCCCCEEEEE---eCCCeEEEEEcCCCccccc--ccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 424 QVLDSWEGV--RVNCLWCRSDGKSVLAA---DTHHRIRTYNFEHLTDSNL--LQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 424 ~~~~~~~~~--~v~~l~~s~~g~~l~~~---~~dg~I~i~d~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
+....+..| ...++.|-. ..++++ +.++.+.+||......... ..|.+.++++++.|....+++|+.+|.|
T Consensus 2283 k~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v 2360 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEV 2360 (2439)
T ss_pred cceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcE
Confidence 888888776 345555554 334444 3467899999765433322 4578999999999999999999999999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC-C--CC--Ce--eEEEEcC
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG-H--TR--TV--SCVAWNP 569 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h--~~--~V--~~v~~sp 569 (604)
++||++..+.+++++. .. ...++++|+..|.|+||++.....+.++.. | .+ .+ ..+-..+
T Consensus 2361 ~l~D~rqrql~h~~~~------------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~ 2427 (2439)
T KOG1064|consen 2361 CLFDIRQRQLRHTFQA------------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQ 2427 (2439)
T ss_pred EEeehHHHHHHHHhhh------------hh-hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeeecc
Confidence 9999999888877764 12 456899999999999999998877777653 2 11 11 1222222
Q ss_pred CCCcEEEEEeCCCc
Q psy10566 570 VYHQMIASVSDDCT 583 (604)
Q Consensus 570 ~~~~~l~s~s~Dg~ 583 (604)
.+.|.+|+.||+
T Consensus 2428 --~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2428 --CNRIFSCGADGT 2439 (2439)
T ss_pred --CceEEEecCCCC
Confidence 456788888874
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-08 Score=96.64 Aligned_cols=270 Identities=13% Similarity=0.166 Sum_probs=178.4
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECC--CceEEEEecC-CCCCCeEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIE--TELLRVKLNH-SPEDSLTS 397 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~--~~~~~~~~~~-~~~~~v~~ 397 (604)
+.-|.+|+++..+++....... .+...++-++|+|+.+.|.++..++ .+.|-.|.++ +|.....-.. ....+.+.
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v-~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~y 93 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLV-AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCY 93 (346)
T ss_pred CCceEEEEEeCcccccchhhhc-cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeE
Confidence 4569999998555554443333 3667789999999999999887762 2345555554 4654332221 22334488
Q ss_pred EEEecCCCEEEEEecC-CeEEEEEcC--CCeeee---eec-----------eeEEEEEEcCCCCEEEEEeCC-CeEEEEE
Q psy10566 398 CSWNRDGTKFVCGGIR-GQFYQCDIE--GQVLDS---WEG-----------VRVNCLWCRSDGKSVLAADTH-HRIRTYN 459 (604)
Q Consensus 398 ~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~~~~---~~~-----------~~v~~l~~s~~g~~l~~~~~d-g~I~i~d 459 (604)
++++++|++++++... |.|.++-+. |..... ... ..+....+.|+++++++.+-. .+|.+|+
T Consensus 94 vsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~ 173 (346)
T COG2706 94 VSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYD 173 (346)
T ss_pred EEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEE
Confidence 9999999999998765 688998872 332211 110 127788999999999888754 4799999
Q ss_pred cCCCcccc----cccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCC-ceeeEeecc------ccceEEEEeeeCCC
Q psy10566 460 FEHLTDSN----LLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDR-ILLRKFQGV------TQGQFTIHSCFGGA 527 (604)
Q Consensus 460 ~~~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~-~~~~~~~~~------~~~~~~i~~~~~~~ 527 (604)
+..+.... .+........+.|+|++++..+.++ +++|.+|..... ..+..++.+ -........+..++
T Consensus 174 ~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~ 253 (346)
T COG2706 174 LDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISP 253 (346)
T ss_pred cccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECC
Confidence 98654332 2345677889999999999887776 889999998773 222222211 11222344455679
Q ss_pred CCcEEEEEeC-CCcEEEEeCCC--Ccc--eEEeeCCCCCeeEEEEcCCCCcEEEEEeC-CCcEEEECCCCCC
Q psy10566 528 NQDFVASGSE-DGKVYIWHVKR--ELP--IATLSGHTRTVSCVAWNPVYHQMIASVSD-DCTVRIWGPHLNT 593 (604)
Q Consensus 528 ~~~~l~sgs~-dg~I~iwd~~~--~~~--~~~l~~h~~~V~~v~~sp~~~~~l~s~s~-Dg~I~iW~~~~~~ 593 (604)
+|++|.++.. ...|.+|.+.. +++ +.....+........|+|. +.+|+.+.. +..|.++..+...
T Consensus 254 dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~-g~~Liaa~q~sd~i~vf~~d~~T 324 (346)
T COG2706 254 DGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPS-GRFLIAANQKSDNITVFERDKET 324 (346)
T ss_pred CCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCC-CCEEEEEccCCCcEEEEEEcCCC
Confidence 9999988754 34788887763 332 1222334455789999999 566655554 4679998776544
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-09 Score=112.69 Aligned_cols=235 Identities=9% Similarity=0.018 Sum_probs=145.1
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEE---EEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEE
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL---VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW 400 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~---s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 400 (604)
.|.+.|.+ ... ...+......+.+-+|||||+.++ +...++...|++.++.+++...... ..+.....+|
T Consensus 166 ~l~~~d~d--G~~---~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~--~~g~~~~p~w 238 (428)
T PRK01029 166 ELWSVDYD--GQN---LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILA--LQGNQLMPTF 238 (428)
T ss_pred eEEEEcCC--CCC---ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeec--CCCCccceEE
Confidence 45566654 222 233444555667889999997532 3444444579999999886544332 2344557899
Q ss_pred ecCCCEEEEEec-CC----eEEEEEcCC----Ceeeeeece--eEEEEEEcCCCCEEEEEe-CCCe--EEEEEcCC--Cc
Q psy10566 401 NRDGTKFVCGGI-RG----QFYQCDIEG----QVLDSWEGV--RVNCLWCRSDGKSVLAAD-THHR--IRTYNFEH--LT 464 (604)
Q Consensus 401 ~~~~~~l~s~~~-dg----~i~iwd~~~----~~~~~~~~~--~v~~l~~s~~g~~l~~~~-~dg~--I~i~d~~~--~~ 464 (604)
+|||+.|+..+. +| .+..|++.. .......+. ......|+|||+.++..+ .+|. |.++++.. ..
T Consensus 239 SPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~ 318 (428)
T PRK01029 239 SPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQS 318 (428)
T ss_pred CCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccc
Confidence 999998887653 22 334466642 222222222 245679999999887765 4564 44445432 22
Q ss_pred ccccccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC---C
Q psy10566 465 DSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE---D 538 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~---d 538 (604)
...+......+....|+|||+.++....+ ..|.+||+.+++......+ .. ......++|||++|+..+. .
T Consensus 319 ~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~-~~---~~~~p~wSpDG~~L~f~~~~~g~ 394 (428)
T PRK01029 319 PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS-PE---NKESPSWAIDSLHLVYSAGNSNE 394 (428)
T ss_pred eEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC-CC---CccceEECCCCCEEEEEECCCCC
Confidence 22232334566788999999998877653 3699999988866443322 11 1223455799998875443 3
Q ss_pred CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 539 GKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 539 g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
+.|++||+..++..... ...+.+...+|+|.
T Consensus 395 ~~L~~vdl~~g~~~~Lt-~~~g~~~~p~Ws~~ 425 (428)
T PRK01029 395 SELYLISLITKKTRKIV-IGSGEKRFPSWGAF 425 (428)
T ss_pred ceEEEEECCCCCEEEee-cCCCcccCceecCC
Confidence 57999999877654433 34556778899885
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=3e-09 Score=104.49 Aligned_cols=275 Identities=19% Similarity=0.220 Sum_probs=187.0
Q ss_pred CcEEEEEEcCCCCeEEEEECCC---------------eEEEEEeCCCCceeEeeEEeccCCCC--ee-EEEECCCCCeEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDT---------------TVIIWDVDPVTFTCQHRKTLEGHTLG--VA-YLAWSPDSSHLL 363 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg---------------~i~iwd~~~~~~~~~~~~~l~~h~~~--V~-~l~~spd~~~l~ 363 (604)
..|..+.|||.++||.|-+..+ .+.|||+. .+..+..+.+-..+ .. -+.|+-++++++
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~----sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~A 147 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIA----SGMIVFSFNGISQPYLGWPVLKFSIDDKYVA 147 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEecc----CceeEeeccccCCcccccceeeeeecchhhh
Confidence 5699999999999999876543 49999998 66667777766555 55 688999999888
Q ss_pred EEeCCCceEEEEEECCCceEE-EEecCCCCCCeEEEEEecCC--CEEEE-----EecCCeEEEEEcC-CCeeeeeece--
Q psy10566 364 VVGPEDCHELWVWNIETELLR-VKLNHSPEDSLTSCSWNRDG--TKFVC-----GGIRGQFYQCDIE-GQVLDSWEGV-- 432 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~--~~l~s-----~~~dg~i~iwd~~-~~~~~~~~~~-- 432 (604)
-...+ .++++++ ++... ..+..-....|....|+|.+ ..|+. .+..+.+++|.+. +..+....-.
T Consensus 148 Rvv~~---sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~ 223 (561)
T COG5354 148 RVVGS---SLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKV 223 (561)
T ss_pred hhccC---eEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEee
Confidence 77555 4999997 43321 11111123568888999954 34443 4567889999984 4444433322
Q ss_pred eEEEEEEcCCCCEEEEEe-----------CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEEEE
Q psy10566 433 RVNCLWCRSDGKSVLAAD-----------THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVHLW 499 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~-----------~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~lw 499 (604)
.-..+.|.+.|+++++-. ....++++++............++|..++|.|.++.+++.+ .+..+.++
T Consensus 224 ~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~ 303 (561)
T COG5354 224 SGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVF 303 (561)
T ss_pred cccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeec
Confidence 334466777888765431 12468888888655555555689999999999988766554 67789999
Q ss_pred ecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC---CcEEEEeCCCCcceE-EeeCCCCCeeEEEEcCCCCcEE
Q psy10566 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED---GKVYIWHVKRELPIA-TLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d---g~I~iwd~~~~~~~~-~l~~h~~~V~~v~~sp~~~~~l 575 (604)
|++.. ....+ ..+.... .+++|.+++++.++-| |.|-+||......+. .+.+.. ..-+.|+|+ +.++
T Consensus 304 ~lr~N-l~~~~--Pe~~rNT---~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd-~qF~ 374 (561)
T COG5354 304 DLRGN-LRFYF--PEQKRNT---IFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPD-GQFY 374 (561)
T ss_pred ccccc-eEEec--CCccccc---ccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCC--ceEeeccCC-ceEE
Confidence 99876 32222 2222112 4567999999988765 789999988654443 565543 355689999 6666
Q ss_pred EEEe------CCCcEEEECCCCCC
Q psy10566 576 ASVS------DDCTVRIWGPHLNT 593 (604)
Q Consensus 576 ~s~s------~Dg~I~iW~~~~~~ 593 (604)
.+.. .|..|+||++....
T Consensus 375 ~~~~ts~k~~~Dn~i~l~~v~g~~ 398 (561)
T COG5354 375 DTDTTSEKLRVDNSIKLWDVYGAK 398 (561)
T ss_pred EecCCCcccccCcceEEEEecCch
Confidence 6553 37889999997643
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-09 Score=111.00 Aligned_cols=211 Identities=15% Similarity=0.127 Sum_probs=134.0
Q ss_pred eecccCCCcEEEEEEcCCCCe--E-EEEECCCe--EEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLK--L-ATGSKDTT--VIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE- 368 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~--l-asgs~dg~--i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d- 368 (604)
+.|..+...+.+-+|||||+. + ++...+|. |.+.++. .+....+..+.+ .....+|||||+.|+..+..
T Consensus 178 ~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~--~g~~~~lt~~~g---~~~~p~wSPDG~~Laf~s~~~ 252 (428)
T PRK01029 178 RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLE--NPAGKKILALQG---NQLMPTFSPRKKLLAFISDRY 252 (428)
T ss_pred eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECC--CCCceEeecCCC---CccceEECCCCCEEEEEECCC
Confidence 344445666778899999975 3 24444444 6666665 444444444444 34568999999998876642
Q ss_pred Cc--eEEEEEECCCc--eEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCe--EEEEEcC--CCeeeeeec--eeEEEE
Q psy10566 369 DC--HELWVWNIETE--LLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQ--FYQCDIE--GQVLDSWEG--VRVNCL 437 (604)
Q Consensus 369 ~~--~~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~--i~iwd~~--~~~~~~~~~--~~v~~l 437 (604)
+. ..+..|++.++ .....+...........+|+|||+.|+..+ .+|. |++++++ +.....+.. ..+...
T Consensus 253 g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p 332 (428)
T PRK01029 253 GNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCP 332 (428)
T ss_pred CCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccce
Confidence 21 13444777653 122222222223346789999999888766 4564 4444553 232333322 246678
Q ss_pred EEcCCCCEEEEEeCC---CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec---CCeEEEEecCCCceeeEe
Q psy10566 438 WCRSDGKSVLAADTH---HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS---TQGVHLWDLRDRILLRKF 510 (604)
Q Consensus 438 ~~s~~g~~l~~~~~d---g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~~~~~~~~~ 510 (604)
.|+|||+.++..+.+ ..|.+||+.+++...+......+....|+|||+.++.... ...|+++|+.+++.....
T Consensus 333 ~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt 411 (428)
T PRK01029 333 AWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV 411 (428)
T ss_pred eECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 999999998877553 4699999988876655544456778999999998886544 346889998877654433
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-08 Score=99.88 Aligned_cols=235 Identities=14% Similarity=0.074 Sum_probs=150.3
Q ss_pred EcCCCCeEEEEEC----------CCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 309 FSPDGLKLATGSK----------DTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 309 fspdg~~lasgs~----------dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+||||+.|+.+.. +..|.+||.. +.+....+.-- ......++++|||+++++...+...
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~----t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~ 128 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQ----THLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSP 128 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECc----cCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCC
Confidence 9999997776654 7899999998 55555555532 1223478999999999988765335
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc--CCCeee----eeece--eE-EEEEEcC-
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI--EGQVLD----SWEGV--RV-NCLWCRS- 441 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~----~~~~~--~v-~~l~~s~- 441 (604)
.|-+.|+.+++.+..+..+. ...-...+++... +-+.||......+ +|+... .+.+. .+ ..-.+.+
T Consensus 129 ~V~VvD~~~~kvv~ei~vp~--~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~ 204 (352)
T TIGR02658 129 AVGVVDLEGKAFVRMMDVPD--CYHIFPTANDTFF--MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNK 204 (352)
T ss_pred EEEEEECCCCcEEEEEeCCC--CcEEEEecCCccE--EEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcC
Confidence 89999999999988887422 2222222222222 2234454444333 333111 11110 00 0003345
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCc-----cccccc--------CCCCeeEEEECCCCCEEEEEec----------CCeEEE
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLT-----DSNLLQ--------EDHPVMSFTIDATDRLALLNVS----------TQGVHL 498 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~-----~~~~~~--------~~~~i~~~~~s~~~~~l~~~~~----------dg~I~l 498 (604)
+|+++++... |.|.+.|+.... ....+. ......-++++++++.+++... .+.|.+
T Consensus 205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V 283 (352)
T TIGR02658 205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV 283 (352)
T ss_pred CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence 7777766666 999999964432 222211 1223345999999999998532 257999
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEEee
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~l~ 556 (604)
+|..+++.+..+.... ....+.++++++ ++++.+ .++.|.++|..+++.+.++.
T Consensus 284 iD~~t~kvi~~i~vG~----~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 284 VDAKTGKRLRKIELGH----EIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred EECCCCeEEEEEeCCC----ceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence 9999999998887432 223345579999 777666 57889999999999998873
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-08 Score=112.90 Aligned_cols=240 Identities=11% Similarity=0.094 Sum_probs=157.9
Q ss_pred EEEEEcCC-CCeEEEEECCCeEEEEEeCCCCceeEeeEEecc--------------CCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 305 WFCKFSPD-GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--------------HTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 305 ~~v~fspd-g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--------------h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
..++++++ |.++++-+.++.|.+||.. .. ....+.+ +-.....+++.+++..|+++...+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~--G~---~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n 645 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD--GN---FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTEN 645 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC--CC---EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCC
Confidence 45688875 6677777788899999976 11 1222211 112357899999988777766554
Q ss_pred ceEEEEEECCCceEEEEecCCC---------------CCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeeec--
Q psy10566 370 CHELWVWNIETELLRVKLNHSP---------------EDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWEG-- 431 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~---------------~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-- 431 (604)
..|+++|..++........+. -.....++|+| ++..+++.+.++.|++||.....+..+.+
T Consensus 646 -~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G 724 (1057)
T PLN02919 646 -HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDG 724 (1057)
T ss_pred -ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCC
Confidence 379999988765432211100 11346899999 56666777788999999986544433321
Q ss_pred ---------------eeEEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCcccccc-------------c---------CCC
Q psy10566 432 ---------------VRVNCLWCRSDGKSVL-AADTHHRIRTYNFEHLTDSNLL-------------Q---------EDH 473 (604)
Q Consensus 432 ---------------~~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~~~~~~~~~-------------~---------~~~ 473 (604)
.....++++|+++.++ +-+.++.|++||+.++...... . ...
T Consensus 725 ~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~ 804 (1057)
T PLN02919 725 YERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQ 804 (1057)
T ss_pred ccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhcc
Confidence 1345789999998554 5555689999998765321110 0 011
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc-----------ceEEEEeeeCCCCCcEEEEEeCCCcEE
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ-----------GQFTIHSCFGGANQDFVASGSEDGKVY 542 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~sgs~dg~I~ 542 (604)
....++++++|..+++...++.|++||..++...... +... .......++.+++|+++++-+.++.|+
T Consensus 805 ~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tia-G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Ir 883 (1057)
T PLN02919 805 HPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLA-GTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIR 883 (1057)
T ss_pred CCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEe-ccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEE
Confidence 2458899999998888888999999999887554322 2110 001122345568899999988999999
Q ss_pred EEeCCCCcc
Q psy10566 543 IWHVKRELP 551 (604)
Q Consensus 543 iwd~~~~~~ 551 (604)
+||+.+++.
T Consensus 884 vid~~~~~~ 892 (1057)
T PLN02919 884 YLDLNKGEA 892 (1057)
T ss_pred EEECCCCcc
Confidence 999998765
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-09 Score=102.20 Aligned_cols=243 Identities=15% Similarity=0.201 Sum_probs=166.2
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE----EEEecCCC------------CCCeEEEEEecCC--CEEE
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL----RVKLNHSP------------EDSLTSCSWNRDG--TKFV 408 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~----~~~~~~~~------------~~~v~~~~~~~~~--~~l~ 408 (604)
..-|.++.|...|.+|++|..+| .|.++.-..... .....+.| ...|..+.|.+++ ..++
T Consensus 25 adiis~vef~~~Ge~LatGdkgG--RVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGG--RVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred hcceeeEEeecccceEeecCCCC--eEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 45688999999999999998888 888886543221 11111122 2358889999855 5788
Q ss_pred EEecCCeEEEEEcCCCeee------------------------------------ee---eceeEEEEEEcCCCCEEEEE
Q psy10566 409 CGGIRGQFYQCDIEGQVLD------------------------------------SW---EGVRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 409 s~~~dg~i~iwd~~~~~~~------------------------------------~~---~~~~v~~l~~s~~g~~l~~~ 449 (604)
..+.|.+|++|.+..+..+ .+ +...|+++.++.|+..++++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA 182 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA 182 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence 8999999999987311100 00 01258899999999988776
Q ss_pred eCCCeEEEEEcCCCcc-ccc---cc-----CCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCcee----eEeec---
Q psy10566 450 DTHHRIRTYNFEHLTD-SNL---LQ-----EDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILL----RKFQG--- 512 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~-~~~---~~-----~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~----~~~~~--- 512 (604)
.|-+|.+|+++-... ..+ .. ...-|++..|+|.. +.++.+++.|+|++.|++....- +.+..
T Consensus 183 -DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped 261 (433)
T KOG1354|consen 183 -DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED 261 (433)
T ss_pred -cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence 466899998864321 111 11 13457888899865 56777888999999999853211 11111
Q ss_pred ------cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC-CCCcceEEeeCCCC------------Ce---eEEEEcCC
Q psy10566 513 ------VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV-KRELPIATLSGHTR------------TV---SCVAWNPV 570 (604)
Q Consensus 513 ------~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~-~~~~~~~~l~~h~~------------~V---~~v~~sp~ 570 (604)
...-+..|.-+-++++|+|+++-+. -+|++||+ ...+++.+++.|.. .| ..++|+-+
T Consensus 262 p~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~ 340 (433)
T KOG1354|consen 262 PSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGN 340 (433)
T ss_pred CcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCC
Confidence 1122334555667899999998643 58999999 46778888877642 22 45789987
Q ss_pred CCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+..++|||....+++++...+..
T Consensus 341 -~~~v~TGsy~n~frvf~~~~gsk 363 (433)
T KOG1354|consen 341 -DSYVMTGSYNNVFRVFNLARGSK 363 (433)
T ss_pred -cceEecccccceEEEecCCCCcc
Confidence 78999999999999999766653
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-10 Score=115.17 Aligned_cols=292 Identities=11% Similarity=0.158 Sum_probs=194.2
Q ss_pred cCcCCCCcc--ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC---CceeEeeEEeccCCCCeeEEEECCC
Q psy10566 284 CTKEEFPCE--TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV---TFTCQHRKTLEGHTLGVAYLAWSPD 358 (604)
Q Consensus 284 ~~~~~~p~~--~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~---~~~~~~~~~l~~h~~~V~~l~~spd 358 (604)
|+.+.+... ..+.+.||+..|..++--.+.+-+++++.|++|++|.+.++ -++..+..++..|+.+|..+.|-.+
T Consensus 716 ~dt~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~ 795 (1034)
T KOG4190|consen 716 CDTDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD 795 (1034)
T ss_pred cCCcccccceeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec
Confidence 444444444 34578899999999988777888999999999999999853 2334477889999999999999999
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecC-CCCCCeEEEEEec--CCCEEEEE-ecCCeEEEEEcC-CCeeeeeec--
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNH-SPEDSLTSCSWNR--DGTKFVCG-GIRGQFYQCDIE-GQVLDSWEG-- 431 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~s~-~~dg~i~iwd~~-~~~~~~~~~-- 431 (604)
-++++++ |+ -|.+||.--+.....+.. ...+.+..+...+ +...++.| +...+|+++|.+ +.....|+-
T Consensus 796 lr~i~Sc--D~--giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn 871 (1034)
T KOG4190|consen 796 LRSIASC--DG--GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCN 871 (1034)
T ss_pred cceeeec--cC--cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEecc
Confidence 8888765 44 499999887776654432 2223334444444 33444444 678899999984 333333321
Q ss_pred -----eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC-CCCeeEEEECCCCCEEEEEecCCeEEE-EecCCC
Q psy10566 432 -----VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE-DHPVMSFTIDATDRLALLNVSTQGVHL-WDLRDR 504 (604)
Q Consensus 432 -----~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~I~l-wd~~~~ 504 (604)
..+.++++.+.|++++++-.+|.|.+.|.+++........ ......++ .|....++....|.++.+ |..-++
T Consensus 872 a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldg 950 (1034)
T KOG4190|consen 872 APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDG 950 (1034)
T ss_pred CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCC
Confidence 2588999999999999999999999999999875543322 12222222 355667777777888888 876666
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC----CcceEEeeC--CCCCeeEEEEcCCCCcEEEEE
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR----ELPIATLSG--HTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~----~~~~~~l~~--h~~~V~~v~~sp~~~~~l~s~ 578 (604)
......+........+. .-|.-++++...+.+.+|--.. ...+..++. ..+..++++--|- +.-+..|
T Consensus 951 imh~q~kpppepahflq-----svgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPL-N~afLaG 1024 (1034)
T KOG4190|consen 951 IMHLQDKPPPEPAHFLQ-----SVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPL-NCAFLAG 1024 (1034)
T ss_pred eeeeccCCCCcchhhhh-----ccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccc-cchhhcc
Confidence 44444433332211121 2344577777777777874321 111222222 2467788888887 5667778
Q ss_pred eCCCcEEE
Q psy10566 579 SDDCTVRI 586 (604)
Q Consensus 579 s~Dg~I~i 586 (604)
...|.|.+
T Consensus 1025 ne~G~IaL 1032 (1034)
T KOG4190|consen 1025 NEHGAIAL 1032 (1034)
T ss_pred CCCCceee
Confidence 88888875
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-08 Score=115.41 Aligned_cols=240 Identities=9% Similarity=0.057 Sum_probs=155.9
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecC-CC------------CCCeEEEEEecCCCEEEEEe-cCCeE
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH-SP------------EDSLTSCSWNRDGTKFVCGG-IRGQF 416 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~-~~------------~~~v~~~~~~~~~~~l~s~~-~dg~i 416 (604)
..+++++++..++.+...+ ..|++||.... ....+.. +. -.....+++.++++.|+++. ..+.|
T Consensus 571 ~gvavd~~~g~lyVaDs~n-~rI~v~d~~G~-~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I 648 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNH-NRIVVTDLDGN-FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL 648 (1057)
T ss_pred ceEEEECCCCeEEEEECCC-CeEEEEeCCCC-EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence 4678887644444444333 38999998644 3433332 11 12357899999888766654 45789
Q ss_pred EEEEcCCCeeeeeec-------------------eeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCccccccc------
Q psy10566 417 YQCDIEGQVLDSWEG-------------------VRVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLTDSNLLQ------ 470 (604)
Q Consensus 417 ~iwd~~~~~~~~~~~-------------------~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~~~~------ 470 (604)
+.+|..+..+..+.+ .....++++| ++..+++.+.++.|++||..++.......
T Consensus 649 r~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~ 728 (1057)
T PLN02919 649 REIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERN 728 (1057)
T ss_pred EEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcccc
Confidence 999987666655422 1245789999 56666777778899999987654321110
Q ss_pred ---------CCCCeeEEEECCCCCEEE-EEecCCeEEEEecCCCceeeEeecc------------c-c-----ceEEEEe
Q psy10566 471 ---------EDHPVMSFTIDATDRLAL-LNVSTQGVHLWDLRDRILLRKFQGV------------T-Q-----GQFTIHS 522 (604)
Q Consensus 471 ---------~~~~i~~~~~s~~~~~l~-~~~~dg~I~lwd~~~~~~~~~~~~~------------~-~-----~~~~i~~ 522 (604)
.-.....++++|+++.++ +...++.|++||+.++.......+. . + .......
T Consensus 729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~G 808 (1057)
T PLN02919 729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLG 808 (1057)
T ss_pred CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCce
Confidence 012456799999998555 4555789999999876532111000 0 0 0001122
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee-------------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS-------------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~-------------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+.++++|+++++-+.+++|++||..++....... +.-.....|+++++ +.++++-+.++.|++||+
T Consensus 809 vavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~d-G~lyVaDt~Nn~Irvid~ 887 (1057)
T PLN02919 809 VLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGEN-GRLFVADTNNSLIRYLDL 887 (1057)
T ss_pred eeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCC-CCEEEEECCCCEEEEEEC
Confidence 3446888988888999999999998776543221 11235788999999 688999999999999999
Q ss_pred CCCC
Q psy10566 590 HLNT 593 (604)
Q Consensus 590 ~~~~ 593 (604)
.++.
T Consensus 888 ~~~~ 891 (1057)
T PLN02919 888 NKGE 891 (1057)
T ss_pred CCCc
Confidence 8875
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-09 Score=109.72 Aligned_cols=186 Identities=9% Similarity=0.088 Sum_probs=147.3
Q ss_pred cCCCEEEEEecCCeEEEEEcC-CCeeeeeece-----eEEEEEE--------------------cCCCCEEEEEeCCCeE
Q psy10566 402 RDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV-----RVNCLWC--------------------RSDGKSVLAADTHHRI 455 (604)
Q Consensus 402 ~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-----~v~~l~~--------------------s~~g~~l~~~~~dg~I 455 (604)
|...+++....||.+++||.. ++....+... ...+..| +.+...++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 456789999999999999984 4444444321 1111111 2334568888899999
Q ss_pred EEEEcCCCccccccc---CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 456 RTYNFEHLTDSNLLQ---EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
.+|++..++....+. |.+.|.++.++.+-..+.+++.|..+..|+...+..++.+......+.. ...+|||..+
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~s---l~is~D~~~l 159 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSS---LCISPDGKIL 159 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccce---EEEcCCCCEE
Confidence 999999987766554 6788999999999999999999999999999999999999887764444 4446999999
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC-----CCcEEEEEeCCCcEEEECCCCC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV-----YHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~-----~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++++ +.|++||+++++.+.+|.||.++|++++|-.. |..+|.+...+..+.+|-+...
T Consensus 160 ~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 160 LTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred Eecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence 9885 57999999999999999999999999999765 4567777777888999987663
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.4e-08 Score=107.62 Aligned_cols=285 Identities=17% Similarity=0.256 Sum_probs=184.0
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEE----EeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIW----DVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iw----d~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
..+.|.++.|-++..-++.+..+|.|.+. +.. ....+.+..+ ..+|.+++||||+..|+.++.++ ++.+
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~--~~~~E~VG~v---d~GI~a~~WSPD~Ella~vT~~~--~l~~ 146 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPD--EDEIEIVGSV---DSGILAASWSPDEELLALVTGEG--NLLL 146 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCC--CceeEEEEEE---cCcEEEEEECCCcCEEEEEeCCC--EEEE
Confidence 45789999999999989889999999999 443 3344444443 46899999999999999999887 5555
Q ss_pred EECC---------------C--------ceEEEEec------------C-----------CCCCCeEEEEEecCCCEEEE
Q psy10566 376 WNIE---------------T--------ELLRVKLN------------H-----------SPEDSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 376 wd~~---------------~--------~~~~~~~~------------~-----------~~~~~v~~~~~~~~~~~l~s 409 (604)
.+.. . |+....|. . ...+.-..++|-.||.+||+
T Consensus 147 mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAV 226 (928)
T PF04762_consen 147 MTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAV 226 (928)
T ss_pred EeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEE
Confidence 4311 0 11111110 0 01224567889999999999
Q ss_pred Eec---C---CeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCcccccc----cCCCC
Q psy10566 410 GGI---R---GQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADT---HHRIRTYNFEHLTDSNLL----QEDHP 474 (604)
Q Consensus 410 ~~~---d---g~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~---dg~I~i~d~~~~~~~~~~----~~~~~ 474 (604)
.+. . ..+++|+-+|.....-+.. --.+++|.|.|+.+++... ...|.+|.-+..+-..+. .....
T Consensus 227 ss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~ 306 (928)
T PF04762_consen 227 SSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEK 306 (928)
T ss_pred EEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCce
Confidence 875 2 4789999988755443322 2346899999998888765 345777776554322211 23567
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE-eeeCCCCCcEEEEEeCCCcEEEEeCC----CC
Q psy10566 475 VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH-SCFGGANQDFVASGSEDGKVYIWHVK----RE 549 (604)
Q Consensus 475 i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~sgs~dg~I~iwd~~----~~ 549 (604)
+..+.|++++..|++...|. |.+|-..+..-..+..-+-.....+. ..|.+.+...+...+.+|.+..++.. .+
T Consensus 307 v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s 385 (928)
T PF04762_consen 307 VIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRS 385 (928)
T ss_pred eeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEec
Confidence 99999999999999987665 99999887643222211111100111 23333344556666665666554431 11
Q ss_pred c--------ceEEee-----------------------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 550 L--------PIATLS-----------------------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 550 ~--------~~~~l~-----------------------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
. .+..+. .-..+|++++|+++ +..++.-..||.|.+|......
T Consensus 386 ~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~-~~~~avl~~d~~l~~~~~~~~~ 459 (928)
T PF04762_consen 386 PGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPS-NSRFAVLTSDGSLSIYEWDLKN 459 (928)
T ss_pred CCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCC-CCeEEEEECCCCEEEEEecCCC
Confidence 0 111111 12468999999998 6668888999999999865543
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.1e-09 Score=107.07 Aligned_cols=285 Identities=15% Similarity=0.165 Sum_probs=192.1
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC----------CCeEEEEeCCCce
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD----------SSHLLVVGPEDCH 371 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd----------~~~l~s~~~d~~~ 371 (604)
..-.++.|+|.| +||.|+ ...|.|-|.. +.+.+..+.-|...|+.+.|.|- ...++.++.|-.|
T Consensus 16 sN~~A~Dw~~~G-LiAygs-hslV~VVDs~----s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~G 89 (1062)
T KOG1912|consen 16 SNRNAADWSPSG-LIAYGS-HSLVSVVDSR----SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISG 89 (1062)
T ss_pred ccccccccCccc-eEEEec-CceEEEEehh----hhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccC
Confidence 346678999987 677776 4578888876 77888999999999999999873 1234444555556
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec---CC-CEEEEEecCCeEEEEEc-CCCeeeeeec-e-eEEEEEEcC-CC
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR---DG-TKFVCGGIRGQFYQCDI-EGQVLDSWEG-V-RVNCLWCRS-DG 443 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~s~~~dg~i~iwd~-~~~~~~~~~~-~-~v~~l~~s~-~g 443 (604)
.|.+||...+..+..+. .+.+++..++|-+ +. ..+++-.....+.+|+. .|..+-.+.. + ...|+.+.| |.
T Consensus 90 rIil~d~~~~s~~~~l~-~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~ 168 (1062)
T KOG1912|consen 90 RIILVDFVLASVINWLS-HSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDS 168 (1062)
T ss_pred cEEEEEehhhhhhhhhc-CCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCc
Confidence 99999999998888887 5678899999987 34 46666777789999987 5666544433 2 456688887 56
Q ss_pred CEEEEEeCCCeEEEEEcCCCccc-------cccc-CC------------C-------------CeeEEEECCCCCEEEEE
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDS-------NLLQ-ED------------H-------------PVMSFTIDATDRLALLN 490 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~-------~~~~-~~------------~-------------~i~~~~~s~~~~~l~~~ 490 (604)
+.+...+..|.+.+.+.-..... .+.. +. . ....++|+|.-+.++..
T Consensus 169 rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi 248 (1062)
T KOG1912|consen 169 RHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFI 248 (1062)
T ss_pred ceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEE
Confidence 66777777777777665322111 0000 00 0 01235678887777777
Q ss_pred ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc----------------ceEE
Q psy10566 491 VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL----------------PIAT 554 (604)
Q Consensus 491 ~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~----------------~~~~ 554 (604)
.-...+.++|++-..++....-..+....+..+. .+....++++..||.+.||-.+... ....
T Consensus 249 ~~prellv~dle~~~~l~vvpier~~akfv~vlP-~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~ 327 (1062)
T KOG1912|consen 249 TFPRELLVFDLEYECCLAVVPIERGGAKFVDVLP-DPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHV 327 (1062)
T ss_pred EeccceEEEcchhhceeEEEEeccCCcceeEecc-CCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEE
Confidence 7888899999998888877776665544454443 3566789999999999999876421 1111
Q ss_pred eeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 555 LSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 555 l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+.. .+-.+......|.....++.--.+|.+.+|.+.+++.
T Consensus 328 vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri 368 (1062)
T KOG1912|consen 328 VRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRI 368 (1062)
T ss_pred EeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCc
Confidence 111 1122333344554345555555688899999997663
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.1e-08 Score=100.66 Aligned_cols=186 Identities=18% Similarity=0.293 Sum_probs=139.9
Q ss_pred cCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc---CCCCeeEEEE------CC--------------CCCeEEEEe
Q psy10566 310 SPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG---HTLGVAYLAW------SP--------------DSSHLLVVG 366 (604)
Q Consensus 310 spdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~---h~~~V~~l~~------sp--------------d~~~l~s~~ 366 (604)
.|-+.++|....||.++||+.. ..+....+.. -.+.-++..| +| +...++-|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~----~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt 77 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTA----KNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGT 77 (541)
T ss_pred CchhheEeecCCCCeEEEEEcc----CceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeec
Confidence 4556799999999999999987 2222222221 1233334444 22 233455555
Q ss_pred CCCceEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSD 442 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~ 442 (604)
..| .|.+|++..|+...++. ..|.+.|.++.++.+-..|.+++.|+.+..|+. +.+.++.|... .+.+++++||
T Consensus 78 ~~g--~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D 155 (541)
T KOG4547|consen 78 PQG--SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPD 155 (541)
T ss_pred CCc--cEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCC
Confidence 555 89999999999888887 678999999999999999999999999999999 56777777765 6889999999
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCC-----CCEEEEEec-CCeEEEEecCC
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDAT-----DRLALLNVS-TQGVHLWDLRD 503 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~-----~~~l~~~~~-dg~I~lwd~~~ 503 (604)
|+.+++++ +.|++||+++.+....+ +|.++|.++.|.-+ |.+++++.. +..+.+|-+..
T Consensus 156 ~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 156 GKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred CCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 99998876 58999999998876554 57899999999776 677766544 44466776544
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.6e-09 Score=108.59 Aligned_cols=217 Identities=12% Similarity=0.170 Sum_probs=155.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
..-++|.||.+.|.-+.|+.+.+.|-|...+|.|.||-+- .+.+.....-....+.|.+++|+.||..+..+-.||
T Consensus 62 smNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmly--kgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDG-- 137 (1189)
T KOG2041|consen 62 SMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLY--KGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDG-- 137 (1189)
T ss_pred chhhhhccCcceEEEEEeccccccccccCCCceEEEEeee--cccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccC--
Confidence 4557899999999999999999999999999999999987 222222222223456789999999999998888888
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--------------ceeEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--------------GVRVNCL 437 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------~~~v~~l 437 (604)
.|.+=.++..+.-.+-.. ......+.|++|.+.++.+-.+|.+.++|..|.....++ ++++..+
T Consensus 138 avIVGsvdGNRIwgKeLk--g~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i 215 (1189)
T KOG2041|consen 138 AVIVGSVDGNRIWGKELK--GQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEI 215 (1189)
T ss_pred CEEEEeeccceecchhcc--hheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccce
Confidence 566655554433222211 123457899999999999999999999998653221111 1234444
Q ss_pred EE--------cCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC---------eEEEEe
Q psy10566 438 WC--------RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ---------GVHLWD 500 (604)
Q Consensus 438 ~~--------s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---------~I~lwd 500 (604)
.| -|+...++++..+|.+.+..-.......++..+..+....|+++|..+++++.+. .|.+|.
T Consensus 216 ~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys 295 (1189)
T KOG2041|consen 216 EWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS 295 (1189)
T ss_pred eeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEec
Confidence 43 3577889999999999998877776667777778899999999999999988653 355554
Q ss_pred cCCCceeeEeecccc
Q psy10566 501 LRDRILLRKFQGVTQ 515 (604)
Q Consensus 501 ~~~~~~~~~~~~~~~ 515 (604)
.-|+.+.+++....
T Consensus 296 -p~G~i~gtlkvpg~ 309 (1189)
T KOG2041|consen 296 -PYGHIVGTLKVPGS 309 (1189)
T ss_pred -cchhheEEEecCCc
Confidence 33555666654443
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.7e-08 Score=101.43 Aligned_cols=255 Identities=14% Similarity=0.030 Sum_probs=158.0
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeE-EEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY-LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~-l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~ 390 (604)
++..++.++.+|.+..+|..+ ++.+...... ..+.+ ... .+..++.++.++ .+..||..+|+.+......
T Consensus 104 ~~~~v~v~~~~g~l~ald~~t----G~~~W~~~~~-~~~~~~p~v--~~~~v~v~~~~g--~l~a~d~~tG~~~W~~~~~ 174 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAED----GKELWRAKLS-SEVLSPPLV--ANGLVVVRTNDG--RLTALDAATGERLWTYSRV 174 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCC----CcEeeeeccC-ceeecCCEE--ECCEEEEECCCC--eEEEEEcCCCceeeEEccC
Confidence 456777888899999999872 3333222211 12221 111 244667777776 8999999999887766532
Q ss_pred CCCC----eEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece---------eEEEEEEcC--CCCEEEEEeCCCe
Q psy10566 391 PEDS----LTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV---------RVNCLWCRS--DGKSVLAADTHHR 454 (604)
Q Consensus 391 ~~~~----v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~---------~v~~l~~s~--~g~~l~~~~~dg~ 454 (604)
.... ..+... .+..++.+..+|.+..+|. +|+.+...... +...+..+| .+..+++++.+|.
T Consensus 175 ~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~ 252 (377)
T TIGR03300 175 TPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGR 252 (377)
T ss_pred CCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCE
Confidence 1100 011111 2346778888899999998 56654332210 000111111 3567888889999
Q ss_pred EEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEE
Q psy10566 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 534 (604)
++.||..+++......... ..... ..+..+++++.+|.++.+|..+++.+-.+......... ... ..+..+++
T Consensus 253 l~a~d~~tG~~~W~~~~~~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~s--sp~--i~g~~l~~ 325 (377)
T TIGR03300 253 VAALDLRSGRVLWKRDASS-YQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLT--APA--VVGGYLVV 325 (377)
T ss_pred EEEEECCCCcEEEeeccCC-ccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccc--cCE--EECCEEEE
Confidence 9999998876544333211 11122 25678888889999999999999877555321111111 001 13568899
Q ss_pred EeCCCcEEEEeCCCCcceEEeeCCCCCee-EEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 535 GSEDGKVYIWHVKRELPIATLSGHTRTVS-CVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 535 gs~dg~I~iwd~~~~~~~~~l~~h~~~V~-~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
++.+|.|+++|..+|+.+..+..+...+. +..+. + ..|+.++.||.|..|
T Consensus 326 ~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~--~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 326 GDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-G--DGLLVQTRDGDLYAF 376 (377)
T ss_pred EeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-C--CEEEEEeCCceEEEe
Confidence 99999999999999999999887664433 33333 2 347788999999876
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-08 Score=98.14 Aligned_cols=278 Identities=14% Similarity=0.150 Sum_probs=181.2
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---------
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC--------- 370 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~--------- 370 (604)
-.-++..++|||.|.+|++.... -|.+|.-. ....+..+. | ..|..+.|||+++||.+-+....
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~----~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp 103 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGP----SKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISP 103 (561)
T ss_pred cCcchhheeecCcchheehhhcc-ceEEcccc----chhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCC
Confidence 44578899999999999987654 48999876 222333443 4 35999999999999999765430
Q ss_pred ----eEEEEEECCCceEEEEecCCCCC-CeE-EEEEecCCCEEEEEecCCeEEEEEcCCC----eeeeeeceeEEEEEEc
Q psy10566 371 ----HELWVWNIETELLRVKLNHSPED-SLT-SCSWNRDGTKFVCGGIRGQFYQCDIEGQ----VLDSWEGVRVNCLWCR 440 (604)
Q Consensus 371 ----~~i~vwd~~~~~~~~~~~~~~~~-~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~v~~l~~s 440 (604)
..+.+||..+|..+..+...... ..+ -+.|+.+.++++-. ....++++++.+. ..+.+....+....++
T Consensus 104 ~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsis 182 (561)
T COG5354 104 FTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEITDNIEEHPFKNLRPVGILDFSIS 182 (561)
T ss_pred ccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEecCCccccCchhhccccceeeEEec
Confidence 14899999999998888743222 133 67888888776655 4557889987332 2222333467888889
Q ss_pred CCCCE--EEE-----EeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEec-----------CCeEEEEec
Q psy10566 441 SDGKS--VLA-----ADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVS-----------TQGVHLWDL 501 (604)
Q Consensus 441 ~~g~~--l~~-----~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-----------dg~I~lwd~ 501 (604)
|.++. ++. ....+.+++|.+.......... ....-..+.|.+.|+++++-.. ...++++++
T Consensus 183 P~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~ 262 (561)
T COG5354 183 PEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRI 262 (561)
T ss_pred CCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEee
Confidence 87543 332 2456788999887544332222 1233456788889988775422 245788888
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEE--EeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS--GSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s--gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
....+.... ...+ .|....|.|.++-+++ |-.+-.+.++|++.. .... ...+.=+.+.|+|. .++++.++
T Consensus 263 ~e~~i~V~~-~~~~---pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~--~Pe~~rNT~~fsp~-~r~il~ag 334 (561)
T COG5354 263 TERSIPVEK-DLKD---PVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFY--FPEQKRNTIFFSPH-ERYILFAG 334 (561)
T ss_pred cccccceec-cccc---cceeeeecccCCceeEEecccccceeecccccc-eEEe--cCCcccccccccCc-ccEEEEec
Confidence 743332221 3333 3334455566665544 446888999999865 3333 34455577889998 77777777
Q ss_pred CC---CcEEEECCCCCC
Q psy10566 580 DD---CTVRIWGPHLNT 593 (604)
Q Consensus 580 ~D---g~I~iW~~~~~~ 593 (604)
-| |.|-+|++...-
T Consensus 335 F~nl~gni~i~~~~~rf 351 (561)
T COG5354 335 FDNLQGNIEIFDPAGRF 351 (561)
T ss_pred CCccccceEEeccCCce
Confidence 65 678999887654
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1e-07 Score=93.02 Aligned_cols=145 Identities=19% Similarity=0.221 Sum_probs=114.3
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEECCC-eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSKDT-TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~dg-~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
-+|.+.|....+..+++-++.|..|| .+-|+|.. .. ....+...-+.|.++..+|+|++++++.... .+++.
T Consensus 356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~----~~-e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~--el~vi 428 (668)
T COG4946 356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKD----GG-EVKRIEKDLGNIEAVKVSPDGKKVVVANDRF--ELWVI 428 (668)
T ss_pred cCCCCceEEEEEccCCcceEEeccCCceEEEEecC----Cc-eEEEeeCCccceEEEEEcCCCcEEEEEcCce--EEEEE
Confidence 46888899999999999999999999 89999987 22 3455566678899999999999988876665 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC----eEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG----QFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
|+++|..... .....+-|+..+|+|+++++|-+--+| .|+++|+.+..+...... .-.+-+|.|+++++..-+
T Consensus 429 didngnv~~i-dkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 429 DIDNGNVRLI-DKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred EecCCCeeEe-cccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence 9999986443 335567899999999999999987776 689999987555444332 223457889999876654
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-07 Score=97.02 Aligned_cols=256 Identities=13% Similarity=0.030 Sum_probs=160.8
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
+..+++++.+|.|..+|.. +++.+-...-.......... ++..+++++.++ .+..+|..+|+.+.+....
T Consensus 65 ~~~v~v~~~~g~v~a~d~~----tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g--~l~ald~~tG~~~W~~~~~-- 134 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAE----TGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKG--EVIALDAEDGKELWRAKLS-- 134 (377)
T ss_pred CCEEEEECCCCeEEEEEcc----CCcEeeeecCCCCcccceEE--cCCEEEEEcCCC--EEEEEECCCCcEeeeeccC--
Confidence 5678888889999999987 33333332222211112222 466778888787 8999999999987765522
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeecee-EE------EEEEcCCCCEEEEEeCCCeEEEEEcCCCc
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVR-VN------CLWCRSDGKSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~-v~------~l~~s~~g~~l~~~~~dg~I~i~d~~~~~ 464 (604)
..+.+.-.. .+..++.++.+|.++.+|. +|+.+-.+.... .. ...+ .+..++++..++.+..+|..+++
T Consensus 135 ~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~ 211 (377)
T TIGR03300 135 SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQ 211 (377)
T ss_pred ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCC
Confidence 222221111 3557778888999999998 576655443321 10 1111 13467888888999999998876
Q ss_pred ccccccCCCC-----------e-eEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 465 DSNLLQEDHP-----------V-MSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 465 ~~~~~~~~~~-----------i-~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
.........+ + .+..+ .+..+++++.+|.++.||..+++.+-....... ... ...+..+
T Consensus 212 ~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~-----~~p--~~~~~~v 282 (377)
T TIGR03300 212 PLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRDASSY-----QGP--AVDDNRL 282 (377)
T ss_pred EeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeeccCCc-----cCc--eEeCCEE
Confidence 4432211000 0 01111 356788888899999999999987665542110 000 1245678
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGH-TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.++.||.|+.+|..+|+.+...... .....+.... +..+++++.||.|++||..+++
T Consensus 283 yv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~---g~~l~~~~~~G~l~~~d~~tG~ 341 (377)
T TIGR03300 283 YVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAVV---GGYLVVGDFEGYLHWLSREDGS 341 (377)
T ss_pred EEECCCCeEEEEECCCCcEEEccccccCCccccCEEE---CCEEEEEeCCCEEEEEECCCCC
Confidence 88889999999999999887665322 1222222232 4578888999999999998876
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.6e-08 Score=98.29 Aligned_cols=198 Identities=14% Similarity=0.226 Sum_probs=141.8
Q ss_pred CCCcEEEEEEcCCCC--eEEE-----EECCCeEEEEEeCCCCceeEe--eEEeccCCCCeeEEEECCCCCeEEE-EeC--
Q psy10566 300 HCDEVWFCKFSPDGL--KLAT-----GSKDTTVIIWDVDPVTFTCQH--RKTLEGHTLGVAYLAWSPDSSHLLV-VGP-- 367 (604)
Q Consensus 300 H~~~V~~v~fspdg~--~las-----gs~dg~i~iwd~~~~~~~~~~--~~~l~~h~~~V~~l~~spd~~~l~s-~~~-- 367 (604)
|...|+...+||.+. .+|+ +|.-+.|+||.+... +.... .+++. ...=..+.|++-|.-|+. ++.
T Consensus 164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~-~~~~~~a~ksFF--kadkvqm~WN~~gt~LLvLastdV 240 (566)
T KOG2315|consen 164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEE-GQHQPVANKSFF--KADKVQMKWNKLGTALLVLASTDV 240 (566)
T ss_pred eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccc-cccchhhhcccc--ccceeEEEeccCCceEEEEEEEee
Confidence 677899999999754 4554 345567999987611 11111 11111 122345778887764433 222
Q ss_pred C-------CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE--ecCCeEEEEEcCCCeeeeeeceeEEEEE
Q psy10566 368 E-------DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG--GIRGQFYQCDIEGQVLDSWEGVRVNCLW 438 (604)
Q Consensus 368 d-------~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~v~~l~ 438 (604)
| |..++++.+++...+...+. ..++|.++.|+|+++.|+++ -.-..+.+||+++..+..+...+-+++.
T Consensus 241 Dktn~SYYGEq~Lyll~t~g~s~~V~L~--k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~egpRN~~~ 318 (566)
T KOG2315|consen 241 DKTNASYYGEQTLYLLATQGESVSVPLL--KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFPEGPRNTAF 318 (566)
T ss_pred cCCCccccccceEEEEEecCceEEEecC--CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCCCCCccceE
Confidence 1 23378899988555555554 56899999999999887664 3456899999999999999988999999
Q ss_pred EcCCCCEEEEEeCC---CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec------CCeEEEEecCC
Q psy10566 439 CRSDGKSVLAADTH---HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS------TQGVHLWDLRD 503 (604)
Q Consensus 439 ~s~~g~~l~~~~~d---g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~I~lwd~~~ 503 (604)
|+|.|++++.++-+ |.|.+||+.+.+...... ....+-+.|+|||.++++++. |+.++||+...
T Consensus 319 fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~-a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 319 FNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFK-AANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG 391 (566)
T ss_pred ECCCCCEEEEeecCCCCCceEEEeccchhhccccc-cCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecC
Confidence 99999998887764 789999999865544433 334567899999999999876 67799999753
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-08 Score=89.59 Aligned_cols=265 Identities=14% Similarity=0.149 Sum_probs=163.9
Q ss_pred CCeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECC---CCC-eEEEEeCCCceEEEEEECCCceEEEEecCCC-----
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSP---DSS-HLLVVGPEDCHELWVWNIETELLRVKLNHSP----- 391 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~sp---d~~-~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~----- 391 (604)
-|.+.+|++.+..... ..++. .....+..+.|+- +|. .++-+-..| .|.++..........+..-.
T Consensus 45 ~Gkl~Lys~~d~~~~~--l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G--~i~~~r~~~~~ss~~L~~ls~~ki~ 120 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSP--LDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARG--QIQLYRNDEDESSVHLRGLSSKKIS 120 (339)
T ss_pred ccceEEEeecccccCc--cceeeeecccccceeeeeeccCCccceeeeccccc--eEEEEeeccceeeeeecccchhhhh
Confidence 4678889887332222 11221 1345577777753 344 333344444 78888766544333333111
Q ss_pred CCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CC--eeeeeece--eEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCcc
Q psy10566 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQ--VLDSWEGV--RVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLTD 465 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~--~~~~~~~~--~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~ 465 (604)
.....++.|++.+..++++..+|.+.+-+.+ .. ..+.|+.| ......|+. +.+.+.+|+.|+.+..||++....
T Consensus 121 ~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~ 200 (339)
T KOG0280|consen 121 VVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT 200 (339)
T ss_pred heeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc
Confidence 1124578899999999999999999865553 32 33367766 455566665 457889999999999999994332
Q ss_pred c---ccccCCCCeeEEEECC-CCCEEEEEecCCeEEEEecCC-CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 466 S---NLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 466 ~---~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
. ....|...|.++.-+| .+.++++|+.|..|++||.++ ++++..-. ..+++..+..... ..+.+++++-.+|
T Consensus 201 ~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~-~~~~lL~~CMh~G- 277 (339)
T KOG0280|consen 201 FIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPE-IFHRLLAACMHNG- 277 (339)
T ss_pred eeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecch-hhhHHHHHHHhcC-
Confidence 1 1233667788887776 477999999999999999995 55554332 2244555433221 1122333333333
Q ss_pred EEEEeCCCC--c---ceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CCCcEE-EECCCCCCC
Q psy10566 541 VYIWHVKRE--L---PIATLSGHTRTVSCVAWNPVYHQMIASVS-DDCTVR-IWGPHLNTN 594 (604)
Q Consensus 541 I~iwd~~~~--~---~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~Dg~I~-iW~~~~~~~ 594 (604)
.+|-+...+ + .....+.|.+-+..-.|... ..+||||+ .|+.++ +|-.-++..
T Consensus 278 ~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~-~~~lATCsFYDk~~~~~Wl~~t~~~ 337 (339)
T KOG0280|consen 278 AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSK-DSFLATCSFYDKKIRQLWLHITGEP 337 (339)
T ss_pred ceEEEecccccchheeeeccccccceeeccccccc-cceeeeeeccccceeeeeeeccCCc
Confidence 556555543 2 33455678888888888666 67899986 477755 887766543
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-08 Score=102.82 Aligned_cols=209 Identities=16% Similarity=0.157 Sum_probs=147.7
Q ss_pred CCCCccceeecccCCCcEEEEEEcCC------------CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEE
Q psy10566 287 EEFPCETTQVLNDHCDEVWFCKFSPD------------GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354 (604)
Q Consensus 287 ~~~p~~~~~~l~~H~~~V~~v~fspd------------g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~ 354 (604)
+....+.++.++-|...|+.+.|.|- .-+||++...|.|.+||.. .+..+..+..|.++|..++
T Consensus 41 Ds~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~----~~s~~~~l~~~~~~~qdl~ 116 (1062)
T KOG1912|consen 41 DSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFV----LASVINWLSHSNDSVQDLC 116 (1062)
T ss_pred ehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEeh----hhhhhhhhcCCCcchhhee
Confidence 45567888999999999999999872 1267888889999999998 6667778888999999999
Q ss_pred ECC---CC-CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-------
Q psy10566 355 WSP---DS-SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE------- 422 (604)
Q Consensus 355 ~sp---d~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~------- 422 (604)
|-| +. ..|++..... ++.+|+..+|+...+....| ....|+.+.| |.+.+..-+..|.+.+.+.-
T Consensus 117 W~~~rd~Srd~LlaIh~ss--~lvLwntdtG~k~Wk~~ys~-~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~ 193 (1062)
T KOG1912|consen 117 WVPARDDSRDVLLAIHGSS--TLVLWNTDTGEKFWKYDYSH-EILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDV 193 (1062)
T ss_pred eeeccCcchheeEEecCCc--EEEEEEccCCceeeccccCC-cceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCC
Confidence 965 34 3445545454 89999999999888877544 4567789999 77888888888988888762
Q ss_pred -CCeeeeeece-------------------e--------EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC-CC
Q psy10566 423 -GQVLDSWEGV-------------------R--------VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE-DH 473 (604)
Q Consensus 423 -~~~~~~~~~~-------------------~--------v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~-~~ 473 (604)
|+..+.-..+ + ...++|+|.-+.++.......+.++|++-......... .+
T Consensus 194 pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~ 273 (1062)
T KOG1912|consen 194 PGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERG 273 (1062)
T ss_pred CceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccC
Confidence 2332222111 0 11246788877777777888899999877655544432 22
Q ss_pred CeeEEEECC--CCCEEEEEecCCeEEEEecC
Q psy10566 474 PVMSFTIDA--TDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 474 ~i~~~~~s~--~~~~l~~~~~dg~I~lwd~~ 502 (604)
.+.-+.+-| ....+++...||.+.+|--+
T Consensus 274 ~akfv~vlP~~~rd~LfclH~nG~ltirvrk 304 (1062)
T KOG1912|consen 274 GAKFVDVLPDPRRDALFCLHSNGRLTIRVRK 304 (1062)
T ss_pred CcceeEeccCCCcceEEEEecCCeEEEEEee
Confidence 233334433 44567777777777777543
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-07 Score=98.11 Aligned_cols=193 Identities=11% Similarity=0.031 Sum_probs=125.0
Q ss_pred cEEEEEEcCCCCe-EEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEE-eCCCceEEEEEE
Q psy10566 303 EVWFCKFSPDGLK-LATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV-GPEDCHELWVWN 377 (604)
Q Consensus 303 ~V~~v~fspdg~~-lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~-~~d~~~~i~vwd 377 (604)
.+....|||||+. ++..+.+ ..|.++|+. ++....+.. ..+......|+|||+.++.. +.++...|+++|
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~--tg~~~~lt~---~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 263 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLY--TGKKEKIAS---SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYD 263 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECC--CCcEEEEec---CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEE
Confidence 7788999999984 6654443 457778876 333333332 34456678899999877654 334445899999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C--eEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCC--
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G--QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH-- 452 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~d-- 452 (604)
+.++....... +........|+|||+.++..+.. + .|++.|+++...+...........|+|+|+.++.....
T Consensus 264 l~~g~~~~LT~--~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~~~~~SPDG~~Ia~~~~~~~ 341 (419)
T PRK04043 264 TNTKTLTQITN--YPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKNNSSVSTYKNYIVYSSRETN 341 (419)
T ss_pred CCCCcEEEccc--CCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCcCceECCCCCEEEEEEcCCC
Confidence 98887544322 22223456899999988777643 3 67777886544433221111234899999998877654
Q ss_pred -------CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC---eEEEEecCC
Q psy10566 453 -------HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ---GVHLWDLRD 503 (604)
Q Consensus 453 -------g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~ 503 (604)
..|.+.|+.++....+... .......|+|||+.++.....+ .+.++++..
T Consensus 342 ~~~~~~~~~I~v~d~~~g~~~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 342 NEFGKNTFNLYLISTNSDYIRRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred cccCCCCcEEEEEECCCCCeEECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence 3688889887765544443 3344688999999888776533 255556543
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.9e-07 Score=95.02 Aligned_cols=206 Identities=8% Similarity=0.009 Sum_probs=133.4
Q ss_pred CeeEEEECCCCCe-EEEEeCC-CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-C--CeEEEEEcCC
Q psy10566 349 GVAYLAWSPDSSH-LLVVGPE-DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-R--GQFYQCDIEG 423 (604)
Q Consensus 349 ~V~~l~~spd~~~-l~s~~~d-~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d--g~i~iwd~~~ 423 (604)
.+....|+|||+. ++..+.. +...|+++|+.+++...... ..+......|+|||+.++.... + ..|+++|+.+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~--~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~ 266 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS--SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNT 266 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec--CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 6778999999985 6655555 34589999999887655443 3345667889999987765432 3 4788888866
Q ss_pred Ceeeeeecee--EEEEEEcCCCCEEEEEeCC-C--eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC-----
Q psy10566 424 QVLDSWEGVR--VNCLWCRSDGKSVLAADTH-H--RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST----- 493 (604)
Q Consensus 424 ~~~~~~~~~~--v~~l~~s~~g~~l~~~~~d-g--~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----- 493 (604)
.....+.... .....|+|||+.++..+.. + .|.++|+.++....+...... ...|+|+|+.++.....
T Consensus 267 g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~--~~~~SPDG~~Ia~~~~~~~~~~ 344 (419)
T PRK04043 267 KTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKN--NSSVSTYKNYIVYSSRETNNEF 344 (419)
T ss_pred CcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCc--CceECCCCCEEEEEEcCCCccc
Confidence 5555554432 3456899999988877643 2 588888887766444432222 24899999998877654
Q ss_pred ----CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-C--cEEEEeCCCCcceEEeeCCCCCeeE
Q psy10566 494 ----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-G--KVYIWHVKRELPIATLSGHTRTVSC 564 (604)
Q Consensus 494 ----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-g--~I~iwd~~~~~~~~~l~~h~~~V~~ 564 (604)
..|.+.|+.++... .+..... .....|+|||+.|+..+.+ + .+.+.++.. .....+....+.|..
T Consensus 345 ~~~~~~I~v~d~~~g~~~-~LT~~~~----~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g-~~~~~l~~~~g~~~~ 416 (419)
T PRK04043 345 GKNTFNLYLISTNSDYIR-RLTANGV----NQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY-NKSFLFPLKVGKIQS 416 (419)
T ss_pred CCCCcEEEEEECCCCCeE-ECCCCCC----cCCeEECCCCCEEEEEEccCCcEEEEEEecCC-CeeEEeecCCCccCC
Confidence 36888898887643 3332211 1123457999988766543 2 366666653 334444444444443
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-09 Score=120.34 Aligned_cols=197 Identities=13% Similarity=0.195 Sum_probs=151.8
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
++.|-..|.++.-+|...+.+||+.||.|++|... ....+..+. .....|+.+.|+.+|+.+..+..|| .+.+
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~----~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg--~l~l 2277 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWG----HGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDG--DLSL 2277 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEecc----CCCeEEEeeccCcchhhhhhhcccCCceeeeccCC--ceee
Confidence 34455788888889999999999999999999987 222333332 1237899999999999999988888 7999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe---cCCeEEEEEcC----CCeeeeeeceeEEEEEEcCCCCEEEE
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG---IRGQFYQCDIE----GQVLDSWEGVRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~----~~~~~~~~~~~v~~l~~s~~g~~l~~ 448 (604)
|.+.. + ...-...|+.....+.|-. ..+++++ .++.+.+||.- ...+...+.+.++++++.|....+++
T Consensus 2278 ~q~~p-k-~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllis 2353 (2439)
T KOG1064|consen 2278 WQASP-K-PYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLIS 2353 (2439)
T ss_pred cccCC-c-ceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEe
Confidence 99872 2 2233346777788888865 5566654 46799999972 34455555558999999999999999
Q ss_pred EeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
|+.+|.|++||++..+....++. ++ ...++++++..|.|+||++.....++++..
T Consensus 2354 ggr~G~v~l~D~rqrql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2354 GGRKGEVCLFDIRQRQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred cCCcCcEEEeehHHHHHHHHhhh--------hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence 99999999999988766555443 34 667899999999999999998877777664
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.7e-10 Score=109.56 Aligned_cols=239 Identities=10% Similarity=0.173 Sum_probs=165.5
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc-------eEEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE-------LLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 410 (604)
-.+..+.||...|..++--.+.+.+++++.|+ +|++|.++.. .+..++ ..|+.+|.++.|..+.+++++
T Consensus 726 irL~nf~GH~~~iRai~AidNENSFiSASkDK--TVKLWSik~EgD~~~tsaCQfTY-~aHkk~i~~igfL~~lr~i~S- 801 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDK--TVKLWSIKPEGDEIGTSACQFTY-QAHKKPIHDIGFLADLRSIAS- 801 (1034)
T ss_pred eeeecccCcHHHhHHHHhcccccceeeccCCc--eEEEEEeccccCccccceeeeEh-hhccCcccceeeeeccceeee-
Confidence 34567889999999998888888999999999 8999998642 244444 478899999999988887765
Q ss_pred ecCCeEEEEEc-CCCeeeeeec----eeEEEEEEcC--CCCEEEEE-eCCCeEEEEEcCCCccccccc------CCCCee
Q psy10566 411 GIRGQFYQCDI-EGQVLDSWEG----VRVNCLWCRS--DGKSVLAA-DTHHRIRTYNFEHLTDSNLLQ------EDHPVM 476 (604)
Q Consensus 411 ~~dg~i~iwd~-~~~~~~~~~~----~~v~~l~~s~--~g~~l~~~-~~dg~I~i~d~~~~~~~~~~~------~~~~i~ 476 (604)
.||.|.+||. .|..+..... ..+..+.+-+ +...++++ +...+|+++|.+...-..... ....+.
T Consensus 802 -cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R 880 (1034)
T KOG4190|consen 802 -CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTR 880 (1034)
T ss_pred -ccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhee
Confidence 5889999997 4554442221 1222233333 34445555 678899999998865433222 245688
Q ss_pred EEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE-EeCCCCcceEEe
Q psy10566 477 SFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI-WHVKRELPIATL 555 (604)
Q Consensus 477 ~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i-wd~~~~~~~~~l 555 (604)
++++.+.|+.++++-++|.|.+.|.++|+.+..+.........+ . .|..+.++....|.++.+ |..-.|....+.
T Consensus 881 ~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllql---a-apsdq~L~~saldHslaVnWhaldgimh~q~ 956 (1034)
T KOG4190|consen 881 AIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQL---A-APSDQALAQSALDHSLAVNWHALDGIMHLQD 956 (1034)
T ss_pred EEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhh---c-CchhHHHHhhcccceeEeeehhcCCeeeecc
Confidence 99999999999999999999999999999887776544322222 2 367778888888999999 988877665555
Q ss_pred eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 556 SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 556 ~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+....+.. |-..-+.-++++.....+.+|.
T Consensus 957 kpppepah---flqsvgpSLV~a~~Gn~lgVYa 986 (1034)
T KOG4190|consen 957 KPPPEPAH---FLQSVGPSLVTAQNGNILGVYA 986 (1034)
T ss_pred CCCCcchh---hhhccCceeEEeccCcEEEEEe
Confidence 43322211 1111144566666666666663
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-06 Score=83.47 Aligned_cols=219 Identities=10% Similarity=0.057 Sum_probs=139.8
Q ss_pred EEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe-cCCCEEEEEecCCeEEEEEcCCCeee---
Q psy10566 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN-RDGTKFVCGGIRGQFYQCDIEGQVLD--- 427 (604)
Q Consensus 352 ~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~--- 427 (604)
+++|.+....|..+...+ +.|+.|+..++....... .....+++. ++ ..++.+...+ +.++|.....+.
T Consensus 4 gp~~d~~~g~l~~~D~~~-~~i~~~~~~~~~~~~~~~----~~~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g~~~~~~ 76 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPG-GRIYRVDPDTGEVEVIDL----PGPNGMAFDRPD-GRLYVADSGG-IAVVDPDTGKVTVLA 76 (246)
T ss_dssp EEEEETTTTEEEEEETTT-TEEEEEETTTTEEEEEES----SSEEEEEEECTT-SEEEEEETTC-EEEEETTTTEEEEEE
T ss_pred ceEEECCCCEEEEEEcCC-CEEEEEECCCCeEEEEec----CCCceEEEEccC-CEEEEEEcCc-eEEEecCCCcEEEEe
Confidence 578988444444444433 389999999887654333 127788888 55 5555555544 455587543222
Q ss_pred ee-----eceeEEEEEEcCCCCEEEEEeCC--------CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEE-EEecC
Q psy10566 428 SW-----EGVRVNCLWCRSDGKSVLAADTH--------HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLAL-LNVST 493 (604)
Q Consensus 428 ~~-----~~~~v~~l~~s~~g~~l~~~~~d--------g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~d 493 (604)
.. .....+++++.++|+..++.... |.|..++.. .+.......-...+.++|+|+++.|+ +-+..
T Consensus 77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~ 155 (246)
T PF08450_consen 77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFN 155 (246)
T ss_dssp EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTT
T ss_pred eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeeccccc
Confidence 22 22478999999999977766543 567778877 44444444556678999999999776 45667
Q ss_pred CeEEEEecCCCce----eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc-
Q psy10566 494 QGVHLWDLRDRIL----LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN- 568 (604)
Q Consensus 494 g~I~lwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s- 568 (604)
+.|..|++..... .+.+...........-+....+|++.++....+.|.++|.+ |+.+..+......+++++|.
T Consensus 156 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg 234 (246)
T PF08450_consen 156 GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGG 234 (246)
T ss_dssp TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEES
T ss_pred ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEEC
Confidence 8899999864322 12222111111112233445789888888889999999988 89888887776689999994
Q ss_pred CCCCcEEEEEe
Q psy10566 569 PVYHQMIASVS 579 (604)
Q Consensus 569 p~~~~~l~s~s 579 (604)
|+...+++|.+
T Consensus 235 ~~~~~L~vTta 245 (246)
T PF08450_consen 235 PDGKTLYVTTA 245 (246)
T ss_dssp TTSSEEEEEEB
T ss_pred CCCCEEEEEeC
Confidence 55455666643
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG2659|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.9e-09 Score=93.72 Aligned_cols=123 Identities=24% Similarity=0.360 Sum_probs=102.0
Q ss_pred CcccCCCChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCC---h---hHHHHHHHHHcCChHHHHHHHhhhhhhcCCc
Q psy10566 78 AVKTMTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDH---P---SAAKFRQHIMDGDWSKADHDLNDLEYLLDSR 151 (604)
Q Consensus 78 ~~~~~~~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~---~---~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~ 151 (604)
......+.++|+.+||+.||-..||.+||..+.+|+|+..+. + +-.+++.+|..|+-++|...+..+.+.+.
T Consensus 18 ~~~~~~~~~~d~n~LVmnylv~eg~~EaA~~Fa~e~~i~~~~~d~~~~~eR~~Ir~~I~~G~Ie~Aie~in~l~PeiL-- 95 (228)
T KOG2659|consen 18 QLMKVSVMREDLNRLVMNYLVHEGYVEAAEKFAKESGIKPPSIDLDSMDERLQIRRAIEEGQIEEAIEKVNQLNPEIL-- 95 (228)
T ss_pred HHhccCcchhhHHHHHHHHHHhccHHHHHHHhccccCCCCccCchhhHhHHHHHHHHHHhccHHHHHHHHHHhChHHH--
Confidence 455677889999999999999999999999999999987732 2 23468999999999999999999977554
Q ss_pred cchhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcCCCCC-Chhhhhhhhhh
Q psy10566 152 GDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNH-NTAKVHELSSF 202 (604)
Q Consensus 152 ~~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~~-~~~~~~~L~~l 202 (604)
..-+++.|.+++|++.|++.++...+|+.++|..+.|... +...++.|...
T Consensus 96 d~n~~l~F~Lq~q~lIEliR~~~~eeal~F~q~~LA~~a~e~~~~~~elE~~ 147 (228)
T KOG2659|consen 96 DTNRELFFHLQQLHLIELIREGKTEEALEFAQTKLAPFAEENPKKMEELERT 147 (228)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHccccccccHHHHHHHHHH
Confidence 2235688999999999999999999999999999999853 44555555443
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-06 Score=82.63 Aligned_cols=216 Identities=19% Similarity=0.225 Sum_probs=142.4
Q ss_pred EEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC-CCCCeEEEEeCCCceEEEEEECCCceE
Q psy10566 306 FCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS-PDSSHLLVVGPEDCHELWVWNIETELL 383 (604)
Q Consensus 306 ~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s-pd~~~l~s~~~d~~~~i~vwd~~~~~~ 383 (604)
++.|.+ +|.++++--..+.|..|+.. +.... ...+. . ...+++. +++ .++.+...+ +.++|..+++.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~--~~~~~-~~~~~---~-~~G~~~~~~~g-~l~v~~~~~---~~~~d~~~g~~ 72 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPD--TGEVE-VIDLP---G-PNGMAFDRPDG-RLYVADSGG---IAVVDPDTGKV 72 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT--TTEEE-EEESS---S-EEEEEEECTTS-EEEEEETTC---EEEEETTTTEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECC--CCeEE-EEecC---C-CceEEEEccCC-EEEEEEcCc---eEEEecCCCcE
Confidence 578888 77777777778999999987 22221 12222 1 6677777 564 556666665 67779998865
Q ss_pred EEEecC---C-CCCCeEEEEEecCCCEEEEEecC--------CeEEEEEcCCCeeeeeece-eEEEEEEcCCCCEEE-EE
Q psy10566 384 RVKLNH---S-PEDSLTSCSWNRDGTKFVCGGIR--------GQFYQCDIEGQVLDSWEGV-RVNCLWCRSDGKSVL-AA 449 (604)
Q Consensus 384 ~~~~~~---~-~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~-~v~~l~~s~~g~~l~-~~ 449 (604)
...... . .....+.+++.|+|+..++.... |.|..++.+++......+. ..+.++|+|+++.++ +-
T Consensus 73 ~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~pNGi~~s~dg~~lyv~d 152 (246)
T PF08450_consen 73 TVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTVVADGLGFPNGIAFSPDGKTLYVAD 152 (246)
T ss_dssp EEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEEEEEEESSEEEEEEETTSSEEEEEE
T ss_pred EEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEEEecCcccccceEECCcchheeecc
Confidence 443332 1 34568899999999977776544 5678888885544444443 578999999999776 55
Q ss_pred eCCCeEEEEEcCCCcc----cc-ccc--C-CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 450 DTHHRIRTYNFEHLTD----SN-LLQ--E-DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~----~~-~~~--~-~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
+..+.|..|++..... .. ... . ......++++.+|+..++....+.|.++|.+ |+.+..+...... ...
T Consensus 153 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~--~t~ 229 (246)
T PF08450_consen 153 SFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPR--PTN 229 (246)
T ss_dssp TTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSS--EEE
T ss_pred cccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCC--EEE
Confidence 6678899999864322 11 111 1 1247789999999988888889999999987 8888877765333 334
Q ss_pred eeeCCCCCcEEEEE
Q psy10566 522 SCFGGANQDFVASG 535 (604)
Q Consensus 522 ~~~~~~~~~~l~sg 535 (604)
+++..++.+.|+..
T Consensus 230 ~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 230 CAFGGPDGKTLYVT 243 (246)
T ss_dssp EEEESTTSSEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 45555665555443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-06 Score=81.24 Aligned_cols=226 Identities=15% Similarity=0.153 Sum_probs=134.3
Q ss_pred EEECCCCCeEEEEeCCCceEEEEEECCCc--eEE--EEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee
Q psy10566 353 LAWSPDSSHLLVVGPEDCHELWVWNIETE--LLR--VKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS 428 (604)
Q Consensus 353 l~~spd~~~l~s~~~d~~~~i~vwd~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 428 (604)
++.+++|+.|++.- |. .|.+=..+.. ..+ ..+.......-..++|+||+..||.+...|+|++||+.|..+..
T Consensus 3 ~~~~~~Gk~lAi~q-d~--~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~ 79 (282)
T PF15492_consen 3 LALSSDGKLLAILQ-DQ--CIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFV 79 (282)
T ss_pred eeecCCCcEEEEEe-cc--EEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEE
Confidence 56678888777654 43 3444433321 121 22232333446789999999999999999999999998766655
Q ss_pred eec---------eeEEEEEEcCC------CCEEEEEeCCCeEEEEEcCCCcc-----ccccc----CCCCeeEEEECCCC
Q psy10566 429 WEG---------VRVNCLWCRSD------GKSVLAADTHHRIRTYNFEHLTD-----SNLLQ----EDHPVMSFTIDATD 484 (604)
Q Consensus 429 ~~~---------~~v~~l~~s~~------g~~l~~~~~dg~I~i~d~~~~~~-----~~~~~----~~~~i~~~~~s~~~ 484 (604)
+.. ..|..+.|.+. ...+++....|.++-|-+..+.. ...+. ....|.++.++|..
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h 159 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH 159 (282)
T ss_pred cCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC
Confidence 443 13556655443 22577778888888777643221 11111 26689999999999
Q ss_pred CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc------EEEEeCCCCcceEEeeCC
Q psy10566 485 RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK------VYIWHVKRELPIATLSGH 558 (604)
Q Consensus 485 ~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~------I~iwd~~~~~~~~~l~~h 558 (604)
++|++|+.... +++. -.....+...-+.+...|..+.+. ..+|+. -.+|.+-+.+........
T Consensus 160 ~LLlVgG~~~~------~~~~----s~a~~~GLtaWRiL~~~Pyyk~v~-~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~ 228 (282)
T PF15492_consen 160 RLLLVGGCEQN------QDGM----SKASSCGLTAWRILSDSPYYKQVT-SSEDDITASSKRRGLLRIPSFKFFSRQGQE 228 (282)
T ss_pred CEEEEeccCCC------CCcc----ccccccCceEEEEcCCCCcEEEcc-ccCccccccccccceeeccceeeeeccccC
Confidence 99888876432 0000 001111222222232233322222 222221 234444333222222234
Q ss_pred CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 559 TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 559 ~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...|..|..||| +.+||+...+|.|.+|++.+-.
T Consensus 229 ~d~i~kmSlSPd-g~~La~ih~sG~lsLW~iPsL~ 262 (282)
T PF15492_consen 229 QDGIFKMSLSPD-GSLLACIHFSGSLSLWEIPSLR 262 (282)
T ss_pred CCceEEEEECCC-CCEEEEEEcCCeEEEEecCcch
Confidence 678999999999 8999999999999999997754
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.2e-07 Score=83.32 Aligned_cols=232 Identities=8% Similarity=-0.022 Sum_probs=150.0
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeee---cee
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWE---GVR 433 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~ 433 (604)
...+|+.+|..| ...+|...+.+.....-..+...|+-+.=.. ....+..++.|.++++.++++...+... ...
T Consensus 83 kc~~la~gG~~g--~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~ 160 (344)
T KOG4532|consen 83 KCVTLADGGASG--QFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLT 160 (344)
T ss_pred cccEEEeccccc--eeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccc
Confidence 445788888887 8999999876654444333333332221111 2335778889999999998754433222 234
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc----ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS----NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~----~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
+.++++++|++++++.+....|..|.+...... ........-.+..|+.....+|+++.||++.|||++.......
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~ 240 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMA 240 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchh
Confidence 889999999999999999999999998764322 1222345567888999999999999999999999997543322
Q ss_pred eec--cccceEEEEeeeCCCCC--cEEEEEeCCCcEEEEeCCCCcceEEeeC-------C-CCCeeEEEEcCCCCcEEEE
Q psy10566 510 FQG--VTQGQFTIHSCFGGANQ--DFVASGSEDGKVYIWHVKRELPIATLSG-------H-TRTVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 510 ~~~--~~~~~~~i~~~~~~~~~--~~l~sgs~dg~I~iwd~~~~~~~~~l~~-------h-~~~V~~v~~sp~~~~~l~s 577 (604)
... ...+...++.|-+++.| .+|+..-.-+.+.+.|+++++..+.+.. | ...|..-.|+.+ +..+.+
T Consensus 241 ~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~-n~s~~v 319 (344)
T KOG4532|consen 241 EISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNE-NESNDV 319 (344)
T ss_pred hhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCC-Cccccc
Confidence 211 11122255556666544 3444444567899999999876655432 3 234777788877 444444
Q ss_pred EeCCCcEEEECCCCCC
Q psy10566 578 VSDDCTVRIWGPHLNT 593 (604)
Q Consensus 578 ~s~Dg~I~iW~~~~~~ 593 (604)
.+++ .+.=|++.+..
T Consensus 320 ~~e~-~~ae~ni~srs 334 (344)
T KOG4532|consen 320 KNEL-QGAEYNILSRS 334 (344)
T ss_pred ccch-hhheeeccccc
Confidence 4443 24556665543
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.9e-06 Score=97.01 Aligned_cols=279 Identities=13% Similarity=0.162 Sum_probs=174.2
Q ss_pred CcEEEEEEcCCCCe--EEEEECCC--eEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 302 DEVWFCKFSPDGLK--LATGSKDT--TVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 302 ~~V~~v~fspdg~~--lasgs~dg--~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
..+...+|.+.... ++++.... .|.+..... ......+..+. .....|.++.|-++...++.+..+| .
T Consensus 22 ~~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~-~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~G--d 98 (928)
T PF04762_consen 22 LPITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQ-DGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASG--D 98 (928)
T ss_pred cccceEEEecCCCeEEEEECCCCcceEEEEEeecc-CCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCc--e
Confidence 35667777776553 33333222 233333321 11223344443 2356899999999999999988888 5
Q ss_pred EEEE----ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC------------------------CC
Q psy10566 373 LWVW----NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE------------------------GQ 424 (604)
Q Consensus 373 i~vw----d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~------------------------~~ 424 (604)
|.+. +..+... .....-...|.+++|+||+..++..+.++++.+.+-+ |+
T Consensus 99 i~~~~~~~~~~~~~~--E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGk 176 (928)
T PF04762_consen 99 IILVREDPDPDEDEI--EIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGK 176 (928)
T ss_pred EEEEEccCCCCCcee--EEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCc
Confidence 7777 4444332 2222334679999999999999999999988775421 11
Q ss_pred eeeeeece--------------------------eEEEEEEcCCCCEEEEEeC---C---CeEEEEEcCCCcccccccCC
Q psy10566 425 VLDSWEGV--------------------------RVNCLWCRSDGKSVLAADT---H---HRIRTYNFEHLTDSNLLQED 472 (604)
Q Consensus 425 ~~~~~~~~--------------------------~v~~l~~s~~g~~l~~~~~---d---g~I~i~d~~~~~~~~~~~~~ 472 (604)
.-..|+|. .-..++|-.||.++++.+. . ..+++|+-+..-....-...
T Consensus 177 KeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~ 256 (928)
T PF04762_consen 177 KETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVD 256 (928)
T ss_pred ccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCC
Confidence 11122111 2345789999999998875 2 46999997632111111123
Q ss_pred CCeeEEEECCCCCEEEEEec---CCeEEEEecCCCceeeEeeccc-cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 473 HPVMSFTIDATDRLALLNVS---TQGVHLWDLRDRILLRKFQGVT-QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 473 ~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+--.+++|-|.|+++++.-. ...|.+|. ++|.....|.-.. .....+..+.|++++..||..-.|. |.+|-..+
T Consensus 257 gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N 334 (928)
T PF04762_consen 257 GLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN 334 (928)
T ss_pred CccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC
Confidence 33457899999999998765 33466666 4554444444332 2223456677889999999987665 99999887
Q ss_pred Cc--ceEEeeCC-CCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 549 EL--PIATLSGH-TRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 549 ~~--~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
.. +.+.+... ...+..+.|+|..+..|...+.+|.+..+
T Consensus 335 YHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~ 376 (928)
T PF04762_consen 335 YHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIY 376 (928)
T ss_pred CEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEE
Confidence 54 22333322 33456699999877778887776776553
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.6e-08 Score=95.50 Aligned_cols=157 Identities=13% Similarity=0.113 Sum_probs=115.0
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCCCe--ee---eeec-eeEEEEEEcCCCCEEEEEeCCCeEE---EEEcCCCcc
Q psy10566 395 LTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV--LD---SWEG-VRVNCLWCRSDGKSVLAADTHHRIR---TYNFEHLTD 465 (604)
Q Consensus 395 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~---~~~~-~~v~~l~~s~~g~~l~~~~~dg~I~---i~d~~~~~~ 465 (604)
...+..+++++.++++..+....+++..++. .+ .... .+.+.+.+..+...+..+..-|.++ +|.....+.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~ 144 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC 144 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence 4456677888999999988887777774322 22 1111 1345556666666666665555544 444444777
Q ss_pred cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 466 SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 466 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
..+++|-.-+..++++||+++++++..|..|++-.....-.+..|- ||+.-+..+.. .++..|++||.|++|++|
T Consensus 145 ~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl----~~~~~LlS~sGD~tlr~W 220 (390)
T KOG3914|consen 145 EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISL----TDNYLLLSGSGDKTLRLW 220 (390)
T ss_pred chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeee----ccCceeeecCCCCcEEEE
Confidence 8888899999999999999999999999999998877665665554 68876665543 355679999999999999
Q ss_pred eCCCCcceEEe
Q psy10566 545 HVKRELPIATL 555 (604)
Q Consensus 545 d~~~~~~~~~l 555 (604)
|+.+|+.+.++
T Consensus 221 d~~sgk~L~t~ 231 (390)
T KOG3914|consen 221 DITSGKLLDTC 231 (390)
T ss_pred ecccCCccccc
Confidence 99999988765
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.4e-08 Score=92.73 Aligned_cols=279 Identities=12% Similarity=0.105 Sum_probs=189.4
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-CCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~ 378 (604)
|.+.|+.|.-+. .+++.+++.||.++.|.-.... -.+.+..+..|-..|.+++.+-++..+.+.+. |. .++++|+
T Consensus 8 hrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~is-GvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dh--s~KvfDv 83 (558)
T KOG0882|consen 8 HRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRIS-GVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDH--SVKVFDV 83 (558)
T ss_pred ccceeeeEeeeh-hheEEeeecchhhhhcCCCCcc-ceeehhhhHHHHHHHHhhhccccceeEeeccCccc--ceeEEEe
Confidence 788888776553 4699999999999999865211 23456667788999999999999988888777 66 8999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEec-CC---CEEE-EEecCCeEEEEEcCC--Cee---eeeeceeEEEEEEcCCCCEEEE
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNR-DG---TKFV-CGGIRGQFYQCDIEG--QVL---DSWEGVRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~-~~---~~l~-s~~~dg~i~iwd~~~--~~~---~~~~~~~v~~l~~s~~g~~l~~ 448 (604)
++-..+.-+... .....+.|.. .| ..++ +.-.+|.+.++|-.+ ... +.++-.+|.++.+.+.+..+++
T Consensus 84 En~DminmiKL~--~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vS 161 (558)
T KOG0882|consen 84 ENFDMINMIKLV--DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVS 161 (558)
T ss_pred eccchhhhcccc--cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceee
Confidence 886654333211 1112223322 22 1333 334568899998743 222 2333458999999999999999
Q ss_pred EeCCCeEEEEEcCC------Ccccc----------cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 449 ADTHHRIRTYNFEH------LTDSN----------LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 449 ~~~dg~I~i~d~~~------~~~~~----------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
....|.|.-|.... ..... .........++.|+|++..+.+-..|..|++++.++++.++.+..
T Consensus 162 iD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 162 IDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred ccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhc
Confidence 99999999999873 11111 112256688999999999999999999999999999977665542
Q ss_pred ccc-------------------------------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC----
Q psy10566 513 VTQ-------------------------------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---- 557 (604)
Q Consensus 513 ~~~-------------------------------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~---- 557 (604)
... ...... +.+...|++++-|+-=| |++.++.++.++..+-.
T Consensus 242 ~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~-~~fdes~~flly~t~~g-ikvin~~tn~v~ri~gk~e~i 319 (558)
T KOG0882|consen 242 VLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTN-AVFDESGNFLLYGTILG-IKVINLDTNTVVRILGKDEAI 319 (558)
T ss_pred cchhhhhccccccccceeehhhhhhHHhhHhhhcCcccce-eEEcCCCCEEEeeccee-EEEEEeecCeEEEEeccchhh
Confidence 110 001112 23457888999887766 88999988877666511
Q ss_pred --------------CCCC-------eeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 558 --------------HTRT-------VSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 558 --------------h~~~-------V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
+... -..+.+.+| +.+++++-.-..++++
T Consensus 320 r~~~~sl~q~~~k~~~~~~~~~a~~np~~~~~~d-pt~~c~a~kk~rfylf 369 (558)
T KOG0882|consen 320 RFTRLSLYQGAQKSNLAALEVAASNNPLLEFQKD-PTIVCTAFKKNRFYLF 369 (558)
T ss_pred hhhhHHHHhhhhhccchhhhhhhccCcccccCCC-CeEEEeeeecceEEEE
Confidence 1000 011235666 7777777777778887
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.2e-08 Score=89.58 Aligned_cols=277 Identities=19% Similarity=0.275 Sum_probs=168.7
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC-ceeEeeEEeccCC------------CCeeEEEECCCC--CeEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT-FTCQHRKTLEGHT------------LGVAYLAWSPDS--SHLLV 364 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~-~~~~~~~~l~~h~------------~~V~~l~~spd~--~~l~s 364 (604)
..+.|+++.|...|.||++|...|.|.+|.-+... ...+....+++|. ..|..+.|..++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 34679999999999999999999999999866211 1123334455554 357788887654 35666
Q ss_pred EeCCCceEEEEEECCCceEEEEecCCC--------CCCeEEEEE--ec---CCCEEEEEecCCeEEEEEcCCCeeeeeec
Q psy10566 365 VGPEDCHELWVWNIETELLRVKLNHSP--------EDSLTSCSW--NR---DGTKFVCGGIRGQFYQCDIEGQVLDSWEG 431 (604)
Q Consensus 365 ~~~d~~~~i~vwd~~~~~~~~~~~~~~--------~~~v~~~~~--~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 431 (604)
.+.|. +|++|.+............. .+++++..= -| ....++++. ..+.....+.
T Consensus 105 stNdk--tiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~----------p~rvyaNaH~ 172 (460)
T COG5170 105 STNDK--TIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAK----------PCRVYANAHP 172 (460)
T ss_pred ecCCc--eeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEec----------cceeccccce
Confidence 77787 89999987653322211111 111111100 00 001111111 0011112233
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc----cccccC-----CCCeeEEEECCCC-CEEEEEecCCeEEEEec
Q psy10566 432 VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD----SNLLQE-----DHPVMSFTIDATD-RLALLNVSTQGVHLWDL 501 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~----~~~~~~-----~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~ 501 (604)
..++++.+..|...++++ .|-+|.+|++..... ..+..+ ..-|++..|+|.. ..+..+++.|.|++-|+
T Consensus 173 yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~Dl 251 (460)
T COG5170 173 YHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDL 251 (460)
T ss_pred eEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhh
Confidence 468999999998877765 466888998765321 111112 3457888888864 55667778899999999
Q ss_pred CCCce----eeEe----e-----ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-CcceEEeeCCC--------
Q psy10566 502 RDRIL----LRKF----Q-----GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHT-------- 559 (604)
Q Consensus 502 ~~~~~----~~~~----~-----~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~-------- 559 (604)
+.... ...+ . .....+..|.-.-++++|++|++-+. -+|+|||.+. ..++.++.-|.
T Consensus 252 Rq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d 330 (460)
T COG5170 252 RQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELND 330 (460)
T ss_pred hhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHh
Confidence 84321 1111 1 11222345555667899999987643 5799999985 56777776553
Q ss_pred ----CCe---eEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 560 ----RTV---SCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 560 ----~~V---~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..| ..+.|+-+ ...+.+|+.....-|+-+.+
T Consensus 331 ~YEnDaifdkFeisfSgd-~~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 331 VYENDAIFDKFEISFSGD-DKHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred hhhccceeeeEEEEecCC-cccccccccccceeeecccc
Confidence 233 34678877 67788888887777776443
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.6e-08 Score=101.92 Aligned_cols=284 Identities=15% Similarity=0.173 Sum_probs=178.8
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC---CeEEEEeCCCceEEEEEE
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS---SHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~---~~l~s~~~d~~~~i~vwd 377 (604)
.+.+..+..+|.|+-+|.++.-| +.+-|++..-.....+..+ ..-.|..+.|+|.. ..+++.+..+ -.+|+
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~--tpw~vad~qws~h~a~~~wiVsts~qk---aiiwn 97 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHI--TPWQVADVQWSPHPAKPYWIVSTSNQK---AIIWN 97 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeecc--CcchhcceecccCCCCceeEEecCcch---hhhhh
Confidence 35688899999999999998877 4455666322222222211 12346677888753 3455544443 66787
Q ss_pred CC--CceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC--Ceeeeeec--eeEEEEEEcCCCCEEEEEe
Q psy10566 378 IE--TELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEG--QVLDSWEG--VRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 378 ~~--~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~--~~~~~~~~--~~v~~l~~s~~g~~l~~~~ 450 (604)
+. +...+..+.++|...|+.+.|+|.. ..+++++.|-.+..||++. ..+..+.. .....+.|+.....+++.+
T Consensus 98 lA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlass 177 (1081)
T KOG0309|consen 98 LAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASS 177 (1081)
T ss_pred hhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhc
Confidence 64 3455666667899999999999954 5788999999999999963 34444432 2455677777666677778
Q ss_pred CCCeEEEEEcCCCccc--ccccCCCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeecc-ccceEEEEeeeCC
Q psy10566 451 THHRIRTYNFEHLTDS--NLLQEDHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGG 526 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~--~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~ 526 (604)
....|.+||.+.+... ....+-..+..+.|..- ...+.+++.|++|+.||............. ...+..-+...+
T Consensus 178 hg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pf- 256 (1081)
T KOG0309|consen 178 HGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPF- 256 (1081)
T ss_pred cCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceecccccc-
Confidence 8888999999876432 22334555666666542 346788899999999998754322111111 111111111111
Q ss_pred CCCcEEEE---------EeCCCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCC---------CCcEEEEEeCCCcEEEE
Q psy10566 527 ANQDFVAS---------GSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPV---------YHQMIASVSDDCTVRIW 587 (604)
Q Consensus 527 ~~~~~l~s---------gs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~---------~~~~l~s~s~Dg~I~iW 587 (604)
-+|.++.- --.++.-..|+..+ .+++.++.||...|....|-.. ....|+|-|.|.++|+|
T Consensus 257 g~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlW 336 (1081)
T KOG0309|consen 257 GEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLW 336 (1081)
T ss_pred CceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEee
Confidence 11222211 11122233444443 4689999999998888777432 13579999999999999
Q ss_pred CCCC
Q psy10566 588 GPHL 591 (604)
Q Consensus 588 ~~~~ 591 (604)
-+.+
T Consensus 337 pI~~ 340 (1081)
T KOG0309|consen 337 PIDS 340 (1081)
T ss_pred eccH
Confidence 8865
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.9e-07 Score=83.95 Aligned_cols=146 Identities=18% Similarity=0.224 Sum_probs=106.1
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccC-------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce--eeEeecccc
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQE-------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL--LRKFQGVTQ 515 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~--~~~~~~~~~ 515 (604)
.++-+...|.|.+|..........+.. .....++.|++.+..++++..+|.+.+.+...... +++.+.|.-
T Consensus 87 ~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~ 166 (339)
T KOG0280|consen 87 NLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEF 166 (339)
T ss_pred eeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccce
Confidence 455566678888887654433222221 11245788899999999999999999766655433 336667766
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC-CCcceEE-eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVK-RELPIAT-LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~-l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
..... .|...+.+++++|++||.+..||++ .++.+.. .+-|...|.++.-+|..+.+++||+.|-.|++||.++-
T Consensus 167 E~Wta--~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm 243 (339)
T KOG0280|consen 167 EAWTA--KFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNM 243 (339)
T ss_pred eeeee--ecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcc
Confidence 54433 3444556899999999999999999 4444444 45688899999999877899999999999999999853
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-08 Score=95.35 Aligned_cols=171 Identities=18% Similarity=0.236 Sum_probs=131.5
Q ss_pred EEEEecC--CCEEEEEecCCeEEEEEcCCCeeeeeec-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-----ccccc
Q psy10566 397 SCSWNRD--GTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL-----TDSNL 468 (604)
Q Consensus 397 ~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~-----~~~~~ 468 (604)
.++|+-+ +-. ++.+.+..|.+-|+++.....|.. ..|.++.|...++.++.|..+|.|..+|++.. .....
T Consensus 216 ~CawSlni~gyh-fs~G~sqqv~L~nvetg~~qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r 294 (425)
T KOG2695|consen 216 SCAWSLNIMGYH-FSVGLSQQVLLTNVETGHQQSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR 294 (425)
T ss_pred hhhhhhccceee-ecccccceeEEEEeecccccccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE
Confidence 3466542 333 556667778888887665555543 35778888888999999999999999999875 34456
Q ss_pred ccCCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCCce---eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 469 LQEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDRIL---LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 469 ~~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
+-|+..|+++..-. ++.+|++.+.+|+|.+||++.-++ +..+.||......+.... .+.+.+|++++.|...+||
T Consensus 295 lyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v-~~eeg~I~s~GdDcytRiW 373 (425)
T KOG2695|consen 295 LYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHV-KEEEGSIFSVGDDCYTRIW 373 (425)
T ss_pred EEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccccccccccc-ccccceEEEccCeeEEEEE
Confidence 67889999998877 788999999999999999987666 999999987655544333 4667788999999999999
Q ss_pred eCCCCcceEEeeCCC----CCeeEEEEcC
Q psy10566 545 HVKRELPIATLSGHT----RTVSCVAWNP 569 (604)
Q Consensus 545 d~~~~~~~~~l~~h~----~~V~~v~~sp 569 (604)
.+++|.++.+++-.. ..+.+++|..
T Consensus 374 sl~~ghLl~tipf~~s~~e~d~~sv~~~s 402 (425)
T KOG2695|consen 374 SLDSGHLLCTIPFPYSASEVDIPSVAFDS 402 (425)
T ss_pred ecccCceeeccCCCCccccccccceehhc
Confidence 999999999887543 3455666643
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.8e-06 Score=77.12 Aligned_cols=238 Identities=14% Similarity=0.120 Sum_probs=135.9
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee-EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLR 384 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~ 384 (604)
.++.+.||+.||.- .|..|.|-...++-.+.... ..-+.....=..++||||+..|+.+...| +|+++|+....+.
T Consensus 2 ~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G--~i~vfdl~g~~lf 78 (282)
T PF15492_consen 2 HLALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTG--TIRVFDLMGSELF 78 (282)
T ss_pred ceeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCC--eEEEEecccceeE
Confidence 46788999988876 57888888776432222111 12222233457899999999999988887 8999999764432
Q ss_pred EEecC------CCCCCeEEEEEecC------CCEEEEEecCCeEEEEEcC---C---Ceeeee--e---ceeEEEEEEcC
Q psy10566 385 VKLNH------SPEDSLTSCSWNRD------GTKFVCGGIRGQFYQCDIE---G---QVLDSW--E---GVRVNCLWCRS 441 (604)
Q Consensus 385 ~~~~~------~~~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~---~---~~~~~~--~---~~~v~~l~~s~ 441 (604)
.+.. .....|..+.|.+- ...|++-..+|.++-|-+. . +....+ . .+.|.++.++|
T Consensus 79 -~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p 157 (282)
T PF15492_consen 79 -VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHP 157 (282)
T ss_pred -EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcC
Confidence 2221 12345677777652 2357777888888777652 1 122222 1 23699999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEE--EEEecCCe------EEEEecCCCceeeEeecc
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA--LLNVSTQG------VHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l--~~~~~dg~------I~lwd~~~~~~~~~~~~~ 513 (604)
..+.|++|+.... ...........+++-.+-.+..+. +....++. -.+|.+-+. +.+...
T Consensus 158 ~h~LLlVgG~~~~---------~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~---~~fs~~ 225 (282)
T PF15492_consen 158 KHRLLLVGGCEQN---------QDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSF---KFFSRQ 225 (282)
T ss_pred CCCEEEEeccCCC---------CCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccce---eeeecc
Confidence 9998888776432 000000111222222222111111 11111111 122322221 112111
Q ss_pred ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT 559 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~ 559 (604)
......|.-+..+|||.+||+.+.+|.|.+|++-+-++.....-++
T Consensus 226 ~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 226 GQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred ccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence 2112233334557999999999999999999999877776665443
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.7e-07 Score=88.71 Aligned_cols=232 Identities=14% Similarity=0.189 Sum_probs=156.6
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-----------CCeEE
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-----------RGQFY 417 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----------dg~i~ 417 (604)
.-+.+.|||.|.||++--..| |.+|--.+-..+.++. |. .|.-+.|||+.++|++-+. ...++
T Consensus 212 Tetyv~wSP~GTYL~t~Hk~G---I~lWGG~~f~r~~RF~--Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~ 285 (698)
T KOG2314|consen 212 TETYVRWSPKGTYLVTFHKQG---IALWGGESFDRIQRFY--HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLI 285 (698)
T ss_pred eeeeEEecCCceEEEEEeccc---eeeecCccHHHHHhcc--CC-CceeeecCCccceEEEecCCccccCcccCCCceEE
Confidence 346789999999999999888 9999877776677765 33 4899999999999998653 24799
Q ss_pred EEEc-CCCeeeeeece-----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEE
Q psy10566 418 QCDI-EGQVLDSWEGV-----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 418 iwd~-~~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~ 490 (604)
|||+ +|...+.+... .-.-+.||.|+++++.-.. ..|.||+..+........ .-..|..+.|+|.+..|+.=
T Consensus 286 IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYw 364 (698)
T KOG2314|consen 286 IWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYW 364 (698)
T ss_pred EEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEE
Confidence 9999 57776666552 2234678999998887666 578899876643222111 23568889999999888754
Q ss_pred ecC-----CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC----------CCcEEEEeCCCCc-ceEE
Q psy10566 491 VST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE----------DGKVYIWHVKREL-PIAT 554 (604)
Q Consensus 491 ~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~----------dg~I~iwd~~~~~-~~~~ 554 (604)
+.. ..+.+..+.+++.+++-.-+.-.... +.|-.+|.+|+.--+ -..+-|+.++... ++..
T Consensus 365 tpe~~~~parvtL~evPs~~~iRt~nlfnVsDck---LhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ 441 (698)
T KOG2314|consen 365 TPETNNIPARVTLMEVPSKREIRTKNLFNVSDCK---LHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEV 441 (698)
T ss_pred cccccCCcceEEEEecCccceeeeccceeeeccE---EEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCcee
Confidence 432 34677777777666655444322212 345577888875321 1235566665433 2333
Q ss_pred eeCCCCCeeEEEEcCCCCcEEEEEeCC--CcEEEECCCC
Q psy10566 555 LSGHTRTVSCVAWNPVYHQMIASVSDD--CTVRIWGPHL 591 (604)
Q Consensus 555 l~~h~~~V~~v~~sp~~~~~l~s~s~D--g~I~iW~~~~ 591 (604)
+. -...|...+|-|.|.++.+..+.+ .++.+|.+.+
T Consensus 442 ve-lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~ 479 (698)
T KOG2314|consen 442 VE-LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVET 479 (698)
T ss_pred ee-cchheeeeeeccCCCeEEEEEccccccceeEEEeec
Confidence 32 457789999999954443333333 5789998885
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.1e-06 Score=82.95 Aligned_cols=214 Identities=8% Similarity=0.081 Sum_probs=148.1
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEEecC-CC----C-----CCeEEEE-Eec-CCCEEEEEecCCeEEEEEc-C
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH-SP----E-----DSLTSCS-WNR-DGTKFVCGGIRGQFYQCDI-E 422 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~-~~----~-----~~v~~~~-~~~-~~~~l~s~~~dg~i~iwd~-~ 422 (604)
+.||+.++..... .|++||..+......-.. .. . .+..-+. |++ +|.+++..+. |...+.+. .
T Consensus 275 nsDGkrIvFq~~G---dIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~ 350 (668)
T COG4946 275 NSDGKRIVFQNAG---DIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWD 350 (668)
T ss_pred CCCCcEEEEecCC---cEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCC
Confidence 4577777764433 599999988654322111 00 0 0111111 344 6777777664 56666666 3
Q ss_pred CCeeeeeeceeEEEEEEcCCCCEEEEEeCCC-eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 423 GQVLDSWEGVRVNCLWCRSDGKSVLAADTHH-RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 423 ~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg-~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
+-.++.-+...|.-..+..+++-++.|..|| .+-+||.++.+...+...-+.|.++..+++|++++++.....+.++|+
T Consensus 351 ~~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vidi 430 (668)
T COG4946 351 GYSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDI 430 (668)
T ss_pred CeeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEe
Confidence 4444444444677778888888899999999 899999999998888888899999999999999999999999999999
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC----cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEE
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG----KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg----~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s 577 (604)
.++.....-+.... .|.-..++|+++++|-+--+| .|+++|+..++....-. ..+.=.+-+|.|+ +++|.-
T Consensus 431 dngnv~~idkS~~~---lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d-~ryLYf 505 (668)
T COG4946 431 DNGNVRLIDKSEYG---LITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTAYDFSPAFDPD-GRYLYF 505 (668)
T ss_pred cCCCeeEecccccc---eeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-CcccccCcccCCC-CcEEEE
Confidence 99866443332222 445566789999999887765 68999999887655433 2333355678888 555543
Q ss_pred E
Q psy10566 578 V 578 (604)
Q Consensus 578 ~ 578 (604)
-
T Consensus 506 L 506 (668)
T COG4946 506 L 506 (668)
T ss_pred E
Confidence 3
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.4e-06 Score=83.49 Aligned_cols=215 Identities=13% Similarity=0.029 Sum_probs=136.9
Q ss_pred eEEEEEECCCceEEEEecCCC-CCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece-eEEEEEEcCCCCEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSP-EDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RVNCLWCRSDGKSVL 447 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~ 447 (604)
++|..||..+|+.+....... .....+ ...+++..+++++.++.+..||. +|+.+-.+... .+... ....+..++
T Consensus 3 g~l~~~d~~tG~~~W~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~~~~~~v~ 80 (238)
T PF13360_consen 3 GTLSALDPRTGKELWSYDLGPGIGGPVA-TAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA-PVVDGGRVY 80 (238)
T ss_dssp SEEEEEETTTTEEEEEEECSSSCSSEEE-TEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG-EEEETTEEE
T ss_pred CEEEEEECCCCCEEEEEECCCCCCCccc-eEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce-eeecccccc
Confidence 389999999999887775322 111111 13346778888899999999998 78776655432 11111 133456677
Q ss_pred EEeCCCeEEEEEcCCCcccccc-cCC----CCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccce-EEE-
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLL-QED----HPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ-FTI- 520 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~-~~~----~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~-~~i- 520 (604)
+++.++.+..+|..+++..... ... ...........+..++++..++.|..+|+++|+.+..+....... ..+
T Consensus 81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 160 (238)
T PF13360_consen 81 VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPIS 160 (238)
T ss_dssp EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EE
T ss_pred cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCccee
Confidence 7778889999998888766552 211 111222233347888999989999999999999988776543221 111
Q ss_pred ------EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 521 ------HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 521 ------~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..... .++ .++.++.+|.+.-+|..+++.+.... ...+..+ ..+. +..++.++.++.|..||+++++
T Consensus 161 ~~~~~~~~~~~-~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~~-~~~~-~~~l~~~~~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 161 SFSDINGSPVI-SDG-RVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYSL-PSVD-GGTLYVTSSDGRLYALDLKTGK 233 (238)
T ss_dssp EETTEEEEEEC-CTT-EEEEECCTSSEEEEETTTTEEEEEEC--SS-ECEC-EECC-CTEEEEEETTTEEEEEETTTTE
T ss_pred eecccccceEE-ECC-EEEEEcCCCeEEEEECCCCCEEEEec--CCCccCC-ceee-CCEEEEEeCCCEEEEEECCCCC
Confidence 11222 244 67777777764444999998665333 2333332 3344 5666666799999999999885
|
... |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.3e-06 Score=87.41 Aligned_cols=258 Identities=12% Similarity=0.010 Sum_probs=152.3
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeE-EEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY-LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~-l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
+..++.++.+|.+..+|.+++ +.+-...... .+.+ ... .+..++.+..++ .+..+|..+|+.+.......
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG----~~~W~~~~~~-~~~ssP~v--~~~~v~v~~~~g--~l~ald~~tG~~~W~~~~~~ 190 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDG----EVAWQTKVAG-EALSRPVV--SDGLVLVHTSNG--MLQALNESDGAVKWTVNLDV 190 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCC----CCcccccCCC-ceecCCEE--ECCEEEEECCCC--EEEEEEccCCCEeeeecCCC
Confidence 445667778999999998733 2222222111 1111 111 134566666676 89999999999887765321
Q ss_pred CCCeEEEEEec--CCCEEEEEecCCeEEEEEc-CCCeeeeeece---------eEEEEEEcC--CCCEEEEEeCCCeEEE
Q psy10566 392 EDSLTSCSWNR--DGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV---------RVNCLWCRS--DGKSVLAADTHHRIRT 457 (604)
Q Consensus 392 ~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~---------~v~~l~~s~--~g~~l~~~~~dg~I~i 457 (604)
........-+| .+..++.++.+|.+..+|. +|+.+-..... +...+..+| .+..+++++.+|.+..
T Consensus 191 ~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~a 270 (394)
T PRK11138 191 PSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVA 270 (394)
T ss_pred CcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEE
Confidence 10000000111 2345777888899888887 45543332110 011111222 3566778888999999
Q ss_pred EEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 458 ~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
+|..+++.......... ..+. ..+..+++++.+|.+..+|..+++.+-......... ..... ..+..|+.++.
T Consensus 271 ld~~tG~~~W~~~~~~~-~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~--~~sp~--v~~g~l~v~~~ 343 (394)
T PRK11138 271 LDLRSGQIVWKREYGSV-NDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRL--LTAPV--LYNGYLVVGDS 343 (394)
T ss_pred EECCCCCEEEeecCCCc-cCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCc--ccCCE--EECCEEEEEeC
Confidence 99988765443322211 1122 246678888899999999999987654432211111 11001 12457888999
Q ss_pred CCcEEEEeCCCCcceEEeeCCCCCeeE-EEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 538 DGKVYIWHVKRELPIATLSGHTRTVSC-VAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 538 dg~I~iwd~~~~~~~~~l~~h~~~V~~-v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
||.|++.|..+|+.+....-....+.+ ..+. +..|+.++.||.|..++.
T Consensus 344 ~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~---~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 344 EGYLHWINREDGRFVAQQKVDSSGFLSEPVVA---DDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCEEEEEECCCCCEEEEEEcCCCcceeCCEEE---CCEEEEEeCCceEEEEeC
Confidence 999999999999998877654333332 2232 346778899999988764
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.9e-08 Score=91.92 Aligned_cols=160 Identities=14% Similarity=0.180 Sum_probs=113.7
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc-ccc---ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC--cee
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD-SNL---LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR--ILL 507 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~-~~~---~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~--~~~ 507 (604)
...+..++.++.++++..+....++++..... ... .......+.+.+..+.....++..-|.++-+|+-+- ...
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~ 144 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC 144 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence 34456778889899998888888888876554 111 112344455666666666666666665555554331 233
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe-eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
..+-||-.. +..+.++||+++|+++..|..|+|-.......+..+ -||+.-|..++.-++ +.|+|+|.|++|++
T Consensus 145 ~~~lGhvSm---l~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~--~~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 145 EPILGHVSM---LLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN--YLLLSGSGDKTLRL 219 (390)
T ss_pred chhhhhhhh---hheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC--ceeeecCCCCcEEE
Confidence 334466553 444566899999999999999999888766666655 479999999999875 56999999999999
Q ss_pred ECCCCCCCCCcc
Q psy10566 587 WGPHLNTNKSPH 598 (604)
Q Consensus 587 W~~~~~~~~~~~ 598 (604)
||+.+++.....
T Consensus 220 Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 220 WDITSGKLLDTC 231 (390)
T ss_pred EecccCCccccc
Confidence 999999865443
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=6e-07 Score=86.17 Aligned_cols=258 Identities=15% Similarity=0.122 Sum_probs=146.0
Q ss_pred ccceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.+..+.+.+|...|..++|||..+ ++..++.+.+|+|.|++ +...+..+..+ ..+.+++|.-|....+.+|..+
T Consensus 183 fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dle----t~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~n 257 (463)
T KOG1645|consen 183 FKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLE----TSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQN 257 (463)
T ss_pred cchhhcccccchhhhhhccCccccceeeeeccCceEEEEecc----cceeeeheecc-CCceeeeeccCCcceeEEeccC
Confidence 444567888999999999999887 78889999999999998 55556666666 7899999999988888877765
Q ss_pred ceEEEEEECCCceEEEEecC--CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEE
Q psy10566 370 CHELWVWNIETELLRVKLNH--SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~ 447 (604)
|.|.+||++..+-...... -...+|..++.-+-...+ +.|..++
T Consensus 258 -G~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f---------------------------------~~gglLv 303 (463)
T KOG1645|consen 258 -GMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIF---------------------------------TSGGLLV 303 (463)
T ss_pred -ceEEEEEccCCCchHhhhhhhhccCcceeecccCccccc---------------------------------cccceEE
Confidence 5899999987543221111 122344444433222111 1111111
Q ss_pred EEeCCCeEEEEEcCC----CcccccccCCCCeeEEEECCCCCEEEEEecCCe-------EE-EEecCCCceeeEee-cc-
Q psy10566 448 AADTHHRIRTYNFEH----LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-------VH-LWDLRDRILLRKFQ-GV- 513 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-------I~-lwd~~~~~~~~~~~-~~- 513 (604)
....+ +..|.... ......+...+...++.+.+..+++++....+- |- --|-.+|.++..-. ++
T Consensus 304 ~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~ 381 (463)
T KOG1645|consen 304 FALTV--LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYF 381 (463)
T ss_pred eeehh--hhhhhhhccccCCCcccccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeeccccc
Confidence 11111 12222211 111112222344455555555555554443210 00 11222332221111 11
Q ss_pred ---ccceEEEEeeeCCCCCcEEEE-EeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC-CCcEEEEEeCCCcEEEEC
Q psy10566 514 ---TQGQFTIHSCFGGANQDFVAS-GSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV-YHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 514 ---~~~~~~i~~~~~~~~~~~l~s-gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~-~~~~l~s~s~Dg~I~iW~ 588 (604)
......-...+-.++.++|+. |.+.+.+.+||..+++.++++.-. .+|.+++.... ++.+|+.-. |..++|+.
T Consensus 382 Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~-epv~Dicp~~~n~~syLa~LT-d~~v~Iyk 459 (463)
T KOG1645|consen 382 GSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLALS-EPVLDICPNDTNGSSYLALLT-DDRVHIYK 459 (463)
T ss_pred CCcccccccccceeccccccEEEEecCCcceeEEeccchhheeeecccC-cceeecceeecCCcchhhhee-cceEEEEe
Confidence 111111112233455566554 445688999999999999998744 78888876543 345666665 55688887
Q ss_pred CCC
Q psy10566 589 PHL 591 (604)
Q Consensus 589 ~~~ 591 (604)
.+.
T Consensus 460 ~es 462 (463)
T KOG1645|consen 460 NES 462 (463)
T ss_pred cCC
Confidence 653
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.1e-08 Score=64.75 Aligned_cols=38 Identities=34% Similarity=0.620 Sum_probs=36.3
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd 329 (604)
++++++.+|.+.|++++|+|++.+|++|+.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46789999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.71 E-value=8.2e-06 Score=78.08 Aligned_cols=216 Identities=16% Similarity=0.124 Sum_probs=132.3
Q ss_pred CCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCS 399 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 399 (604)
+|+|..||.. +++.+-...- -.....+. ..+++..+++++.++ .+..||..+|+.+..+... ..+....
T Consensus 2 ~g~l~~~d~~----tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~--~l~~~d~~tG~~~W~~~~~--~~~~~~~ 72 (238)
T PF13360_consen 2 DGTLSALDPR----TGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDG--NLYALDAKTGKVLWRFDLP--GPISGAP 72 (238)
T ss_dssp TSEEEEEETT----TTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTS--EEEEEETTTSEEEEEEECS--SCGGSGE
T ss_pred CCEEEEEECC----CCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCC--EEEEEECCCCCEEEEeecc--cccccee
Confidence 6788888886 2333333321 11122211 233566777777776 8999999999988777632 2221112
Q ss_pred EecCCCEEEEEecCCeEEEEEc-CCCeeeee-ece----e-EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCC
Q psy10566 400 WNRDGTKFVCGGIRGQFYQCDI-EGQVLDSW-EGV----R-VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472 (604)
Q Consensus 400 ~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~-~~~----~-v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~ 472 (604)
...+..+++++.++.++.+|. +|+.+... ... . ........+++.++++..++.|..+|..+++........
T Consensus 73 -~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~ 151 (238)
T PF13360_consen 73 -VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVG 151 (238)
T ss_dssp -EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESS
T ss_pred -eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecC
Confidence 335667777778889999996 68877663 211 1 122233334888999999999999999988764443321
Q ss_pred C-----------CeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE
Q psy10566 473 H-----------PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541 (604)
Q Consensus 473 ~-----------~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I 541 (604)
. .+..-.+..++ .++++..++.+..+|+.+++.+-... ... ..... ...+..++.++.++.|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~---~~~~~-~~~~~~l~~~~~~~~l 224 (238)
T PF13360_consen 152 EPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP--ISG---IYSLP-SVDGGTLYVTSSDGRL 224 (238)
T ss_dssp TT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC--SS----ECECE-ECCCTEEEEEETTTEE
T ss_pred CCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec--CCC---ccCCc-eeeCCEEEEEeCCCEE
Confidence 1 11222233344 77777777754444999998653222 221 11111 2567788888899999
Q ss_pred EEEeCCCCcceEE
Q psy10566 542 YIWHVKRELPIAT 554 (604)
Q Consensus 542 ~iwd~~~~~~~~~ 554 (604)
..||.++|+.+.+
T Consensus 225 ~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 225 YALDLKTGKVVWQ 237 (238)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCCEEeE
Confidence 9999999987643
|
... |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.8e-08 Score=103.63 Aligned_cols=213 Identities=15% Similarity=0.172 Sum_probs=156.5
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-- 414 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-- 414 (604)
+....++..|+...+|++|+-+.++|+.|+..| .|+++++.+|....... .|.+.|+.+.=+.+|..+++.+.-.
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~~hL~vG~~~G--eik~~nv~sG~~e~s~n-cH~SavT~vePs~dgs~~Ltsss~S~P 1167 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGTNHLAVGSHAG--EIKIFNVSSGSMEESVN-CHQSAVTLVEPSVDGSTQLTSSSSSSP 1167 (1516)
T ss_pred cccchhhhccccceeeEEeecCCceEEeeeccc--eEEEEEccCcccccccc-ccccccccccccCCcceeeeeccccCc
Confidence 344566778899999999999999999999998 89999999998777766 7899999999888998887766544
Q ss_pred eEEEEEcC--CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-cc----CCCCeeEEEECCCCCEE
Q psy10566 415 QFYQCDIE--GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQ----EDHPVMSFTIDATDRLA 487 (604)
Q Consensus 415 ~i~iwd~~--~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~----~~~~i~~~~~s~~~~~l 487 (604)
-..+|++. +....+|.+ -.++.|+..-..-+.|+......+||+.+...... +. ....-+...|+|+..++
T Consensus 1168 lsaLW~~~s~~~~~Hsf~e--d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LI 1245 (1516)
T KOG1832|consen 1168 LSALWDASSTGGPRHSFDE--DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLI 1245 (1516)
T ss_pred hHHHhccccccCccccccc--cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceE
Confidence 46789884 344444443 34666776655566677777899999998765433 21 23344788899999887
Q ss_pred EEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 488 LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
+ .|| .+||.+..+.++.|..... .+. -.|+|+|.-++.-++ |||+++.+.+.....-.. ..|.|
T Consensus 1246 l---ndG--vLWDvR~~~aIh~FD~ft~---~~~-G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~Ldq--c~VtF 1309 (1516)
T KOG1832|consen 1246 L---NDG--VLWDVRIPEAIHRFDQFTD---YGG-GGFHPSGNEVIINSE-----IWDMRTFKLLHSVPSLDQ--CAVTF 1309 (1516)
T ss_pred e---eCc--eeeeeccHHHHhhhhhhee---ccc-ccccCCCceEEeech-----hhhhHHHHHHhcCccccc--eEEEe
Confidence 6 344 5899999888887765442 222 234588988887764 899999888776654332 56677
Q ss_pred cCC
Q psy10566 568 NPV 570 (604)
Q Consensus 568 sp~ 570 (604)
+..
T Consensus 1310 Nst 1312 (1516)
T KOG1832|consen 1310 NST 1312 (1516)
T ss_pred ccC
Confidence 776
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.4e-06 Score=74.04 Aligned_cols=200 Identities=10% Similarity=0.069 Sum_probs=132.7
Q ss_pred EEEEcC-----CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEE-CCCCCeEEEEeCCCceEEEEEECC
Q psy10566 306 FCKFSP-----DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW-SPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 306 ~v~fsp-----dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
.+.|-| ...+||.||.-|...+|...+... .......|...|+-+.= .-..--+..++.|. ++++.+++
T Consensus 72 g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~---h~~~cd~snn~v~~~~r~cd~~~~~~i~sndh--t~k~~~~~ 146 (344)
T KOG4532|consen 72 GMTFTPGSFINKCVTLADGGASGQFDLFACNTNDG---HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDH--TGKTMVVS 146 (344)
T ss_pred cccccchHhhccccEEEeccccceeeeecccCccc---ceeeecccccchhhhhhhcccccceeeccCCc--ceeEEEEe
Confidence 355555 345899999999999999873322 22333334444432211 11223456677787 56666665
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeee-eec---eeEEEEEEcCCCCEEEEEeCCC
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDS-WEG---VRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~-~~~---~~v~~l~~s~~g~~l~~~~~dg 453 (604)
.+........ ..-.+.++++++|++++++.+....|..|.++ +..+.. ... ..-.+..|+.....++++..||
T Consensus 147 ~~s~~~~~h~-~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg 225 (344)
T KOG4532|consen 147 GDSNKFAVHN-QNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDG 225 (344)
T ss_pred cCcccceeec-cccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCC
Confidence 4433222221 11338899999999999999999999999884 333322 111 1355778899999999999999
Q ss_pred eEEEEEcCCCcccc------cccCCCCeeEEEECCCC--CEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 454 RIRTYNFEHLTDSN------LLQEDHPVMSFTIDATD--RLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 454 ~I~i~d~~~~~~~~------~~~~~~~i~~~~~s~~~--~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
++.|||++...... ...|.+.+..+.|++.| .+|+..-.-+.+.+.|++++...+.+.
T Consensus 226 ~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 226 TCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred cEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence 99999998753221 22367889999999866 356666666789999999987655544
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.63 E-value=8e-08 Score=62.77 Aligned_cols=39 Identities=33% Similarity=0.715 Sum_probs=36.7
Q ss_pred CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 549 ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 549 ~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
|+++.++.+|.+.|++++|+|+ +.+|+|++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~-~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPD-GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETT-SSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecc-cccceeeCCCCEEEEEC
Confidence 4678899999999999999999 89999999999999996
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-07 Score=89.19 Aligned_cols=142 Identities=16% Similarity=0.247 Sum_probs=106.2
Q ss_pred EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-----ceeeEeeccccceEEEE
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-----ILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-----~~~~~~~~~~~~~~~i~ 521 (604)
++.+.+..|-+-|++++....+. ..+.|.+..|...+..+..|+.+|.|..+|++.+ .+...+ -|...+.++.
T Consensus 228 fs~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq 305 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQ 305 (425)
T ss_pred ecccccceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhh
Confidence 45566777888898887655444 6788899999999999999999999999999875 223322 2444444444
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcc---eEEeeCCCCCeeE--EEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELP---IATLSGHTRTVSC--VAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~---~~~l~~h~~~V~~--v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+. .++.+|++.+.+|+|++||.+.-++ +.++.||...-.- +..++. ...++++|+|...|||.++.+.
T Consensus 306 ~Lq--~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~e-eg~I~s~GdDcytRiWsl~~gh 379 (425)
T KOG2695|consen 306 ILQ--FSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEE-EGSIFSVGDDCYTRIWSLDSGH 379 (425)
T ss_pred hhc--cccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccc-cceEEEccCeeEEEEEecccCc
Confidence 333 2577899999999999999987666 8888988543332 334555 6788889999999999999765
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.5e-07 Score=93.92 Aligned_cols=243 Identities=13% Similarity=0.223 Sum_probs=160.7
Q ss_pred cEEEEEEcCCCC--eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEEEEECC
Q psy10566 303 EVWFCKFSPDGL--KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 303 ~V~~v~fspdg~--~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~ 379 (604)
.|-.+.|+|... +-++......-.||++.... .......+.+|...|+.+.|+|... .+++++-|. .+..||++
T Consensus 69 ~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss-~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt--~vh~wd~r 145 (1081)
T KOG0309|consen 69 QVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS-SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDT--YVHAWDMR 145 (1081)
T ss_pred hhcceecccCCCCceeEEecCcchhhhhhhhcCC-ccceEEEEecCccceeccccCCCCCcceeeccccc--cceeeecc
Confidence 466677877543 33333344556789987433 2334567889999999999999764 567777787 89999998
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCC-CCEEEEEeCCCe
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSD-GKSVLAADTHHR 454 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~-g~~l~~~~~dg~ 454 (604)
+.....-....-......++|+.....+.+.+....|.+||.+ +..+...+++ .++.+.|..- ...+.+.+.|++
T Consensus 146 Sp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~t 225 (1081)
T KOG0309|consen 146 SPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGT 225 (1081)
T ss_pred CCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCc
Confidence 8654333222334557789999877777777888899999994 5566666665 5666666553 445888999999
Q ss_pred EEEEEcCCC--cccccccCCCCeeEEEECCCCCEEEEEec--CCeEEEE---------ecCC-CceeeEeeccccceEEE
Q psy10566 455 IRTYNFEHL--TDSNLLQEDHPVMSFTIDATDRLALLNVS--TQGVHLW---------DLRD-RILLRKFQGVTQGQFTI 520 (604)
Q Consensus 455 I~i~d~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lw---------d~~~-~~~~~~~~~~~~~~~~i 520 (604)
|+.||.... +....+....+|..-.+.|-|.-..+--. +..+.++ +..+ ..++++|.||...+...
T Consensus 226 vkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eF 305 (1081)
T KOG0309|consen 226 VKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEF 305 (1081)
T ss_pred eeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHH
Confidence 999998764 33445556777877777776543333222 2233333 3322 46788999998754322
Q ss_pred Ee-----eeC--CCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 521 HS-----CFG--GANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 521 ~~-----~~~--~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
.+ +.+ ....-.|++=|.|..+++|-+.+
T Consensus 306 lWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 306 LWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred hhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 11 111 12234789999999999998864
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.7e-07 Score=85.87 Aligned_cols=217 Identities=14% Similarity=0.149 Sum_probs=153.0
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC-CCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD-SSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd-~~~l~s~~~d 368 (604)
.+.+..+..|-+.|.+++.+-+|.++.|++. |..++++|+++ ........+..-.+.+..+ .+|. -..+++.+.-
T Consensus 43 vEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn--~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~ 119 (558)
T KOG0882|consen 43 VEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN--FDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLF 119 (558)
T ss_pred eeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec--cchhhhcccccCCCceEEe-cCCCCeeeeEEeecc
Confidence 3456677889999999999999999999877 99999999982 2221122222222222221 2332 2223444443
Q ss_pred CceEEEEEECCCce-EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-------eeeeee---------c
Q psy10566 369 DCHELWVWNIETEL-LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ-------VLDSWE---------G 431 (604)
Q Consensus 369 ~~~~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~---------~ 431 (604)
..+.+.++|-..+. ....+..-|..+|..+.+++-+..+++....|.|.-|..++. ....++ .
T Consensus 120 ~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K 199 (558)
T KOG0882|consen 120 KSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPK 199 (558)
T ss_pred cCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccc
Confidence 34689999976654 444555568899999999999999999999999999988651 111111 0
Q ss_pred --eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC----------------------------------CCCe
Q psy10566 432 --VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE----------------------------------DHPV 475 (604)
Q Consensus 432 --~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~----------------------------------~~~i 475 (604)
....++.|+|+|..+.+-+.|..|+++++.+++....+.. ...-
T Consensus 200 ~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~ 279 (558)
T KOG0882|consen 200 AKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVG 279 (558)
T ss_pred cccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCccc
Confidence 1467899999999999999999999999987654332211 1234
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
+.+.|+..+++++.++-=| |+++++.++.+++.+-
T Consensus 280 ~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~g 314 (558)
T KOG0882|consen 280 TNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILG 314 (558)
T ss_pred ceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEec
Confidence 5677888999999988766 8999999988777654
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.56 E-value=0.00012 Score=70.88 Aligned_cols=242 Identities=12% Similarity=0.107 Sum_probs=147.8
Q ss_pred EEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-C----CCeeEEEECCCCCeEEEEeCCCc
Q psy10566 306 FCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-T----LGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 306 ~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-~----~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+..||||+.+++++ ..-.|.+||.. +.....-..+... . ......+++.|++++++....-.
T Consensus 40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~--TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa 117 (342)
T PF06433_consen 40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQ--TLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPA 117 (342)
T ss_dssp EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETT--TTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSS
T ss_pred ceeECCCCCEEEEEEEEEeccccccceeEEEEEecC--cCcccceEecCCcchheecccccceEEccCCcEEEEEccCCC
Confidence 467899999887653 23469999998 3333333344431 1 12345788999999998877665
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEc--CCCeeeeeece-------eEEEEEEc
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDI--EGQVLDSWEGV-------RVNCLWCR 440 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~-------~v~~l~~s 440 (604)
.+|.|.|+..++....+... + |....| ....|.+-+.||.+....+ +|+........ -...-++.
T Consensus 118 ~SVtVVDl~~~kvv~ei~~P--G---C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~ 192 (342)
T PF06433_consen 118 TSVTVVDLAAKKVVGEIDTP--G---CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYS 192 (342)
T ss_dssp EEEEEEETTTTEEEEEEEGT--S---EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEE
T ss_pred CeEEEEECCCCceeeeecCC--C---EEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceE
Confidence 68999999999998877632 2 222233 2356888999999988887 46654332111 12233444
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCccccc-----cc--------CCCCeeEEEECCCCCEEEEEecCC----------eEE
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDSNL-----LQ--------EDHPVMSFTIDATDRLALLNVSTQ----------GVH 497 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~~~-----~~--------~~~~i~~~~~s~~~~~l~~~~~dg----------~I~ 497 (604)
..+..++..+.+|.|+-.|+........ .. ..+.-.-+++++..+.|++-...| .|.
T Consensus 193 ~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVW 272 (342)
T PF06433_consen 193 RDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVW 272 (342)
T ss_dssp TTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEE
T ss_pred CCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEE
Confidence 5566677788999999988876532111 10 023345578887776666654322 388
Q ss_pred EEecCCCceeeEeeccccceEEEEeeeCCCCC-cEEEEE-eCCCcEEEEeCCCCcceEEeeCC
Q psy10566 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ-DFVASG-SEDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~sg-s~dg~I~iwd~~~~~~~~~l~~h 558 (604)
+||+.+++.+.++..... ...|. .+.+. .+|++. ..++.+.+||..+|+.+.++..-
T Consensus 273 v~D~~t~krv~Ri~l~~~-~~Si~---Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 273 VYDLKTHKRVARIPLEHP-IDSIA---VSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp EEETTTTEEEEEEEEEEE-ESEEE---EESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred EEECCCCeEEEEEeCCCc-cceEE---EccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 999999999998874322 11232 23343 355544 45899999999999999888743
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.3e-05 Score=79.08 Aligned_cols=262 Identities=9% Similarity=-0.001 Sum_probs=152.1
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC--------Cee-EEEECCCCCeEEEEeCCCceEEEEEECCCceE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL--------GVA-YLAWSPDSSHLLVVGPEDCHELWVWNIETELL 383 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~--------~V~-~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~ 383 (604)
+..+++++.+|.+.-+|..++...+ ...+..... .+. .+.. ++..++.++.++ .+..+|.++|+.
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W--~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g--~l~ald~~tG~~ 142 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIW--SVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKG--QVYALNAEDGEV 142 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEee--EEcCCCcccccccccccccccccEE--ECCEEEEEcCCC--EEEEEECCCCCC
Confidence 4456666677788778876222211 122211000 000 0111 345677777776 899999999998
Q ss_pred EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece-eEEEE--EEcC--CCCEEEEEeCCCeEEE
Q psy10566 384 RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RVNCL--WCRS--DGKSVLAADTHHRIRT 457 (604)
Q Consensus 384 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v~~l--~~s~--~g~~l~~~~~dg~I~i 457 (604)
+.+.... ..+.+--.. .+..+++++.++.+..+|. +|+.+-..... +...+ ..+| .+..++.++.++.+..
T Consensus 143 ~W~~~~~--~~~~ssP~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a 219 (394)
T PRK11138 143 AWQTKVA--GEALSRPVV-SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSA 219 (394)
T ss_pred cccccCC--CceecCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEE
Confidence 7766532 222211111 2456777888999999998 57776555422 10000 0111 2345777888999999
Q ss_pred EEcCCCcccccccCCCC--------eeEEEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 458 YNFEHLTDSNLLQEDHP--------VMSFTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 458 ~d~~~~~~~~~~~~~~~--------i~~~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+|..+++.........+ ...+..+| .+..+++++.+|.+..+|..+++.+-+...... ..+ . .
T Consensus 220 ~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~--~~~--~---~ 292 (394)
T PRK11138 220 VLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSV--NDF--A---V 292 (394)
T ss_pred EEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCc--cCc--E---E
Confidence 99888765443221110 01111122 355677788899999999999987654432111 011 1 2
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC-CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIATLSGHT-RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+..++.++.+|.++.+|..+|+.+.....-. ....+.... +..++.++.||.|.+.|..+++
T Consensus 293 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~---~g~l~v~~~~G~l~~ld~~tG~ 356 (394)
T PRK11138 293 DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLY---NGYLVVGDSEGYLHWINREDGR 356 (394)
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEE---CCEEEEEeCCCEEEEEECCCCC
Confidence 45577788899999999999998765443211 112222232 3467778889999999988876
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.53 E-value=0.00032 Score=67.31 Aligned_cols=205 Identities=16% Similarity=0.088 Sum_probs=133.6
Q ss_pred EEEEEEcC-CCCeEEEEECCCe-EEEEEeCCCCceeEeeEEeccCCCCe--eEEEECCCCCeEEEEeCC---CceEEEEE
Q psy10566 304 VWFCKFSP-DGLKLATGSKDTT-VIIWDVDPVTFTCQHRKTLEGHTLGV--AYLAWSPDSSHLLVVGPE---DCHELWVW 376 (604)
Q Consensus 304 V~~v~fsp-dg~~lasgs~dg~-i~iwd~~~~~~~~~~~~~l~~h~~~V--~~l~~spd~~~l~s~~~d---~~~~i~vw 376 (604)
...++.+| ++..++.+-.-|+ ..+||.. +......+....+.- -.-+||+||++|++.-.| +.+.|-||
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~----~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVy 82 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCR----TGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVY 82 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcC----CCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEE
Confidence 34578888 5557777777665 6788887 333333333222211 135799999999997654 34689999
Q ss_pred ECC-CceEEEEecCCCCCCeEEEEEecCCCEEEEEec------------------CCeEEEEEc-CCCeeeeeec-----
Q psy10566 377 NIE-TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI------------------RGQFYQCDI-EGQVLDSWEG----- 431 (604)
Q Consensus 377 d~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------------------dg~i~iwd~-~~~~~~~~~~----- 431 (604)
|.. +...+..+. .+.-....+.+.|||+.|+++.. +-++...|. +|+.+..+.-
T Consensus 83 d~~~~~~ri~E~~-s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~ 161 (305)
T PF07433_consen 83 DAARGYRRIGEFP-SHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLH 161 (305)
T ss_pred ECcCCcEEEeEec-CCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccc
Confidence 999 555566665 44445678899999988887642 123444444 5776666432
Q ss_pred -eeEEEEEEcCCCCEEEEEeCCCe-------EEEEEcCCC-cc-----cccccCCCCeeEEEECCCCCEEEEEec-CCeE
Q psy10566 432 -VRVNCLWCRSDGKSVLAADTHHR-------IRTYNFEHL-TD-----SNLLQEDHPVMSFTIDATDRLALLNVS-TQGV 496 (604)
Q Consensus 432 -~~v~~l~~s~~g~~l~~~~~dg~-------I~i~d~~~~-~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I 496 (604)
..+..+++.++|..++..-..|. +-+++.... .. .......+.+-++++++++..+++++- .+.+
T Consensus 162 ~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~ 241 (305)
T PF07433_consen 162 QLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRV 241 (305)
T ss_pred ccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEE
Confidence 26999999999987776654432 334433321 00 011123578999999999988866654 6789
Q ss_pred EEEecCCCceeeEeecc
Q psy10566 497 HLWDLRDRILLRKFQGV 513 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~ 513 (604)
.+||..+++.+....-.
T Consensus 242 ~~~d~~tg~~~~~~~l~ 258 (305)
T PF07433_consen 242 AVWDAATGRLLGSVPLP 258 (305)
T ss_pred EEEECCCCCEeeccccC
Confidence 99999999888766543
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=3e-05 Score=81.81 Aligned_cols=202 Identities=20% Similarity=0.209 Sum_probs=140.1
Q ss_pred EEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC-eeEEEECCCCCeEEEEeCCCc---eEEEEEECCCc--
Q psy10566 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG-VAYLAWSPDSSHLLVVGPEDC---HELWVWNIETE-- 381 (604)
Q Consensus 308 ~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~-V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~~-- 381 (604)
+|++.+..+|.|+.+|.|.+.+- ..+....+..+... |..+-...+..+|++.+.|+. ..+++|+++.-
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~-----s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~ 104 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNS-----SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDK 104 (933)
T ss_pred EEcCCCceEEEeeccccEEEecc-----cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCC
Confidence 46778889999999999888874 34555777777777 444443444478888888764 17999998643
Q ss_pred ----eEE---EEec--C-CCCCCeEEEEEecCCCEEEEEecCCeEEEEE--c---CCC-eeeeee-ceeEEEEEEcCCCC
Q psy10566 382 ----LLR---VKLN--H-SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD--I---EGQ-VLDSWE-GVRVNCLWCRSDGK 444 (604)
Q Consensus 382 ----~~~---~~~~--~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd--~---~~~-~~~~~~-~~~v~~l~~s~~g~ 444 (604)
.+. +.+. . ....++.+++.+.+-+.+|+|-.+|.|..+. + .|. ...... ..+|+.+++..+++
T Consensus 105 n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~ 184 (933)
T KOG2114|consen 105 NNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGK 184 (933)
T ss_pred CCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCc
Confidence 222 1121 1 1356789999999999999999999999884 3 122 112222 24899999999999
Q ss_pred EEEEEeCCCeEEEEEcCCCcc-cc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-cccc
Q psy10566 445 SVLAADTHHRIRTYNFEHLTD-SN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-GVTQ 515 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~-~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~-~~~~ 515 (604)
.++.+.....|.+|.+....+ .. .-.++.+..|.++++....+++++. ..+.+||.....+-..|. ++..
T Consensus 185 s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~~g~kk 257 (933)
T KOG2114|consen 185 SVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFEVGEKK 257 (933)
T ss_pred eeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeecCCCeE
Confidence 866666667899999986552 22 2345778888888877665665544 459999988766666666 5544
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.47 E-value=0.00011 Score=74.57 Aligned_cols=261 Identities=13% Similarity=0.097 Sum_probs=143.1
Q ss_pred cCCCCeEEEE---------ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 310 SPDGLKLATG---------SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 310 spdg~~lasg---------s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
|||+++++.. +..+.+.|||++ ++.. ..+......+....|||+|+.++.+... .|++++..+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~--~~~~---~~l~~~~~~~~~~~~sP~g~~~~~v~~~---nly~~~~~~ 72 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIE--TGEI---TPLTPPPPKLQDAKWSPDGKYIAFVRDN---NLYLRDLAT 72 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETT--TTEE---EESS-EETTBSEEEE-SSSTEEEEEETT---EEEEESSTT
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecC--CCce---EECcCCccccccceeecCCCeeEEEecC---ceEEEECCC
Confidence 6888877763 235678899998 3222 2222225678899999999999998765 499999988
Q ss_pred ceEEEEecCCC----------------CCCeEEEEEecCCCEEEEEecC-CeEE--------------------------
Q psy10566 381 ELLRVKLNHSP----------------EDSLTSCSWNRDGTKFVCGGIR-GQFY-------------------------- 417 (604)
Q Consensus 381 ~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~s~~~d-g~i~-------------------------- 417 (604)
+........+. -+.-..+.|+|||++|+....| ..|.
T Consensus 73 ~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G 152 (353)
T PF00930_consen 73 GQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAG 152 (353)
T ss_dssp SEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTT
T ss_pred CCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCC
Confidence 85554333221 1123568899999998876543 2222
Q ss_pred ---------EEEcCCCeeeee--------eceeEEEEEEcCCCCEEEEEeC--C---CeEEEEEcCCCcccccccC--CC
Q psy10566 418 ---------QCDIEGQVLDSW--------EGVRVNCLWCRSDGKSVLAADT--H---HRIRTYNFEHLTDSNLLQE--DH 473 (604)
Q Consensus 418 ---------iwd~~~~~~~~~--------~~~~v~~l~~s~~g~~l~~~~~--d---g~I~i~d~~~~~~~~~~~~--~~ 473 (604)
++|+.+.....+ ...-+..+.|.++++.++..-. + ..+.++|..++........ ..
T Consensus 153 ~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~ 232 (353)
T PF00930_consen 153 DPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDG 232 (353)
T ss_dssp S---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSS
T ss_pred CcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCc
Confidence 223321111110 0124677888888884444322 2 2467777776544333321 22
Q ss_pred C---eeEEEEC-CCCC-EEEEEecCCe--EEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEeCC----CcE
Q psy10566 474 P---VMSFTID-ATDR-LALLNVSTQG--VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGSED----GKV 541 (604)
Q Consensus 474 ~---i~~~~~s-~~~~-~l~~~~~dg~--I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~d----g~I 541 (604)
. .....+. +++. ++.....+|. |++++...+... .+....-.+..+ ..++++++ +.+++..+ ..|
T Consensus 233 Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~-~lT~G~~~V~~i--~~~d~~~~~iyf~a~~~~p~~r~l 309 (353)
T PF00930_consen 233 WVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR-QLTSGDWEVTSI--LGWDEDNNRIYFTANGDNPGERHL 309 (353)
T ss_dssp SSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE-ESS-SSS-EEEE--EEEECTSSEEEEEESSGGTTSBEE
T ss_pred ceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee-ccccCceeeccc--ceEcCCCCEEEEEecCCCCCceEE
Confidence 2 2244443 5554 4555556665 666666666533 333223323232 33345544 44566553 356
Q ss_pred EEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 542 YIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 542 ~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
+.-++..+..+..+....+.-..+.|||++..++.+++.-
T Consensus 310 Y~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~ 349 (353)
T PF00930_consen 310 YRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYSGP 349 (353)
T ss_dssp EEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEESS
T ss_pred EEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEcCC
Confidence 6666663444566665544446999999966666666643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.6e-06 Score=78.56 Aligned_cols=150 Identities=14% Similarity=0.203 Sum_probs=95.3
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCccc-cccc-CCCCeeEEEECCCCCEEEEEec-----CCeEEEEecCCCceeeEee
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDS-NLLQ-EDHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~~~-~~~~i~~~~~s~~~~~l~~~~~-----dg~I~lwd~~~~~~~~~~~ 511 (604)
.+-.++.++++..||.+.+++.+..... ..+. ....-.+.++...++++.++.. -+..+.|+++.. .++.
T Consensus 97 ~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~---~t~~ 173 (319)
T KOG4714|consen 97 CTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPI---KTLI 173 (319)
T ss_pred ccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccc---cccc
Confidence 3445677999999999999998762110 0000 0111222333344555544322 123455555432 2222
Q ss_pred ccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCc-ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 512 GVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKREL-PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~-~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
........+.+.+..|. .+.+++|+.||.+-+||.+... +...+..|+.+|+.|.|+|..+..|+++++||.+--||.
T Consensus 174 ~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 174 PSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred ccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence 22111112444444444 5678889999999999999764 455678899999999999998999999999999999998
Q ss_pred CC
Q psy10566 590 HL 591 (604)
Q Consensus 590 ~~ 591 (604)
.+
T Consensus 254 s~ 255 (319)
T KOG4714|consen 254 ST 255 (319)
T ss_pred CC
Confidence 84
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.1e-06 Score=77.81 Aligned_cols=163 Identities=9% Similarity=0.085 Sum_probs=97.9
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---ceE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---CHE 372 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---~~~ 372 (604)
++..|+++-.+-+.+--++.+++++.||.+.+++.+. ..........-...-.+.+....++.+.+++... ...
T Consensus 84 ~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~---~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~ 160 (319)
T KOG4714|consen 84 VLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDK---DLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDN 160 (319)
T ss_pred eeeccCCCCCcccccccCCceEecCCCceEEEEechH---HHhhhhhcccccccccccceeecccEEecCCcceEeeccc
Confidence 3445555555555555677899999999999999871 1111111111111122233334444444432210 013
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCC--eeeeeece--eEEEEEEcC-CCCEE
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQ--VLDSWEGV--RVNCLWCRS-DGKSV 446 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~--~v~~l~~s~-~g~~l 446 (604)
.+.|+++..+....... ....|++++-+|. ...+++|+.||.+.+||.+.. ....+..| .+..+-|+| ++..|
T Consensus 161 ~~a~~~~p~~t~~~~~~-~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~L 239 (319)
T KOG4714|consen 161 FYANTLDPIKTLIPSKK-ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHL 239 (319)
T ss_pred eeeeccccccccccccc-ccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchhe
Confidence 55666654433222222 2234999999994 456778888999999999642 22222233 688888988 57889
Q ss_pred EEEeCCCeEEEEEcCC
Q psy10566 447 LAADTHHRIRTYNFEH 462 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~ 462 (604)
++++.||.+..||..+
T Consensus 240 ft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 240 FTCSEDGSLWHWDAST 255 (319)
T ss_pred eEecCCCcEEEEcCCC
Confidence 9999999999999765
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=0.00012 Score=80.41 Aligned_cols=236 Identities=14% Similarity=0.188 Sum_probs=146.1
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC----
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE---- 422 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~---- 422 (604)
...|.++.|..+...++.+...| .|.+-|.++......- .....|.+++|+||+..++..+..+++.+-+-+
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G--~iilvd~et~~~eivg--~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i 143 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALG--DIILVDPETLELEIVG--NVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPI 143 (1265)
T ss_pred CcceEEEEEecccceEEEEecCC--cEEEEcccccceeeee--eccCceEEEeecCCCcEEEEEeCCcEEEEEeccccch
Confidence 35799999999999998888888 6888888876543322 245679999999999999999998888765321
Q ss_pred --------------------CCeeeeeece-----------------------eEEEEEEcCCCCEEEEE-----eCCCe
Q psy10566 423 --------------------GQVLDSWEGV-----------------------RVNCLWCRSDGKSVLAA-----DTHHR 454 (604)
Q Consensus 423 --------------------~~~~~~~~~~-----------------------~v~~l~~s~~g~~l~~~-----~~dg~ 454 (604)
|+.-..+.+. .-..+.|--||.++++. .....
T Consensus 144 ~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rk 223 (1265)
T KOG1920|consen 144 AEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRK 223 (1265)
T ss_pred hccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCcee
Confidence 1111122211 12348899999998873 22378
Q ss_pred EEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe---cCCeEEEEecCCCceeeEeeccc-cceEEEEeeeCCCCCc
Q psy10566 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV---STQGVHLWDLRDRILLRKFQGVT-QGQFTIHSCFGGANQD 530 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~I~lwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~ 530 (604)
|++||-+..-........+.-.+++|-|.|..+++-. +++.|.+|.- +|.....|.-.. .....+..+.|..++.
T Consensus 224 irV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~sd 302 (1265)
T KOG1920|consen 224 IRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNSD 302 (1265)
T ss_pred EEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCCC
Confidence 9999987322222222344567899999999888754 3567888874 332222222111 1111144456668888
Q ss_pred EEEE---EeCCCcEEEEeCCCCc--ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 531 FVAS---GSEDGKVYIWHVKREL--PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 531 ~l~s---gs~dg~I~iwd~~~~~--~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
.|+. ......|++|-+.+.. +.+.+....... +.|+|.....+..-..+|...+++.
T Consensus 303 iLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 303 ILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDF 364 (1265)
T ss_pred ceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEEEE
Confidence 8887 4445569999987643 222333222222 7777764444444445565544433
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00046 Score=66.26 Aligned_cols=228 Identities=14% Similarity=0.105 Sum_probs=144.0
Q ss_pred eeEEEECCC-CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCe-EEEEEecCCCEEEEEec-----CCeEEEEEcC
Q psy10566 350 VAYLAWSPD-SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSL-TSCSWNRDGTKFVCGGI-----RGQFYQCDIE 422 (604)
Q Consensus 350 V~~l~~spd-~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~s~~~-----dg~i~iwd~~ 422 (604)
...++.+|. ...++.+-.-| -...+||..++.....+........ -...|++||++|++.-. .|.|-+||..
T Consensus 7 gH~~a~~p~~~~avafaRRPG-~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPG-TFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCC-cEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 456788994 45555555566 3799999999998877653222111 24689999999998644 4799999997
Q ss_pred --CCeeeeeece--eEEEEEEcCCCCEEEEEeC------------------CCeEEEEEcCCCccccc--c---cCCCCe
Q psy10566 423 --GQVLDSWEGV--RVNCLWCRSDGKSVLAADT------------------HHRIRTYNFEHLTDSNL--L---QEDHPV 475 (604)
Q Consensus 423 --~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~------------------dg~I~i~d~~~~~~~~~--~---~~~~~i 475 (604)
-+.+.+|..+ ....+.+.|||+.|+++.. +-.+...|..+++.... + .+...+
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi 165 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI 165 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence 3556666654 4567788999987777632 23455556666554433 2 145578
Q ss_pred eEEEECCCCCEEEEEecCCe-------EEEEecCCCceeeEeeccc----cceEEEEeeeCCCCCcEEEEEe-CCCcEEE
Q psy10566 476 MSFTIDATDRLALLNVSTQG-------VHLWDLRDRILLRKFQGVT----QGQFTIHSCFGGANQDFVASGS-EDGKVYI 543 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~-------I~lwd~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~sgs-~dg~I~i 543 (604)
..+++.++|..++..-..|. |.+++. +..+..+.... .-...+-+++++.++.++++.| ..|.+.+
T Consensus 166 RHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~ 243 (305)
T PF07433_consen 166 RHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAV 243 (305)
T ss_pred eeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEE
Confidence 99999999876655443332 334432 22233332211 1112344455568887775555 5788999
Q ss_pred EeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 544 WHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 544 wd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
||..+++.+....-. .+..++-.++ + +++|.+. |.+.
T Consensus 244 ~d~~tg~~~~~~~l~--D~cGva~~~~-~-f~~ssG~-G~~~ 280 (305)
T PF07433_consen 244 WDAATGRLLGSVPLP--DACGVAPTDD-G-FLVSSGQ-GQLI 280 (305)
T ss_pred EECCCCCEeeccccC--ceeeeeecCC-c-eEEeCCC-ccEE
Confidence 999999988776543 3567777766 3 6666554 4433
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.2e-05 Score=82.29 Aligned_cols=181 Identities=15% Similarity=0.139 Sum_probs=112.8
Q ss_pred EEEEEcCCCCeEEEEE----CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 305 WFCKFSPDGLKLATGS----KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 305 ~~v~fspdg~~lasgs----~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
+-..|+|...+||+++ ..|+|.||--. +....-.+.+-| +++++|+|..-.|+.+-.-+ .+.+|...+
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfadt---GEPqr~Vt~P~h---atSLCWHpe~~vLa~gwe~g--~~~v~~~~~ 90 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFADT---GEPQRDVTYPVH---ATSLCWHPEEFVLAQGWEMG--VSDVQKTNT 90 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEecC---CCCCccccccee---hhhhccChHHHHHhhccccc--eeEEEecCC
Confidence 3457999999888876 46889888532 222222222223 56799999876666655555 899999877
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeee----e--ece-eEEEEEEcCCCCE------
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDS----W--EGV-RVNCLWCRSDGKS------ 445 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~----~--~~~-~v~~l~~s~~g~~------ 445 (604)
.+.. .....|..+|..+.|+++|..++++..-|.+.+|..+ |+.... . ..+ ...|...++++.-
T Consensus 91 ~e~h-tv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laK 169 (1416)
T KOG3617|consen 91 TETH-TVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAK 169 (1416)
T ss_pred ceee-eeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhh
Confidence 6644 4445788999999999999999999999999999775 432111 0 111 3445555666321
Q ss_pred EEEEeCCCeEE-EEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 446 VLAADTHHRIR-TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 446 l~~~~~dg~I~-i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
.++.+.+..+- .++.+......... -.-.|+|..+++++.+|+|+-.|-
T Consensus 170 aaVtgDe~alD~~fnwk~~~a~rs~~-------ksgv~~g~~F~~~~~~GtVyyvdq 219 (1416)
T KOG3617|consen 170 AAVTGDESALDEPFNWKESLAERSDE-------KSGVPKGTEFLFAGKSGTVYYVDQ 219 (1416)
T ss_pred hhccCchhhhcccccCccchhhcccc-------ccCCCCCcEEEEEcCCceEEEEcC
Confidence 22223332222 33332211111111 112468888999999999988884
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.1e-05 Score=77.48 Aligned_cols=119 Identities=18% Similarity=0.203 Sum_probs=87.9
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
|...|.--+++..+++++.|+.-|.+++|+-. .+.. ......+..+.+..++.|++..++++++..+ .|.++-++
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~--~~~~-~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g--~V~v~ql~ 106 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRH--TGEM-RKLKNEGATGITCVRSVSSVEYLVAAGTASG--RVSVFQLN 106 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecC--chhh-hcccccCccceEEEEEecchhHhhhhhcCCc--eEEeehhh
Confidence 44566667788889999999999999999976 2211 1222333445566777888887777777666 88888876
Q ss_pred Cce-----EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q psy10566 380 TEL-----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423 (604)
Q Consensus 380 ~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 423 (604)
.+. ........|...|++++|++++..+++|...|+|..-.++.
T Consensus 107 ~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 107 KELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 643 22333345678999999999999999999999999887765
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.0003 Score=77.35 Aligned_cols=198 Identities=19% Similarity=0.252 Sum_probs=132.0
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC--
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI-- 378 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~-- 378 (604)
.+.|.++.|-.++.-++.+..+|.|.+-|.. +.....+.. -..+|.+++||||.+.++..+..+ ++.+-+-
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~e--t~~~eivg~---vd~GI~aaswS~Dee~l~liT~~~--tll~mT~~f 140 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPE--TLELEIVGN---VDNGISAASWSPDEELLALITGRQ--TLLFMTKDF 140 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccc--ccceeeeee---ccCceEEEeecCCCcEEEEEeCCc--EEEEEeccc
Confidence 3689999999999988888899999998876 333333322 457899999999999999988876 4443321
Q ss_pred --CC-------------------ceEEEEecCC--------------------CCCCeEEEEEecCCCEEEEEe-----c
Q psy10566 379 --ET-------------------ELLRVKLNHS--------------------PEDSLTSCSWNRDGTKFVCGG-----I 412 (604)
Q Consensus 379 --~~-------------------~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~s~~-----~ 412 (604)
-. |+....+... ..+.=+++.|--||.+|++.. .
T Consensus 141 ~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~ 220 (1265)
T KOG1920|consen 141 EPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETG 220 (1265)
T ss_pred cchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCC
Confidence 00 1111111100 011124589999999999832 2
Q ss_pred CCeEEEEEcCCCeeeeee--ceeEEEEEEcCCCCEEEEEe---CCCeEEEEEcCCCccccc---cc-CCCCeeEEEECCC
Q psy10566 413 RGQFYQCDIEGQVLDSWE--GVRVNCLWCRSDGKSVLAAD---THHRIRTYNFEHLTDSNL---LQ-EDHPVMSFTIDAT 483 (604)
Q Consensus 413 dg~i~iwd~~~~~~~~~~--~~~v~~l~~s~~g~~l~~~~---~dg~I~i~d~~~~~~~~~---~~-~~~~i~~~~~s~~ 483 (604)
...|++||-+|..-..-. ...-.+++|-|.|..+++.. +++.|.+|.-+..+-... .. ...++..++|+.+
T Consensus 221 ~RkirV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~ 300 (1265)
T KOG1920|consen 221 TRKIRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSN 300 (1265)
T ss_pred ceeEEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCC
Confidence 379999998854322211 12356789999999888764 456788888665433221 11 2344899999999
Q ss_pred CCEEEE---EecCCeEEEEecCCCc
Q psy10566 484 DRLALL---NVSTQGVHLWDLRDRI 505 (604)
Q Consensus 484 ~~~l~~---~~~dg~I~lwd~~~~~ 505 (604)
+..|++ ......|++|-+.+..
T Consensus 301 sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 301 SDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred CCceeeeecccccceEEEEEecCeE
Confidence 999988 4445569999887753
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.4e-05 Score=81.86 Aligned_cols=182 Identities=13% Similarity=0.144 Sum_probs=130.5
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCC
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~ 472 (604)
..++|++++ ++.|+.|+.+|.|++++..+.. +....+... ..+|.++++++.||+|.|..+-+..........
T Consensus 40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~ 112 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS----ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFK 112 (846)
T ss_pred hHHHHHHhh--cceeeeccccceEEEEecCCcc-ccccccccc----ccCCceEEEecCCCcEEEeeccCCccceeEecC
Confidence 446666664 6789999999999999998876 332222211 668999999999999999999998888888888
Q ss_pred CCeeEEEECCC-----CCEEEEEecCCeEEEEecCCCceee--EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 473 HPVMSFTIDAT-----DRLALLNVSTQGVHLWDLRDRILLR--KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 473 ~~i~~~~~s~~-----~~~l~~~~~dg~I~lwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
.++.+++++|+ .+.+++|+..| +.++.-+--.... ......+ .|.++.| .|++||=++++| |+|||
T Consensus 113 rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG---~I~~i~W--~g~lIAWand~G-v~vyd 185 (846)
T KOG2066|consen 113 RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEG---PIHSIKW--RGNLIAWANDDG-VKVYD 185 (846)
T ss_pred CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCcc---ceEEEEe--cCcEEEEecCCC-cEEEe
Confidence 99999999998 57788998888 7777533211111 1222223 4444544 578999988777 89999
Q ss_pred CCCCcceEEeeCCCCC------eeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 546 VKRELPIATLSGHTRT------VSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 546 ~~~~~~~~~l~~h~~~------V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+.+++.+..++..... ...+.|.++ . .|+.| ...+|+|..++.
T Consensus 186 ~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~-~-~LVIG-W~d~v~i~~I~~ 234 (846)
T KOG2066|consen 186 TPTRQRLTNIPPPSQSVRPELFPPHLHWQDE-D-RLVIG-WGDSVKICSIKK 234 (846)
T ss_pred ccccceeeccCCCCCCCCcccCCCceEecCC-C-eEEEe-cCCeEEEEEEec
Confidence 9998888777654333 346788876 3 44443 344688888873
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00036 Score=73.17 Aligned_cols=183 Identities=10% Similarity=0.013 Sum_probs=116.3
Q ss_pred ECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC----eEEEEEcCC-Ceeeee
Q psy10566 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG----QFYQCDIEG-QVLDSW 429 (604)
Q Consensus 355 ~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~-~~~~~~ 429 (604)
++|||+.+...+... +.+.+.|.++.+....+... .....++++|+|+++++.+.+. ++...+... ..+..+
T Consensus 200 lpnDGk~l~~~~ey~-~~vSvID~etmeV~~qV~Vd--gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvf 276 (635)
T PRK02888 200 LPNDGKDLDDPKKYR-SLFTAVDAETMEVAWQVMVD--GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVF 276 (635)
T ss_pred cCCCCCEeeccccee-EEEEEEECccceEEEEEEeC--CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEE
Confidence 344555443332222 46778888887776666533 3456789999999998887432 233332211 111111
Q ss_pred eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCC-----CcccccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCC
Q psy10566 430 EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEH-----LTDSNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRD 503 (604)
Q Consensus 430 ~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~-----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~ 503 (604)
.-..+ -.+.++|++... .++.|.+.|..+ ......+........+.++|||+++++++. +++|.++|+.+
T Consensus 277 ni~~i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k 352 (635)
T PRK02888 277 NIARI--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRK 352 (635)
T ss_pred chHHH--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence 10000 134567877665 367899999988 455666667888899999999999888766 88999999987
Q ss_pred Cce------------eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 504 RIL------------LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 504 ~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
.+. +....- +...+.. .|..+|+...|-.-|..|..||+.+
T Consensus 353 ~k~~~~~~~~~~~~vvaevev---GlGPLHT-aFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 353 LDDLFDGKIKPRDAVVAEPEL---GLGPLHT-AFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hhhhhhccCCccceEEEeecc---CCCcceE-EECCCCCEEEeEeecceeEEEehHH
Confidence 542 222221 1112332 3357888888888899999999875
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.0017 Score=66.57 Aligned_cols=72 Identities=18% Similarity=0.380 Sum_probs=59.8
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+.++..+|+...++.|+.||.|.+||...+.. .+....-.++.++|||+ +.++++|+.-|.+.+||+.-..
T Consensus 261 ~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~-gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 261 QVICCARSPSEDKLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPD-GAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred cceEEecCcccceEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEcCC-CcEEEEEcCCceEEEEEeecCc
Confidence 456677889999999999999999999887633 33344556789999999 8999999999999999997654
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.1e-05 Score=80.23 Aligned_cols=179 Identities=13% Similarity=0.170 Sum_probs=122.1
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
.+.++|++++ +++|+-|+.+|.|++.+.. +.. .+...|... ..+|.++++|+.|| +|.+-.+-+
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~-----~~~-~~~~~~s~~------~~~Gey~asCS~DG--kv~I~sl~~ 102 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQ-----GNP-KTNFDHSSS------ILEGEYVASCSDDG--KVVIGSLFT 102 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecC-----Ccc-ccccccccc------ccCCceEEEecCCC--cEEEeeccC
Confidence 4678888887 6799999999999999986 122 333334433 66899999999999 899998888
Q ss_pred ceEEEEecCCCCCCeEEEEEecC-----CCEEEEEecCCeEEEEEcC--CC--ee-eeeeceeEEEEEEcCCCCEEEEEe
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRD-----GTKFVCGGIRGQFYQCDIE--GQ--VL-DSWEGVRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~s~~~dg~i~iwd~~--~~--~~-~~~~~~~v~~l~~s~~g~~l~~~~ 450 (604)
.+....+. ...++.+++++|+ .+.+++||..| +.++.-+ |. .+ ..-....|.++.|. |+.++-++
T Consensus 103 ~~~~~~~d--f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWan 177 (846)
T KOG2066|consen 103 DDEITQYD--FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWAN 177 (846)
T ss_pred CccceeEe--cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEec
Confidence 87766655 4478999999997 67899999998 7776542 21 11 11112367777775 55555555
Q ss_pred CCCeEEEEEcCCCcccccccCC-------CCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 451 THHRIRTYNFEHLTDSNLLQED-------HPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~~~~-------~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
|-.|++||..+......+... .-...+.|.++. .++.|-. .+|++..++.
T Consensus 178 -d~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~-d~v~i~~I~~ 234 (846)
T KOG2066|consen 178 -DDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWG-DSVKICSIKK 234 (846)
T ss_pred -CCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecC-CeEEEEEEec
Confidence 445899999887665554432 223456666554 4555544 4588888773
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.0015 Score=59.89 Aligned_cols=262 Identities=13% Similarity=0.090 Sum_probs=129.8
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCee-EEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA-YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~-~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~ 390 (604)
-|++++.|++.|.+++-+++ ++.....+..-. .|. .....+++..+..++.|+ ..+..|..+..++.+..-+
T Consensus 62 vgdfVV~GCy~g~lYfl~~~----tGs~~w~f~~~~-~vk~~a~~d~~~glIycgshd~--~~yalD~~~~~cVykskcg 134 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVK----TGSQIWNFVILE-TVKVRAQCDFDGGLIYCGSHDG--NFYALDPKTYGCVYKSKCG 134 (354)
T ss_pred ECCEEEEEEccCcEEEEEec----chhheeeeeehh-hhccceEEcCCCceEEEecCCC--cEEEecccccceEEecccC
Confidence 36788999999999999998 332233332211 121 233567888888999998 8999999999888876532
Q ss_pred CCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece----eEEE--EEEcCCCCEEEEEeCCCeEEEEEcCCCc
Q psy10566 391 PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV----RVNC--LWCRSDGKSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~v~~--l~~s~~g~~l~~~~~dg~I~i~d~~~~~ 464 (604)
.+...+-+..|-...+..+...|.+.--..+......+-.+ ++.. +++ +..+..+.-||.+.-+| ..++
T Consensus 135 -G~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~splcv---~~sv~i~~VdG~l~~f~-~sG~ 209 (354)
T KOG4649|consen 135 -GGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWAATRFGPIFASPLCV---GSSVIITTVDGVLTSFD-ESGR 209 (354)
T ss_pred -CceeccceecCCCceEEEEeccceEEEEccCCCCcceehhhhcCCccccCceec---cceEEEEEeccEEEEEc-CCCc
Confidence 22233344555333444455555544433321111111000 1100 011 22233334444444444 2222
Q ss_pred ccccccCCCCeeE-EEEC-CCCCEEEEEecC--------CeEEEEecCCCceeeEeeccccceEEEEeeeCCC---CCcE
Q psy10566 465 DSNLLQEDHPVMS-FTID-ATDRLALLNVST--------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA---NQDF 531 (604)
Q Consensus 465 ~~~~~~~~~~i~~-~~~s-~~~~~l~~~~~d--------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~ 531 (604)
........++|.. -+.+ |..+.+..+..+ ..-.+|..++|...+.+...+ +++.+.++ ..++
T Consensus 210 qvwr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~-----l~F~~h~~~~S~~~l 284 (354)
T KOG4649|consen 210 QVWRPATKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQSGTTLHVYLSPK-----LRFDLHSPGISYPKL 284 (354)
T ss_pred EEEeecCCCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecCCcEEEEEeCcc-----cceeccCCCCcchhh
Confidence 2222222222211 0111 222222222222 223466666664444443221 12222222 2457
Q ss_pred EEEEeCCCcEEEEeCCCCcceEEeeCCCCCe---eEEEE------cCC-CCcEEEEEeCCCcEEEECCCCC
Q psy10566 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTV---SCVAW------NPV-YHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V---~~v~~------sp~-~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+..++.||++.|.-.+. .+.....|.+.+ ..+.. +|- =+..|+.|+.|..|+-||+.+.
T Consensus 285 l~~~s~dgkv~il~~~~--sl~~~~s~~g~lq~~~~~el~~eIFsSPvii~grl~igcRDdYv~cldl~~~ 353 (354)
T KOG4649|consen 285 LRRSSGDGKVMILMTSK--SLAEISSNGGELQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYVRCLDLDTW 353 (354)
T ss_pred hhhhcCCCcEEEEEecc--cccccccCCCccceEEEeecCcccccCCeEEccEEEEEEccCeEEEEecccc
Confidence 88888999998875442 244444444332 22222 221 0235778889999999999864
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.7e-05 Score=79.95 Aligned_cols=228 Identities=15% Similarity=0.183 Sum_probs=135.1
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC-ce
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-EL 382 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~-~~ 382 (604)
+++++|+|..-.||.|-.-|.+.+|... ..+.......|..+|..+.|||+|..++++..-| .+.+|...- |+
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~----~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g--~v~lwr~d~~g~ 135 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTN----TTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPG--SVHLWRYDVIGE 135 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecC----CceeeeeccCCCCCceeEEecCCCCeEEEcCCCc--eeEEEEeeeccc
Confidence 5679999998899999999999999987 4444455566999999999999999999988877 788886541 11
Q ss_pred -----------------EEEEecCC--------------CCCCeE-EEEE-------------ecCCCEEEEEecCCeEE
Q psy10566 383 -----------------LRVKLNHS--------------PEDSLT-SCSW-------------NRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 383 -----------------~~~~~~~~--------------~~~~v~-~~~~-------------~~~~~~l~s~~~dg~i~ 417 (604)
+..++... ....+. -..| .|+|..|+.++.+|+|+
T Consensus 136 ~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~rs~~ksgv~~g~~F~~~~~~GtVy 215 (1416)
T KOG3617|consen 136 IQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLAERSDEKSGVPKGTEFLFAGKSGTVY 215 (1416)
T ss_pred cccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchhhccccccCCCCCcEEEEEcCCceEE
Confidence 00111100 000010 0011 35778899999999999
Q ss_pred EEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEc------------------------------CC---Cc
Q psy10566 418 QCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNF------------------------------EH---LT 464 (604)
Q Consensus 418 iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~------------------------------~~---~~ 464 (604)
-.|-.|+.....+...-..+-|.+....+++...+-++.++-. .. ..
T Consensus 216 yvdq~g~~~~V~k~dS~vQmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGvLr~~ 295 (1416)
T KOG3617|consen 216 YVDQNGRQRTVHKLDSEVQMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGVLRKS 295 (1416)
T ss_pred EEcCCCcEEEEEEccchHHHHHhcccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCccccccccccccCC
Confidence 8887776554433211101111111111111111111111111 00 01
Q ss_pred ccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-------ceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-------ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
...-+..+..+.|++++..+..+..|...|.+.+|--... .-...+.+.......|+.+-|+|-...++.-+.
T Consensus 296 eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~~avn~~ 375 (1416)
T KOG3617|consen 296 EKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKSTAAVNTE 375 (1416)
T ss_pred cchhhhcCCceEEEEEeccceEEEecccCCcEEEeeecCccccCCCCcceEEecCchhhccceEEEEeccccchhhhhhh
Confidence 1111223567999999999999999999999999953221 223445555555556777777775555554443
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00011 Score=77.56 Aligned_cols=192 Identities=9% Similarity=0.138 Sum_probs=127.8
Q ss_pred EEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--e-EEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCccc----
Q psy10566 399 SWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--R-VNCLWCRSDGKSVLAADTHH-----RIRTYNFEHLTDS---- 466 (604)
Q Consensus 399 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~-v~~l~~s~~g~~l~~~~~dg-----~I~i~d~~~~~~~---- 466 (604)
+|++.+..++.|+.+|.|.+.+-.-+.+..|..+ . +..+....+.+.+++.+.|+ .+++||++.....
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~ 109 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQ 109 (933)
T ss_pred EEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcc
Confidence 5678899999999999999998877776666654 3 55555555667787777664 4899999764211
Q ss_pred -----cccc-----CCCCeeEEEECCCCCEEEEEecCCeEEEEecC--CCceeeEeeccccceEEEEeeeCCCCCcEEEE
Q psy10566 467 -----NLLQ-----EDHPVMSFTIDATDRLALLNVSTQGVHLWDLR--DRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534 (604)
Q Consensus 467 -----~~~~-----~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 534 (604)
.+.. ...++.+++++.+-+.+++|..+|.|..+.-. ..+-.+.-..|. +..+|+.+++..++..++-
T Consensus 110 c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~-~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 110 CLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHR-GKEPITGLALRSDGKSVLF 188 (933)
T ss_pred eeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeecc-CCCCceeeEEecCCceeEE
Confidence 1111 25678999999999999999999999998532 111111111222 2224444454456655333
Q ss_pred EeCCCcEEEEeCCCCcc-eEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 535 GSEDGKVYIWHVKRELP-IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 535 gs~dg~I~iwd~~~~~~-~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
......|.+|.+....+ ...+..|..+++|..+++. ...++.|+ +..+.+|+.+...
T Consensus 189 v~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~-t~qfIca~-~e~l~fY~sd~~~ 246 (933)
T KOG2114|consen 189 VATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDG-TYQFICAG-SEFLYFYDSDGRG 246 (933)
T ss_pred EEecceeEEEEecCCCcceeeeccCCccceeeecCCC-CccEEEec-CceEEEEcCCCcc
Confidence 33455789999884333 4557788889999999987 44455544 3458899887543
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.0025 Score=61.98 Aligned_cols=262 Identities=11% Similarity=0.163 Sum_probs=149.7
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--------CceEEEEEECCCceEEEEecCCCC--
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--------DCHELWVWNIETELLRVKLNHSPE-- 392 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--------~~~~i~vwd~~~~~~~~~~~~~~~-- 392 (604)
+.+.|+|.+ +.+.+..+.. +-.-.+..+|+++.+.+++.- .+-.|.+||..+-.....+.....
T Consensus 17 ~rv~viD~d----~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R 90 (342)
T PF06433_consen 17 SRVYVIDAD----SGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPR 90 (342)
T ss_dssp EEEEEEETT----TTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B
T ss_pred ceEEEEECC----CCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcch
Confidence 478888887 3333444332 223346689999998876431 111699999999877665543322
Q ss_pred ----CCeEEEEEecCCCEEEEEec--CCeEEEEEcCC-CeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCC-Cc
Q psy10566 393 ----DSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEG-QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEH-LT 464 (604)
Q Consensus 393 ----~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~-~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~-~~ 464 (604)
......+++.|++++++... -..|.+.|+.. +.+..+.-.....+.-+. ...+.+.+.||.+....+.. ++
T Consensus 91 ~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~-~~~F~~lC~DGsl~~v~Ld~~Gk 169 (342)
T PF06433_consen 91 AQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSG-NRGFSMLCGDGSLLTVTLDADGK 169 (342)
T ss_dssp --BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEE-TTEEEEEETTSCEEEEEETSTSS
T ss_pred heecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecC-CCceEEEecCCceEEEEECCCCC
Confidence 11234677888888777544 35788888854 444444433222222222 34588888999988888874 22
Q ss_pred ccc----ccc-CCCC-eeEEEECCCCCEEEEEecCCeEEEEecCCCce--eeEeecc---------ccceEEEEeeeCCC
Q psy10566 465 DSN----LLQ-EDHP-VMSFTIDATDRLALLNVSTQGVHLWDLRDRIL--LRKFQGV---------TQGQFTIHSCFGGA 527 (604)
Q Consensus 465 ~~~----~~~-~~~~-i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~--~~~~~~~---------~~~~~~i~~~~~~~ 527 (604)
... .+. ...+ +..-++...+..++..+.+|.|+-.|+..... ...+.-. ..+.+.+. .+..+
T Consensus 170 ~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~-A~~~~ 248 (342)
T PF06433_consen 170 EAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLI-AYHAA 248 (342)
T ss_dssp EEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-E-EEETT
T ss_pred EeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeee-eeccc
Confidence 221 111 1222 23444555666667678889999988876532 1222110 01111111 12223
Q ss_pred CCcEEEEEe--CCC-------cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE-eCCCcEEEECCCCCC
Q psy10566 528 NQDFVASGS--EDG-------KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV-SDDCTVRIWGPHLNT 593 (604)
Q Consensus 528 ~~~~l~sgs--~dg-------~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~-s~Dg~I~iW~~~~~~ 593 (604)
.+++.+.-. .+| .|.++|+.+++.+..+.. ..++.+|..+.+...+|++. ..++.+.+||..+++
T Consensus 249 ~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 249 SGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGK 323 (342)
T ss_dssp TTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--
T ss_pred cCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCc
Confidence 444443322 121 488889999999999874 34588999998866677655 458999999999986
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.0076 Score=59.90 Aligned_cols=273 Identities=15% Similarity=0.102 Sum_probs=128.2
Q ss_pred EEcCCCCeEEE-EECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 308 KFSPDGLKLAT-GSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 308 ~fspdg~~las-gs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
+|.+||+.|+. +..||.-.+|-++-.++....+....+ .......++|+++.++...... .++..|+++.+....
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g--~~~~g~~~s~~~~~~~Yv~~~~--~l~~vdL~T~e~~~v 117 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG--DNTFGGFLSPDDRALYYVKNGR--SLRRVDLDTLEERVV 117 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS---B-TTT-EE-TTSSEEEEEETTT--EEEEEETTT--EEEE
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCC--CCccceEEecCCCeEEEEECCC--eEEEEECCcCcEEEE
Confidence 57889975554 445776555554422444333322221 2233567789999887766555 799999999876544
Q ss_pred ecCCCCCCeEEEEEec--CCCEEEEEec----------------------CCeEEEEEcC-CCeeeeeec-eeEEEEEEc
Q psy10566 387 LNHSPEDSLTSCSWNR--DGTKFVCGGI----------------------RGQFYQCDIE-GQVLDSWEG-VRVNCLWCR 440 (604)
Q Consensus 387 ~~~~~~~~v~~~~~~~--~~~~l~s~~~----------------------dg~i~iwd~~-~~~~~~~~~-~~v~~l~~s 440 (604)
+. .....+-...|.. ++..++-.-. ...|.-.|+. |+.-..+.. .-+..+.|+
T Consensus 118 y~-~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fs 196 (386)
T PF14583_consen 118 YE-VPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFS 196 (386)
T ss_dssp EE---TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEE
T ss_pred EE-CCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccC
Confidence 43 2344454456643 4555433211 1123333443 332222222 246778888
Q ss_pred CCCCEEEEEeCCC-----eEEEEEcCC--CcccccccC--CCCeeEEEECCCCCEEEEEec-----CCeEEEEecCCCce
Q psy10566 441 SDGKSVLAADTHH-----RIRTYNFEH--LTDSNLLQE--DHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRDRIL 506 (604)
Q Consensus 441 ~~g~~l~~~~~dg-----~I~i~d~~~--~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~-----dg~I~lwd~~~~~~ 506 (604)
|....+++-+..| .-+||-+++ .....+..+ ...+..=-|.|+|..+..-+. +..|.-+|+.+++.
T Consensus 197 P~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~ 276 (386)
T PF14583_consen 197 PTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGER 276 (386)
T ss_dssp TTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--E
T ss_pred CCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCc
Confidence 8766665554433 124554443 322222222 334556678999987765332 33577788888765
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCCC----------------cEEEEeCCCCcceEE---------eeCCCC-
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG----------------KVYIWHVKRELPIAT---------LSGHTR- 560 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg----------------~I~iwd~~~~~~~~~---------l~~h~~- 560 (604)
........ +.. ...+++|++++-=+.|. .|++++...+..... +.+|..
T Consensus 277 ~~~~~~p~----~~H-~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~ 351 (386)
T PF14583_consen 277 RRLMEMPW----CSH-FMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQV 351 (386)
T ss_dssp EEEEEE-S----EEE-EEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSST
T ss_pred eEEEeCCc----eee-eEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCcc
Confidence 43322211 222 23358888876544432 567788877654321 122211
Q ss_pred CeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 561 TVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 561 ~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.=....|+||+..+|.++...|...||-++
T Consensus 352 ~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 352 THPHPSFSPDGKWVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp T----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred CCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence 124679999977788888889988887543
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.15 E-value=8.6e-05 Score=76.33 Aligned_cols=194 Identities=22% Similarity=0.254 Sum_probs=127.4
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEE---CC-CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGS---KD-TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs---~d-g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~ 367 (604)
...+.+..-...+..-+|+|+++.++..+ .. ..+.+++++ .+....+..+.++.. .-+|+|||+.|+.+..
T Consensus 183 ~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~--~g~~~~i~~~~g~~~---~P~fspDG~~l~f~~~ 257 (425)
T COG0823 183 YNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLN--TGKRPVILNFNGNNG---APAFSPDGSKLAFSSS 257 (425)
T ss_pred cceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEecc--CCccceeeccCCccC---CccCCCCCCEEEEEEC
Confidence 34445555566788889999999766553 22 358889988 444444555555543 4589999998877654
Q ss_pred -CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---eEEEEEcCCCeeeeeec--eeEEEEEEcC
Q psy10566 368 -EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---QFYQCDIEGQVLDSWEG--VRVNCLWCRS 441 (604)
Q Consensus 368 -d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~--~~v~~l~~s~ 441 (604)
++...|++.|+.++.... +.. ..+.-+.=.|+|||+.++..+..+ .|.+++.++........ ..-..-.++|
T Consensus 258 rdg~~~iy~~dl~~~~~~~-Lt~-~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~Sp 335 (425)
T COG0823 258 RDGSPDIYLMDLDGKNLPR-LTN-GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSP 335 (425)
T ss_pred CCCCccEEEEcCCCCccee-ccc-CCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCC
Confidence 555579999998887444 332 222233678999999988876654 57777887765544432 2233678899
Q ss_pred CCCEEEEEeCC-Ce--EEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec
Q psy10566 442 DGKSVLAADTH-HR--IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 442 ~g~~l~~~~~d-g~--I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
||++++..+.. |. |.+.|..+......+........-.+.++++.++..+.
T Consensus 336 dG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 336 DGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSG 389 (425)
T ss_pred CCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEecc
Confidence 99998887753 43 66666665554444555555556677777777665544
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00054 Score=71.90 Aligned_cols=223 Identities=9% Similarity=0.029 Sum_probs=121.4
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe--cCCCEEEEEec-------CCeEEEEEcC--CCee
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN--RDGTKFVCGGI-------RGQFYQCDIE--GQVL 426 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~-------dg~i~iwd~~--~~~~ 426 (604)
||++++.-...+ .+|-..++..-++...+.......+..+.|- |+..++++++. ||.. +.+.+ ...+
T Consensus 140 dGr~~findk~n-~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~-l~~~~ey~~~v 217 (635)
T PRK02888 140 DGRYLFINDKAN-TRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKD-LDDPKKYRSLF 217 (635)
T ss_pred ceeEEEEecCCC-cceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCE-eecccceeEEE
Confidence 677888766544 3666677766665544444445556666665 66677776653 3321 11111 1111
Q ss_pred eeeece---eEEEEEEcCCCCEEEEEeCCCeEEEEEc---CCCcccccccCCCCeeEEEE--------CCCCCEEEEEec
Q psy10566 427 DSWEGV---RVNCLWCRSDGKSVLAADTHHRIRTYNF---EHLTDSNLLQEDHPVMSFTI--------DATDRLALLNVS 492 (604)
Q Consensus 427 ~~~~~~---~v~~l~~s~~g~~l~~~~~dg~I~i~d~---~~~~~~~~~~~~~~i~~~~~--------s~~~~~l~~~~~ 492 (604)
..+... .+..+.+...- ..+..+.||....... +.+.....+.....-..+.| .++|++..+ .
T Consensus 218 SvID~etmeV~~qV~Vdgnp-d~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V--~ 294 (635)
T PRK02888 218 TAVDAETMEVAWQVMVDGNL-DNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTI--G 294 (635)
T ss_pred EEEECccceEEEEEEeCCCc-ccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEE--C
Confidence 111111 12223333222 2344444554333332 22222222211111133333 346666665 3
Q ss_pred CCeEEEEecCC-----CceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcc------------eEE
Q psy10566 493 TQGVHLWDLRD-----RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRELP------------IAT 554 (604)
Q Consensus 493 dg~I~lwd~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~------------~~~ 554 (604)
++.|.++|.++ .+.+..+..... ..-+..+|||+++++++. +++|.|.|+.+.+. +.+
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKs----PHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvae 370 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKN----PHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAE 370 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCC----ccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEe
Confidence 56799999887 334444432221 122445799998877765 89999999987543 333
Q ss_pred eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 555 LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 555 l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..- .......+|.++ +....|.--|..|-.|++..
T Consensus 371 vev-GlGPLHTaFDg~-G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 371 PEL-GLGPLHTAFDGR-GNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ecc-CCCcceEEECCC-CCEEEeEeecceeEEEehHH
Confidence 332 233456789998 68888999999999999876
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.7e-05 Score=71.59 Aligned_cols=240 Identities=12% Similarity=0.118 Sum_probs=139.3
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-EEEEec---CCC------------CCCeEEEEEecCC--CEEE
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-LRVKLN---HSP------------EDSLTSCSWNRDG--TKFV 408 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-~~~~~~---~~~------------~~~v~~~~~~~~~--~~l~ 408 (604)
..-|+++.|...|.|+++|...| +|.+|.-+... +..++. ++| ...|..+.|..++ ..++
T Consensus 26 ad~ItaVefd~tg~YlatGDkgG--RVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL 103 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGG--RVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL 103 (460)
T ss_pred cceeeEEEeccccceEeecCCCc--eEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence 45689999999999999887666 88888765432 222111 122 2347788887754 4788
Q ss_pred EEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEE--------e-CCCeEEEEEcCCCcccccccCCCCeeEEE
Q psy10566 409 CGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAA--------D-THHRIRTYNFEHLTDSNLLQEDHPVMSFT 479 (604)
Q Consensus 409 s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~--------~-~dg~I~i~d~~~~~~~~~~~~~~~i~~~~ 479 (604)
..+.|.+|++|.+..+.++.........-.-+|-+.-+.+. + .|..|..+ .+....-.|..-+.++.
T Consensus 104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~----p~rvyaNaH~yhiNSiS 179 (460)
T COG5170 104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAK----PCRVYANAHPYHINSIS 179 (460)
T ss_pred EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEec----cceeccccceeEeeeee
Confidence 88999999999985544433322211111112211111100 0 00111111 01111123566789999
Q ss_pred ECCCCCEEEEEecCCeEEEEecCCCce---eeEeeccccc--eEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcc--
Q psy10566 480 IDATDRLALLNVSTQGVHLWDLRDRIL---LRKFQGVTQG--QFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELP-- 551 (604)
Q Consensus 480 ~s~~~~~l~~~~~dg~I~lwd~~~~~~---~~~~~~~~~~--~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~-- 551 (604)
++.|...++++ .|=.|.+|++.-... +..++.|... ...|.+.-++|. .+.+.-.+..|.|++-|++...+
T Consensus 180 ~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcd 258 (460)
T COG5170 180 FNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCD 258 (460)
T ss_pred ecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhcc
Confidence 99888777665 566799998864321 1222222211 123344444443 45666777899999999983211
Q ss_pred ----eEE--e--------eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 552 ----IAT--L--------SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 552 ----~~~--l--------~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
+.. + .+-...|..+.|+++ ++++++-+. -+|+|||++...++
T Consensus 259 n~~klfe~~~D~v~~~ff~eivsSISD~kFs~n-gryIlsRdy-ltvkiwDvnm~k~p 314 (460)
T COG5170 259 NSKKLFELTIDGVDVDFFEEIVSSISDFKFSDN-GRYILSRDY-LTVKIWDVNMAKNP 314 (460)
T ss_pred CchhhhhhccCcccchhHHHHhhhhcceEEcCC-CcEEEEecc-ceEEEEecccccCC
Confidence 111 1 122357889999998 788877654 57999999887654
|
|
| >PF08513 LisH: LisH; InterPro: IPR013720 The LisH motif is found in a large number of eukaryotic proteins, from metazoa, fungi and plants that have a wide range of functions | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.7e-06 Score=48.50 Aligned_cols=27 Identities=33% Similarity=0.487 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHh
Q psy10566 87 EDIVRLIGQYLRTIGLDRTADLLMQES 113 (604)
Q Consensus 87 ~e~~~lI~q~L~e~g~~~s~~~L~~Es 113 (604)
+++.+||++||.++||.+||.+|.+|+
T Consensus 1 ~~Ln~lI~~YL~~~Gy~~tA~~f~~Ea 27 (27)
T PF08513_consen 1 EELNQLIYDYLVENGYKETAKAFAKEA 27 (27)
T ss_dssp HHHHHHHHHHHHHCT-HHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCcHHHHHHHHhcC
Confidence 589999999999999999999999996
|
The recently solved structure of the LisH domain in the N-terminal region of LIS1 depicted it as a novel dimerization motif, and that other structural elements are likely to play an important role in dimerisation [, , ]. The LisH (lis homology) domain mediates protein dimerisation and tetramerisation. The LisH domain is found in Sif2, a component of the Set3 complex which is responsible for repressing meiotic genes. It has been shown that the LisH domain helps mediate interaction with components of the Set3 complex []. ; PDB: 2XTE_L 2XTC_B 2XTD_A 1UUJ_B. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00024 Score=73.02 Aligned_cols=190 Identities=18% Similarity=0.163 Sum_probs=119.5
Q ss_pred EeccCCCCeeEEEECCCCCeEEEEeCCCc--eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCC--eE
Q psy10566 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDC--HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRG--QF 416 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~~~l~s~~~d~~--~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg--~i 416 (604)
.+..-...+..-+|+|++..++....... ..++++++.++....... ..+.-..-+|+|||+.++.+. .|| .|
T Consensus 187 ~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~--~~g~~~~P~fspDG~~l~f~~~rdg~~~i 264 (425)
T COG0823 187 KLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN--FNGNNGAPAFSPDGSKLAFSSSRDGSPDI 264 (425)
T ss_pred EecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec--cCCccCCccCCCCCCEEEEEECCCCCccE
Confidence 33334456777889999998777644322 369999999987655554 223445668999998876554 455 56
Q ss_pred EEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCCC---eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe
Q psy10566 417 YQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHH---RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 417 ~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg---~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 491 (604)
+++|+.++....+... .-..-.|+|||+.++..+..+ .|.++|.+......+......-..-.++|+|++++..+
T Consensus 265 y~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~ 344 (425)
T COG0823 265 YLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFES 344 (425)
T ss_pred EEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEe
Confidence 6678876665554432 122567899999988776543 47777877766544444433333778999999998877
Q ss_pred cC-Ce--EEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 492 ST-QG--VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 492 ~d-g~--I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
.. |. |.+.|+.++...+.+..... ...-.+.+++..++..+.
T Consensus 345 ~~~g~~~i~~~~~~~~~~~~~lt~~~~----~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 345 SSGGQWDIDKNDLASGGKIRILTSTYL----NESPSWAPNGRMIMFSSG 389 (425)
T ss_pred ccCCceeeEEeccCCCCcEEEcccccc----CCCCCcCCCCceEEEecc
Confidence 53 43 66777766554333332211 111233467766655443
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0031 Score=67.04 Aligned_cols=262 Identities=11% Similarity=0.040 Sum_probs=148.1
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC------Cee--EEEECCCCCeEEEEeCCCceEEEEEECCCceEEE
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL------GVA--YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV 385 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~------~V~--~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~ 385 (604)
..+..++.++.|.-.|..++ +.+-....... .+. .++.. ++..++.++.++ .|..+|.++|+.+-
T Consensus 62 g~vy~~~~~g~l~AlD~~tG----~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g--~v~AlD~~TG~~~W 134 (488)
T cd00216 62 GDMYFTTSHSALFALDAATG----KVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDG--RLVALDAETGKQVW 134 (488)
T ss_pred CEEEEeCCCCcEEEEECCCC----hhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCC--eEEEEECCCCCEee
Confidence 34556667888888887732 22222221111 010 11111 225677777777 89999999999887
Q ss_pred EecCCCCC-CeEEEEEec--CCCEEEEEe---------cCCeEEEEEc-CCCeeeeeecee-------------------
Q psy10566 386 KLNHSPED-SLTSCSWNR--DGTKFVCGG---------IRGQFYQCDI-EGQVLDSWEGVR------------------- 433 (604)
Q Consensus 386 ~~~~~~~~-~v~~~~~~~--~~~~l~s~~---------~dg~i~iwd~-~~~~~~~~~~~~------------------- 433 (604)
++...... .-..+.-+| .+..++.++ .+|.+..+|. +|+.+-.+....
T Consensus 135 ~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (488)
T cd00216 135 KFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPG 214 (488)
T ss_pred eecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCC
Confidence 77633211 000111111 224455554 3678888888 466655443210
Q ss_pred ---E-EEEEEcCCCCEEEEEeCCC------------------eEEEEEcCCCcccccccCC-CCe------eEEEE----
Q psy10566 434 ---V-NCLWCRSDGKSVLAADTHH------------------RIRTYNFEHLTDSNLLQED-HPV------MSFTI---- 480 (604)
Q Consensus 434 ---v-~~l~~s~~g~~l~~~~~dg------------------~I~i~d~~~~~~~~~~~~~-~~i------~~~~~---- 480 (604)
+ ...++.+.+..++.++.++ .|.-+|..+++........ ... ....+
T Consensus 215 g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~ 294 (488)
T cd00216 215 GGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK 294 (488)
T ss_pred CCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc
Confidence 0 1234445567788887665 6888899888766554321 100 00011
Q ss_pred CCCCC---EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE------------------eCCC
Q psy10566 481 DATDR---LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG------------------SEDG 539 (604)
Q Consensus 481 s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg------------------s~dg 539 (604)
.-++. .+++++.+|.++.+|.++|+.+-....... . ...++ ..++.+ ..+|
T Consensus 295 ~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~---~---~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G 366 (488)
T cd00216 295 PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQ---P---MAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKG 366 (488)
T ss_pred ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeecc---c---cccCC--ceEEEccccccccCcccccCCCCCCCce
Confidence 12333 578888999999999999998866542110 0 11122 222222 2467
Q ss_pred cEEEEeCCCCcceEEeeCCC--------CCe--eEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 540 KVYIWHVKRELPIATLSGHT--------RTV--SCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 540 ~I~iwd~~~~~~~~~l~~h~--------~~V--~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|.-.|..+|+.+-+..... .+. ..+... +.+++.++.||.|+.+|.++++
T Consensus 367 ~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~---g~~v~~g~~dG~l~ald~~tG~ 427 (488)
T cd00216 367 GLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATA---GNLVFAGAADGYFRAFDATTGK 427 (488)
T ss_pred EEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEec---CCeEEEECCCCeEEEEECCCCc
Confidence 88888988888877665321 111 122222 4678888899999999998887
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=7.9e-05 Score=79.10 Aligned_cols=182 Identities=15% Similarity=0.178 Sum_probs=131.5
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeeceeEEE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVRVNC 436 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~v~~ 436 (604)
++..++.|+... .+..+|+.+.+.......... .|+-+. .+++.+.+|...|+|.+-|.+ -+.++++..|.-.-
T Consensus 146 ~~~~~i~Gg~Q~--~li~~Dl~~~~e~r~~~v~a~-~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~si 220 (1118)
T KOG1275|consen 146 GPSTLIMGGLQE--KLIHIDLNTEKETRTTNVSAS-GVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSI 220 (1118)
T ss_pred CCcceeecchhh--heeeeecccceeeeeeeccCC-ceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccce
Confidence 345677777766 688999998887776653332 244444 467899999999999999994 68889999997777
Q ss_pred EEEcCCCCEEEEEeC---------CCeEEEEEcCCCcccccccCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCC-Cc
Q psy10566 437 LWCRSDGKSVLAADT---------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRD-RI 505 (604)
Q Consensus 437 l~~s~~g~~l~~~~~---------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~-~~ 505 (604)
..|+-.|+.+++++. |..|++||++..+...-++......-+.|.|.- ..+++++..|...+.|..+ ..
T Consensus 221 SDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsN 300 (1118)
T KOG1275|consen 221 SDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSN 300 (1118)
T ss_pred eeeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCC
Confidence 788888999999875 456899999987766555544444556677753 5688888899999998433 12
Q ss_pred e-eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 506 L-LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 506 ~-~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
+ ...+.-+.... .+.....+++++.++.|..+|.|.+|-
T Consensus 301 P~~~~~~v~p~~s-~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 301 PPAGVKMVNPNGS-GISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CccceeEEccCCC-cceeEEecCCCceEEEecccCcEeeec
Confidence 2 22222222222 244455679999999999999999997
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0009 Score=68.19 Aligned_cols=260 Identities=15% Similarity=0.136 Sum_probs=136.4
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCc---------------------------------------eeEeeEEe
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF---------------------------------------TCQHRKTL 343 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~---------------------------------------~~~~~~~l 343 (604)
.|+.+.|+++..-||.|...|.|.||....... ...+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 588999999988899999999999987642110 11222233
Q ss_pred ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec-------CCCCCCeEEEEEec-----CC---CEEE
Q psy10566 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-------HSPEDSLTSCSWNR-----DG---TKFV 408 (604)
Q Consensus 344 ~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~-------~~~~~~v~~~~~~~-----~~---~~l~ 408 (604)
....++|++++.|.-| +++.|..+| .+.+.|++....+.... ......++++.|.. |+ -.++
T Consensus 83 ~~~~g~vtal~~S~iG-Fvaigy~~G--~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~ 159 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIG-FVAIGYESG--SLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL 159 (395)
T ss_dssp ---S-SEEEEEE-BTS-EEEEEETTS--EEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred eccCCcEeEEecCCCc-EEEEEecCC--cEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence 3456889999998554 777777777 89999998887776532 12344688888874 33 4688
Q ss_pred EEecCCeEEEEEcC----CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-------ccCCCCeeE
Q psy10566 409 CGGIRGQFYQCDIE----GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-------LQEDHPVMS 477 (604)
Q Consensus 409 s~~~dg~i~iwd~~----~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-------~~~~~~i~~ 477 (604)
+|+..|.+.+|.+. +.....+.+ .. ...++.. ..|..+|..++....- ......+
T Consensus 160 vGTn~G~v~~fkIlp~~~g~f~v~~~~----~~-~~~~~~i-------~~I~~i~~~~G~~a~At~~~~~~l~~g~~i-- 225 (395)
T PF08596_consen 160 VGTNSGNVLTFKILPSSNGRFSVQFAG----AT-TNHDSPI-------LSIIPINADTGESALATISAMQGLSKGISI-- 225 (395)
T ss_dssp EEETTSEEEEEEEEE-GGG-EEEEEEE----EE---SS-----------EEEEEETTT--B-B-BHHHHHGGGGT-----
T ss_pred EEeCCCCEEEEEEecCCCCceEEEEee----cc-ccCCCce-------EEEEEEECCCCCcccCchhHhhccccCCCc--
Confidence 89999999999772 111111111 00 0111111 1233334443322111 0011111
Q ss_pred EEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC----CCCCcEEEEEeCCCcEEEEeCCCCcceE
Q psy10566 478 FTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG----GANQDFVASGSEDGKVYIWHVKRELPIA 553 (604)
Q Consensus 478 ~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~l~sgs~dg~I~iwd~~~~~~~~ 553 (604)
..+++.+.+..++++...+.+..++.... ...+-.+++. ...+..|++-..+|.|++|.+-.-+.+.
T Consensus 226 -------~g~vVvvSe~~irv~~~~~~k~~~K~~~~--~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~ 296 (395)
T PF08596_consen 226 -------PGYVVVVSESDIRVFKPPKSKGAHKSFDD--PFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIK 296 (395)
T ss_dssp --------EEEEEE-SSEEEEE-TT---EEEEE-SS---EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEE
T ss_pred -------CcEEEEEcccceEEEeCCCCcccceeecc--ccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhh
Confidence 23455556778999999887776655422 1111111221 2356788888999999999999888887
Q ss_pred EeeCCC----CCeeEEEEcCCCCcEEEEEeCC--CcEEEECC
Q psy10566 554 TLSGHT----RTVSCVAWNPVYHQMIASVSDD--CTVRIWGP 589 (604)
Q Consensus 554 ~l~~h~----~~V~~v~~sp~~~~~l~s~s~D--g~I~iW~~ 589 (604)
.+.-+. ..+....++++ +..++-.|.. ..+.+|.-
T Consensus 297 ~~~l~~~~d~~~~~~ssis~~-Gdi~~~~gpsE~~l~sv~~~ 337 (395)
T PF08596_consen 297 SVSLPPPLDSRRLSSSSISRN-GDIFYWTGPSEIQLFSVWGE 337 (395)
T ss_dssp EEE-SS---HHHHTT-EE-TT-S-EEEE-SSSEEEEEEEES-
T ss_pred cccCCCccccccccccEECCC-CCEEEEeCcccEEEEEEEcc
Confidence 776532 23455667777 5565555433 22444544
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0022 Score=66.38 Aligned_cols=224 Identities=12% Similarity=0.078 Sum_probs=109.9
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
+.+....-....+.++|+|++++.++ ||...|+... ...... .+.-...+|.+.++ +++-.... +|.
T Consensus 26 k~lg~~~~~p~~ls~npngr~v~V~g-~geY~iyt~~----~~r~k~-----~G~g~~~vw~~~n~-yAv~~~~~--~I~ 92 (443)
T PF04053_consen 26 KELGSCEIYPQSLSHNPNGRFVLVCG-DGEYEIYTAL----AWRNKA-----FGSGLSFVWSSRNR-YAVLESSS--TIK 92 (443)
T ss_dssp EEEEE-SS--SEEEE-TTSSEEEEEE-TTEEEEEETT----TTEEEE-----EEE-SEEEE-TSSE-EEEE-TTS---EE
T ss_pred ccCCCCCcCCeeEEECCCCCEEEEEc-CCEEEEEEcc----CCcccc-----cCceeEEEEecCcc-EEEEECCC--eEE
Confidence 34444555678899999999998854 7888888743 222221 12345678998655 55555555 688
Q ss_pred EEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 375 VWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
++.--+......+... ..+..+-. |..|...+.+ .|.+||+. ++.+..+.-..|..+.|+++|.+++..+.+
T Consensus 93 I~kn~~~~~~k~i~~~--~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~- 165 (443)
T PF04053_consen 93 IYKNFKNEVVKSIKLP--FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKD- 165 (443)
T ss_dssp EEETTEE-TT-----S--S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S--
T ss_pred EEEcCccccceEEcCC--cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCC-
Confidence 8643333222222211 22444432 7777766555 89999995 788888887789999999999998888755
Q ss_pred eEEEEEcCCC-----------cccccccC-CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 454 RIRTYNFEHL-----------TDSNLLQE-DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 454 ~I~i~d~~~~-----------~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
.+.+++.... ........ ...|.+.+|..+ .++-.+.. .++. +..|+. ..+..-....+.+.
T Consensus 166 ~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~-~~i~~ld~~~yllg 239 (443)
T PF04053_consen 166 SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGET-GIIAHLDKPLYLLG 239 (443)
T ss_dssp SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEE-EEEEE-SS--EEEE
T ss_pred eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCc-ceEEEcCCceEEEE
Confidence 6666665433 01122222 567888888765 34333333 4544 223321 11111122222222
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
. .+..+.++....|+.|..+.+.
T Consensus 240 y---~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 240 Y---LPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp E---ETTTTEEEEE-TT--EEEEE--
T ss_pred E---EccCCEEEEEECCCCEEEEEEC
Confidence 2 2344566666666666666554
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.1e-05 Score=79.01 Aligned_cols=82 Identities=23% Similarity=0.388 Sum_probs=65.5
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
.....|.|++++|+.+.|+.|+.||+|.+||.... ...+....-.++.++|+|+|..+++|+..| .+.+||+
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~------~t~~~ka~~~P~~iaWHp~gai~~V~s~qG--elQ~FD~ 328 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG------VTLLAKAEFIPTLIAWHPDGAIFVVGSEQG--ELQCFDM 328 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCC------eeeeeeecccceEEEEcCCCcEEEEEcCCc--eEEEEEe
Confidence 46789999999999999999999999999998722 122223445688999999999999999888 8999998
Q ss_pred CCceEEEEec
Q psy10566 379 ETELLRVKLN 388 (604)
Q Consensus 379 ~~~~~~~~~~ 388 (604)
.-......+.
T Consensus 329 ALspi~~qLl 338 (545)
T PF11768_consen 329 ALSPIKMQLL 338 (545)
T ss_pred ecCccceeec
Confidence 7655444433
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=6.9e-05 Score=79.54 Aligned_cols=181 Identities=14% Similarity=0.189 Sum_probs=124.4
Q ss_pred CCCEEEEEecCCeEEEEEcCCCeeeeeeceeE-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEE
Q psy10566 403 DGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRV-NCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTI 480 (604)
Q Consensus 403 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v-~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~ 480 (604)
++..++.|+....+..+|+.+........... .+.....+++.+.+|+..|+|.+-|.++.+....+. |.+.+..+.+
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv 225 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV 225 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence 55678888888888888986544433332211 233344578899999999999999999987666554 6677765554
Q ss_pred CCCCCEEEEEec---------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-Cc
Q psy10566 481 DATDRLALLNVS---------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-EL 550 (604)
Q Consensus 481 s~~~~~l~~~~~---------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~ 550 (604)
.|+.|++++. |..|+|||++..+.+..+.-+.... .++ +.+.-...++..+..|...+-|..+ +.
T Consensus 226 --~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~-flr--f~Psl~t~~~V~S~sGq~q~vd~~~lsN 300 (1118)
T KOG1275|consen 226 --QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQ-FLR--FHPSLTTRLAVTSQSGQFQFVDTATLSN 300 (1118)
T ss_pred --cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCch-hhh--hcccccceEEEEecccceeeccccccCC
Confidence 6788888765 4458999999887766655444431 122 1122345678888899999988432 22
Q ss_pred c---eEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 551 P---IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 551 ~---~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+ +..+......+.++.++++ +..+|.+..+|.|.+|.-
T Consensus 301 P~~~~~~v~p~~s~i~~fDiSsn-~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 301 PPAGVKMVNPNGSGISAFDISSN-GDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred CccceeEEccCCCcceeEEecCC-CceEEEecccCcEeeecC
Confidence 2 2222223455999999999 899999999999999983
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0096 Score=62.15 Aligned_cols=242 Identities=17% Similarity=0.211 Sum_probs=126.9
Q ss_pred cEEEEEEcCCCCeEEEE-ECCC----eEEEEEeCCCCceeEeeE-EeccCCCCeeEEEECCCCCeEEEEeCCC-------
Q psy10566 303 EVWFCKFSPDGLKLATG-SKDT----TVIIWDVDPVTFTCQHRK-TLEGHTLGVAYLAWSPDSSHLLVVGPED------- 369 (604)
Q Consensus 303 ~V~~v~fspdg~~lasg-s~dg----~i~iwd~~~~~~~~~~~~-~l~~h~~~V~~l~~spd~~~l~s~~~d~------- 369 (604)
.+...++||||+++|.+ +..| .++++|+.+ + +.+. .+... ....+.|.++++.|+....+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~t--g--~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~ 198 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLET--G--KFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDS 198 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTT--T--EEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CC
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCC--C--cCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccC
Confidence 44468899999988865 4444 499999983 2 2222 22211 122399999999888776554
Q ss_pred --ceEEEEEECCCceE--EEEecCCCCCC-eEEEEEecCCCEEEEEecCC----eEEEEEcCCC-----eeeeeec-e-e
Q psy10566 370 --CHELWVWNIETELL--RVKLNHSPEDS-LTSCSWNRDGTKFVCGGIRG----QFYQCDIEGQ-----VLDSWEG-V-R 433 (604)
Q Consensus 370 --~~~i~vwd~~~~~~--~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~-----~~~~~~~-~-~ 433 (604)
...|+.|.+.+... ...+....... ...+..++|+++++.....+ .+.+.++... ....+.. . .
T Consensus 199 ~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~ 278 (414)
T PF02897_consen 199 GYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDG 278 (414)
T ss_dssp GCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS
T ss_pred CCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCc
Confidence 34699999987642 23333223333 67888999999988654433 4677777542 2222221 1 2
Q ss_pred EEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCcc---c-ccccCCCCeeEEEECCCCCEEEEEec-CC--eEEEEecCC
Q psy10566 434 VNCLWCRSDGKSVLAADT---HHRIRTYNFEHLTD---S-NLLQEDHPVMSFTIDATDRLALLNVS-TQ--GVHLWDLRD 503 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~---dg~I~i~d~~~~~~---~-~~~~~~~~i~~~~~s~~~~~l~~~~~-dg--~I~lwd~~~ 503 (604)
+....-...+.+++.... .+.|...++..... . .++.+...+.-..+...+.+|++... ++ .|+++++..
T Consensus 279 ~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~ 358 (414)
T PF02897_consen 279 VEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDD 358 (414)
T ss_dssp -EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-
T ss_pred eEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCC
Confidence 222222223333333322 35677778777653 1 33444443333333334555555444 43 488999884
Q ss_pred CceeeEeeccccceEEEEeeeCCCCCc-EEEEEeC---CCcEEEEeCCCCcce
Q psy10566 504 RILLRKFQGVTQGQFTIHSCFGGANQD-FVASGSE---DGKVYIWHVKRELPI 552 (604)
Q Consensus 504 ~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~---dg~I~iwd~~~~~~~ 552 (604)
+............. +......++++ +.++.+. -++++-||+.+++..
T Consensus 359 ~~~~~~~~~p~~g~--v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 359 GKESREIPLPEAGS--VSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp TEEEEEEESSSSSE--EEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred CcEEeeecCCcceE--EeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 44444444333321 22222223333 3333322 367888999887653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >smart00667 LisH Lissencephaly type-1-like homology motif | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.3e-05 Score=50.19 Aligned_cols=32 Identities=38% Similarity=0.551 Sum_probs=29.6
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHHHHhCCc
Q psy10566 85 TDEDIVRLIGQYLRTIGLDRTADLLMQESGCK 116 (604)
Q Consensus 85 ~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~ 116 (604)
.++++.++|+|||...||.+|+++|++|+++.
T Consensus 2 ~~~~l~~lI~~yL~~~g~~~ta~~l~~e~~~~ 33 (34)
T smart00667 2 SRSELNRLILEYLLRNGYEETAETLQKESGLS 33 (34)
T ss_pred cHHHHHHHHHHHHHHcCHHHHHHHHHHHhCCC
Confidence 46789999999999999999999999999874
|
Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.017 Score=59.20 Aligned_cols=259 Identities=12% Similarity=0.077 Sum_probs=165.6
Q ss_pred cEEEEEEcCCCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 303 EVWFCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
....+...++|..+.... ....+.+-+.. ..........-...-..++.++.+..+.....+. ..|.+.|..+.
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~----~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~-~~v~vid~~~~ 106 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDAT----SNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDS-NTVSVIDTATN 106 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccc----cceeeeeccCCCccccceeeCCCCCeEEEecCCC-CeEEEEcCccc
Confidence 455677888885433332 22244444432 1111111111113345788899888666655443 27999998888
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEec---CCeEEEEEcC-CCeeeeee-ceeEEEEEEcCCCCEEEEEe-CCCeE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI---RGQFYQCDIE-GQVLDSWE-GVRVNCLWCRSDGKSVLAAD-THHRI 455 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~-~~~~~~~~-~~~v~~l~~s~~g~~l~~~~-~dg~I 455 (604)
........+. ....++++++++.+.++.. ++.+.+.|.. ++.+.... +..-..++++|+|+.++... .++.|
T Consensus 107 ~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v 184 (381)
T COG3391 107 TVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTV 184 (381)
T ss_pred ceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCeE
Confidence 7777766443 5778999999988877766 5788888875 44444322 22238899999999766665 78899
Q ss_pred EEEEcCCCcccc-----cccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 456 RTYNFEHLTDSN-----LLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 456 ~i~d~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
.++|........ ..........+.+++++.++.+.... +.+...|..++.....-...... ........|
T Consensus 185 ~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~--~~~~v~~~p 262 (381)
T COG3391 185 SVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG--APRGVAVDP 262 (381)
T ss_pred EEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC--CCCceeECC
Confidence 999977665442 12334556788999999987776665 48999999888766542211111 111133458
Q ss_pred CCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCC---CCeeEEEEcCC
Q psy10566 528 NQDFVASGSE-DGKVYIWHVKRELPIATLSGHT---RTVSCVAWNPV 570 (604)
Q Consensus 528 ~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~---~~V~~v~~sp~ 570 (604)
+|.++.+... .+.+.+.|..+........... ..+..+++.+.
T Consensus 263 ~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
T COG3391 263 AGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPL 309 (381)
T ss_pred CCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceee
Confidence 9998888855 4899999999887777655432 23555665554
|
|
| >PF10607 CLTH: CTLH/CRA C-terminal to LisH motif domain; InterPro: IPR019589 This entry represents the CRA (or CT11-RanBPM) domain, which is a protein-protein interaction domain present in crown eukaryotes (plants, animals, fungi) and which is found in Ran-binding proteins such as Ran-binding protein 9 (RanBP9 or RanBPM) and RanBP10 | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.1e-05 Score=67.64 Aligned_cols=130 Identities=24% Similarity=0.346 Sum_probs=92.3
Q ss_pred HHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcCCCCC-Chhhhhhhh
Q psy10566 122 AAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNH-NTAKVHELS 200 (604)
Q Consensus 122 ~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~~-~~~~~~~L~ 200 (604)
...++++|++|+++.|...+....+.+... -..+.|.++.|+|+|++..++..+|+.+.|+.++|... ..+.++.+.
T Consensus 5 r~~I~~~I~~g~i~~Ai~w~~~~~~~l~~~--~~~L~f~L~~q~fiell~~~~~~~Ai~y~r~~l~~~~~~~~~~l~~~~ 82 (145)
T PF10607_consen 5 RKKIRQAILNGDIDPAIEWLNENFPELLKR--NSSLEFELRCQQFIELLREGDIMEAIEYARKHLSPFNDEFLEELKKLM 82 (145)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHcCHHHHhc--CCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 577899999999999999999876654322 25678999999999999999999999999998876654 667788888
Q ss_pred hhccccchHH--HhhhhccCCCChhhHHHHHHHhhhcCCCCccCC-hhHHHHHHHHHH
Q psy10566 201 SFMMCSGVEQ--LLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLP-PRRLQTLLSQAV 255 (604)
Q Consensus 201 ~ll~~~~~~~--~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p-~~rl~~ll~q~~ 255 (604)
.+|...++.+ .......- ..+.|.++.+.+...+......| .+.|..++++..
T Consensus 83 ~lL~~~~~~~~~~s~~~~l~--~~~~~~~la~~~~~~~l~~~~~~~~s~L~~~~~~g~ 138 (145)
T PF10607_consen 83 SLLAYPDPEEPLPSPYKELL--SPERREELAEEFNSAILKSYGLPKESPLEVILKAGL 138 (145)
T ss_pred HHHHcCCcccccchHHHHHh--ChHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHH
Confidence 8887766554 11111111 22567777776666555444455 345666665544
|
RanBPM is a scaffolding protein important in regulating cellular function in both the immune system and the nervous system, and may act as an adapter protein to couple membrane receptors to intracellular signaling pathways. This domain is at the C terminus of the proteins and is the binding domain for the CRA motif, which is comprised of approximately 100 amino acids at the C-terminal of RanBPM. It was found to be important for the interaction of RanBPM with fragile X mental retardation protein (FMRP), but its functional significance has yet to be determined []. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0019 Score=66.81 Aligned_cols=223 Identities=12% Similarity=0.115 Sum_probs=109.8
Q ss_pred EeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEE-E
Q psy10566 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC-D 420 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw-d 420 (604)
.+......+..+.++|+|+.+++++.. ...++.......... +.....+|.+ .+.+++-...+.|.++ +
T Consensus 27 ~lg~~~~~p~~ls~npngr~v~V~g~g---eY~iyt~~~~r~k~~------G~g~~~vw~~-~n~yAv~~~~~~I~I~kn 96 (443)
T PF04053_consen 27 ELGSCEIYPQSLSHNPNGRFVLVCGDG---EYEIYTALAWRNKAF------GSGLSFVWSS-RNRYAVLESSSTIKIYKN 96 (443)
T ss_dssp EEEE-SS--SEEEE-TTSSEEEEEETT---EEEEEETTTTEEEEE------EE-SEEEE-T-SSEEEEE-TTS-EEEEET
T ss_pred cCCCCCcCCeeEEECCCCCEEEEEcCC---EEEEEEccCCccccc------CceeEEEEec-CccEEEEECCCeEEEEEc
Confidence 333345568899999999999886544 467777444333222 2345788988 4457777778889996 4
Q ss_pred cCCCeeeeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 421 IEGQVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 421 ~~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
++....+.+... .+..+.. |..+...+.+ .|.+||+.+.+....+.... |..+.|++++.+++..+.+ .+.++
T Consensus 97 ~~~~~~k~i~~~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i~il 170 (443)
T PF04053_consen 97 FKNEVVKSIKLPFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SIYIL 170 (443)
T ss_dssp TEE-TT-----SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEE
T ss_pred CccccceEEcCCcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eEEEE
Confidence 443332233222 3444444 7766666554 89999999988777776543 8999999999999998766 47776
Q ss_pred ecCCCc-----------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc
Q psy10566 500 DLRDRI-----------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 500 d~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s 568 (604)
+..... ....+..... .|.+..|..+ -++++. .. .|+.+ -.|. ..++..-..++.=+.+.
T Consensus 171 ~~~~~~~~~~~~~g~e~~f~~~~E~~~---~IkSg~W~~d-~fiYtT-~~-~lkYl--~~Ge-~~~i~~ld~~~yllgy~ 241 (443)
T PF04053_consen 171 KYNLEAVAAIPEEGVEDAFELIHEISE---RIKSGCWVED-CFIYTT-SN-HLKYL--VNGE-TGIIAHLDKPLYLLGYL 241 (443)
T ss_dssp EE-HHHHHHBTTTB-GGGEEEEEEE-S-----SEEEEETT-EEEEE--TT-EEEEE--ETTE-EEEEEE-SS--EEEEEE
T ss_pred EecchhcccccccCchhceEEEEEecc---eeEEEEEEcC-EEEEEc-CC-eEEEE--EcCC-cceEEEcCCceEEEEEE
Confidence 643320 1111111011 1222222122 222222 22 44432 2222 22222224566677778
Q ss_pred CCCCcEEEEEeCCCcEEEECCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|. .+.+.....|+.|..+.++
T Consensus 242 ~~-~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 242 PK-ENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp TT-TTEEEEE-TT--EEEEE--
T ss_pred cc-CCEEEEEECCCCEEEEEEC
Confidence 76 5677788888888877664
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0046 Score=63.42 Aligned_cols=204 Identities=16% Similarity=0.120 Sum_probs=144.5
Q ss_pred EEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-CceEEEEEECCCc
Q psy10566 304 VWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-DCHELWVWNIETE 381 (604)
Q Consensus 304 V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-~~~~i~vwd~~~~ 381 (604)
-..++.++++. ..++...++.|.+.|.. .........- ......++++|+++.+.++... +..++.+.|..++
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~----~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTA----TNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCc----ccceeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence 44678888888 44444556889999965 2222222221 1256789999999888887763 2348999999999
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCeeee------e-eceeEEEEEEcCCCCEEEEEeCC-
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIEGQVLDS------W-EGVRVNCLWCRSDGKSVLAADTH- 452 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~------~-~~~~v~~l~~s~~g~~l~~~~~d- 452 (604)
........+. .+ ..+++.|+|..++.+. .++.+.+.|.++..+.. . .+.....+.++++|+.+.+....
T Consensus 151 ~~~~~~~vG~-~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~ 228 (381)
T COG3391 151 KVTATIPVGN-TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGS 228 (381)
T ss_pred eEEEEEecCC-Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccC
Confidence 9888855332 33 8999999999776665 77899999987665553 1 11245678999999977776655
Q ss_pred --CeEEEEEcCCCccccc-ccCCC-CeeEEEECCCCCEEEEEecC-CeEEEEecCCCceeeEeeccc
Q psy10566 453 --HRIRTYNFEHLTDSNL-LQEDH-PVMSFTIDATDRLALLNVST-QGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 453 --g~I~i~d~~~~~~~~~-~~~~~-~i~~~~~s~~~~~l~~~~~d-g~I~lwd~~~~~~~~~~~~~~ 514 (604)
+.+...|..+...... ..... ....+.++|+|+.+.+.... +.+.+.|..+......+....
T Consensus 229 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~ 295 (381)
T COG3391 229 GSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGN 295 (381)
T ss_pred CCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccc
Confidence 4899999888655443 11112 56778999999999888554 889999998887776655443
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.5e-06 Score=84.95 Aligned_cols=199 Identities=15% Similarity=0.159 Sum_probs=130.7
Q ss_pred CcEEEEEEcCCC--CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---ceEEEEE
Q psy10566 302 DEVWFCKFSPDG--LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---CHELWVW 376 (604)
Q Consensus 302 ~~V~~v~fspdg--~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---~~~i~vw 376 (604)
..+.|++++-+. ..++.|..+|.|.+-.+...... ......+|..+.++++|++-+...+++|.+. ...+.+|
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS--s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS--SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccc--cceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 456777766543 47899999999999887632222 2345567888999999999655555555542 2268999
Q ss_pred ECCCce--E--EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee--eeeeceeEEEEEEcC-CCCEEEEE
Q psy10566 377 NIETEL--L--RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL--DSWEGVRVNCLWCRS-DGKSVLAA 449 (604)
Q Consensus 377 d~~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~v~~l~~s~-~g~~l~~~ 449 (604)
|+.++- + ...+..+......+++|..+.+.+.+|.....+.++|++.... ..+....+..+.+.| .++++++.
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceecc
Confidence 998872 1 1122212334566899999999999999999999999964332 223333567788888 66666555
Q ss_pred eCCCeEEEEEc-CCCc-ccccccC-----CCCeeEEEECCCCCE-EEEEe-cCCeEEEEecCC
Q psy10566 450 DTHHRIRTYNF-EHLT-DSNLLQE-----DHPVMSFTIDATDRL-ALLNV-STQGVHLWDLRD 503 (604)
Q Consensus 450 ~~dg~I~i~d~-~~~~-~~~~~~~-----~~~i~~~~~s~~~~~-l~~~~-~dg~I~lwd~~~ 503 (604)
. ||.|.+||. ...+ ....+.+ ...+..++|+|...- +++.. ..++|++||+..
T Consensus 215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 4 999999994 3222 1222222 234889999996532 33333 457899999863
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0094 Score=56.45 Aligned_cols=213 Identities=12% Similarity=0.130 Sum_probs=106.1
Q ss_pred eEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 340 ~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
.+.+.+-...+..++|.|+++.|++..... +.|..++. +|+.+.++.....+..-.+++..++.++++.-.++.+.++
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~-~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~ 91 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEP-GEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIF 91 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTT-TEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCC-CEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEE
Confidence 345666667799999999988777777665 47888886 4777777765445668889998777776666568888888
Q ss_pred EcC--CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEE
Q psy10566 420 DIE--GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVH 497 (604)
Q Consensus 420 d~~--~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~ 497 (604)
+++ +..+..-. +..+. +. ........+-.++|++.++.++++....-..
T Consensus 92 ~~~~~~~~~~~~~---~~~~~---------------------l~-----~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~ 142 (248)
T PF06977_consen 92 TIDDDTTSLDRAD---VQKIS---------------------LG-----FPNKGNKGFEGLAYDPKTNRLFVAKERKPKR 142 (248)
T ss_dssp EE----TT--EEE---EEEEE-----------------------------S---SS--EEEEEETTTTEEEEEEESSSEE
T ss_pred EEeccccccchhh---ceEEe---------------------cc-----cccCCCcceEEEEEcCCCCEEEEEeCCCChh
Confidence 772 21111100 00000 00 0001123355566666655555555544444
Q ss_pred EEecCC---CceeeE--eeccc---cceEEEEee-eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC---------
Q psy10566 498 LWDLRD---RILLRK--FQGVT---QGQFTIHSC-FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT--------- 559 (604)
Q Consensus 498 lwd~~~---~~~~~~--~~~~~---~~~~~i~~~-~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~--------- 559 (604)
+|.+.. ...+.. ..... .....+..+ +.+..+++++.......|.++| .+|+++..+.-..
T Consensus 143 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~ 221 (248)
T PF06977_consen 143 LYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDI 221 (248)
T ss_dssp EEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS--
T ss_pred hEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCccccc
Confidence 444432 111110 00000 011112222 3345677888888889999999 6677766554222
Q ss_pred CCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 560 RTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 560 ~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
...-.|+|.++ +.+.++ ++-+..++
T Consensus 222 ~QpEGIa~d~~-G~LYIv-sEpNlfy~ 246 (248)
T PF06977_consen 222 PQPEGIAFDPD-GNLYIV-SEPNLFYR 246 (248)
T ss_dssp -SEEEEEE-TT---EEEE-ETTTEEEE
T ss_pred CCccEEEECCC-CCEEEE-cCCceEEE
Confidence 24678999998 555544 45444443
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0012 Score=68.74 Aligned_cols=153 Identities=13% Similarity=0.159 Sum_probs=106.6
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-- 423 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-- 423 (604)
|...|.--++...+++++.|+..| .+++|+-..+.....-..+..+.+..+..+++..++|.|+..|.|.++-+..
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G--~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAG--SVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL 109 (726)
T ss_pred CcceEEEEEeecCCceEEEecccc--eEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccC
Confidence 445566667788899999999988 8999998887765544434455677778888999999999999999997732
Q ss_pred ----Ceeeee---eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-----cccccccCCCCeeEEEECCCCCEEEEEe
Q psy10566 424 ----QVLDSW---EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL-----TDSNLLQEDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 424 ----~~~~~~---~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 491 (604)
..+... +..+|++++|++++..+++|+..|+|..-.+... ....++...+.|..+.+. ..++++++
T Consensus 110 p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~--q~~LLVSt 187 (726)
T KOG3621|consen 110 PRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL--QSYLLVST 187 (726)
T ss_pred CCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc--cceehHhh
Confidence 111122 2347999999999999999999999999888772 222334446667666654 33444433
Q ss_pred cCCeEEEEecCC
Q psy10566 492 STQGVHLWDLRD 503 (604)
Q Consensus 492 ~dg~I~lwd~~~ 503 (604)
.-. -.+++.+.
T Consensus 188 l~r-~~Lc~tE~ 198 (726)
T KOG3621|consen 188 LTR-CILCQTEA 198 (726)
T ss_pred hhh-hheeecch
Confidence 322 23444443
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.024 Score=55.42 Aligned_cols=226 Identities=12% Similarity=0.199 Sum_probs=127.0
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEe---
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKL--- 387 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~--- 387 (604)
..++.|+.|+.+| +.+++... ........ +...|..+...|+-+.+++-+. + .++++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~---~~~~~~i~--~~~~I~ql~vl~~~~~llvLsd-~--~l~~~~L~~l~~~~~~~~~ 75 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSD---PSKPTRIL--KLSSITQLSVLPELNLLLVLSD-G--QLYVYDLDSLEPVSTSAPL 75 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecC---CccceeEe--ecceEEEEEEecccCEEEEEcC-C--ccEEEEchhhccccccccc
Confidence 3577899999998 88898831 11112222 2234999999998888777764 5 7999998764433311
Q ss_pred ----------cCCCCCCeEEEE--EecCCCEEEEEecCCeEEEEEcCC------Ceeeeeec-eeEEEEEEcCCCCEEEE
Q psy10566 388 ----------NHSPEDSLTSCS--WNRDGTKFVCGGIRGQFYQCDIEG------QVLDSWEG-VRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 388 ----------~~~~~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~-~~v~~l~~s~~g~~l~~ 448 (604)
.......+...+ -...+...++......|.+|.... +..+.+.- ..+..++|. ++.++.
T Consensus 76 ~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v 153 (275)
T PF00780_consen 76 AFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICV 153 (275)
T ss_pred cccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEE
Confidence 111223344444 123444555555566888887743 23344332 257777777 566666
Q ss_pred EeCCCeEEEEEcCCCcccccccC-------------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee--Eeecc
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQE-------------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR--KFQGV 513 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~--~~~~~ 513 (604)
+..+ ...+.|+.+.....+... ..++..+.++ ++.++++- +..-...|. .|++.+ .+.-.
T Consensus 154 ~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~W~ 228 (275)
T PF00780_consen 154 GTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNK-NGEPSRKSTIQWS 228 (275)
T ss_pred EeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcC-CCCcCcccEEEcC
Confidence 6644 578888887655444321 1233344443 34555542 333333343 444433 12111
Q ss_pred ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT 559 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~ 559 (604)
.....+ .+. ..|++..+. +.|.||++.++++++++....
T Consensus 229 -~~p~~~--~~~---~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 229 -SAPQSV--AYS---SPYLIAFSS-NSIEVRSLETGELVQTIPLPN 267 (275)
T ss_pred -CchhEE--EEE---CCEEEEECC-CEEEEEECcCCcEEEEEECCC
Confidence 111122 222 237777665 459999999999998887543
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0042 Score=62.29 Aligned_cols=212 Identities=15% Similarity=0.144 Sum_probs=121.2
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec---C----CCEEEEEec---------C-CeEEEEEcCCC-----eeeee
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR---D----GTKFVCGGI---------R-GQFYQCDIEGQ-----VLDSW 429 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~----~~~l~s~~~---------d-g~i~iwd~~~~-----~~~~~ 429 (604)
.|++.|..+.+.+..+.......+.+++... + ..++++|+. . |.|.++++... .++..
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 5888888888777666554555566655433 2 467777754 2 89999999652 33332
Q ss_pred ec----eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-ccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC-
Q psy10566 430 EG----VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT-DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD- 503 (604)
Q Consensus 430 ~~----~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~- 503 (604)
.. ..|.+++.. +..++++ .++.|.+|++.... ....-....++...++...++++++|.....+.++..+.
T Consensus 83 ~~~~~~g~V~ai~~~--~~~lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~ 159 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF--NGRLVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEE 159 (321)
T ss_dssp EEEEESS-EEEEEEE--TTEEEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETT
T ss_pred EEEeecCcceEhhhh--CCEEEEe-ecCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEcc
Confidence 22 257776655 3334433 45899999998876 333322333333444444466999999888888875543
Q ss_pred CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-------Cc--ceEEeeCC-CCCeeEE---EEcC-
Q psy10566 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-------EL--PIATLSGH-TRTVSCV---AWNP- 569 (604)
Q Consensus 504 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-------~~--~~~~l~~h-~~~V~~v---~~sp- 569 (604)
...+..+...........+.+. .+++.++.+..+|.+.++.... +. ......-| ...|+++ ++.|
T Consensus 160 ~~~l~~va~d~~~~~v~~~~~l-~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~ 238 (321)
T PF03178_consen 160 NNKLILVARDYQPRWVTAAEFL-VDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPR 238 (321)
T ss_dssp TE-EEEEEEESS-BEEEEEEEE--SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--
T ss_pred CCEEEEEEecCCCccEEEEEEe-cCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeec
Confidence 2223333333333333333333 3446899999999999998762 22 22222223 4567777 5555
Q ss_pred -CCC-----cEEEEEeCCCcEEEE
Q psy10566 570 -VYH-----QMIASVSDDCTVRIW 587 (604)
Q Consensus 570 -~~~-----~~l~s~s~Dg~I~iW 587 (604)
.+. ..++.++.+|.|.+.
T Consensus 239 ~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 239 SGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred CCCCcccccceEEEEecCCEEEEE
Confidence 212 247788889988743
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.014 Score=62.14 Aligned_cols=232 Identities=14% Similarity=0.103 Sum_probs=132.1
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC-----Cee-EEEECCCCCeEEEEeCC-------CceEEEEEECCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL-----GVA-YLAWSPDSSHLLVVGPE-------DCHELWVWNIET 380 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~-----~V~-~l~~spd~~~l~s~~~d-------~~~~i~vwd~~~ 380 (604)
..++.++.++.|.-+|.+ +++.+-....... .+. +..+. +..++.++.+ ..+.+..+|..+
T Consensus 111 ~~V~v~~~~g~v~AlD~~----TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~T 184 (488)
T cd00216 111 RKVFFGTFDGRLVALDAE----TGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVET 184 (488)
T ss_pred CeEEEecCCCeEEEEECC----CCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCC
Confidence 567778889999999988 3333333222111 011 11121 2344444321 123799999999
Q ss_pred ceEEEEecCCCCC-------------------Ce-EEEEEecCCCEEEEEecCC------------------eEEEEEc-
Q psy10566 381 ELLRVKLNHSPED-------------------SL-TSCSWNRDGTKFVCGGIRG------------------QFYQCDI- 421 (604)
Q Consensus 381 ~~~~~~~~~~~~~-------------------~v-~~~~~~~~~~~l~s~~~dg------------------~i~iwd~- 421 (604)
|+.+-.+...... .+ ...++.+.+..++.++.++ .+.-+|.
T Consensus 185 G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~ 264 (488)
T cd00216 185 GKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDAD 264 (488)
T ss_pred CceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCC
Confidence 9987766532111 01 1234445567788887665 6777887
Q ss_pred CCCeeeeeec--eeEE--------EEE-E-cCCCC---EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCE
Q psy10566 422 EGQVLDSWEG--VRVN--------CLW-C-RSDGK---SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRL 486 (604)
Q Consensus 422 ~~~~~~~~~~--~~v~--------~l~-~-s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~ 486 (604)
+|+..-.+.. +... .+. . .-++. .+++++.+|.+..+|..+++........ ...++.+| ..
T Consensus 265 tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~--~~~~~~~~--~~ 340 (488)
T cd00216 265 TGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV--EQPMAYDP--GL 340 (488)
T ss_pred CCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee--ccccccCC--ce
Confidence 4666544431 1100 000 0 12333 5778888999999999998765543321 11223333 33
Q ss_pred EEEE------------------ecCCeEEEEecCCCceeeEeeccccc-------eEEEEeeeCCCCCcEEEEEeCCCcE
Q psy10566 487 ALLN------------------VSTQGVHLWDLRDRILLRKFQGVTQG-------QFTIHSCFGGANQDFVASGSEDGKV 541 (604)
Q Consensus 487 l~~~------------------~~dg~I~lwd~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~sgs~dg~I 541 (604)
++++ ..+|.+.-+|..+++.+-+....... ........ ..+..|+.|+.||.|
T Consensus 341 vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l 418 (488)
T cd00216 341 VYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYF 418 (488)
T ss_pred EEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeE
Confidence 3332 23577888999998877655432100 00000011 245788999999999
Q ss_pred EEEeCCCCcceEEeeC
Q psy10566 542 YIWHVKRELPIATLSG 557 (604)
Q Consensus 542 ~iwd~~~~~~~~~l~~ 557 (604)
+.+|.++|+.+.+.+-
T Consensus 419 ~ald~~tG~~lW~~~~ 434 (488)
T cd00216 419 RAFDATTGKELWKFRT 434 (488)
T ss_pred EEEECCCCceeeEEEC
Confidence 9999999999988764
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG0396|consensus | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00011 Score=70.34 Aligned_cols=120 Identities=14% Similarity=0.197 Sum_probs=94.0
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHHHHhCCc--cCC---hhHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHH
Q psy10566 85 TDEDIVRLIGQYLRTIGLDRTADLLMQESGCK--LDH---PSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKF 159 (604)
Q Consensus 85 ~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~--~~~---~~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~ 159 (604)
.+.-+-|+|..|+.-+||.+||..|-++|.+. .+. .++..+++++++|+...|+.-.++-+..+. ..-..+-|
T Consensus 114 ~r~~l~r~vvdhmlr~gy~~~A~~L~K~s~ledlvD~Dv~~~~~~I~~sll~~~l~~~Lswc~ehk~~Lk--K~~S~lEf 191 (389)
T KOG0396|consen 114 PRNKLDRFVVDHMLRNGYFGAAVLLGKKSQLEDLVDSDVYKRAYGIRDSLLAGELEPALSWCKEHKVELK--KEESSLEF 191 (389)
T ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH--hccchhhh
Confidence 47788999999999999999999999999865 122 246778999999998888886654433222 11224457
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHhhcCCCC-CChhhhhhhhhhcccc
Q psy10566 160 LILEQKYLEYLEDGRVLDALHVLRNELTPLN-HNTAKVHELSSFMMCS 206 (604)
Q Consensus 160 ~~~~~~~le~le~~~~~~Al~~l~~~l~p~~-~~~~~~~~L~~ll~~~ 206 (604)
.+..|+|.||++.+++.+|+.+.++.+.|.. .....++....+|.++
T Consensus 192 ~lRlQefIELi~~~~~~~Ai~~akk~f~~~~~~~~~~Lk~a~g~laF~ 239 (389)
T KOG0396|consen 192 QLRLQEFIELIKVDNYDKAIAFAKKHFAPWAKSHKSDLKLAMGLLAFP 239 (389)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhcCc
Confidence 8999999999999999999999999999974 5566777777777653
|
|
| >smart00668 CTLH C-terminal to LisH motif | Back alignment and domain information |
|---|
Probab=97.80 E-value=4.2e-05 Score=54.78 Aligned_cols=53 Identities=28% Similarity=0.508 Sum_probs=43.8
Q ss_pred hHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHHHHHHHHHhcCCh
Q psy10566 121 SAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKYLEYLEDGRV 175 (604)
Q Consensus 121 ~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~le~le~~~~ 175 (604)
.+..++++|+.|+|+.|+..+....+.+.. .-..+.|.+++|+|+|+++.++.
T Consensus 4 ~~~~i~~~i~~g~~~~a~~~~~~~~~~l~~--~~~~l~f~L~~q~~lell~~~~~ 56 (58)
T smart00668 4 ERKRIRELILKGDWDEALEWLSSLKPPLLE--RNSKLEFELRKQKFLELVRQGKL 56 (58)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHcCHHHhc--cCCCchhHHHHHHHHHHHHcCCc
Confidence 467899999999999999999988764432 23478999999999999997654
|
Alpha-helical motif of unknown function. |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.031 Score=59.76 Aligned_cols=145 Identities=12% Similarity=0.045 Sum_probs=85.8
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec---CCCEEEEEe------cCCeEEEEEc-CCCeeeee
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR---DGTKFVCGG------IRGQFYQCDI-EGQVLDSW 429 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~------~dg~i~iwd~-~~~~~~~~ 429 (604)
..++.++.++ .+...|..+|+.+-.........-..+.-+| ++ .++++. .+|.|..+|. +|+.+-.+
T Consensus 121 ~~v~v~t~dg--~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~ 197 (527)
T TIGR03075 121 GKVFFGTLDA--RLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRR 197 (527)
T ss_pred CEEEEEcCCC--EEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEec
Confidence 4567777777 8999999999988766532111001111112 34 444443 2678888888 45554333
Q ss_pred ecee---------------------------------E-EEEEEcCCCCEEEEEeCC-----C-----------eEEEEE
Q psy10566 430 EGVR---------------------------------V-NCLWCRSDGKSVLAADTH-----H-----------RIRTYN 459 (604)
Q Consensus 430 ~~~~---------------------------------v-~~l~~s~~g~~l~~~~~d-----g-----------~I~i~d 459 (604)
.... + ..+++.+....++.+..+ + .|.-.|
T Consensus 198 ~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld 277 (527)
T TIGR03075 198 YTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARD 277 (527)
T ss_pred cCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEc
Confidence 2210 0 123556666666665522 1 566777
Q ss_pred cCCCcccccccC----------CCCeeEEEECCCCC---EEEEEecCCeEEEEecCCCcee
Q psy10566 460 FEHLTDSNLLQE----------DHPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 460 ~~~~~~~~~~~~----------~~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
+++++....++. .....-+.+..+|+ .++.+..+|.+++.|-++++++
T Consensus 278 ~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 278 PDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred cccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 777776554442 11222333445676 7889999999999999999876
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.011 Score=64.65 Aligned_cols=139 Identities=14% Similarity=0.233 Sum_probs=94.6
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-----CCCEEEEEecCCeEEEEEcC--CC-eee----
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-----DGTKFVCGGIRGQFYQCDIE--GQ-VLD---- 427 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~s~~~dg~i~iwd~~--~~-~~~---- 427 (604)
+.|+.-..+. ..|+-.|++.|+.+.........+|..++=.. +....+.|-.+..+..||.+ +. .+.
T Consensus 494 ~mil~~~~~~-~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 494 NMILLDPNNP-NKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred ceEeecCCCC-CceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 3444433332 37999999999999988865544455443221 23456788889999999984 32 221
Q ss_pred eee-ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 428 SWE-GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 428 ~~~-~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
.+. +....|++-+.+|. +++|+.+|.|++||--.......+. .+.||..+.++.||+++++.|.. .+.+++.
T Consensus 573 ~Y~~~~~Fs~~aTt~~G~-iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t 646 (794)
T PF08553_consen 573 QYSSKNNFSCFATTEDGY-IAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLLIDT 646 (794)
T ss_pred ccccCCCceEEEecCCce-EEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEEEEE
Confidence 111 12467777777665 8999999999999965444444443 48999999999999999877654 4666664
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0085 Score=60.93 Aligned_cols=236 Identities=16% Similarity=0.175 Sum_probs=126.7
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc-------C---------CCCeeEEEECC
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-------H---------TLGVAYLAWSP 357 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-------h---------~~~V~~l~~sp 357 (604)
...+......+....|||+|+.+|... ++.|.+++...+ ... ..+..| - -+.-..+-|||
T Consensus 35 ~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~--~~~-~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSp 110 (353)
T PF00930_consen 35 ITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATG--QET-QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSP 110 (353)
T ss_dssp EEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTS--EEE-ESES--TTTEEESB--HHHHHHTSSSSBSEEE-T
T ss_pred eEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCC--CeE-EeccccceeEEcCccceeccccccccccceEECC
Confidence 333433367888999999999999885 788999987622 111 111111 0 11235688999
Q ss_pred CCCeEEEEeCCCc----------------------------------eEEEEEECCCceEEE-Eec---CCCCCCeEEEE
Q psy10566 358 DSSHLLVVGPEDC----------------------------------HELWVWNIETELLRV-KLN---HSPEDSLTSCS 399 (604)
Q Consensus 358 d~~~l~s~~~d~~----------------------------------~~i~vwd~~~~~~~~-~~~---~~~~~~v~~~~ 399 (604)
|+++|+....|.. ..+.++|+.+++... ... ......+..+.
T Consensus 111 d~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~ 190 (353)
T PF00930_consen 111 DSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVG 190 (353)
T ss_dssp TSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEE
T ss_pred CCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccce
Confidence 9999998754421 134456665554321 111 12334578899
Q ss_pred EecCCCEEEEEec--CC---eEEEEEcC-CCeeeeeec---e---eEEEEEEc-CCCCE-EEEEeCCCe--EEEEEcCCC
Q psy10566 400 WNRDGTKFVCGGI--RG---QFYQCDIE-GQVLDSWEG---V---RVNCLWCR-SDGKS-VLAADTHHR--IRTYNFEHL 463 (604)
Q Consensus 400 ~~~~~~~l~s~~~--dg---~i~iwd~~-~~~~~~~~~---~---~v~~l~~s-~~g~~-l~~~~~dg~--I~i~d~~~~ 463 (604)
|.+++..|+..-. +. .+.++|.. +..-..... . ......+. +++.. +.....+|. |.+++....
T Consensus 191 W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~ 270 (353)
T PF00930_consen 191 WSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGG 270 (353)
T ss_dssp EEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSS
T ss_pred ecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccc
Confidence 9999884444332 22 45666773 322111111 1 12234443 55554 444455564 666677666
Q ss_pred cccccccCCCCeeE-EEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe
Q psy10566 464 TDSNLLQEDHPVMS-FTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 464 ~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs 536 (604)
....+......|.. +.++++++.++..+.. ..++..++..+..+..+........ ...++|++++++-..
T Consensus 271 ~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~---~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 271 KPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHY---SASFSPDGKYYVDTY 346 (353)
T ss_dssp EEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTE---EEEE-TTSSEEEEEE
T ss_pred ceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCce---EEEECCCCCEEEEEE
Confidence 65556666667744 7788887776644432 2466667762334445554443332 234468888876543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.024 Score=53.45 Aligned_cols=197 Identities=11% Similarity=0.019 Sum_probs=112.9
Q ss_pred eeEEeccCC--CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeE
Q psy10566 339 HRKTLEGHT--LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416 (604)
Q Consensus 339 ~~~~l~~h~--~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 416 (604)
.+.+++ |. .-...+.|..+|..+-+.|..|...|+.+|+.+++..........----.++...+ +.
T Consensus 35 vv~~yp-Hd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l---------- 102 (264)
T PF05096_consen 35 VVETYP-HDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KL---------- 102 (264)
T ss_dssp EEEEEE---TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EE----------
T ss_pred EEEECC-CCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EE----------
Confidence 344444 43 33457888788888999999888899999999998766554322222222222211 11
Q ss_pred EEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 417 YQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 417 ~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
....-.++...+||..+.+....+.....-..++ .+++.++.+.....+
T Consensus 103 -----------------------------~qLTWk~~~~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L 151 (264)
T PF05096_consen 103 -----------------------------YQLTWKEGTGFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRL 151 (264)
T ss_dssp -----------------------------EEEESSSSEEEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEE
T ss_pred -----------------------------EEEEecCCeEEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccce
Confidence 1112234556666666655554444444555555 456677777777788
Q ss_pred EEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC------------C---C
Q psy10566 497 HLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG------------H---T 559 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~------------h---~ 559 (604)
+.+|..+.+..+++.-.... +..+.-+-+ -+|...|=.-....|...|..+|+.+..+.- + .
T Consensus 152 ~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~-i~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~ 230 (264)
T PF05096_consen 152 YFLDPETFKEVRTIQVTDNGRPVSNLNELEY-INGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDD 230 (264)
T ss_dssp EEE-TTT-SEEEEEE-EETTEE---EEEEEE-ETTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TT
T ss_pred EEECCcccceEEEEEEEECCEECCCcEeEEE-EcCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccC
Confidence 88888887776666533221 222222222 2566666555667788889999988776621 1 3
Q ss_pred CCeeEEEEcCCCCcEEEEEe
Q psy10566 560 RTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 560 ~~V~~v~~sp~~~~~l~s~s 579 (604)
...+.+||+|..+.+++||-
T Consensus 231 dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 231 DVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp S-EEEEEEETTTTEEEEEET
T ss_pred CeeEeEeEeCCCCEEEEEeC
Confidence 46799999998777888763
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.014 Score=57.39 Aligned_cols=217 Identities=19% Similarity=0.176 Sum_probs=134.8
Q ss_pred EEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 308 KFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 308 ~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
.|.++.. ++.+--..+.|.-|+.. ++. ...+. +...+.++..-..+..|+++ ..+ +.+++.+++..+..
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~--~g~---~~~~~-~p~~~~~~~~~d~~g~Lv~~-~~g---~~~~~~~~~~~~t~ 100 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPE--TGK---KRVFP-SPGGFSSGALIDAGGRLIAC-EHG---VRLLDPDTGGKITL 100 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCC--cCc---eEEEE-CCCCcccceeecCCCeEEEE-ccc---cEEEeccCCceeEE
Confidence 5667766 44455567778888875 221 12222 33344555554455555554 444 67788776665322
Q ss_pred ecC----CCCCCeEEEEEecCCCEEEEEec-----------CCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEE
Q psy10566 387 LNH----SPEDSLTSCSWNRDGTKFVCGGI-----------RGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 387 ~~~----~~~~~v~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~ 449 (604)
+.. ......+.+...|+|.+.++... -|.++.+|..+...+...++ ..+.++||||++.++.+
T Consensus 101 ~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 101 LAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred eccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEE
Confidence 221 12234667888899887776544 13466666667777777663 57889999999988888
Q ss_pred eCC-CeEEEEEcCC--Ccc---c--ccc-cCCCCeeEEEECCCCCEEEEEecCC-eEEEEecCCCceeeEeeccccceEE
Q psy10566 450 DTH-HRIRTYNFEH--LTD---S--NLL-QEDHPVMSFTIDATDRLALLNVSTQ-GVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 450 ~~d-g~I~i~d~~~--~~~---~--~~~-~~~~~i~~~~~s~~~~~l~~~~~dg-~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
.+. +.|+-|++.. ... . ... ...+..-.+++..+|.+.+++..+| .|.+|+.. ++.+..+...... .
T Consensus 181 DT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~--~ 257 (307)
T COG3386 181 DTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKR--P 257 (307)
T ss_pred eCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCC--C
Confidence 775 7898888863 111 1 111 1245566788888888876555554 89999988 8888888766433 2
Q ss_pred EEeeeCCCCCcEEEEEeC
Q psy10566 520 IHSCFGGANQDFVASGSE 537 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~ 537 (604)
-.++|.+++.+.|+..+.
T Consensus 258 t~~~FgG~~~~~L~iTs~ 275 (307)
T COG3386 258 TNPAFGGPDLNTLYITSA 275 (307)
T ss_pred ccceEeCCCcCEEEEEec
Confidence 334666676665555443
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.067 Score=58.42 Aligned_cols=285 Identities=11% Similarity=0.055 Sum_probs=157.9
Q ss_pred CCcEEEEEEcCCC------CeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 301 CDEVWFCKFSPDG------LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 301 ~~~V~~v~fspdg------~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
...|.|+.++|-| +++|.|.++..+.+--..+.. .......+.+ -...|....|--|..+|+++..||...
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~-~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~ 608 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDL-ILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALL 608 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCc-ceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEE
Confidence 3689999999742 278889888876665443211 1111222222 234566667777788999999999444
Q ss_pred EEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee-------------------------
Q psy10566 373 LWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL------------------------- 426 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------------------------- 426 (604)
-.+.|..+|...-.-. .-...++.--.|+..++.-+.+..|.-..+|.-+++..
T Consensus 609 ~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~l~ 688 (1096)
T KOG1897|consen 609 YFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDSLA 688 (1096)
T ss_pred EEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEeccchHHhhhhcccccccCCceEE
Confidence 4556666664322111 11223344444444333333333333323332222111
Q ss_pred --------------------eeee-ceeEEEEEEcCCCCEEEEEeC-----------C---CeEEEEEcCCCcccccccC
Q psy10566 427 --------------------DSWE-GVRVNCLWCRSDGKSVLAADT-----------H---HRIRTYNFEHLTDSNLLQE 471 (604)
Q Consensus 427 --------------------~~~~-~~~v~~l~~s~~g~~l~~~~~-----------d---g~I~i~d~~~~~~~~~~~~ 471 (604)
++.. +.....+++.+....+.+.+. . ..++++|-++.+.......
T Consensus 689 ~~~~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef 768 (1096)
T KOG1897|consen 689 SANGGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEF 768 (1096)
T ss_pred EecCCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccc
Confidence 1110 112334455443333333221 1 2466777666554433322
Q ss_pred -----CCCeeEEEECCC-CCEEEEEec----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 472 -----DHPVMSFTIDAT-DRLALLNVS----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 472 -----~~~i~~~~~s~~-~~~l~~~~~----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
...+.++.|..| +.++++|+. .|.|.+|.......++....+.-.......+. -+|+++|.-
T Consensus 769 ~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~--fngkllA~I 846 (1096)
T KOG1897|consen 769 ERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE--FNGKLLAGI 846 (1096)
T ss_pred cccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh--hCCeEEEec
Confidence 234555567777 778888864 47788888877444444433322222232233 367776654
Q ss_pred eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+..|++|+..+++.+..-..|..++..+...-. +..++.|.-=+++.+-..+.
T Consensus 847 --n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~-gdeI~VgDlm~Sitll~y~~ 899 (1096)
T KOG1897|consen 847 --NQSVRLYEWTTERELRIECNISNPIIALDLQVK-GDEIAVGDLMRSITLLQYKG 899 (1096)
T ss_pred --CcEEEEEEccccceehhhhcccCCeEEEEEEec-CcEEEEeeccceEEEEEEec
Confidence 668999999998777777778888888888877 77888888777766654433
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.019 Score=54.38 Aligned_cols=197 Identities=12% Similarity=0.103 Sum_probs=106.6
Q ss_pred eecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
+.+.+-...+..++|+|+.. ++|+....+.|...+.+ +.......+.+ .+..-.|++..++.++++.-.++ .+
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~---G~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~--~L 88 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD---GKVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQ--RL 88 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT-----EEEEEE-SS--SSEEEEEE-STTEEEEEETTTT--EE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC---CCEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCC--cE
Confidence 45667777899999999865 55666666777666653 22222233333 35578899988887777655566 78
Q ss_pred EEEECCCce------EEEEe----cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC----Ceeeee----------
Q psy10566 374 WVWNIETEL------LRVKL----NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG----QVLDSW---------- 429 (604)
Q Consensus 374 ~vwd~~~~~------~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~---------- 429 (604)
.++++.... ....+ ...++..+-.++|.+.++.|+++-...-..+|.+.+ ..+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (248)
T PF06977_consen 89 YIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKL 168 (248)
T ss_dssp EEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT-
T ss_pred EEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccc
Confidence 888873311 11111 123456689999999988888887777666666643 111111
Q ss_pred eceeEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccccC----------CCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 430 EGVRVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQE----------DHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 430 ~~~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~~----------~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
....+.++++.|. +..++.+..+..|..+|... .....+.- -...-.++++++|+..+++ ..+..++
T Consensus 169 ~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G-~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~ 246 (248)
T PF06977_consen 169 FVRDLSGLSYDPRTGHLLILSDESRLLLELDRQG-RVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYR 246 (248)
T ss_dssp -SS---EEEEETTTTEEEEEETTTTEEEEE-TT---EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEE
T ss_pred eeccccceEEcCCCCeEEEEECCCCeEEEECCCC-CEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceEEE
Confidence 1124788888886 45566666677888888443 32222211 1357789999998655554 5555554
Q ss_pred E
Q psy10566 499 W 499 (604)
Q Consensus 499 w 499 (604)
|
T Consensus 247 f 247 (248)
T PF06977_consen 247 F 247 (248)
T ss_dssp E
T ss_pred e
Confidence 4
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.024 Score=55.66 Aligned_cols=218 Identities=13% Similarity=0.088 Sum_probs=126.7
Q ss_pred EEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeee-
Q psy10566 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWE- 430 (604)
Q Consensus 353 l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~- 430 (604)
-.|.++...|+-+.--+ +.|+-|+..+++...... .+.+.++.....+..|+++... +.+++.+ +..+..+.
T Consensus 30 P~w~~~~~~L~w~DI~~-~~i~r~~~~~g~~~~~~~---p~~~~~~~~~d~~g~Lv~~~~g--~~~~~~~~~~~~t~~~~ 103 (307)
T COG3386 30 PVWDPDRGALLWVDILG-GRIHRLDPETGKKRVFPS---PGGFSSGALIDAGGRLIACEHG--VRLLDPDTGGKITLLAE 103 (307)
T ss_pred ccCcCCCCEEEEEeCCC-CeEEEecCCcCceEEEEC---CCCcccceeecCCCeEEEEccc--cEEEeccCCceeEEecc
Confidence 35788888777766665 489999998775443332 2334555544445455544332 3444432 22212111
Q ss_pred ------ceeEEEEEEcCCCCEEEEEeC-----------CCeEEEEEcCCCcccccccC-CCCeeEEEECCCCCEEEEEec
Q psy10566 431 ------GVRVNCLWCRSDGKSVLAADT-----------HHRIRTYNFEHLTDSNLLQE-DHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 431 ------~~~v~~l~~s~~g~~l~~~~~-----------dg~I~i~d~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~ 492 (604)
..+.+...+.|+|...+.... -|.++.+|. .+........ -...+.++||||++.++.+..
T Consensus 104 ~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT 182 (307)
T COG3386 104 PEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADT 182 (307)
T ss_pred ccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeC
Confidence 125778889999887665444 133555554 2333333332 455678999999988887766
Q ss_pred C-CeEEEEecCC--Cceee----E-eeccccceEEEEeeeCCCCCcEEEEEeCCC-cEEEEeCCCCcceEEeeCCCCCee
Q psy10566 493 T-QGVHLWDLRD--RILLR----K-FQGVTQGQFTIHSCFGGANQDFVASGSEDG-KVYIWHVKRELPIATLSGHTRTVS 563 (604)
Q Consensus 493 d-g~I~lwd~~~--~~~~~----~-~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg-~I~iwd~~~~~~~~~l~~h~~~V~ 563 (604)
. +.|+-|++.. +..-. . +....+..-. +....+|++.+++-.+| .|.+|+.. |+++..+.-+...++
T Consensus 183 ~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG---~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t 258 (307)
T COG3386 183 PANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDG---MAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPT 258 (307)
T ss_pred CCCeEEEEecCcccCccCCcceEEEccCCCCCCCc---eEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCc
Confidence 4 7788887752 21111 1 1111111111 12235676665555554 89999988 999999988877888
Q ss_pred EEEEc-CCCCcEEEEEeCC
Q psy10566 564 CVAWN-PVYHQMIASVSDD 581 (604)
Q Consensus 564 ~v~~s-p~~~~~l~s~s~D 581 (604)
+++|- |+...+++|+...
T Consensus 259 ~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 259 NPAFGGPDLNTLYITSARS 277 (307)
T ss_pred cceEeCCCcCEEEEEecCC
Confidence 88885 4434555555544
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.028 Score=58.69 Aligned_cols=240 Identities=16% Similarity=0.131 Sum_probs=133.2
Q ss_pred eeEEEECCCCCeEEEEeC-CC--ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----------e
Q psy10566 350 VAYLAWSPDSSHLLVVGP-ED--CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----------Q 415 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~-d~--~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----------~ 415 (604)
+...++|||+++++.+-. .| ...++++|+.+|+.+...... .....+.|.++++.|+....+. .
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 446789999999886532 22 247999999999876543211 1123499999998887765433 3
Q ss_pred EEEEEcCC---C--eeeeeece-e-EEEEEEcCCCCEEEEEeCC----CeEEEEEcCCC-----cccccccCCCCeeEEE
Q psy10566 416 FYQCDIEG---Q--VLDSWEGV-R-VNCLWCRSDGKSVLAADTH----HRIRTYNFEHL-----TDSNLLQEDHPVMSFT 479 (604)
Q Consensus 416 i~iwd~~~---~--~~~~~~~~-~-v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~-----~~~~~~~~~~~i~~~~ 479 (604)
|+.|.+.. . .+..-... . ...+..++++++++..... ..+.+.|+... ....+......+....
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v 283 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYV 283 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEE
Confidence 77777732 1 22222222 2 6678899999997765433 34788888764 2223333333343333
Q ss_pred ECCCCCEEEEEec---CCeEEEEecCCCce---eeEeeccccceEEEEeeeCCCCCcEEEEEeCCC--cEEEEeCCCCcc
Q psy10566 480 IDATDRLALLNVS---TQGVHLWDLRDRIL---LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG--KVYIWHVKRELP 551 (604)
Q Consensus 480 ~s~~~~~l~~~~~---dg~I~lwd~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg--~I~iwd~~~~~~ 551 (604)
-+..+.+++.... .+.|...++.+... ...+..+..... +..+.. -.+.+++....++ .|++++...+..
T Consensus 284 ~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~-l~~~~~-~~~~Lvl~~~~~~~~~l~v~~~~~~~~ 361 (414)
T PF02897_consen 284 DHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVS-LEDVSL-FKDYLVLSYRENGSSRLRVYDLDDGKE 361 (414)
T ss_dssp EEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEE-EEEEEE-ETTEEEEEEEETTEEEEEEEETT-TEE
T ss_pred EccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCcee-EEEEEE-ECCEEEEEEEECCccEEEEEECCCCcE
Confidence 3334444443322 35677778777653 223333333222 222221 2344555555555 588899984444
Q ss_pred eEEeeC-CCCCeeEEEEcCCCCcEEEEEeCC---CcEEEECCCCCC
Q psy10566 552 IATLSG-HTRTVSCVAWNPVYHQMIASVSDD---CTVRIWGPHLNT 593 (604)
Q Consensus 552 ~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~D---g~I~iW~~~~~~ 593 (604)
...+.. -.+.|..+...++...+.++.+.- +++.-||+.+++
T Consensus 362 ~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~ 407 (414)
T PF02897_consen 362 SREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGE 407 (414)
T ss_dssp EEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTC
T ss_pred EeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCC
Confidence 444443 345567777666655565555543 568888888775
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.70 E-value=4e-05 Score=78.31 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=138.8
Q ss_pred CCeeEEEECCCCC--eEEEEeCCCceEEEEEECCCceEE-EEecCCCCCCeEEEEEec-CCCEEEEEe----cCCeEEEE
Q psy10566 348 LGVAYLAWSPDSS--HLLVVGPEDCHELWVWNIETELLR-VKLNHSPEDSLTSCSWNR-DGTKFVCGG----IRGQFYQC 419 (604)
Q Consensus 348 ~~V~~l~~spd~~--~l~s~~~d~~~~i~vwd~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~s~~----~dg~i~iw 419 (604)
..+.|+++.-+.+ .+++|..+| .|-+-.+....-. ..+..++...+++++|++ |.+.||+|- .|..+.+|
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG--~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATG--NISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred CCceeehhhcCCchhhhhhccccC--ceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 3456666654433 455555565 7777766544322 444456778899999999 556666663 24578999
Q ss_pred EcCCCeee-----eee---ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-CCCEEEEE
Q psy10566 420 DIEGQVLD-----SWE---GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-TDRLALLN 490 (604)
Q Consensus 420 d~~~~~~~-----~~~---~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~ 490 (604)
|+...... .+. .....++++..+.+.+++|.....++++|++........-....+..+.++| .+.++++.
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceecc
Confidence 99543111 111 1245678888899999999999999999998543333222334567788888 66666655
Q ss_pred ecCCeEEEEe-cCCC-ceeeEeecccc----ceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCC--------cceEE-
Q psy10566 491 VSTQGVHLWD-LRDR-ILLRKFQGVTQ----GQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRE--------LPIAT- 554 (604)
Q Consensus 491 ~~dg~I~lwd-~~~~-~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~--------~~~~~- 554 (604)
. ||.|.+|| .++- .++..+..... ....+..|... .| .+++.+. .++|+.+|+..- .....
T Consensus 215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtr-tg-lla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~ 291 (783)
T KOG1008|consen 215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTR-TG-LLAVLSRDSITIRLYDICVVGTEGSANNSVFVNY 291 (783)
T ss_pred c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCC-cc-hhhhhccCcceEEEecccccCCcccccccceeee
Confidence 4 99999999 3332 22332222222 13445444442 34 4455544 578999998621 11111
Q ss_pred -----eeCC--CCCeeEEEEcCCC-CcEEEEEeCCCcEEEECC
Q psy10566 555 -----LSGH--TRTVSCVAWNPVY-HQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 555 -----l~~h--~~~V~~v~~sp~~-~~~l~s~s~Dg~I~iW~~ 589 (604)
++.. -..|.+..||+.. -.....+-..-.+.-+++
T Consensus 292 ~s~~~~q~~~~~s~I~~f~wH~~s~~er~il~~~nl~~~Df~V 334 (783)
T KOG1008|consen 292 ESKYPVQPNSQCSGIDFFTWHTASPTERQILGVINLQPKDFSV 334 (783)
T ss_pred cccccccccccccceeecCcCcCCccceeEEeeccCChhhccc
Confidence 1111 2568888888763 123344444444444444
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.032 Score=54.53 Aligned_cols=219 Identities=14% Similarity=0.133 Sum_probs=127.8
Q ss_pred CCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC---Ceee------
Q psy10566 357 PDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG---QVLD------ 427 (604)
Q Consensus 357 pd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~------ 427 (604)
..++.|+.|+.+| +++++........... ....|..+...++-+.+++-+ |+.+++++++. ....
T Consensus 5 ~~~~~L~vGt~~G---l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 5 SWGDRLLVGTEDG---LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred cCCCEEEEEECCC---EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccc
Confidence 4577899998887 8999984333333332 223499999999877777665 49999999841 1100
Q ss_pred -------eeec-eeEEEEE--EcCCCCEEEEEeCCCeEEEEEcCCC-----cccccccCCCCeeEEEECCCCCEEEEEec
Q psy10566 428 -------SWEG-VRVNCLW--CRSDGKSVLAADTHHRIRTYNFEHL-----TDSNLLQEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 428 -------~~~~-~~v~~l~--~s~~g~~l~~~~~dg~I~i~d~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
.... ..+...+ -...+...++.....+|.+|..... .....+.....+.+++|. ++.++++..
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTS 156 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeC
Confidence 1111 1233333 2234555555566669999888763 222334456788888888 667777775
Q ss_pred CCeEEEEecCCCceeeEeecccc---------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE--EeeCCCCC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQ---------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA--TLSGHTRT 561 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~--~l~~h~~~ 561 (604)
++ ..+.|+.++.....+..... ....+..... +++.++++. |..-.+.| ..|++.. .+.- ...
T Consensus 157 ~~-f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~-~~G~~~r~~~i~W-~~~ 230 (275)
T PF00780_consen 157 KG-FYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVN-KNGEPSRKSTIQW-SSA 230 (275)
T ss_pred Cc-eEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEc-CCCCcCcccEEEc-CCc
Confidence 54 88899987755443321111 1112222222 456677654 33333334 3455443 3332 335
Q ss_pred eeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 562 VSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 562 V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.++++.. .+|+..+. +.|.||++.+++
T Consensus 231 p~~~~~~~---pyli~~~~-~~iEV~~~~~~~ 258 (275)
T PF00780_consen 231 PQSVAYSS---PYLIAFSS-NSIEVRSLETGE 258 (275)
T ss_pred hhEEEEEC---CEEEEECC-CEEEEEECcCCc
Confidence 66777753 35555555 459999999986
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0053 Score=56.42 Aligned_cols=141 Identities=10% Similarity=-0.002 Sum_probs=92.3
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
.+++.|+..+.+.-.|..++.......-...+.+-+.- -|++++.|+..|.+++.+.++|.....+.....-. ++..
T Consensus 24 T~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk--~~a~ 100 (354)
T KOG4649|consen 24 TLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVK--VRAQ 100 (354)
T ss_pred eEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhc--cceE
Confidence 45666777777777777776655444444455444433 57789999999999999999998877776433221 1111
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
..+++..|.+|+.|++.+..|.++..++...+...+.-.+-+..|- ...|..+...|.|.--..
T Consensus 101 -~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g-~~sly~a~t~G~vlavt~ 164 (354)
T KOG4649|consen 101 -CDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPG-DGSLYAAITAGAVLAVTK 164 (354)
T ss_pred -EcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCC-CceEEEEeccceEEEEcc
Confidence 2478899999999999999999999988887654443344455553 222333333444433333
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.025 Score=56.73 Aligned_cols=179 Identities=13% Similarity=0.109 Sum_probs=107.4
Q ss_pred CCeEEEEEC----------CCeEEEEEeCCC---CceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 313 GLKLATGSK----------DTTVIIWDVDPV---TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 313 g~~lasgs~----------dg~i~iwd~~~~---~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
..+|+.|+. .|.|.++++... ....+.+.... ..++|++++-- ++ +|+++... .|.+|++.
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~-~~g~V~ai~~~-~~-~lv~~~g~---~l~v~~l~ 115 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTE-VKGPVTAICSF-NG-RLVVAVGN---KLYVYDLD 115 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEE-ESS-EEEEEEE-TT-EEEEEETT---EEEEEEEE
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEe-ecCcceEhhhh-CC-EEEEeecC---EEEEEEcc
Confidence 458887752 288999999842 12333333333 46889998866 33 46555544 59999988
Q ss_pred Cce-EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc--CCCeeeeee----ceeEEEEEEcCCCCEEEEEeCC
Q psy10566 380 TEL-LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI--EGQVLDSWE----GVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 380 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~----~~~v~~l~~s~~g~~l~~~~~d 452 (604)
..+ ............+.++... ++++++|.....+.++.. ++..+.... ...+.++.+-++++.+++++.+
T Consensus 116 ~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~ 193 (321)
T PF03178_consen 116 NSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKD 193 (321)
T ss_dssp TTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETT
T ss_pred CcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCC
Confidence 877 5544443333356665554 569999998888877744 444333332 2358888888666799999999
Q ss_pred CeEEEEEcCCCc-----------ccccccCCCCeeEE---EECC--CCC------EEEEEecCCeEEEE
Q psy10566 453 HRIRTYNFEHLT-----------DSNLLQEDHPVMSF---TIDA--TDR------LALLNVSTQGVHLW 499 (604)
Q Consensus 453 g~I~i~d~~~~~-----------~~~~~~~~~~i~~~---~~s~--~~~------~l~~~~~dg~I~lw 499 (604)
|.+.++...... ....+..+..|+++ ++.| .+. .++.++.+|.|...
T Consensus 194 gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 194 GNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp SEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred CeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 999999886321 11112235667777 5555 222 47888888888743
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00017 Score=45.74 Aligned_cols=38 Identities=42% Similarity=0.641 Sum_probs=34.1
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd 329 (604)
.+...+..|...|.++.|++++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 34567778999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.06 Score=55.70 Aligned_cols=68 Identities=16% Similarity=0.314 Sum_probs=44.3
Q ss_pred EEEcCCCCeEEEEECC----------C-eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 307 CKFSPDGLKLATGSKD----------T-TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 307 v~fspdg~~lasgs~d----------g-~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
++.+|.|..+|....+ . .|.||+.. +..+..+.-..+.|.++.|+.+. .|++...+| .+++
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-----G~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG--~v~v 105 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS-----GKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDG--TVRV 105 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECCC-----CCEeEEEEECCCCEEEEEECCCC-eEEEEEcCC--EEEE
Confidence 4556666666655433 1 58888875 33344433333889999999865 566667787 8999
Q ss_pred EECCCce
Q psy10566 376 WNIETEL 382 (604)
Q Consensus 376 wd~~~~~ 382 (604)
+|+....
T Consensus 106 y~~~G~~ 112 (410)
T PF04841_consen 106 YDLFGEF 112 (410)
T ss_pred EeCCCce
Confidence 9986433
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00067 Score=69.67 Aligned_cols=95 Identities=20% Similarity=0.239 Sum_probs=80.5
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCee-EEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA-YLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~-~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
.-.|..+.|+|.-.++|++..+|.|.+..++ ++.+.+++-|...++ +++|.|||+.|++|-.|| +|++.|++
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-----~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG--~I~L~Dve 92 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-----WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDG--TIRLHDVE 92 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-----cceeEeccCCCCccceeeeecCCCCEEEEEecCC--eEEEEEcc
Confidence 3568889999999999999999999999875 556777877777777 999999999999999998 99999999
Q ss_pred CceEEEEecCCCCCCeEEEEEec
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNR 402 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~ 402 (604)
++..+..........|.++-|.+
T Consensus 93 ~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 93 KGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred CCCceeccccccccchheeeccc
Confidence 99888775545567788888863
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00036 Score=44.14 Aligned_cols=39 Identities=41% Similarity=0.681 Sum_probs=34.4
Q ss_pred CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 549 ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 549 ~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
++++..+..|...|+++.|+|. ..++++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPD-GKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCC-CCEEEEecCCCeEEEcC
Confidence 4556777889999999999998 68999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.1 Score=52.14 Aligned_cols=223 Identities=11% Similarity=0.084 Sum_probs=114.8
Q ss_pred EECCCCCeEEEEeC-CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---eeeee
Q psy10566 354 AWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ---VLDSW 429 (604)
Q Consensus 354 ~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~ 429 (604)
+|.+||+.|+.++. ++...+++.|+.+++..+...... .......++|+++.++-......+.-.|++.. .+..+
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g-~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG-DNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS--B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCC-CCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 67889977766555 665689999999998776665332 22335667788888877666678888888543 33333
Q ss_pred eceeEEEEE--EcCCCCEEEEEeC----------------------CCeEEEEEcCCCcccccccCCCCeeEEEECCCCC
Q psy10566 430 EGVRVNCLW--CRSDGKSVLAADT----------------------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR 485 (604)
Q Consensus 430 ~~~~v~~l~--~s~~g~~l~~~~~----------------------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~ 485 (604)
...-+-... .+.++..++-.-. ...|...|+.+++...++.....+..+.++|...
T Consensus 121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp 200 (386)
T PF14583_consen 121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDP 200 (386)
T ss_dssp -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEE
T ss_pred CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCC
Confidence 333222222 3445555433211 2457777888888777788888899999999887
Q ss_pred EEEEEecCCe-----EEEEecCC-CceeeEeeccccceEEEEeeeCCCCCcEEEEEe-----CCCcEEEEeCCCCcceEE
Q psy10566 486 LALLNVSTQG-----VHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQDFVASGS-----EDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 486 ~l~~~~~dg~-----I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs-----~dg~I~iwd~~~~~~~~~ 554 (604)
.++.=|..|- -+||-+++ +...+.+..+.. ...+.-=+|.++|..|.--+ .+..|.-+|..+++....
T Consensus 201 ~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~-~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~ 279 (386)
T PF14583_consen 201 TLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRME-GESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRL 279 (386)
T ss_dssp EEEEEEE-S-TTTSS-SEEEEETTS---EESS---T-TEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEE
T ss_pred CEEEEeccCCcceeceEEEEEEcCCCcceeeecCCC-CcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEE
Confidence 6666655442 35665543 334444444433 33455567789998776432 244677788888765432
Q ss_pred eeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 555 LSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 555 l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
... .....+--+++ +.+++-=+.|
T Consensus 280 ~~~--p~~~H~~ss~D-g~L~vGDG~d 303 (386)
T PF14583_consen 280 MEM--PWCSHFMSSPD-GKLFVGDGGD 303 (386)
T ss_dssp EEE---SEEEEEE-TT-SSEEEEEE--
T ss_pred EeC--CceeeeEEcCC-CCEEEecCCC
Confidence 221 23344555777 6776654443
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.18 Score=54.52 Aligned_cols=230 Identities=13% Similarity=0.062 Sum_probs=123.5
Q ss_pred cCCCCeEEEEECCC------eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-C---ceEEEEEECC
Q psy10566 310 SPDGLKLATGSKDT------TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-D---CHELWVWNIE 379 (604)
Q Consensus 310 spdg~~lasgs~dg------~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-~---~~~i~vwd~~ 379 (604)
+..+.+++.||.++ .+..+|.. +..+.....+.. ...-.+++.. ++...++||.+ + ..++..||..
T Consensus 282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~--~~~w~~~a~m~~-~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~ 357 (571)
T KOG4441|consen 282 SVSGKLVAVGGYNRQGQSLRSVECYDPK--TNEWSSLAPMPS-PRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPR 357 (571)
T ss_pred CCCCeEEEECCCCCCCcccceeEEecCC--cCcEeecCCCCc-ccccccEEEE-CCEEEEEccccCCCcccceEEEecCC
Confidence 33455677777663 57788876 334444444442 2233444444 34677788877 2 1278999998
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~ 451 (604)
+++....-. -.......-.-.-+|...++||.|| ++..||............ +-..-...-+|...++|+.
T Consensus 358 ~~~W~~~a~-M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~ 436 (571)
T KOG4441|consen 358 TNQWTPVAP-MNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGG 436 (571)
T ss_pred CCceeccCC-ccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCc
Confidence 887443211 1111111111122788999999997 466777755443332221 2233334456777788875
Q ss_pred CC------eEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecCCe-----EEEEecCCCceeeEeeccccceE
Q psy10566 452 HH------RIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQG-----VHLWDLRDRILLRKFQGVTQGQF 518 (604)
Q Consensus 452 dg------~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~-----I~lwd~~~~~~~~~~~~~~~~~~ 518 (604)
++ ++..||..+..-.....- ...-..++ .-++...++|+.|+. |..||..+.+-... ........
T Consensus 437 ~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v-~~m~~~rs 514 (571)
T KOG4441|consen 437 DGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWTMV-APMTSPRS 514 (571)
T ss_pred CCCccccceEEEEcCCCCceeecCCcccccccceEE-EECCEEEEECCccCCCccceEEEEcCCCCceeEc-ccCccccc
Confidence 53 577888877543322221 11111122 226677777877763 77888877543322 11111111
Q ss_pred EEEeeeCCCCCcEEEEEeCCC-----cEEEEeCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDG-----KVYIWHVKR 548 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg-----~I~iwd~~~ 548 (604)
....+. -++...++|+.|| +|..||..+
T Consensus 515 ~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 515 AVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred cccEEE--ECCEEEEEecccCccccceeEEcCCCC
Confidence 221122 3667788888775 455565544
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.002 Score=70.24 Aligned_cols=137 Identities=11% Similarity=0.112 Sum_probs=89.3
Q ss_pred CCCeEEEEEcCCCcccccccCCCCeeEEEECCC-------CCEEEEEecCCeEEEEecCCCc-eeeEeeccc-cceEEEE
Q psy10566 451 THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT-------DRLALLNVSTQGVHLWDLRDRI-LLRKFQGVT-QGQFTIH 521 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~-------~~~l~~~~~dg~I~lwd~~~~~-~~~~~~~~~-~~~~~i~ 521 (604)
....++-.|++.++..........+.-..+.|+ ....++|-.++.+..||.+-.. .+..-..+. .......
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs 581 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFS 581 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCce
Confidence 457799999999887766654443334444443 3456788889999999998632 221111111 1112334
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+++...+ .+||.||.+|.||+||.-..+....+.+-..+|.+|..+.||..+|||| +..+.+++..
T Consensus 582 ~~aTt~~-G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlLi~t~ 647 (794)
T PF08553_consen 582 CFATTED-GYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC--KTYLLLIDTL 647 (794)
T ss_pred EEEecCC-ceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee--cceEEEEEEe
Confidence 4444444 4899999999999999543333445667789999999999965666665 4567777753
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.017 Score=46.40 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=67.5
Q ss_pred eEEEEEec---CC-CEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc
Q psy10566 395 LTSCSWNR---DG-TKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470 (604)
Q Consensus 395 v~~~~~~~---~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~ 470 (604)
|+++++.. +| +.|++|+.|..|++|+-+.-....-....+.+++-... ..++.+..+|+|-+|+-... .....
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R--lWRiK 78 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQR--LWRIK 78 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeCcce--eeeec
Confidence 56666655 32 68999999999999987644444444557888887776 56999999999999986332 22233
Q ss_pred CCCCeeEEEECC-C--C-CEEEEEecCCeEE
Q psy10566 471 EDHPVMSFTIDA-T--D-RLALLNVSTQGVH 497 (604)
Q Consensus 471 ~~~~i~~~~~s~-~--~-~~l~~~~~dg~I~ 497 (604)
.+..++++.+.. + | ..|++|-++|.|-
T Consensus 79 SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 79 SKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred cCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 344455555433 2 2 3688888888764
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.38 Score=51.61 Aligned_cols=233 Identities=12% Similarity=0.085 Sum_probs=128.8
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEec--cCCCCeeEEEECC---CCCeEEEEeC------CCceEEEEEECCCce
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLE--GHTLGVAYLAWSP---DSSHLLVVGP------EDCHELWVWNIETEL 382 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~--~h~~~V~~l~~sp---d~~~l~s~~~------d~~~~i~vwd~~~~~ 382 (604)
..++.++.|+.+.-.|..+ ++.+-... .+... ..+.-+| ++ .++++.. ++ .|..+|.++|+
T Consensus 121 ~~v~v~t~dg~l~ALDa~T----Gk~~W~~~~~~~~~~-~~~tssP~v~~g-~Vivg~~~~~~~~~G--~v~AlD~~TG~ 192 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKT----GKVVWSKKNGDYKAG-YTITAAPLVVKG-KVITGISGGEFGVRG--YVTAYDAKTGK 192 (527)
T ss_pred CEEEEEcCCCEEEEEECCC----CCEEeeccccccccc-ccccCCcEEECC-EEEEeecccccCCCc--EEEEEECCCCc
Confidence 3566677888888888773 22222221 11110 0111112 34 4444432 34 79999999998
Q ss_pred EEEEecCCCCC------------------------------Ce-EEEEEecCCCEEEEEecC-----C-----------e
Q psy10566 383 LRVKLNHSPED------------------------------SL-TSCSWNRDGTKFVCGGIR-----G-----------Q 415 (604)
Q Consensus 383 ~~~~~~~~~~~------------------------------~v-~~~~~~~~~~~l~s~~~d-----g-----------~ 415 (604)
.+-++...... .+ ..+++.+....++.+..+ + .
T Consensus 193 ~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s 272 (527)
T TIGR03075 193 LVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSS 272 (527)
T ss_pred eeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCcccee
Confidence 77665432111 11 123566666666665522 2 3
Q ss_pred EEEEEc-CCCeeeeeec--e---------eEEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCccccc--------c---
Q psy10566 416 FYQCDI-EGQVLDSWEG--V---------RVNCLWCRSDGK---SVLAADTHHRIRTYNFEHLTDSNL--------L--- 469 (604)
Q Consensus 416 i~iwd~-~~~~~~~~~~--~---------~v~~l~~s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~--------~--- 469 (604)
|.-.|+ +|+..-.+.. | ...-+....+|+ .++.+..+|.+++.|-.+++.... .
T Consensus 273 ~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~ 352 (527)
T TIGR03075 273 IVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATG 352 (527)
T ss_pred EEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccc
Confidence 444555 3555443332 1 122223334665 677899999999999988765310 0
Q ss_pred -cCC--CC----------------------------eeEEEECCCCCEEEEEecC-------------------------
Q psy10566 470 -QED--HP----------------------------VMSFTIDATDRLALLNVST------------------------- 493 (604)
Q Consensus 470 -~~~--~~----------------------------i~~~~~s~~~~~l~~~~~d------------------------- 493 (604)
... .+ -..++++|+..++++...+
T Consensus 353 ~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 432 (527)
T TIGR03075 353 VDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTI 432 (527)
T ss_pred cCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceecccccc
Confidence 000 00 0125667766666554433
Q ss_pred --------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC
Q psy10566 494 --------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 494 --------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h 558 (604)
|.+.-+|+.+++..-.+.......... +. ..+.+++.++.||.++.+|.++|+.+..++-.
T Consensus 433 ~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~--l~--t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 433 KPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGV--LA--TAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred CCCCCCCceeEEEEeCCCCceeeEecCCCCCCCcc--eE--ECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence 347778888887766554322111111 11 24457778888999999999999999888654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.31 Score=49.96 Aligned_cols=270 Identities=11% Similarity=0.121 Sum_probs=141.7
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-----CCCeEEEEeCCCceEEEEEECCC--c----
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-----DSSHLLVVGPEDCHELWVWNIET--E---- 381 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-----d~~~l~s~~~d~~~~i~vwd~~~--~---- 381 (604)
...|++||..|.++||+..........+.--..-..+|..+..-+ +...|++-.-. .+.+|.+.. |
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~---kl~vY~v~~~~g~~~~ 113 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPR---KLSVYSVSLVDGTVEH 113 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCC---EEEEEEEEecCCCccc
Confidence 358999999999999998633222111111111346777776532 23344443333 577777621 1
Q ss_pred ----eEEEEecCCCCCCeEEEEEec----C-CCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 382 ----LLRVKLNHSPEDSLTSCSWNR----D-GTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 382 ----~~~~~~~~~~~~~v~~~~~~~----~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
.....+.+........+++-| . ..++.+-+.||.+.+|+-+.-....+-.. -...+.+.+.-..+++++
T Consensus 114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~s 193 (418)
T PF14727_consen 114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTAS 193 (418)
T ss_pred CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEec
Confidence 111222222233344555544 2 35777889999999999876554333222 245678888888999999
Q ss_pred CCCeEEEEEcCCCccc-----------------------ccccCCCCeeEEEE---CCCCCEEEEEecCCeEEEEecCCC
Q psy10566 451 THHRIRTYNFEHLTDS-----------------------NLLQEDHPVMSFTI---DATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~-----------------------~~~~~~~~i~~~~~---s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.+..+..|........ ..+.-+.++..+.. +.....+++-+. ..+.+.+- +|
T Consensus 194 ss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLge-r~Lf~l~~-~G 271 (418)
T PF14727_consen 194 SSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLGE-RSLFCLKD-NG 271 (418)
T ss_pred CceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEec-ceEEEEcC-CC
Confidence 9999998886331100 01111333333333 223333333332 34555553 33
Q ss_pred cee--eEeeccccceEEEEee-eCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEE---EcCCCCcEEEE
Q psy10566 505 ILL--RKFQGVTQGQFTIHSC-FGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVA---WNPVYHQMIAS 577 (604)
Q Consensus 505 ~~~--~~~~~~~~~~~~i~~~-~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~---~sp~~~~~l~s 577 (604)
... +++............. ...++ +..++.++.++++.||.-. +++..-.....+| ++. |..- ..+|++
T Consensus 272 ~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~--~L~WsA~l~~~PV-al~v~~~~~~-~G~IV~ 347 (418)
T PF14727_consen 272 SLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDT--TLVWSAQLPHVPV-ALSVANFNGL-KGLIVS 347 (418)
T ss_pred eEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCC--eEEEecCCCCCCE-EEEecccCCC-CceEEE
Confidence 322 2222221111111110 11122 2358888899999998643 3333333223333 332 3333 678999
Q ss_pred EeCCCcEEEECCCC
Q psy10566 578 VSDDCTVRIWGPHL 591 (604)
Q Consensus 578 ~s~Dg~I~iW~~~~ 591 (604)
-+.+|.+.+-=+-+
T Consensus 348 Ls~~G~L~v~YLGT 361 (418)
T PF14727_consen 348 LSDEGQLSVSYLGT 361 (418)
T ss_pred EcCCCcEEEEEeCC
Confidence 99999998864433
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.025 Score=45.49 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=71.3
Q ss_pred eeEEEECC---CC-CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe
Q psy10566 350 VAYLAWSP---DS-SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV 425 (604)
Q Consensus 350 V~~l~~sp---d~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 425 (604)
|+++++.. || +.|++|+.|. .|++|+-+ ..+..+. ..+.|++++-... ..|+.+..+|+|-+|+-..+.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~--~IRvf~~~--e~~~Ei~--e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~Rl 74 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDF--EIRVFKGD--EIVAEIT--ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRL 74 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCc--EEEEEeCC--cEEEEEe--cccceEEEEEcCC-CEEEEEecCCEEEEEeCccee
Confidence 56666644 32 5788889888 89999855 4455554 3466888877655 679999999999999987766
Q ss_pred eeeeeceeEEEEEEcCC---C-CEEEEEeCCCeEE
Q psy10566 426 LDSWEGVRVNCLWCRSD---G-KSVLAADTHHRIR 456 (604)
Q Consensus 426 ~~~~~~~~v~~l~~s~~---g-~~l~~~~~dg~I~ 456 (604)
.+.-..+++.++.+..- | ..|++|-.+|.|-
T Consensus 75 WRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 75 WRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 66666666777665442 2 2588888888764
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.26 Score=50.32 Aligned_cols=84 Identities=19% Similarity=0.253 Sum_probs=60.7
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCC---------------Cc-EEEEEeC
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN---------------QD-FVASGSE 537 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------~~-~l~sgs~ 537 (604)
.+.+++.+|++++.++...-|.|.++|+.++..++.++|..........+.-..+ .. +++-+-.
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyapr 388 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPR 388 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEecc
Confidence 4778999999999999888899999999999999988887654332211111111 11 2334456
Q ss_pred CCcEEEEeCCCCcceEEeeC
Q psy10566 538 DGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 538 dg~I~iwd~~~~~~~~~l~~ 557 (604)
-|.|.||.+++|..+..+..
T Consensus 389 Rg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 389 RGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred CCeEEEEecCCCCEEEEEEe
Confidence 78999999999988877754
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.051 Score=58.65 Aligned_cols=215 Identities=14% Similarity=0.078 Sum_probs=122.3
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C-----eEEEEEcCCCeeeeeece---eEEEEEEcCC
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G-----QFYQCDIEGQVLDSWEGV---RVNCLWCRSD 442 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g-----~i~iwd~~~~~~~~~~~~---~v~~l~~s~~ 442 (604)
.+..+|..++.............-.+++.. ++...++||.| | .+..||............ +...-...-+
T Consensus 302 ~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~ 380 (571)
T KOG4441|consen 302 SVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLD 380 (571)
T ss_pred eeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEEC
Confidence 688889888755444333333333444444 56788899988 3 567778765443332221 2333333446
Q ss_pred CCEEEEEeCCC-----eEEEEEcCCCcccccccCCCCeeEEE-ECCCCCEEEEEecCC------eEEEEecCCCceeeEe
Q psy10566 443 GKSVLAADTHH-----RIRTYNFEHLTDSNLLQEDHPVMSFT-IDATDRLALLNVSTQ------GVHLWDLRDRILLRKF 510 (604)
Q Consensus 443 g~~l~~~~~dg-----~I~i~d~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~dg------~I~lwd~~~~~~~~~~ 510 (604)
|...++|+.|| ++..||..+.+-...-.......... ..-+|...++|+.++ ++..||..++.-...-
T Consensus 381 g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~ 460 (571)
T KOG4441|consen 381 GKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIA 460 (571)
T ss_pred CEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecC
Confidence 78888888886 47788877765433332222222222 233677777777554 4788888776432211
Q ss_pred eccccceEEEEeeeCCCCCcEEEEEeCCC-----cEEEEeCCCCcce--EEeeCCCCCeeEEEEcCCCCcEEEEEeCCC-
Q psy10566 511 QGVTQGQFTIHSCFGGANQDFVASGSEDG-----KVYIWHVKRELPI--ATLSGHTRTVSCVAWNPVYHQMIASVSDDC- 582 (604)
Q Consensus 511 ~~~~~~~~~i~~~~~~~~~~~l~sgs~dg-----~I~iwd~~~~~~~--~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg- 582 (604)
...... .....+. -++.+.+.|+.|+ +|..||..+.+-. .........+..+.+. +.+.+.|+.||
T Consensus 461 ~M~~~R-~~~g~a~--~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~---~~ly~vGG~~~~ 534 (571)
T KOG4441|consen 461 PMNTRR-SGFGVAV--LNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLG---GKLYAVGGFDGN 534 (571)
T ss_pred Cccccc-ccceEEE--ECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEEC---CEEEEEecccCc
Confidence 111111 1111121 4677888888776 3778888765432 2223233333334443 67888998886
Q ss_pred ----cEEEECCCCCC
Q psy10566 583 ----TVRIWGPHLNT 593 (604)
Q Consensus 583 ----~I~iW~~~~~~ 593 (604)
+|..||+.+.+
T Consensus 535 ~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 535 NNLNTVECYDPETDT 549 (571)
T ss_pred cccceeEEcCCCCCc
Confidence 57888887765
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0014 Score=59.11 Aligned_cols=143 Identities=10% Similarity=0.126 Sum_probs=89.9
Q ss_pred EEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-ceeeEeeccccceEEEEe
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR-ILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~-~~~~~~~~~~~~~~~i~~ 522 (604)
+...+.++.|.-++++..+...... +... .....-+..+++|+.+|.|++|...-. .....+...... ....
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~--i~~~ 107 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEES--IDLG 107 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHHhhhccccc--ceec
Confidence 4455667777777766533211110 1111 223334677999999999999987621 111111111111 1111
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC-CCeeEEEEcCCCCcEEEEE--eCCCcEEEECCCCCCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT-RTVSCVAWNPVYHQMIASV--SDDCTVRIWGPHLNTN 594 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-~~V~~v~~sp~~~~~l~s~--s~Dg~I~iW~~~~~~~ 594 (604)
+....++.+..+++.||.|+.|++.-++.+.....|. .++.....+.. +.+++++ |.|..++.|++..-..
T Consensus 108 Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~s-d~~i~~a~~S~d~~~k~W~ve~~~d 181 (238)
T KOG2444|consen 108 IPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGS-DEFLKIADTSHDRVLKKWNVEKIKD 181 (238)
T ss_pred cccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecC-CceEEeeccccchhhhhcchhhhhc
Confidence 2233456689999999999999999998888887787 56666666555 6778887 8889999999876553
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.63 Score=51.69 Aligned_cols=238 Identities=10% Similarity=0.031 Sum_probs=117.6
Q ss_pred CcEEEEEEcCCCCeEEEEECC-C----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc----eE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKD-T----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC----HE 372 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~d-g----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~----~~ 372 (604)
-.+..+.|||||++||.+... | .|++-|+.+ +.. ....+.+ . -..++|++|++.|+.+..+.. ..
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~t--g~~-l~~~i~~-~--~~~~~w~~D~~~~~y~~~~~~~~~~~~ 200 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLET--GNW-YPELLDN-V--EPSFVWANDSWTFYYVRKHPVTLLPYQ 200 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCC--CCC-CCccccC-c--ceEEEEeeCCCEEEEEEecCCCCCCCE
Confidence 357778999999988876422 2 477778762 210 0111221 1 146999999998877765321 37
Q ss_pred EEEEECCCc--eEEEEecCCCCCCeE-EEEEecCCCEEEEEecC---CeEEEEEc---CCCeeeeee-ceeEEEEEEcCC
Q psy10566 373 LWVWNIETE--LLRVKLNHSPEDSLT-SCSWNRDGTKFVCGGIR---GQFYQCDI---EGQVLDSWE-GVRVNCLWCRSD 442 (604)
Q Consensus 373 i~vwd~~~~--~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d---g~i~iwd~---~~~~~~~~~-~~~v~~l~~s~~ 442 (604)
|+.+++.++ +-...+.. ...... .+..+.++++++..+.. +.+.+++. .+....... ...+..-... .
T Consensus 201 v~~h~lgt~~~~d~lv~~e-~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 278 (686)
T PRK10115 201 VWRHTIGTPASQDELVYEE-KDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDH-Y 278 (686)
T ss_pred EEEEECCCChhHCeEEEee-CCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEe-C
Confidence 999999888 32222321 122233 33334488877665443 46888885 233211111 1111111112 2
Q ss_pred CCEEEEEeCC----CeEEEEEcCC-CcccccccC--CCCeeEEEECCCCCEEEEEecCCe--EEEEecCCCceeeEee-c
Q psy10566 443 GKSVLAADTH----HRIRTYNFEH-LTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQG--VHLWDLRDRILLRKFQ-G 512 (604)
Q Consensus 443 g~~l~~~~~d----g~I~i~d~~~-~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~--I~lwd~~~~~~~~~~~-~ 512 (604)
+..+...+.. ..|...++.. .....++.+ ...+..+.+. .+.++++...++. ++++|..++ .+..+. .
T Consensus 279 ~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~-~~~~l~~~ 356 (686)
T PRK10115 279 QHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTR-EVIGIAFD 356 (686)
T ss_pred CCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCC-ceEEecCC
Confidence 2333333332 2344445442 222334444 2367777776 3345555555665 444554433 333332 1
Q ss_pred cccceEEEEeeeCCCC-CcEEEEEeC---CCcEEEEeCCCCc
Q psy10566 513 VTQGQFTIHSCFGGAN-QDFVASGSE---DGKVYIWHVKREL 550 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~-~~~l~sgs~---dg~I~iwd~~~~~ 550 (604)
..... ........++ +.++++.+. -+.++.+|..+++
T Consensus 357 ~~~~~-~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 357 DPAYV-TWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred CCceE-eeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 11111 1111111133 335544443 3679999988765
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.043 Score=59.19 Aligned_cols=182 Identities=16% Similarity=0.210 Sum_probs=102.8
Q ss_pred CcEEEEEEcCCCCeEEEEE------CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-------
Q psy10566 302 DEVWFCKFSPDGLKLATGS------KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE------- 368 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs------~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d------- 368 (604)
..+...++||||+.+|..- .|..-.||-...+. .... ...+. ..+.-.|+|||..+.+....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~~~--lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~ 424 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-VAVQ--VLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVI 424 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-ccee--eecCC--CCCCceECCCCCceEEEecCcceEEEe
Confidence 4678899999999887665 24444555443111 1121 22332 37788999998887776532
Q ss_pred ---CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc----CCC-eee---ee-ec--eeE
Q psy10566 369 ---DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI----EGQ-VLD---SW-EG--VRV 434 (604)
Q Consensus 369 ---~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~----~~~-~~~---~~-~~--~~v 434 (604)
+.+.+++.++..+.... .....|..+.|+|||..++... +|.|++--+ .|. .+. .+ .+ ..+
T Consensus 425 ~~~~~gql~~~~vd~ge~~~----~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~ 499 (591)
T PRK13616 425 RDPATGQLARTPVDASAVAS----RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTA 499 (591)
T ss_pred ccCCCceEEEEeccCchhhh----ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence 22244444555444322 2245699999999999988766 477777333 232 110 01 11 135
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEE--cCCCccccccc--CCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 435 NCLWCRSDGKSVLAADTHHRIRTYN--FEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~dg~I~i~d--~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
..+.|..++..+ ++..++.-.+|. +.......... ...++..++-+++ .+++...++.+
T Consensus 500 ~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~ 562 (591)
T PRK13616 500 VSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARAVL 562 (591)
T ss_pred ccceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCceE
Confidence 778899998855 544444444444 44322221111 1455666666652 45566666633
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.058 Score=58.25 Aligned_cols=149 Identities=18% Similarity=0.179 Sum_probs=90.7
Q ss_pred CCCCeeEEEECCCCCeEEEEe------CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC------
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVG------PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR------ 413 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~------~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------ 413 (604)
....+.+.+++|+|+.++... .+....+++++..... ..+..+ ...+.-.|+|+|..+++....
T Consensus 348 ~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~--~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v 423 (591)
T PRK13616 348 QMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA--VQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRV 423 (591)
T ss_pred cccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc--eeeecC--CCCCCceECCCCCceEEEecCcceEEE
Confidence 334678999999999988776 2433478888863332 222222 237788999998877776532
Q ss_pred ------CeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEE---EEcCCCccccc-----c-c-CCCCeeE
Q psy10566 414 ------GQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRT---YNFEHLTDSNL-----L-Q-EDHPVMS 477 (604)
Q Consensus 414 ------g~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i---~d~~~~~~~~~-----~-~-~~~~i~~ 477 (604)
+.+.+.++++..........|..+.++|||..++... ++.|++ -....+. ..+ + . ....+.+
T Consensus 424 ~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~ 501 (591)
T PRK13616 424 IRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVS 501 (591)
T ss_pred eccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-eeecccEEeecccCCcccc
Confidence 2343334443222221134699999999999988876 477777 3333332 111 1 1 1234688
Q ss_pred EEECCCCCEEEEEecCCeEEEEec
Q psy10566 478 FTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 478 ~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
+.|..++.++ ++..++...+|.+
T Consensus 502 l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 502 LDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred ceEecCCEEE-EEecCCCCceEEE
Confidence 9999998855 5555554444443
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0014 Score=63.69 Aligned_cols=99 Identities=10% Similarity=0.072 Sum_probs=75.7
Q ss_pred EEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 496 VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 496 I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
+++.+..+.+....+.++.. .|+.++++|..+ ++..++.+.+|+|.|+++...+..+..| ..+++++|.-++..+
T Consensus 175 v~~l~~~~fkssq~lp~~g~---~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~ 250 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGS---FIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHV 250 (463)
T ss_pred eEEeccCCcchhhcccccch---hhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcce
Confidence 44454444444443333333 456666777766 7889999999999999999999998888 789999999997788
Q ss_pred EEEEeCCCcEEEECCCCCCCCCcc
Q psy10566 575 IASVSDDCTVRIWGPHLNTNKSPH 598 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~~~~~~~ 598 (604)
|..|-..|.|.|||++..+.....
T Consensus 251 IYaGl~nG~VlvyD~R~~~~~~~e 274 (463)
T KOG1645|consen 251 IYAGLQNGMVLVYDMRQPEGPLME 274 (463)
T ss_pred eEEeccCceEEEEEccCCCchHhh
Confidence 888989999999999987754433
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.014 Score=59.00 Aligned_cols=140 Identities=11% Similarity=0.122 Sum_probs=92.8
Q ss_pred EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCE-------EEEEecCCeEEEEecCCCce--eeEeeccccc-
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRL-------ALLNVSTQGVHLWDLRDRIL--LRKFQGVTQG- 516 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~-------l~~~~~dg~I~lwd~~~~~~--~~~~~~~~~~- 516 (604)
..+.....++-.|++.++..........|+-+.+.|+.+. -++|-.++.|.-||.+-... +...+++.-.
T Consensus 350 ~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~ 429 (644)
T KOG2395|consen 350 MDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYST 429 (644)
T ss_pred eCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccccc
Confidence 3445556788889988888777766666888888886543 46777889999999884322 2222232211
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
.+...|... ....+||+||.+|.|++||.-.-..-..+++-..+|..|..+.+|..+|+|| +..+.+-++
T Consensus 430 k~nFsc~aT-T~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~t 499 (644)
T KOG2395|consen 430 KNNFSCFAT-TESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC--KTYLLLIDT 499 (644)
T ss_pred ccccceeee-cCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec--ccEEEEEEE
Confidence 112232222 4445899999999999999843334456778889999999999955555555 455555544
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.18 Score=47.84 Aligned_cols=158 Identities=14% Similarity=0.140 Sum_probs=106.0
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE 422 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 422 (604)
+.+-...|.++.|+|+.+.|++..... .-.+|=...|..+..+.-..-.....+.+..++.+.++--.++.+.++.++
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p--~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd 158 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKP--AAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVD 158 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCC--ceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence 445555699999999999999998887 455665667888888775444556778888888888888888888888774
Q ss_pred C--Ceeee----ee-------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc----cC-------CCCeeEE
Q psy10566 423 G--QVLDS----WE-------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL----QE-------DHPVMSF 478 (604)
Q Consensus 423 ~--~~~~~----~~-------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~----~~-------~~~i~~~ 478 (604)
. ..+.. +. +.....+++.|....++.+-...-+.||.+......-.. .+ -..+.++
T Consensus 159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl 238 (316)
T COG3204 159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGL 238 (316)
T ss_pred CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccc
Confidence 2 21111 10 124678999999999999988888888877643311110 00 1245667
Q ss_pred EECCCC-CEEEEEecCCeEEEEecC
Q psy10566 479 TIDATD-RLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 479 ~~s~~~-~~l~~~~~dg~I~lwd~~ 502 (604)
.|++.. ..++.+..++.+.-.|..
T Consensus 239 ~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 239 EFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred eecCCCCcEEEEecCCceEEEEecC
Confidence 777644 445555556666666654
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.05 Score=58.81 Aligned_cols=181 Identities=11% Similarity=0.084 Sum_probs=98.8
Q ss_pred CCCEEEEEecC------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCccccc
Q psy10566 403 DGTKFVCGGIR------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTHH-----RIRTYNFEHLTDSNL 468 (604)
Q Consensus 403 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~dg-----~I~i~d~~~~~~~~~ 468 (604)
++..+++||.+ ..+..||............ +.......-+|+..+.|+.++ .+..||..+..-...
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~ 382 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKML 382 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEEC
Confidence 66777777753 2467788765543333221 222233344677777777653 488899876532221
Q ss_pred ccCC---CCeeEEEECCCCCEEEEEecC-----------------------CeEEEEecCCCcee--eEeeccccceEEE
Q psy10566 469 LQED---HPVMSFTIDATDRLALLNVST-----------------------QGVHLWDLRDRILL--RKFQGVTQGQFTI 520 (604)
Q Consensus 469 ~~~~---~~i~~~~~s~~~~~l~~~~~d-----------------------g~I~lwd~~~~~~~--~~~~~~~~~~~~i 520 (604)
.... .....++ -+++..++|+.+ ..+..||..+.+-. ..+..... ..
T Consensus 383 ~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~---~~ 457 (557)
T PHA02713 383 PDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTI---RP 457 (557)
T ss_pred CCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccc---cC
Confidence 1111 1111222 256777777654 24777887765322 11111111 11
Q ss_pred EeeeCCCCCcEEEEEeCC------CcEEEEeCCC---CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCC--cEEEECC
Q psy10566 521 HSCFGGANQDFVASGSED------GKVYIWHVKR---ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC--TVRIWGP 589 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~d------g~I~iwd~~~---~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg--~I~iW~~ 589 (604)
..+ .-++++.+.|+.+ ..+..||..+ ...+..+.........+.+. +.+.+.||.|| ++-.||+
T Consensus 458 ~~~--~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~---~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 458 GVV--SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHD---NTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred cEE--EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEEC---CEEEEEeeecceeehhhcCc
Confidence 111 1356777777654 2467899876 33344444433344444443 78999999998 7888888
Q ss_pred CCCC
Q psy10566 590 HLNT 593 (604)
Q Consensus 590 ~~~~ 593 (604)
.+.+
T Consensus 533 ~~~~ 536 (557)
T PHA02713 533 YTYE 536 (557)
T ss_pred cccc
Confidence 8765
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.08 Score=57.23 Aligned_cols=225 Identities=10% Similarity=0.086 Sum_probs=112.2
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-C---ceEEEEEECCCceEEEEecCCCCCCeEEEE
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-D---CHELWVWNIETELLRVKLNHSPEDSLTSCS 399 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-~---~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 399 (604)
.+..||.. +..+..+..+...... .+++. -++..++.||.+ + ...+..||..++.....-. -....-....
T Consensus 273 ~v~~yd~~--~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~-m~~~R~~~~~ 347 (557)
T PHA02713 273 CILVYNIN--TMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPP-MIKNRCRFSL 347 (557)
T ss_pred CEEEEeCC--CCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCC-CcchhhceeE
Confidence 46667766 3344433333322111 12222 356666777653 1 1268899988875432211 1111111122
Q ss_pred EecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCC-------------------
Q psy10566 400 WNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTH------------------- 452 (604)
Q Consensus 400 ~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~d------------------- 452 (604)
..-+|+..+.||.++ .+..||............ +....+..-+|+..+.|+.+
T Consensus 348 ~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 348 AVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred EEECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccccc
Confidence 233778888888764 477888865444332221 11111223367777777654
Q ss_pred ----CeEEEEEcCCCcccccccC-CCCeeEEEECCCCCEEEEEecC------CeEEEEecCC-Cc--eeeEeeccccceE
Q psy10566 453 ----HRIRTYNFEHLTDSNLLQE-DHPVMSFTIDATDRLALLNVST------QGVHLWDLRD-RI--LLRKFQGVTQGQF 518 (604)
Q Consensus 453 ----g~I~i~d~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~d------g~I~lwd~~~-~~--~~~~~~~~~~~~~ 518 (604)
..+..||..+..-...... ......-...-+++..++|+.+ ..+..||..+ .+ .+..+.... .
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r---~ 504 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL---S 504 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc---c
Confidence 2477788776532221111 0111111122356666666653 2467899886 32 222222211 1
Q ss_pred EEEeeeCCCCCcEEEEEeCCC--cEEEEeCCCCcceEEeeCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDG--KVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg--~I~iwd~~~~~~~~~l~~h 558 (604)
....+. -+|++.++|+.|| .+..||..+.+=...-..|
T Consensus 505 ~~~~~~--~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~ 544 (557)
T PHA02713 505 ALHTIL--HDNTIMMLHCYESYMLQDTFNVYTYEWNHICHQH 544 (557)
T ss_pred cceeEE--ECCEEEEEeeecceeehhhcCcccccccchhhhc
Confidence 222222 4788889999888 6777887765543333334
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.45 Score=44.90 Aligned_cols=230 Identities=15% Similarity=0.148 Sum_probs=128.1
Q ss_pred EEEEEcCCCC-eEEEEECCCe-EEEEEeCCCCceeEeeEEeccCCCC--eeEEEECCCCCeEEEEeCCC---ceEEEEEE
Q psy10566 305 WFCKFSPDGL-KLATGSKDTT-VIIWDVDPVTFTCQHRKTLEGHTLG--VAYLAWSPDSSHLLVVGPED---CHELWVWN 377 (604)
Q Consensus 305 ~~v~fspdg~-~lasgs~dg~-i~iwd~~~~~~~~~~~~~l~~h~~~--V~~l~~spd~~~l~s~~~d~---~~~i~vwd 377 (604)
..|+|+|.-. -++.+-.-|+ ..++|.+. .....++...++. --.-.|||||.+|.+.-.|- -+.|-+||
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~----~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd 146 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNG----AQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYD 146 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCC----CcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEe
Confidence 3477888644 5566655565 56788762 2222222211110 11235999999998865542 24799999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC------------------CeEEEEE-cCCCeeeeee------ce
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR------------------GQFYQCD-IEGQVLDSWE------GV 432 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------------------g~i~iwd-~~~~~~~~~~------~~ 432 (604)
...+-...-....|.-....+.|.+||+.++.+... -++.+.| .+|+.+.+.. ..
T Consensus 147 ~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~l 226 (366)
T COG3490 147 AREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQL 226 (366)
T ss_pred cccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhc
Confidence 986543322223455567889999999999886531 1223333 2344443322 22
Q ss_pred eEEEEEEcCCCCEEEEEeCCCe-----EEEEEcCCCccccccc--------CCCCeeEEEECCCCCEEEEEecC-CeEEE
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHR-----IRTYNFEHLTDSNLLQ--------EDHPVMSFTIDATDRLALLNVST-QGVHL 498 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~-----I~i~d~~~~~~~~~~~--------~~~~i~~~~~s~~~~~l~~~~~d-g~I~l 498 (604)
.+..+...+||..++.+-..|. --+=-...++....+. ....|-+++.+.+..+++..+-. +...+
T Consensus 227 SiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi 306 (366)
T COG3490 227 SIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVI 306 (366)
T ss_pred ceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEE
Confidence 5888888888886655433221 1111111122222221 24567788888777776666554 56789
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
||..+|..+..-.-.... .+ .+...-++..+.+|.+.++.
T Consensus 307 ~da~tG~vv~~a~l~daa--Gv-----a~~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 307 WDAATGAVVSEAALPDAA--GV-----AAAKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred EEcCCCcEEecccccccc--cc-----eeccCceEEecCCceEEecc
Confidence 999999877544322111 11 12233355566788888774
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.66 Score=48.09 Aligned_cols=175 Identities=12% Similarity=0.045 Sum_probs=87.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeE---eeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQ---HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~---~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
+.|.++.|+.+.. |+.-..||+++++|+.... ... ......-....+....+..+| ++.-..++ .+.+.+-
T Consensus 81 ~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~G--ivvLt~~~--~~~~v~n 154 (410)
T PF04841_consen 81 GRIVGMGWTDDEE-LVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKNG--IVVLTGNN--RFYVVNN 154 (410)
T ss_pred CCEEEEEECCCCe-EEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCCC--EEEECCCC--eEEEEeC
Confidence 7899999988655 4556689999999985111 000 011111111222233344455 33333343 3444332
Q ss_pred CCce-EEEEecCCCC--------CCeEE-EEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-ceeEEEEEEcCCCCEEE
Q psy10566 379 ETEL-LRVKLNHSPE--------DSLTS-CSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-GVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 379 ~~~~-~~~~~~~~~~--------~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~v~~l~~s~~g~~l~ 447 (604)
.... .......... ..... ..++.+....+....++.+.+.+-..- .... ..++..+++||+|+.++
T Consensus 155 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~--~~i~~~~~i~~iavSpng~~iA 232 (410)
T PF04841_consen 155 IDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSF--KQIDSDGPIIKIAVSPNGKFIA 232 (410)
T ss_pred ccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccc--ccccCCCCeEEEEECCCCCEEE
Confidence 2211 1111110000 00111 234445555555555555554433211 0111 24789999999999999
Q ss_pred EEeCCCeEEEEEcCCCcccccccC--CCCeeEEEECCCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATD 484 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~ 484 (604)
.-..+|.+.+.+..-.+....+.. ......+.|.-++
T Consensus 233 l~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 233 LFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred EEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 999999998887544433322222 3455666676554
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=1 Score=48.79 Aligned_cols=188 Identities=12% Similarity=0.081 Sum_probs=91.2
Q ss_pred CCCCeEEEEECCC------eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---eEEEEEECCCc
Q psy10566 311 PDGLKLATGSKDT------TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC---HELWVWNIETE 381 (604)
Q Consensus 311 pdg~~lasgs~dg------~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~~ 381 (604)
.++..++.||.++ .+..||.. +.++.....+.........+. -++..++.||.++. ..+..||..++
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~--~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~ 368 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTK--TKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGES 368 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCC--CCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCC
Confidence 4556677776543 35666665 444443333322222222222 25667777776531 25888998877
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecC------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCC
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~d 452 (604)
.....-.......-.++ ..-+++.++.||.+ ..+..||............ +....+...++...+.|+.+
T Consensus 369 ~W~~~~~lp~~r~~~~~-~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 447 (534)
T PHA03098 369 KWREEPPLIFPRYNPCV-VNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGIS 447 (534)
T ss_pred ceeeCCCcCcCCccceE-EEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCcc
Confidence 64432211111111122 22366777777732 3578888865443332221 11112233456666666542
Q ss_pred --------CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCC
Q psy10566 453 --------HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDR 504 (604)
Q Consensus 453 --------g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~ 504 (604)
..+.+||..+.+-..... ......+++. .+++.++.|+.+ +.+.+||..+.
T Consensus 448 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 448 YIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI-FNNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred CCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE-ECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 238888887654322211 1111111111 256666666543 35777776654
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.87 Score=47.49 Aligned_cols=123 Identities=20% Similarity=0.269 Sum_probs=76.7
Q ss_pred CCCcEEEEEEcCCC-----CeEEEEECCCeEEEEEeCCCC---ceeEeeEEecc-CCCC--eeEEEECCCCCeEEEEeCC
Q psy10566 300 HCDEVWFCKFSPDG-----LKLATGSKDTTVIIWDVDPVT---FTCQHRKTLEG-HTLG--VAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 300 H~~~V~~v~fspdg-----~~lasgs~dg~i~iwd~~~~~---~~~~~~~~l~~-h~~~--V~~l~~spd~~~l~s~~~d 368 (604)
.-..|..+.|.|-+ .+||. .....|.||.+.... .+....++..- ..-+ -..+.|+|....|++-...
T Consensus 55 qFEhV~GlsW~P~~~~~~paLLAV-QHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~ 133 (671)
T PF15390_consen 55 QFEHVHGLSWAPPCTADTPALLAV-QHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR 133 (671)
T ss_pred ccceeeeeeecCcccCCCCceEEE-eccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC
Confidence 33569999999953 25554 567789999987321 11111111110 1112 2367899999998887777
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-CeEEEEEcCCCe
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-GQFYQCDIEGQV 425 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~ 425 (604)
+ .-.++++.......+......+.|.|.+|.+||+.++++-.. =.-++||-..+.
T Consensus 134 d--vSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qKt 189 (671)
T PF15390_consen 134 D--VSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQKT 189 (671)
T ss_pred c--eeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchhh
Confidence 6 334555554444444433466889999999999988876544 356788875443
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=1.5 Score=48.84 Aligned_cols=240 Identities=13% Similarity=0.044 Sum_probs=119.5
Q ss_pred CCeeEEEECCCCCeEEEEeCCC---ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC------CeEEE
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPED---CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR------GQFYQ 418 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------g~i~i 418 (604)
-.+..+.|+||+++|+.+...+ ...|++.|+.+|..+..... ..-..++|.+|++.|+....+ ..|+.
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~---~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLD---NVEPSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcccc---CcceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 3467788999999888764432 12688999988863322221 112469999999877766543 35777
Q ss_pred EEcC-C--Ceeeeeec--e-eEEEEEEcCCCCEEEEEeCC---CeEEEEEcCC--CcccccccCCCCeeEEEECCCCCEE
Q psy10566 419 CDIE-G--QVLDSWEG--V-RVNCLWCRSDGKSVLAADTH---HRIRTYNFEH--LTDSNLLQEDHPVMSFTIDATDRLA 487 (604)
Q Consensus 419 wd~~-~--~~~~~~~~--~-~v~~l~~s~~g~~l~~~~~d---g~I~i~d~~~--~~~~~~~~~~~~i~~~~~s~~~~~l 487 (604)
+++. + +....+.. . .......+.++++++..+.. +.+.+++... ............+..-..+.. ..+
T Consensus 204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l 282 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQ-HRF 282 (686)
T ss_pred EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCC-CEE
Confidence 7773 2 22222222 1 12244456588876655443 4688888533 222222222222222222323 333
Q ss_pred EEEecC----CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-CcceEEee-CCCCC
Q psy10566 488 LLNVST----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLS-GHTRT 561 (604)
Q Consensus 488 ~~~~~d----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~-~h~~~ 561 (604)
++.+.. ..|...++.+......+..+... ..+..+.+. .+.++++...+|.-+++-+.. +..+..+. .....
T Consensus 283 y~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~-~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~ 360 (686)
T PRK10115 283 YLRSNRHGKNFGLYRTRVRDEQQWEELIPPREN-IMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAY 360 (686)
T ss_pred EEEEcCCCCCceEEEecCCCcccCeEEECCCCC-CEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCCceEEecCCCCce
Confidence 333332 23444455422222333333221 122222222 445667777777655554332 23344443 22223
Q ss_pred eeEEEEc--CCCCcEEEEEeC---CCcEEEECCCCCC
Q psy10566 562 VSCVAWN--PVYHQMIASVSD---DCTVRIWGPHLNT 593 (604)
Q Consensus 562 V~~v~~s--p~~~~~l~s~s~---Dg~I~iW~~~~~~ 593 (604)
+..+.++ ++++.++++.+. -+.+..+|+.+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 361 VTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred EeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 3334444 443345555443 2667777776653
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.83 Score=45.87 Aligned_cols=236 Identities=16% Similarity=0.156 Sum_probs=113.2
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe----ccCCCCeeEEEECCC----CCeEEEEeCC------
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL----EGHTLGVAYLAWSPD----SSHLLVVGPE------ 368 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l----~~h~~~V~~l~~spd----~~~l~s~~~d------ 368 (604)
..+.|+|.|||++|++ ...|.|++++.+ +. ....+..+ .........++++|+ +...++.+..
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~~~-g~-~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVDKD-GS-LKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEETT-TE-ECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEeCC-Cc-CcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 4678999999987765 569999999932 11 11223332 234567899999994 3333333321
Q ss_pred CceEEEEEECCCc-------eEEE-EecC--CCCCCeEEEEEecCCCEEEEEecC-------------CeEEEEEcCCCe
Q psy10566 369 DCHELWVWNIETE-------LLRV-KLNH--SPEDSLTSCSWNRDGTKFVCGGIR-------------GQFYQCDIEGQV 425 (604)
Q Consensus 369 ~~~~i~vwd~~~~-------~~~~-~~~~--~~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~ 425 (604)
....|.-|....+ +.+. .... ........+.|.|||.+.++.+.. |.|.-.+.+++.
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~ 159 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSI 159 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCcC
Confidence 1114555554433 1111 1121 123345679999999777766543 345555555542
Q ss_pred e-------------eee-ece-eEEEEEEcCC-CCEEEEEeC--CCeEEEEEcCCCc-----------------------
Q psy10566 426 L-------------DSW-EGV-RVNCLWCRSD-GKSVLAADT--HHRIRTYNFEHLT----------------------- 464 (604)
Q Consensus 426 ~-------------~~~-~~~-~v~~l~~s~~-g~~l~~~~~--dg~I~i~d~~~~~----------------------- 464 (604)
. ..+ .++ ....++|.|. |.. .++.. +..=.+.-+..+.
T Consensus 160 p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l-~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~ 238 (331)
T PF07995_consen 160 PADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRL-WAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPS 238 (331)
T ss_dssp -TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEE-EEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS
T ss_pred CCCCccccCCCceEEEEEeCCCccccEEEECCCCcE-EEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccC
Confidence 1 111 122 4778999998 554 44332 2211222221110
Q ss_pred ------ccccccCCCCeeEEEECC-------CCCEEEEEecCCeEEEEecCCCceeeEeecc-ccceEEEEeeeCCCCCc
Q psy10566 465 ------DSNLLQEDHPVMSFTIDA-------TDRLALLNVSTQGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGGANQD 530 (604)
Q Consensus 465 ------~~~~~~~~~~i~~~~~s~-------~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 530 (604)
....+.+...+..+.|.. .+.+++.....+.|....+..+..+...... ......+..+...|||.
T Consensus 239 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~ 318 (331)
T PF07995_consen 239 CPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGA 318 (331)
T ss_dssp -TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSE
T ss_pred CCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCe
Confidence 000111223445555543 3445666555677888777654332222111 11111233344457777
Q ss_pred EEEEEeCCCcEE
Q psy10566 531 FVASGSEDGKVY 542 (604)
Q Consensus 531 ~l~sgs~dg~I~ 542 (604)
+.++-+.+|.|+
T Consensus 319 Lyv~~d~~G~iy 330 (331)
T PF07995_consen 319 LYVSDDSDGKIY 330 (331)
T ss_dssp EEEEE-TTTTEE
T ss_pred EEEEECCCCeEe
Confidence 666666666664
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.34 Score=49.61 Aligned_cols=198 Identities=11% Similarity=0.072 Sum_probs=110.7
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcC-----C-C----e----------------eee------------e------
Q psy10566 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIE-----G-Q----V----------------LDS------------W------ 429 (604)
Q Consensus 394 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-----~-~----~----------------~~~------------~------ 429 (604)
.|+.+.|.++...|++|...|.|.+|... + + . +.. +
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 48889999999999999999998888651 1 0 0 000 0
Q ss_pred --eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc---c------CCCCeeEEEEC-----CCC---CEEEEE
Q psy10566 430 --EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL---Q------EDHPVMSFTID-----ATD---RLALLN 490 (604)
Q Consensus 430 --~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~---~------~~~~i~~~~~s-----~~~---~~l~~~ 490 (604)
...+|++++.+ |=.++++|..+|.+.+.|++........ . ....++++.|. .|+ -.+++|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 01247777776 5557899999999999999876433221 1 23456777765 233 468899
Q ss_pred ecCCeEEEEecC--C-CceeeEee----ccccceEEEEeeeCC-------------------CCCcEEEEEeCCCcEEEE
Q psy10566 491 VSTQGVHLWDLR--D-RILLRKFQ----GVTQGQFTIHSCFGG-------------------ANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 491 ~~dg~I~lwd~~--~-~~~~~~~~----~~~~~~~~i~~~~~~-------------------~~~~~l~sgs~dg~I~iw 544 (604)
+..|.+.+|.+. . +.....+. .+...+..|..+... .-..+++++ .+..++++
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvv-Se~~irv~ 240 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVV-SESDIRVF 240 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE--SSEEEEE
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEE-cccceEEE
Confidence 999999999874 1 22222222 222333333332110 001244443 46679999
Q ss_pred eCCCCcceEEeeCCCCCeeEEEEcC----CCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 545 HVKRELPIATLSGHTRTVSCVAWNP----VYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V~~v~~sp----~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...+.+.........-....+.+-+ ..+..|++-..||.|+++.+..-+
T Consensus 241 ~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lk 293 (395)
T PF08596_consen 241 KPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLK 293 (395)
T ss_dssp -TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--
T ss_pred eCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCch
Confidence 9988877665543322333444421 126788899999999999887643
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.14 Score=52.30 Aligned_cols=140 Identities=17% Similarity=0.232 Sum_probs=95.0
Q ss_pred CCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-------EEEEEecCCeEEEEEcC--CC-ee
Q psy10566 357 PDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-------KFVCGGIRGQFYQCDIE--GQ-VL 426 (604)
Q Consensus 357 pd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~s~~~dg~i~iwd~~--~~-~~ 426 (604)
.+.+.++..+... ..++-.|++.|+.+...... ..|.-+.+.|+.+ .-+.|-.+..|.-||++ ++ .+
T Consensus 343 ~dsnlil~~~~~~-~~l~klDIE~GKIVeEWk~~--~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl 419 (644)
T KOG2395|consen 343 ADSNLILMDGGEQ-DKLYKLDIERGKIVEEWKFE--DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKL 419 (644)
T ss_pred cccceEeeCCCCc-CcceeeecccceeeeEeecc--CCcceeeccCCcchhcccccccEEeecCCceEEecccccCccee
Confidence 3445555544433 26999999999998887743 3377788888653 23567778899999984 44 22
Q ss_pred eeeece------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 427 DSWEGV------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 427 ~~~~~~------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
....++ ...|.+-..+| ++++|+.+|.|++||--...... +...+.+|..+..+.+|+++++.|. ..+.+.
T Consensus 420 ~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi 497 (644)
T KOG2395|consen 420 AVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLI 497 (644)
T ss_pred eeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEE
Confidence 222222 35566655555 58999999999999974443333 3345789999999999999887654 556666
Q ss_pred ec
Q psy10566 500 DL 501 (604)
Q Consensus 500 d~ 501 (604)
++
T Consensus 498 ~t 499 (644)
T KOG2395|consen 498 DT 499 (644)
T ss_pred EE
Confidence 65
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.091 Score=57.94 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=66.4
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--e--
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--R-- 433 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~-- 433 (604)
+..++.|+..| .+-..|..+.-..........++|++++|+.+|+.++.|-.+|.|.+||+. ++.++.+..+ +
T Consensus 99 ~~~ivi~Ts~g--hvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t 176 (1206)
T KOG2079|consen 99 VVPIVIGTSHG--HVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVT 176 (1206)
T ss_pred eeeEEEEcCch--hhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccc
Confidence 34566666655 677777765422122223456789999999999999999999999999995 5776666543 3
Q ss_pred -EEEEEEcCCCCEEEEEeCCCeE
Q psy10566 434 -VNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 434 -v~~l~~s~~g~~l~~~~~dg~I 455 (604)
+..+.+..++..+++++..|.+
T Consensus 177 ~vi~v~~t~~nS~llt~D~~Gsf 199 (1206)
T KOG2079|consen 177 GVIFVGRTSQNSKLLTSDTGGSF 199 (1206)
T ss_pred eEEEEEEeCCCcEEEEccCCCce
Confidence 4444455566678888888863
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0089 Score=61.74 Aligned_cols=76 Identities=18% Similarity=0.261 Sum_probs=65.8
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee-EEEEcCCCCcEEEEEeCCCcEEEECCCCCCCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS-CVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKS 596 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~-~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~~ 596 (604)
.+..+.|+|.-.+||.+..+|.|.+...+ .+.+.++.-|...++ +++|.|| +++||.|-.||+|++-|+.++..-.
T Consensus 22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~D-GkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPD-GKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCC-CCEEEEEecCCeEEEEEccCCCcee
Confidence 34445667999999999999999999988 788899987877777 9999999 8999999999999999999886433
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=64.63 Aligned_cols=101 Identities=12% Similarity=0.206 Sum_probs=72.3
Q ss_pred CEEEEEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
..++.|++.|.+-..|....-. ..-....++|++++|+.+|..++.|-.+|.|.+||+..+++.+.+..+..+...+-
T Consensus 100 ~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi 179 (1206)
T KOG2079|consen 100 VPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVI 179 (1206)
T ss_pred eeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEE
Confidence 3466666666676666655322 11222468999999999999999999999999999999999998887766655554
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
..-+..++..+.++...|. +|..
T Consensus 180 ~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 180 FVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EEEEeCCCcEEEEccCCCc--eEEE
Confidence 4444355557888877776 4543
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.42 E-value=1.1 Score=44.03 Aligned_cols=272 Identities=13% Similarity=0.085 Sum_probs=127.6
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC--CCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH--TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h--~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
..+.+|.|..+..-+|+|. .+. |+...++..+.+....-... .....+|.|..+ . ...++..+ +.+...+
T Consensus 17 ~~l~dV~F~d~~~G~~VG~-~g~--il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~-g~ivG~~g---~ll~T~D 88 (302)
T PF14870_consen 17 KPLLDVAFVDPNHGWAVGA-YGT--ILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-E-GWIVGEPG---LLLHTTD 88 (302)
T ss_dssp S-EEEEEESSSS-EEEEET-TTE--EEEESSTTSS-EE-----S-----EEEEEEEETT-E-EEEEEETT---EEEEESS
T ss_pred CceEEEEEecCCEEEEEec-CCE--EEEECCCCccccccccCCCccceeeEEEEEecCC-c-eEEEcCCc---eEEEecC
Confidence 4788999996666666664 554 45665555555543321111 123567777543 3 34455565 4444445
Q ss_pred CceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCCCe
Q psy10566 380 TELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTHHR 454 (604)
Q Consensus 380 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~dg~ 454 (604)
.|+.-..+. .........+....++ ....++..|.|+.-.=.|+.-+.... ..+..+..+++|.+++++.....
T Consensus 89 gG~tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~ 167 (302)
T PF14870_consen 89 GGKTWERVPLSSKLPGSPFGITALGDG-SAELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNF 167 (302)
T ss_dssp TTSS-EE----TT-SS-EEEEEEEETT-EEEEEETT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSE
T ss_pred CCCCcEEeecCCCCCCCeeEEEEcCCC-cEEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccE
Confidence 554333322 1122333444444444 33334455554443333444333222 25777888999998888877766
Q ss_pred EEEEEcCCCc-ccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEe-cCCCceeeE-eeccccceEEEEeeeCCCCCcE
Q psy10566 455 IRTYNFEHLT-DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWD-LRDRILLRK-FQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 455 I~i~d~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd-~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
..-||-.... ..........|.++.|.|++...+++ ..|.|+.=+ ....+.... +.......+.+..+.+.+++..
T Consensus 168 ~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~ 246 (302)
T PF14870_consen 168 YSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEI 246 (302)
T ss_dssp EEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-E
T ss_pred EEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCE
Confidence 7778755321 12222346789999999998776655 888888876 222222111 1111112222333445566666
Q ss_pred EEEEeCCCcEEEEeCCCCcceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 532 VASGSEDGKVYIWHVKRELPIATLSG---HTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
.++| ..|.+ +.....|+--..-.. -....+.|.|.+. ..-+ ..+.+|.|.-|
T Consensus 247 wa~g-g~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~-~~gf-~lG~~G~ll~~ 301 (302)
T PF14870_consen 247 WAVG-GSGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNP-DKGF-VLGQDGVLLRY 301 (302)
T ss_dssp EEEE-STT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEET-TEEE-EE-STTEEEEE
T ss_pred EEEe-CCccE-EEeCCCCccceECccccCCCCceEEEEEcCC-CceE-EECCCcEEEEe
Confidence 6655 45544 345566665554432 2456788888754 3444 45678877655
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=96.36 E-value=1.4 Score=45.21 Aligned_cols=76 Identities=11% Similarity=0.114 Sum_probs=51.5
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC-eeEEEE-cCC----------------CCcEEEEEeCC
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT-VSCVAW-NPV----------------YHQMIASVSDD 581 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~-V~~v~~-sp~----------------~~~~l~s~s~D 581 (604)
+..+..+|++++.|+...=|+|.++|+.++..+..++|-.+. +.-+.. .+. .-.+++-+-.-
T Consensus 310 ~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprR 389 (415)
T PF14655_consen 310 GESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRR 389 (415)
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccC
Confidence 334555799998888877799999999999988888876442 111111 110 01244556678
Q ss_pred CcEEEECCCCCCCC
Q psy10566 582 CTVRIWGPHLNTNK 595 (604)
Q Consensus 582 g~I~iW~~~~~~~~ 595 (604)
|.|-||.+..+..-
T Consensus 390 g~lEvW~~~~g~Rv 403 (415)
T PF14655_consen 390 GILEVWSMRQGPRV 403 (415)
T ss_pred CeEEEEecCCCCEE
Confidence 99999999988743
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=96.28 E-value=1.3 Score=44.99 Aligned_cols=191 Identities=12% Similarity=0.146 Sum_probs=96.1
Q ss_pred CCCEEEEEe-cCCeEEEEEcC-----CCeeeeeec---------eeEEEEEEcCCCCEEEEEeC------CCeEEEEEcC
Q psy10566 403 DGTKFVCGG-IRGQFYQCDIE-----GQVLDSWEG---------VRVNCLWCRSDGKSVLAADT------HHRIRTYNFE 461 (604)
Q Consensus 403 ~~~~l~s~~-~dg~i~iwd~~-----~~~~~~~~~---------~~v~~l~~s~~g~~l~~~~~------dg~I~i~d~~ 461 (604)
+.++|+..+ ..+.|+++|+. -+..+.++. .....+.+-|+|+.++++-. .|.+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 456777776 66799999984 233344332 13445667789988887532 2568888877
Q ss_pred CCcccccccC----CCCeeEEEECCCCCEEEEEec--------------------CCeEEEEecCCCceeeEeeccccc-
Q psy10566 462 HLTDSNLLQE----DHPVMSFTIDATDRLALLNVS--------------------TQGVHLWDLRDRILLRKFQGVTQG- 516 (604)
Q Consensus 462 ~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~--------------------dg~I~lwd~~~~~~~~~~~~~~~~- 516 (604)
+......... ..--..+-+.|..+.++++.- ..++.+||+.+.+.++++.-....
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 6554443332 223456777888888877632 356999999999999998855433
Q ss_pred -eEEEEeeeCCCCCcEEEEEe-CCCcEEEEeC-CCCc----ceEEeeCC-----------------CCCeeEEEEcCCCC
Q psy10566 517 -QFTIHSCFGGANQDFVASGS-EDGKVYIWHV-KREL----PIATLSGH-----------------TRTVSCVAWNPVYH 572 (604)
Q Consensus 517 -~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd~-~~~~----~~~~l~~h-----------------~~~V~~v~~sp~~~ 572 (604)
...++++. .|+..+=++|+ -.++|..|-. ..++ .+..+..- ..-|+.+..|.|+.
T Consensus 246 ~pLEvRflH-~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDr 324 (461)
T PF05694_consen 246 MPLEVRFLH-DPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDR 324 (461)
T ss_dssp EEEEEEE-S-STT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-
T ss_pred ceEEEEecC-CCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCC
Confidence 34566544 35555444443 3555655544 3332 12222111 24579999999966
Q ss_pred cEEEEEeCCCcEEEECCCCCCC
Q psy10566 573 QMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
.+.+++=.+|.||.||+....+
T Consensus 325 fLYvs~W~~GdvrqYDISDP~~ 346 (461)
T PF05694_consen 325 FLYVSNWLHGDVRQYDISDPFN 346 (461)
T ss_dssp EEEEEETTTTEEEEEE-SSTTS
T ss_pred EEEEEcccCCcEEEEecCCCCC
Confidence 6667777899999999987654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.79 Score=43.64 Aligned_cols=161 Identities=10% Similarity=0.144 Sum_probs=99.8
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
+.|-+..|.++.|+|+.+.|++......-.||=.. .+..+.++.-. -.....|.|..++.+.++--.+. .+.+
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~----~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~--~l~~ 154 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTK----EGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDR--ALYL 154 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEec----CCceEEEecccccCChhHeEEecCCEEEEEehhcc--eEEE
Confidence 44555669999999999988877767766676554 44444444321 23345678888887777766666 6777
Q ss_pred EECCCceEEEE-------ec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe--e--e---------eeecee
Q psy10566 376 WNIETELLRVK-------LN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV--L--D---------SWEGVR 433 (604)
Q Consensus 376 wd~~~~~~~~~-------~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~--~---------~~~~~~ 433 (604)
+.+........ +. ...+.....++|.|....|+.+-...-+.+|.+++.. + . .+.-..
T Consensus 155 ~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~D 234 (316)
T COG3204 155 FTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLD 234 (316)
T ss_pred EEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeec
Confidence 76654421111 11 1125567899999999999999888877777664211 1 0 111124
Q ss_pred EEEEEEcCC-CCEEEEEeCCCeEEEEEcCCC
Q psy10566 434 VNCLWCRSD-GKSVLAADTHHRIRTYNFEHL 463 (604)
Q Consensus 434 v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~ 463 (604)
+.++.|.+. +..++.+..++.+.-.|....
T Consensus 235 vSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 235 VSGLEFNAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred cccceecCCCCcEEEEecCCceEEEEecCCC
Confidence 666777764 445555555666666665543
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0051 Score=55.66 Aligned_cols=139 Identities=7% Similarity=0.067 Sum_probs=75.0
Q ss_pred EEEEecCCeEEEEEcCCCeeeeeeceeEEE-EEEcCCCCEEEEEeCCCeEEEEEcCCCcc---cccccCCCCeeEEEECC
Q psy10566 407 FVCGGIRGQFYQCDIEGQVLDSWEGVRVNC-LWCRSDGKSVLAADTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDA 482 (604)
Q Consensus 407 l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~-l~~s~~g~~l~~~~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~ 482 (604)
+...+.+|.|.-+++....+..-....+.+ .....-+..+++|+.+|.|.+|....... ........-...+....
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~ 112 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGR 112 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceecccccc
Confidence 344456666666665322211111111111 12233456799999999999998873211 11111122223333444
Q ss_pred CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE--eCCCcEEEEeCC
Q psy10566 483 TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG--SEDGKVYIWHVK 547 (604)
Q Consensus 483 ~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg--s~dg~I~iwd~~ 547 (604)
++.+..+++.+|.|+.|++.-++.+-....|......- ......+.+++.. |.|..++.|++.
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~--~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEE--LIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccCCCcce--eEEecCCceEEeeccccchhhhhcchh
Confidence 56688999999999999998887766555554211111 1111334555555 666666666665
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=96.16 E-value=2.9 Score=46.41 Aligned_cols=283 Identities=12% Similarity=0.131 Sum_probs=140.8
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CC----eEEEEeCCCceEEEEE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SS----HLLVVGPEDCHELWVW 376 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~----~l~s~~~d~~~~i~vw 376 (604)
.++..+.+.+...++.++.++.+...++.... ... ..-..-...|.|+.++|- ++ .++.|..+.. .+.+.
T Consensus 489 ~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~--l~e-~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~-~~~l~ 564 (1096)
T KOG1897|consen 489 KITIGVVSANASQVVVAGGGLALFYLEIEDGG--LRE-VSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDI-SMILT 564 (1096)
T ss_pred ceEEEEEeecceEEEEecCccEEEEEEeeccc--eee-eeeheecceeEEEecccCCCCCCcceEEEEEeecce-EEEEE
Confidence 34444444444455555555555555555221 111 111113467999999975 22 5666666663 34444
Q ss_pred ECCCceEEEEecCCCC---CCeEEEEEecCCCEEEEEecCCeEEEEEcC---CC--------------eeeeeeceeEEE
Q psy10566 377 NIETELLRVKLNHSPE---DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE---GQ--------------VLDSWEGVRVNC 436 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~--------------~~~~~~~~~v~~ 436 (604)
-..+.........+.. ..|.-..|--|..++.++..||.+.-|-++ |. .++.+....-+.
T Consensus 565 ~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~ 644 (1096)
T KOG1897|consen 565 FLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTA 644 (1096)
T ss_pred ECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceE
Confidence 4444444443322222 234455565678999999999998777552 21 111111111111
Q ss_pred EE---------EcCCCCEE-----------------------EEEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECC
Q psy10566 437 LW---------CRSDGKSV-----------------------LAADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDA 482 (604)
Q Consensus 437 l~---------~s~~g~~l-----------------------~~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~ 482 (604)
+. ++.+++.+ ++....+.+++.-+..-.. ...+........+++.+
T Consensus 645 vfa~sdrP~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~l~~~~~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~ 724 (1096)
T KOG1897|consen 645 VFALSDRPTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDSLASANGGALTIGTIDEIQKLHIRTVPLGESPRRICYQE 724 (1096)
T ss_pred EEEeCCCCEEEEecCCcEEEeccchHHhhhhcccccccCCceEEEecCCceEEEEecchhhcceeeecCCCChhheEecc
Confidence 11 11111111 1111223333333322111 11122344556677776
Q ss_pred CCCEEEEEecC--------------CeEEEEecCCCceeeEeecc-ccceEEEEeeeCCCC-CcEEEEEe----------
Q psy10566 483 TDRLALLNVST--------------QGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGGAN-QDFVASGS---------- 536 (604)
Q Consensus 483 ~~~~l~~~~~d--------------g~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~l~sgs---------- 536 (604)
....+.+.+.. ..++++|-.+.+.+...+-. ......+.++-+..| +.+++.|.
T Consensus 725 ~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep 804 (1096)
T KOG1897|consen 725 SSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEP 804 (1096)
T ss_pred cceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCc
Confidence 44444444321 12677777666554433321 122334444444444 67788775
Q ss_pred CCCcEEEEeCCCCcceEEeeCC--CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 537 EDGKVYIWHVKRELPIATLSGH--TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 537 ~dg~I~iwd~~~~~~~~~l~~h--~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..|.|.||....++.+.....+ .+.|.++.--. ++++|.- ...|++|+..+++
T Consensus 805 ~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fn--gkllA~I--n~~vrLye~t~~~ 859 (1096)
T KOG1897|consen 805 VNGRIIVFEFEELNSLELVAETVVKGAVYALVEFN--GKLLAGI--NQSVRLYEWTTER 859 (1096)
T ss_pred ccceEEEEEEecCCceeeeeeeeeccceeehhhhC--CeEEEec--CcEEEEEEccccc
Confidence 2488999988875555555444 46666665432 5666554 5679999887773
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.27 Score=50.30 Aligned_cols=144 Identities=14% Similarity=0.145 Sum_probs=84.4
Q ss_pred CcEEEEEEcCCCCeEEEEE-----------CCC-eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 302 DEVWFCKFSPDGLKLATGS-----------KDT-TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs-----------~dg-~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.....|+|.++|+++++-. ..+ .|.+++-.+..+.......+...-.....+++.+++ |+++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~- 90 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPP- 90 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCC-
Confidence 3466789999999776642 223 677776543334443444444444556889999998 4444444
Q ss_pred ceEEEEE-ECCCc-----e--EEE-EecCC---CCCCeEEEEEecCCCEEEEEecC-------------------CeEEE
Q psy10566 370 CHELWVW-NIETE-----L--LRV-KLNHS---PEDSLTSCSWNRDGTKFVCGGIR-------------------GQFYQ 418 (604)
Q Consensus 370 ~~~i~vw-d~~~~-----~--~~~-~~~~~---~~~~v~~~~~~~~~~~l~s~~~d-------------------g~i~i 418 (604)
.|+.| |.... + .+. .+... +......++|.|||.+.++-+.. |.|.-
T Consensus 91 --~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r 168 (367)
T TIGR02604 91 --DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFR 168 (367)
T ss_pred --eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEE
Confidence 35545 44321 1 121 12211 12347789999999877665521 45666
Q ss_pred EEcCCCeeeeeec-e-eEEEEEEcCCCCEEEEEe
Q psy10566 419 CDIEGQVLDSWEG-V-RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 419 wd~~~~~~~~~~~-~-~v~~l~~s~~g~~l~~~~ 450 (604)
++.++..+..+.. . ....++|+++|+.+++-.
T Consensus 169 ~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 169 YNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred EecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence 6666655444432 2 367889999988766544
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=96.08 E-value=1.8 Score=43.43 Aligned_cols=229 Identities=14% Similarity=0.152 Sum_probs=115.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE---EEEe---cCCCCCCeEEEEEecC----CCEEEEEecC-----
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL---RVKL---NHSPEDSLTSCSWNRD----GTKFVCGGIR----- 413 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~---~~~~---~~~~~~~v~~~~~~~~----~~~l~s~~~d----- 413 (604)
..++|+|.|||+.+++ ...| .|++++ ..+.. +... ..........++++|+ +...++.+..
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G--~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSG--RIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTT--EEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred CceEEEEeCCCcEEEE-eCCc--eEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 3578999999877665 5566 899999 44433 2222 1234456899999994 3333333321
Q ss_pred ---CeEEEEEcCCC---------eeeeee-----ceeEEEEEEcCCCCEEEEEeCC-------------CeEEEEEcCCC
Q psy10566 414 ---GQFYQCDIEGQ---------VLDSWE-----GVRVNCLWCRSDGKSVLAADTH-------------HRIRTYNFEHL 463 (604)
Q Consensus 414 ---g~i~iwd~~~~---------~~~~~~-----~~~v~~l~~s~~g~~l~~~~~d-------------g~I~i~d~~~~ 463 (604)
..|.-|..+.. .+.... .|....+.|.|||...++.+.. |.|.-.+....
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~ 158 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS 158 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCc
Confidence 23444444221 111212 3567889999999776666543 34444443322
Q ss_pred c------------cccccc-CCCCeeEEEECCC-CCEEEEEec-CC--eEEEEecCCC----------------------
Q psy10566 464 T------------DSNLLQ-EDHPVMSFTIDAT-DRLALLNVS-TQ--GVHLWDLRDR---------------------- 504 (604)
Q Consensus 464 ~------------~~~~~~-~~~~i~~~~~s~~-~~~l~~~~~-dg--~I~lwd~~~~---------------------- 504 (604)
. ...++. .-.....++|+|. +.+.++-.. ++ .|.+. ..+
T Consensus 159 ~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i--~~G~nYGWP~~~~~~~~~~~~~~~~ 236 (331)
T PF07995_consen 159 IPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRI--EPGGNYGWPYCEGGPKYSGPPIGDA 236 (331)
T ss_dssp B-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE---TT-B--TTTBSSSCSTTSS-ECTG
T ss_pred CCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEe--ccCCcCCCCCCcCCCCCCCCccccc
Confidence 0 001111 1223457889998 554443221 21 23322 211
Q ss_pred -------ceeeEeeccccceEEEEee---eC-CCCCcEEEEEeCCCcEEEEeCCCCcceE---E-eeCCCCCeeEEEEcC
Q psy10566 505 -------ILLRKFQGVTQGQFTIHSC---FG-GANQDFVASGSEDGKVYIWHVKRELPIA---T-LSGHTRTVSCVAWNP 569 (604)
Q Consensus 505 -------~~~~~~~~~~~~~~~i~~~---~~-~~~~~~l~sgs~dg~I~iwd~~~~~~~~---~-l~~h~~~V~~v~~sp 569 (604)
.++..+..|.. ...+... .+ .-.|.++++.-..+.|....++.+..+. . +......+..|++.|
T Consensus 237 ~~~~~~~~P~~~~~~~~a-p~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~p 315 (331)
T PF07995_consen 237 PSCPGFVPPVFAYPPHSA-PTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGP 315 (331)
T ss_dssp SS-TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEET
T ss_pred cCCCCcCccceeecCccc-cCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcC
Confidence 11122222211 1111111 01 1256677777667788888877543322 2 223445899999999
Q ss_pred CCCcEEEEEeCCCcEE
Q psy10566 570 VYHQMIASVSDDCTVR 585 (604)
Q Consensus 570 ~~~~~l~s~s~Dg~I~ 585 (604)
| +.++++-+.+|.|.
T Consensus 316 D-G~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 316 D-GALYVSDDSDGKIY 330 (331)
T ss_dssp T-SEEEEEE-TTTTEE
T ss_pred C-CeEEEEECCCCeEe
Confidence 9 78888877888874
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.41 Score=42.99 Aligned_cols=180 Identities=11% Similarity=0.076 Sum_probs=92.8
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCL 437 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l 437 (604)
+|.++.+.|.-|...|++||+.+|+.+....-.. ..+..=-...-+..+ ..
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~-~~~FgEGit~~gd~~---------------------------y~- 105 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAP-DTVFGEGITKLGDYF---------------------------YQ- 105 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCC-ccccccceeeccceE---------------------------EE-
Confidence 4567778887777789999999998776554221 111000000001111 11
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc--
Q psy10566 438 WCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ-- 515 (604)
Q Consensus 438 ~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-- 515 (604)
..-.+|.-..||.++.+....+...+.-..++. ++..++.+....+++.-|.++.....++.-...
T Consensus 106 ----------LTw~egvaf~~d~~t~~~lg~~~y~GeGWgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~ 173 (262)
T COG3823 106 ----------LTWKEGVAFKYDADTLEELGRFSYEGEGWGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGV 173 (262)
T ss_pred ----------EEeccceeEEEChHHhhhhcccccCCcceeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCe
Confidence 111244555666666555544444444444443 444455555555666666665443333321111
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee------------CCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS------------GHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~------------~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
++..+.-+-+ -+|...|-.-.+..|...|..+|+.+..+. .|....+.+++.|+.+++++||-
T Consensus 174 pv~~LNELE~-VdG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 174 PVSKLNELEW-VDGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred ecccccceee-eccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence 1111111111 245455544445556666666666655442 24557789999999667887763
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.38 Score=48.23 Aligned_cols=108 Identities=13% Similarity=0.147 Sum_probs=75.5
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
..++|.++.||+|.+.||.--.|++|.+++..+.........+.+..+..|...+|+.+ .-++.....| +-+|-..
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G---~e~y~v~ 140 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG---IEFYQVL 140 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC---eEEEEEc
Confidence 45699999999999999999999999999985333333333344445567999999876 5677777777 6666655
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEe
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 411 (604)
..+...+....+.-.|.-..|.++.+.++.++
T Consensus 141 pekrslRlVks~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 141 PEKRSLRLVKSHNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred hhhhhhhhhhhcccCccEEEEccccceEeeec
Confidence 44433333345666788788888777655444
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.98 E-value=1.5 Score=41.54 Aligned_cols=201 Identities=13% Similarity=0.070 Sum_probs=114.1
Q ss_pred CCeEEEEEecCC-CEEEEEecCCe-EEEEEcCC-Ceeeeeec----eeEEEEEEcCCCCEEEEEeCC-----CeEEEEEc
Q psy10566 393 DSLTSCSWNRDG-TKFVCGGIRGQ-FYQCDIEG-QVLDSWEG----VRVNCLWCRSDGKSVLAADTH-----HRIRTYNF 460 (604)
Q Consensus 393 ~~v~~~~~~~~~-~~l~s~~~dg~-i~iwd~~~-~~~~~~~~----~~v~~l~~s~~g~~l~~~~~d-----g~I~i~d~ 460 (604)
.....++|+|.. .-++.+-.-|+ ..++|.++ +....... |-.-.-.|++||.+|.+.-.| |.|-+||.
T Consensus 68 aR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~ 147 (366)
T COG3490 68 ARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA 147 (366)
T ss_pred cccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence 345567788744 34555555554 46778753 22222211 223345799999999887654 78999999
Q ss_pred CCC--cccccccCCCCeeEEEECCCCCEEEEEec------------------CCeEEEEecCCCceeeEeecc-ccceEE
Q psy10566 461 EHL--TDSNLLQEDHPVMSFTIDATDRLALLNVS------------------TQGVHLWDLRDRILLRKFQGV-TQGQFT 519 (604)
Q Consensus 461 ~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------------------dg~I~lwd~~~~~~~~~~~~~-~~~~~~ 519 (604)
+.. +.-....+.-....+.+.+||+.++++.. .-++.+.|-.+|..+.+..-. .....+
T Consensus 148 r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lS 227 (366)
T COG3490 148 REGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLS 227 (366)
T ss_pred ccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcc
Confidence 853 22233345556678899999999887643 112445555555555443322 122345
Q ss_pred EEeeeCCCCCcEEEEEeCCCc-----EEEEeCCCCcceEEeeCC-------CCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 520 IHSCFGGANQDFVASGSEDGK-----VYIWHVKRELPIATLSGH-------TRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~-----I~iwd~~~~~~~~~l~~h-------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
++.+...++|..++.+-..|- -.+=....++++.-+... ...|-+|+.+.+.+...+|+-..+..-+|
T Consensus 228 iRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~ 307 (366)
T COG3490 228 IRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIW 307 (366)
T ss_pred eeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEE
Confidence 555666666665554432221 111122334444444322 24577788887645555555555667789
Q ss_pred CCCCCC
Q psy10566 588 GPHLNT 593 (604)
Q Consensus 588 ~~~~~~ 593 (604)
|.+++.
T Consensus 308 da~tG~ 313 (366)
T COG3490 308 DAATGA 313 (366)
T ss_pred EcCCCc
Confidence 998886
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=95.84 E-value=2.2 Score=47.69 Aligned_cols=189 Identities=14% Similarity=0.147 Sum_probs=91.8
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCe-------------EEEEEec--CCCEEEEEec----------C
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSL-------------TSCSWNR--DGTKFVCGGI----------R 413 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v-------------~~~~~~~--~~~~l~s~~~----------d 413 (604)
+..++.++.|+ .+.-.|.++|+....+... +.| ..+.-.| .+..+++|+. +
T Consensus 260 ~~rV~~~T~Dg--~LiALDA~TGk~~W~fg~~--G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~ 335 (764)
T TIGR03074 260 ARRIILPTSDA--RLIALDADTGKLCEDFGNN--GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPS 335 (764)
T ss_pred CCEEEEecCCC--eEEEEECCCCCEEEEecCC--CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCC
Confidence 44788888887 8999999999988765421 111 0111112 2345666643 6
Q ss_pred CeEEEEEc-CCCeeeeeeceeEEEEEEcCCCCEEEEEeCCC-eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe
Q psy10566 414 GQFYQCDI-EGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH-RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 414 g~i~iwd~-~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg-~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 491 (604)
|.|+-+|. +|+.+-.+.......-...+.+.....++.+. ...-+|.+.+.. .+....+. ..+....+......
T Consensus 336 G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glv--y~ptGn~~--pd~~g~~r~~~~n~ 411 (764)
T TIGR03074 336 GVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLV--YLPMGNQT--PDQWGGDRTPADEK 411 (764)
T ss_pred cEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeE--EEeCCCcc--ccccCCccccCccc
Confidence 78999998 57776665431000000011222111111110 112222222111 00000000 00000000000111
Q ss_pred cCCeEEEEecCCCceeeEeeccccceEE------EEeeeCC-CCCc---EEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 492 STQGVHLWDLRDRILLRKFQGVTQGQFT------IHSCFGG-ANQD---FVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 492 ~dg~I~lwd~~~~~~~~~~~~~~~~~~~------i~~~~~~-~~~~---~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
..+.|.-.|.++|+..-.++........ ....... .+|+ .++.++.+|.++++|.++|+++...
T Consensus 412 y~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 412 YSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred ccceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 2455777888888887766642211110 0111111 2453 8999999999999999999987754
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG2817|consensus | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.13 Score=50.59 Aligned_cols=104 Identities=16% Similarity=0.238 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHhCCccC-C------hhHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHH
Q psy10566 87 EDIVRLIGQYLRTIGLDRTADLLMQESGCKLD-H------PSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKF 159 (604)
Q Consensus 87 ~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~-~------~~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~ 159 (604)
+.+..+|..|+...|..+.+..|-+|+|...+ . ..+.++-+++.+|+-.-|+..+..-+..+.+ .-..+-|
T Consensus 117 ~~ln~ai~~h~~rqGm~dv~~~l~~Ea~~~~~~~~~~~~F~el~~Iv~~lke~Dl~~aLeWa~~~~~~L~~--~~s~LE~ 194 (394)
T KOG2817|consen 117 QVLNEAIVYHFYRQGMDDVGECLIKEAGLSEDESKSRTEFVELNQIVEALKERDLEPALEWAESNRQKLKE--KSSSLEF 194 (394)
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHHhccchhHHHHHHHhhhhhcc--ccccHHH
Confidence 33589999999999999999999999997764 1 2367888999999877777766544332321 1235668
Q ss_pred HHHHHHHHHHHhcCChh--HHHHHHHhhcCCCCCC
Q psy10566 160 LILEQKYLEYLEDGRVL--DALHVLRNELTPLNHN 192 (604)
Q Consensus 160 ~~~~~~~le~le~~~~~--~Al~~l~~~l~p~~~~ 192 (604)
.+...+|+.++..|... +|+...|+.++|+...
T Consensus 195 ~Lh~l~fl~l~~~g~~~~~eAl~Yar~~~~~F~~~ 229 (394)
T KOG2817|consen 195 KLHSLHFLSLIRGGKSDQREALRYARTHFAPFVAD 229 (394)
T ss_pred HHHHHHHHHHHhcCCcCcHHHHHHHHHhcCccccc
Confidence 89999999999988777 9999999888998543
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.04 Score=36.96 Aligned_cols=30 Identities=20% Similarity=0.389 Sum_probs=27.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~ 331 (604)
..|.+++|+|...+||.|+.+|.|.|+.++
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 469999999999999999999999999885
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.45 Score=51.10 Aligned_cols=116 Identities=17% Similarity=0.288 Sum_probs=78.5
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQ 418 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~i 418 (604)
.++......+.-+.-|.-+ .++....++ .++.|||...+...........+.|.++.|.. +++.+++.|..+.|.+
T Consensus 23 ~~~~T~i~~~~li~gss~~-k~a~V~~~~-~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l 100 (631)
T PF12234_consen 23 STFETGISNPSLISGSSIK-KIAVVDSSR-SELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLL 100 (631)
T ss_pred EEEecCCCCcceEeecccC-cEEEEECCC-CEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEE
Confidence 3333333445555555544 445555555 38999999998866655545578899999964 8899999999999998
Q ss_pred EEc-----C--C---Ce-----eeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEc
Q psy10566 419 CDI-----E--G---QV-----LDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNF 460 (604)
Q Consensus 419 wd~-----~--~---~~-----~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~ 460 (604)
|.- . + .. +..+..|+|.+..|.++|..++.++ +.+.++|-
T Consensus 101 ~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 101 YTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred EEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 853 1 1 12 2233456888999999998766553 46777764
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=95.57 E-value=4.5 Score=44.89 Aligned_cols=29 Identities=28% Similarity=0.478 Sum_probs=23.8
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
...|..|.++|+|.+++..|..+ |.|..+
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~---v~V~~L 112 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG---VVVLEL 112 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc---EEEEEe
Confidence 45788999999999999999987 555555
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF06588 Muskelin_N: Muskelin N-terminus; InterPro: IPR010565 This entry represents the N-terminal region of muskelin and is found in conjunction with several IPR006652 from INTERPRO repeats | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.016 Score=51.24 Aligned_cols=36 Identities=28% Similarity=0.515 Sum_probs=33.4
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCCh
Q psy10566 85 TDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHP 120 (604)
Q Consensus 85 ~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~ 120 (604)
-..|.+||++.||+..||.+|+++|++.+++++|+|
T Consensus 164 re~eaiRlcLKHlRq~~y~~aFesLqk~t~v~LE~p 199 (199)
T PF06588_consen 164 REKEAIRLCLKHLRQRGYLEAFESLQKQTGVQLEHP 199 (199)
T ss_pred HHHHHHHHHHHHhhhcCchhHHHHHHHHcCCCCCCC
Confidence 467889999999999999999999999999999864
|
Muskelin is an intracellular, kelch repeat protein that is needed in cell-spreading responses to the matrix adhesion molecule, thrombospondin-1 []. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.051 Score=36.49 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=29.8
Q ss_pred CCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe
Q psy10566 391 PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV 425 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 425 (604)
....|.+++|+|....+|.++.+|.|.+|.++++.
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~qr 44 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLNWQR 44 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEECCCcC
Confidence 34568999999999999999999999999887654
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=95.43 E-value=2.9 Score=40.99 Aligned_cols=227 Identities=10% Similarity=0.039 Sum_probs=104.6
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
...+|.|..+ ..+++| ..+. |+...+...+.+.+..-..-......+....++. ...++..+ .|+. ..+.|+
T Consensus 63 ~l~~I~f~~~-~g~ivG-~~g~--ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~-~~l~~~~G--~iy~-T~DgG~ 134 (302)
T PF14870_consen 63 HLNSISFDGN-EGWIVG-EPGL--LLHTTDGGKTWERVPLSSKLPGSPFGITALGDGS-AELAGDRG--AIYR-TTDGGK 134 (302)
T ss_dssp EEEEEEEETT-EEEEEE-ETTE--EEEESSTTSS-EE----TT-SS-EEEEEEEETTE-EEEEETT----EEE-ESSTTS
T ss_pred eEEEEEecCC-ceEEEc-CCce--EEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCc-EEEEcCCC--cEEE-eCCCCC
Confidence 3566777653 344544 4453 3444434445554432111122333444444443 33334444 2322 223333
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee---eceeEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW---EGVRVNCLWCRSDGKSVLAADTHHRIRTYN 459 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d 459 (604)
.-..+.......+..+..+++|.+++++.......-||.-......+ ...++..+.|.|++...+++ ..|.|+.=+
T Consensus 135 tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 135 TWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp SEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred CeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 22232334457788999999999888887666667888754333222 33489999999998765544 888888887
Q ss_pred cCC-Ccc-----cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc---ccceEEEEeeeCCCCCc
Q psy10566 460 FEH-LTD-----SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV---TQGQFTIHSCFGGANQD 530 (604)
Q Consensus 460 ~~~-~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~ 530 (604)
... ... .........+..+++.+++...++|+.. .+ +.....|+.-++.... ....+.| .|..+ .+
T Consensus 214 ~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G-~l-~~S~DgGktW~~~~~~~~~~~n~~~i--~f~~~-~~ 288 (302)
T PF14870_consen 214 DPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG-TL-LVSTDGGKTWQKDRVGENVPSNLYRI--VFVNP-DK 288 (302)
T ss_dssp -TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT--E-EEESSTTSS-EE-GGGTTSSS---EE--EEEET-TE
T ss_pred CCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCc-cE-EEeCCCCccceECccccCCCCceEEE--EEcCC-Cc
Confidence 222 111 1111234458899999887777766544 32 3444555554444321 2222333 44433 34
Q ss_pred EEEEEeCCCcEEEE
Q psy10566 531 FVASGSEDGKVYIW 544 (604)
Q Consensus 531 ~l~sgs~dg~I~iw 544 (604)
-++. +.+|.|.-|
T Consensus 289 gf~l-G~~G~ll~~ 301 (302)
T PF14870_consen 289 GFVL-GQDGVLLRY 301 (302)
T ss_dssp EEEE--STTEEEEE
T ss_pred eEEE-CCCcEEEEe
Confidence 4444 478877554
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.34 E-value=2.3 Score=39.15 Aligned_cols=201 Identities=11% Similarity=0.033 Sum_probs=109.2
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCC---CEEEEEecCCeEEEEEcCC---Ceeeee-------eceeEEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG---TKFVCGGIRGQFYQCDIEG---QVLDSW-------EGVRVNCLW 438 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~---~~~~~~-------~~~~v~~l~ 438 (604)
.|.-||..+.+........ .++.++.+--.+ .+.+.++..-.|.-||... ...++. ...+.++-.
T Consensus 38 ~v~r~D~~qn~v~ra~ie~--p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~kknR~NDgk 115 (310)
T KOG4499|consen 38 EVHRYDIEQNKVYRAKIEG--PPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDRKKNRLNDGK 115 (310)
T ss_pred ceehhhhhhhheEEEEEec--CcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCchHHhcccccCc
Confidence 5777888776544332211 123344443332 2333333333455566422 122221 123567778
Q ss_pred EcCCCCEEEEEeC---------CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEe--cCCCce
Q psy10566 439 CRSDGKSVLAADT---------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWD--LRDRIL 506 (604)
Q Consensus 439 ~s~~g~~l~~~~~---------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd--~~~~~~ 506 (604)
.+|+|+++.-.-. .|.++.|-.... ...+...-.--+.++|+.+.+.+... +.+-+|.-|| ..+|..
T Consensus 116 vdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~-v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~ 194 (310)
T KOG4499|consen 116 VDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQ-VELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDL 194 (310)
T ss_pred cCCCCceeeeeeccccccccccccEEEEeccCCC-ceeeehhccCCccccccccCcEEEEEccCceEEeeeecCCCcccc
Confidence 8999998432222 244555543321 11111112233567888777665544 4466786777 555532
Q ss_pred -----eeEeec------cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCC-cE
Q psy10566 507 -----LRKFQG------VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH-QM 574 (604)
Q Consensus 507 -----~~~~~~------~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~-~~ 574 (604)
+..+.. .......| ..+|++.++.-..|+|...|..+|+.+.++.-....|++++|--.+- -+
T Consensus 195 snr~~i~dlrk~~~~e~~~PDGm~I-----D~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~ 269 (310)
T KOG4499|consen 195 SNRKVIFDLRKSQPFESLEPDGMTI-----DTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDIL 269 (310)
T ss_pred cCcceeEEeccCCCcCCCCCCcceE-----ccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEE
Confidence 222211 11111122 35788888888899999999999999999998899999999963312 34
Q ss_pred EEEEeC
Q psy10566 575 IASVSD 580 (604)
Q Consensus 575 l~s~s~ 580 (604)
.+|+..
T Consensus 270 yvT~aa 275 (310)
T KOG4499|consen 270 YVTTAA 275 (310)
T ss_pred EEEehh
Confidence 445443
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=3.9 Score=41.10 Aligned_cols=274 Identities=11% Similarity=0.037 Sum_probs=133.8
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE-eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT-LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~-l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
...+.+|+|..+..-+|+|. +|. ||...+...+++.... +......+.++.|.++ ..+ .++..+ . +|...
T Consensus 45 ~~~l~~v~F~d~~~g~avG~-~G~--il~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~-~~G~~g--~--i~~S~ 115 (334)
T PRK13684 45 EANLLDIAFTDPNHGWLVGS-NRT--LLETNDGGETWEERSLDLPEENFRLISISFKGD-EGW-IVGQPS--L--LLHTT 115 (334)
T ss_pred CCceEEEEEeCCCcEEEEEC-CCE--EEEEcCCCCCceECccCCcccccceeeeEEcCC-cEE-EeCCCc--e--EEEEC
Confidence 45788899986666677664 453 4555433334443211 1112334778888654 333 344444 2 22222
Q ss_pred C-ceEEEEecCC--CCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 380 T-ELLRVKLNHS--PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 380 ~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
+ |+.-...... .......+.....+. +..++..|.|..-+-.|+...... ...+.++.+.+++..+++ +..|
T Consensus 116 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~g~~G~i~~S~DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~-g~~G 193 (334)
T PRK13684 116 DGGKNWTRIPLSEKLPGSPYLITALGPGT-AEMATNVGAIYRTTDGGKNWEALVEDAAGVVRNLRRSPDGKYVAV-SSRG 193 (334)
T ss_pred CCCCCCeEccCCcCCCCCceEEEEECCCc-ceeeeccceEEEECCCCCCceeCcCCCcceEEEEEECCCCeEEEE-eCCc
Confidence 2 2222222100 111122222222222 333444555443333344433322 225788888998765544 4455
Q ss_pred eEEE-EEcCCCccc-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc-ccceEEEEeeeCCCCCc
Q psy10566 454 RIRT-YNFEHLTDS-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGGANQD 530 (604)
Q Consensus 454 ~I~i-~d~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 530 (604)
.+.. +|-....-. ........+.++.+.++++.++++ ..|.+++=....+..-...... ......+..+.+.+++.
T Consensus 194 ~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~ 272 (334)
T PRK13684 194 NFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGE 272 (334)
T ss_pred eEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCC
Confidence 5443 222211111 111235678899999999877765 4565543233444333322211 10112233344456666
Q ss_pred EEEEEeCCCcEEEEeCCCCcceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 531 FVASGSEDGKVYIWHVKRELPIATLSG---HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 531 ~l~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.+++ +.+|.|. .....|+.-..... -....+.+.|..+ ...+ ..+..|.|.-|+-.
T Consensus 273 ~~~~-G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~-~~~~-~~G~~G~il~~~~~ 331 (334)
T PRK13684 273 IWAG-GGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDP-EKGF-VLGQRGVLLRYVGS 331 (334)
T ss_pred EEEE-cCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCC-CceE-EECCCceEEEecCC
Confidence 5554 4677664 44555555444432 1235777887765 4444 46678998888754
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.14 E-value=3.2 Score=39.80 Aligned_cols=143 Identities=19% Similarity=0.180 Sum_probs=86.5
Q ss_pred cEEEEEEcCCCCeEEEEE---CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE-EC
Q psy10566 303 EVWFCKFSPDGLKLATGS---KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW-NI 378 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs---~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw-d~ 378 (604)
.+.+.++|+||+.+|... ....+.++... . .. ...+.+ ..+..-.|++++...+....+. ...++ +.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~-~~--~~~~~g--~~l~~PS~d~~g~~W~v~~~~~--~~~~~~~~ 95 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--G-PV--RPVLTG--GSLTRPSWDPDGWVWTVDDGSG--GVRVVRDS 95 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--C-cc--eeeccC--CccccccccCCCCEEEEEcCCC--ceEEEEec
Confidence 688999999999777655 23345555443 1 11 111232 3678889999977666655444 45555 33
Q ss_pred CCceE-EEEecCCCCC-CeEEEEEecCCCEEEEEe---cCCeEEEEEc----CC--Cee----eee--eceeEEEEEEcC
Q psy10566 379 ETELL-RVKLNHSPED-SLTSCSWNRDGTKFVCGG---IRGQFYQCDI----EG--QVL----DSW--EGVRVNCLWCRS 441 (604)
Q Consensus 379 ~~~~~-~~~~~~~~~~-~v~~~~~~~~~~~l~s~~---~dg~i~iwd~----~~--~~~----~~~--~~~~v~~l~~s~ 441 (604)
.++.. .......... .|..+.++|||..++... .++.|.+--+ ++ ..+ ... ....+..+.|.+
T Consensus 96 ~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~ 175 (253)
T PF10647_consen 96 ASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSD 175 (253)
T ss_pred CCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecC
Confidence 33322 2222222122 799999999999888766 3467777655 23 111 111 123688999999
Q ss_pred CCCEEEEEeCCCe
Q psy10566 442 DGKSVLAADTHHR 454 (604)
Q Consensus 442 ~g~~l~~~~~dg~ 454 (604)
++..++.+...+.
T Consensus 176 ~~~L~V~~~~~~~ 188 (253)
T PF10647_consen 176 DSTLVVLGRSAGG 188 (253)
T ss_pred CCEEEEEeCCCCC
Confidence 9998777766544
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=95.10 E-value=3.4 Score=39.81 Aligned_cols=213 Identities=10% Similarity=0.088 Sum_probs=124.5
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce---eEeeEEecc-----CCCCeeEEEECCCCCe------------
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT---CQHRKTLEG-----HTLGVAYLAWSPDSSH------------ 361 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~---~~~~~~l~~-----h~~~V~~l~~spd~~~------------ 361 (604)
..-|.|+|+|.+.+-++....+...+||..+.+.. .....++.. .....+.+.|+....+
T Consensus 23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred cccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 34688999999988787777889999998622111 122334332 1345778888754333
Q ss_pred EEEEeCCCceEEEEEECCCceE-----EEEecCCCCCCe-EEEEEec--CCCEEEEEe-cCCeEEEEEcCCCeeee---e
Q psy10566 362 LLVVGPEDCHELWVWNIETELL-----RVKLNHSPEDSL-TSCSWNR--DGTKFVCGG-IRGQFYQCDIEGQVLDS---W 429 (604)
Q Consensus 362 l~s~~~d~~~~i~vwd~~~~~~-----~~~~~~~~~~~v-~~~~~~~--~~~~l~s~~-~dg~i~iwd~~~~~~~~---~ 429 (604)
++.++.++ +|.-|...-+.. ...+.......| ..+++.. .+.+|..+. ..++|.+||-.-..+.. +
T Consensus 103 Fif~tEdG--TisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F 180 (336)
T TIGR03118 103 FLFVTEDG--TLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSF 180 (336)
T ss_pred EEEEeCCc--eEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCc
Confidence 56667777 788887532221 122222222333 3455554 345555544 46788888864332211 1
Q ss_pred ec---------e---------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECC------C
Q psy10566 430 EG---------V---------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDA------T 483 (604)
Q Consensus 430 ~~---------~---------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~------~ 483 (604)
.. . -|+-..-.++++.-+.+...|.|-+||....-..++.. .-.....++..| .
T Consensus 181 ~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as~g~LNaPWG~a~APa~FG~~s 260 (336)
T TIGR03118 181 IDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVASSGRLNAPWGLAIAPESFGSLS 260 (336)
T ss_pred cCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEeccCCcccCCceeeeChhhhCCCC
Confidence 10 0 12222233444444555556889999987654433322 123445666654 5
Q ss_pred CCEEEEEecCCeEEEEecCCCceeeEeeccccc
Q psy10566 484 DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516 (604)
Q Consensus 484 ~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~ 516 (604)
+.+|+-...||+|..||..+++.+-.+......
T Consensus 261 g~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~ 293 (336)
T TIGR03118 261 GALLVGNFGDGTINAYDPQSGAQLGQLLDPDNH 293 (336)
T ss_pred CCeEEeecCCceeEEecCCCCceeeeecCCCCC
Confidence 677888888999999999998877777654443
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=94.90 E-value=4.9 Score=40.59 Aligned_cols=187 Identities=18% Similarity=0.253 Sum_probs=109.1
Q ss_pred cCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEc----CCCCE--EEEEeC-C---CeEEEEEcCC--Ccccccc
Q psy10566 402 RDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCR----SDGKS--VLAADT-H---HRIRTYNFEH--LTDSNLL 469 (604)
Q Consensus 402 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s----~~g~~--l~~~~~-d---g~I~i~d~~~--~~~~~~~ 469 (604)
|....++....++-+.+||++|+.+..+...+.+.+.+- -.|+. +++++. + .+|++|.+.. +....+.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~Gk~lq~~~~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~ 145 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDGKELQSLPVGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVT 145 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS-EEEEE-SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-C
T ss_pred cccceEEEEeCCCCEEEEcCCCcEEEeecCCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcC
Confidence 355677888888899999999999988875544443322 13433 344432 2 4699997753 2221111
Q ss_pred c-------CCCCeeEEEE--CC-CCC-EEEEEecCCeEEEEecC---CC----ceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 470 Q-------EDHPVMSFTI--DA-TDR-LALLNVSTQGVHLWDLR---DR----ILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 470 ~-------~~~~i~~~~~--s~-~~~-~l~~~~~dg~I~lwd~~---~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
. ....+..+|+ ++ ++. ++++...+|.+..|.+. .+ +.+++|....+ +..|.......+
T Consensus 146 ~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ----~EGCVVDDe~g~ 221 (381)
T PF02333_consen 146 DPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQ----PEGCVVDDETGR 221 (381)
T ss_dssp BTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-----EEEEEEETTTTE
T ss_pred CCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCc----ceEEEEecccCC
Confidence 1 1233566665 33 344 66677888988888774 23 45777765443 333444566678
Q ss_pred EEEEeCCCcEEEEeCCC-----CcceEEeeC--CCCCeeEEEEc--CCC-CcEEEEEeCCCcEEEECCCCC
Q psy10566 532 VASGSEDGKVYIWHVKR-----ELPIATLSG--HTRTVSCVAWN--PVY-HQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~-----~~~~~~l~~--h~~~V~~v~~s--p~~-~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
|+.|-++--|.-|+.+. ++.+....+ ....|-.++.- +++ +.+|+|.-.+++..||+....
T Consensus 222 LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 222 LYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred EEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 99999998888888762 223333333 24567777774 332 457777777889999998754
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=1.3 Score=47.96 Aligned_cols=188 Identities=9% Similarity=0.035 Sum_probs=91.2
Q ss_pred CCCCeEEEEeCCCc----eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeee
Q psy10566 357 PDSSHLLVVGPEDC----HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLD 427 (604)
Q Consensus 357 pd~~~l~s~~~d~~----~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~ 427 (604)
.++..++.||.++. ..++.||..+......-... ..........-++..++.||.++ .+..||.......
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELI-YPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCC-cccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 34556666665431 15888998887654322111 11111112223677888888653 4667787544333
Q ss_pred eeece---eEEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecC---
Q psy10566 428 SWEGV---RVNCLWCRSDGKSVLAADTH------HRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVST--- 493 (604)
Q Consensus 428 ~~~~~---~v~~l~~s~~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~d--- 493 (604)
..... +....+..-+++..+.|+.+ ..+..||..+.+-...... .....++ ...++...++|+.+
T Consensus 372 ~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~ 450 (534)
T PHA03098 372 EEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCA-IYHDGKIYVIGGISYID 450 (534)
T ss_pred eCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceE-EEECCEEEEECCccCCC
Confidence 32211 11112223356666666632 4588899876533222111 1111122 22355666666542
Q ss_pred -----CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCC
Q psy10566 494 -----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRE 549 (604)
Q Consensus 494 -----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~ 549 (604)
..+.+||..+++-... ............+. .++++++.|+.+ +.|.+||..+.
T Consensus 451 ~~~~~~~v~~yd~~~~~W~~~-~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 451 NIKVYNIVESYNPVTNKWTEL-SSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred CCcccceEEEecCCCCceeeC-CCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 2388899877543221 11111111111122 256677777654 46777777654
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=5.6 Score=39.96 Aligned_cols=227 Identities=11% Similarity=0.044 Sum_probs=108.5
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE---eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT---LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~---l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
.+.++.|.++ ..+++| ..+. ||...+...+++.... +.++.. ...+..+ +..+ .++..+ .|.. ..+
T Consensus 91 ~l~~v~~~~~-~~~~~G-~~g~--i~~S~DgG~tW~~~~~~~~~~~~~~--~i~~~~~-~~~~-~~g~~G--~i~~-S~D 159 (334)
T PRK13684 91 RLISISFKGD-EGWIVG-QPSL--LLHTTDGGKNWTRIPLSEKLPGSPY--LITALGP-GTAE-MATNVG--AIYR-TTD 159 (334)
T ss_pred ceeeeEEcCC-cEEEeC-CCce--EEEECCCCCCCeEccCCcCCCCCce--EEEEECC-Ccce-eeeccc--eEEE-ECC
Confidence 4677888654 344444 4444 4444433334443321 222222 2222222 2223 334443 2322 222
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEE-EEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ-CDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i-wd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
.|+.-..+.......+.++.+.|++.++++ +..|.+.. +|-.++...... ...+.++.+.+++..++++ ..|.+
T Consensus 160 gG~tW~~~~~~~~g~~~~i~~~~~g~~v~~-g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~ 237 (334)
T PRK13684 160 GGKNWEALVEDAAGVVRNLRRSPDGKYVAV-SSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQI 237 (334)
T ss_pred CCCCceeCcCCCcceEEEEEECCCCeEEEE-eCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEE
Confidence 333333333333567889999998765544 44565543 333333333322 2368889999998876655 45766
Q ss_pred EEEEcCCCccccccc-----CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc-eEEEEeeeCCCCC
Q psy10566 456 RTYNFEHLTDSNLLQ-----EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG-QFTIHSCFGGANQ 529 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 529 (604)
.+-....+..-.... ....+..+.+.+++..++++ .+|.+. .....++.-......... .......+. .++
T Consensus 238 ~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~-~~~ 314 (334)
T PRK13684 238 RFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFL-DPE 314 (334)
T ss_pred EEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEe-CCC
Confidence 532233322211111 12457788899887755544 566554 344444443333211111 111222332 344
Q ss_pred cEEEEEeCCCcEEEEeC
Q psy10566 530 DFVASGSEDGKVYIWHV 546 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~ 546 (604)
+.++ .+..|.|.-|+-
T Consensus 315 ~~~~-~G~~G~il~~~~ 330 (334)
T PRK13684 315 KGFV-LGQRGVLLRYVG 330 (334)
T ss_pred ceEE-ECCCceEEEecC
Confidence 4444 557888877653
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.59 E-value=2 Score=45.69 Aligned_cols=145 Identities=8% Similarity=-0.068 Sum_probs=74.0
Q ss_pred CCCeEEEEECCC-----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 312 DGLKLATGSKDT-----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 312 dg~~lasgs~dg-----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
++..++.||.++ ++..||.. ..++.....+.........+ .-++...+.||.++...+..||..++.....
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~--~~~W~~~~~m~~~r~~~~~v--~~~~~iYviGG~~~~~sve~ydp~~n~W~~~ 346 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYI--SNNWIPIPPMNSPRLYASGV--PANNKLYVVGGLPNPTSVERWFHGDAAWVNM 346 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECC--CCEEEECCCCCchhhcceEE--EECCEEEEECCcCCCCceEEEECCCCeEEEC
Confidence 456667777543 45566665 44444444433222222222 2356667777764434688999877654332
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEecCC---eEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCCCeEEEEEc
Q psy10566 387 LNHSPEDSLTSCSWNRDGTKFVCGGIRG---QFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTHHRIRTYNF 460 (604)
Q Consensus 387 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~dg~I~i~d~ 460 (604)
-.-.. .........-+|+..+.||.++ .+..||.+.......... +....+..-+++..+.| |.+.+||.
T Consensus 347 ~~l~~-~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ydp 422 (480)
T PHA02790 347 PSLLK-PRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RNAEFYCE 422 (480)
T ss_pred CCCCC-CCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---CceEEecC
Confidence 22111 1111122233778888888654 466788765444332221 11122223455555555 35678887
Q ss_pred CCCc
Q psy10566 461 EHLT 464 (604)
Q Consensus 461 ~~~~ 464 (604)
.+.+
T Consensus 423 ~~~~ 426 (480)
T PHA02790 423 SSNT 426 (480)
T ss_pred CCCc
Confidence 6643
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=94.45 E-value=4 Score=37.61 Aligned_cols=141 Identities=23% Similarity=0.230 Sum_probs=87.5
Q ss_pred CCeEEEEEecCCCEEEEEec---------CCeEEEEEcCCCeeeeeece-eEEEEEEcCCCCEEEEE-eCCCeEEEEE--
Q psy10566 393 DSLTSCSWNRDGTKFVCGGI---------RGQFYQCDIEGQVLDSWEGV-RVNCLWCRSDGKSVLAA-DTHHRIRTYN-- 459 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~-~v~~l~~s~~g~~l~~~-~~dg~I~i~d-- 459 (604)
.+...-..+|+|++++-.-. .|.++.|-..++.-..|... -.+.++|+.+.+.+... +.+-.|.-||
T Consensus 109 nR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd 188 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYD 188 (310)
T ss_pred cccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeecC
Confidence 34566677899998543222 24555555555544444443 24567888877766554 4456777777
Q ss_pred cCCCcccc---cc--c-----CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 460 FEHLTDSN---LL--Q-----EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 460 ~~~~~~~~---~~--~-----~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
..++.... ++ . .....-.+++..+|.+.++..+.++|...|..+|+.+.++.-....+. ++||..++-
T Consensus 189 ~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qit--sccFgGkn~ 266 (310)
T KOG4499|consen 189 CPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQIT--SCCFGGKNL 266 (310)
T ss_pred CCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceE--EEEecCCCc
Confidence 44432111 11 1 112233566677899999999999999999999999999987765433 346666665
Q ss_pred cEEEEE
Q psy10566 530 DFVASG 535 (604)
Q Consensus 530 ~~l~sg 535 (604)
..+++.
T Consensus 267 d~~yvT 272 (310)
T KOG4499|consen 267 DILYVT 272 (310)
T ss_pred cEEEEE
Confidence 555544
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.23 Score=55.27 Aligned_cols=144 Identities=15% Similarity=0.097 Sum_probs=90.0
Q ss_pred cEEEEEEcCCCCeEEEE--ECCCeEEEEEeCCCCcee-EeeEEec------cCCCCeeEEEECCCCC-eEEEEeCCCceE
Q psy10566 303 EVWFCKFSPDGLKLATG--SKDTTVIIWDVDPVTFTC-QHRKTLE------GHTLGVAYLAWSPDSS-HLLVVGPEDCHE 372 (604)
Q Consensus 303 ~V~~v~fspdg~~lasg--s~dg~i~iwd~~~~~~~~-~~~~~l~------~h~~~V~~l~~spd~~-~l~s~~~d~~~~ 372 (604)
.|..+...+|++..++. +.+-.|..||+..-.... ....-|. ....-..++.|.|.=. ..+++..|. .
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dl--s 179 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDL--S 179 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhcccc--c
Confidence 56666777787755443 333478889987211110 0011111 1223456788988643 334455565 6
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec------eeEEEEEEcCCCCEE
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG------VRVNCLWCRSDGKSV 446 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~v~~l~~s~~g~~l 446 (604)
|.+..+..-.....- ......+++++|+|.|+.+++|-..|++.-|....+....+++ .+|.+++|.....++
T Consensus 180 l~V~~~~~~~~~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~efl 258 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFL 258 (1405)
T ss_pred hhhhhhhhhhhhhcc-cCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEE
Confidence 777665433222211 1344668999999999999999999999999887765555443 479999998877776
Q ss_pred EEE
Q psy10566 447 LAA 449 (604)
Q Consensus 447 ~~~ 449 (604)
++-
T Consensus 259 vvy 261 (1405)
T KOG3630|consen 259 VVY 261 (1405)
T ss_pred EEe
Confidence 654
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=94.25 E-value=3.1 Score=46.14 Aligned_cols=28 Identities=25% Similarity=0.294 Sum_probs=22.0
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEe
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDV 330 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~ 330 (604)
-.|..|.+||+|++||..|..| |.|-.+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~L 112 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLEL 112 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEe
Confidence 4799999999999999988765 444444
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=93.92 E-value=8.4 Score=39.32 Aligned_cols=193 Identities=10% Similarity=0.055 Sum_probs=92.4
Q ss_pred CCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEecc---CC----CCeeEEEECCCCCeEEEEeCC----CceEEEEEECC
Q psy10566 312 DGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEG---HT----LGVAYLAWSPDSSHLLVVGPE----DCHELWVWNIE 379 (604)
Q Consensus 312 dg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~---h~----~~V~~l~~spd~~~l~s~~~d----~~~~i~vwd~~ 379 (604)
+.++|+..+ ..+.|.|.|+.+.....+..+++.. +. .....+-.-|+|+.++++=.+ +.+-+.+.|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 455777776 6778999999855555555666553 11 222334456889888886332 23468889988
Q ss_pred CceEEEEecCC--CCCCeEEEEEecCCCEEEEEe--------------------cCCeEEEEEcCC-Ceeeeeec----e
Q psy10566 380 TELLRVKLNHS--PEDSLTSCSWNRDGTKFVCGG--------------------IRGQFYQCDIEG-QVLDSWEG----V 432 (604)
Q Consensus 380 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~--------------------~dg~i~iwd~~~-~~~~~~~~----~ 432 (604)
+.+........ ....-..+.|.|..+.+++.. ...++.+||+.. +.++.+.- .
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 87777666542 233456788889888888865 245899999964 45555442 2
Q ss_pred eEEEEEEcCC--CCEEEE-EeCCCeEEEEEc-CCCc-----cccc---------cc--------CCCCeeEEEECCCCCE
Q psy10566 433 RVNCLWCRSD--GKSVLA-ADTHHRIRTYNF-EHLT-----DSNL---------LQ--------EDHPVMSFTIDATDRL 486 (604)
Q Consensus 433 ~v~~l~~s~~--g~~l~~-~~~dg~I~i~d~-~~~~-----~~~~---------~~--------~~~~i~~~~~s~~~~~ 486 (604)
-...+.|..+ ..+-++ +.-..+|..|-- ..++ ...+ +. ...-|+.+.+|.|.++
T Consensus 246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf 325 (461)
T PF05694_consen 246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF 325 (461)
T ss_dssp EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence 3445555543 343333 333344444432 2211 0000 00 0245789999999999
Q ss_pred EEEEec-CCeEEEEecCCC
Q psy10566 487 ALLNVS-TQGVHLWDLRDR 504 (604)
Q Consensus 487 l~~~~~-dg~I~lwd~~~~ 504 (604)
|.+++- .|.|+.||+...
T Consensus 326 LYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 326 LYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp EEEEETTTTEEEEEE-SST
T ss_pred EEEEcccCCcEEEEecCCC
Confidence 988765 899999999874
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=93.89 E-value=9.4 Score=39.79 Aligned_cols=116 Identities=15% Similarity=0.156 Sum_probs=65.0
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCCC------CeEEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPDS------SHLLV 364 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd~------~~l~s 364 (604)
++...-..-+.|+|.|||++|++--..|.|++++-.. ........+. ........|+++|+- .+|..
T Consensus 24 ~va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~--~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYv 101 (454)
T TIGR03606 24 VLLSGLNKPWALLWGPDNQLWVTERATGKILRVNPET--GEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYI 101 (454)
T ss_pred EEECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCC--CceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEE
Confidence 3444556789999999998887765469999987542 2222222111 135778999999874 23333
Q ss_pred Ee-C-C------CceEEEEEECCCc-------eEEE-EecCCCCCCeEEEEEecCCCEEEEEecC
Q psy10566 365 VG-P-E------DCHELWVWNIETE-------LLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 365 ~~-~-d------~~~~i~vwd~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
+. . + ....|.-|.+... +.+. .........-..++|.|||.++++.+..
T Consensus 102 syt~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 102 SYTYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred EEeccCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCC
Confidence 32 1 1 1124655655321 1111 1111111224568899999877765554
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=93.86 E-value=13 Score=41.68 Aligned_cols=223 Identities=9% Similarity=0.073 Sum_probs=113.8
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCC-------CeEEEEEec----------------CCCEEEEEecCCe
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPED-------SLTSCSWNR----------------DGTKFVCGGIRGQ 415 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~-------~v~~~~~~~----------------~~~~l~s~~~dg~ 415 (604)
+..++.++.++ .|.-.|..+|+.+-++...... ....+++.. ++..++.++.|+.
T Consensus 194 gg~lYv~t~~~--~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~ 271 (764)
T TIGR03074 194 GDTLYLCTPHN--KVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDAR 271 (764)
T ss_pred CCEEEEECCCC--eEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCe
Confidence 44666666666 7888888888877776532211 012233321 3457888999999
Q ss_pred EEEEEc-CCCeeeeeece-eEE-------------EEEEcC--CCCEEEEEeC----------CCeEEEEEcCCCccccc
Q psy10566 416 FYQCDI-EGQVLDSWEGV-RVN-------------CLWCRS--DGKSVLAADT----------HHRIRTYNFEHLTDSNL 468 (604)
Q Consensus 416 i~iwd~-~~~~~~~~~~~-~v~-------------~l~~s~--~g~~l~~~~~----------dg~I~i~d~~~~~~~~~ 468 (604)
+.-.|. +|+....+... .+. ...-.| .+..+++++. +|.|+-+|.++++....
T Consensus 272 LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~ 351 (764)
T TIGR03074 272 LIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA 351 (764)
T ss_pred EEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence 998888 57777554321 110 011112 1345666643 68899999999887655
Q ss_pred ccCCCCeeEEEECCCCCEEEEEecCC-eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 469 LQEDHPVMSFTIDATDRLALLNVSTQ-GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l~~~~~dg-~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.....+...- ..+.+.....++.+. ...-+|.+.+....- .+..... ++..+ +.....-..+.|.-.|.+
T Consensus 352 ~~~g~p~~~~-~~~~g~~~~~gg~n~W~~~s~D~~~glvy~p-tGn~~pd------~~g~~-r~~~~n~y~~slvALD~~ 422 (764)
T TIGR03074 352 WDPGNPDPTA-PPAPGETYTRNTPNSWSVASYDEKLGLVYLP-MGNQTPD------QWGGD-RTPADEKYSSSLVALDAT 422 (764)
T ss_pred EecCCCCccc-CCCCCCEeccCCCCccCceEEcCCCCeEEEe-CCCcccc------ccCCc-cccCcccccceEEEEeCC
Confidence 4432111110 011222222122111 233444444322110 1111000 00000 000011124567778888
Q ss_pred CCcceEEeeCCCCCee---------EEEEcC-CCC---cEEEEEeCCCcEEEECCCCCC
Q psy10566 548 RELPIATLSGHTRTVS---------CVAWNP-VYH---QMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V~---------~v~~sp-~~~---~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|+..-.++.....+. =+.+.. + + ..++.++.+|.+.+.|.++++
T Consensus 423 TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~-G~~~~~v~~~~K~G~~~vlDr~tG~ 480 (764)
T TIGR03074 423 TGKERWVFQTVHHDLWDMDVPAQPSLVDLPDAD-GTTVPALVAPTKQGQIYVLDRRTGE 480 (764)
T ss_pred CCceEEEecccCCccccccccCCceEEeeecCC-CcEeeEEEEECCCCEEEEEECCCCC
Confidence 8888776654111111 122222 3 3 378899999999999999887
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=93.73 E-value=2.5 Score=45.57 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=25.8
Q ss_pred CCCCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q psy10566 390 SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI 421 (604)
Q Consensus 390 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 421 (604)
.-...|...+|+.|.+.++....+..|.+++.
T Consensus 110 ~v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k 141 (1243)
T COG5290 110 KVSNGIVAASWSADEKTWCVVTSTREILLFDK 141 (1243)
T ss_pred cccCceEEEeeccCCceEEEEEcCceEEEEec
Confidence 34466889999999998888888888888764
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=93.63 E-value=1.9 Score=45.17 Aligned_cols=125 Identities=14% Similarity=0.210 Sum_probs=74.4
Q ss_pred ccCCCCeeEEEECCCC----CEEEEEecCCeEEEEecCC-----CceeeEeeccccceEEE--EeeeCCCCCcEEEEEeC
Q psy10566 469 LQEDHPVMSFTIDATD----RLALLNVSTQGVHLWDLRD-----RILLRKFQGVTQGQFTI--HSCFGGANQDFVASGSE 537 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~----~~l~~~~~dg~I~lwd~~~-----~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~sgs~ 537 (604)
++.-..|..++|.|-+ ..+++.-....|.+|-+.- ++.+.....+....+.+ .-|.|+|....++.-..
T Consensus 53 iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~ 132 (671)
T PF15390_consen 53 IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA 132 (671)
T ss_pred eeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec
Confidence 3334568888888853 2445555667799998752 23333222222221111 23566788888776665
Q ss_pred CCcEEEEeCCCC--cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 538 DGKVYIWHVKRE--LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 538 dg~I~iwd~~~~--~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
...-.++++... .....+ ...+.|.|.+|.+||.++++..+..=.-+|||-..+..
T Consensus 133 ~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qKtL 190 (671)
T PF15390_consen 133 RDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQKTL 190 (671)
T ss_pred CceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchhhh
Confidence 544445665532 222333 35678999999999666666666655678998776543
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=93.59 E-value=6.8 Score=37.14 Aligned_cols=229 Identities=7% Similarity=-0.034 Sum_probs=139.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS 428 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 428 (604)
.-..++-.|||..-+++...+ .|--.|..+|+....-. +....-..+..-|||..-++-+.. .|.-.|-+.-.+..
T Consensus 63 ap~dvapapdG~VWft~qg~g--aiGhLdP~tGev~~ypL-g~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~ 138 (353)
T COG4257 63 APFDVAPAPDGAVWFTAQGTG--AIGHLDPATGEVETYPL-GSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTR 138 (353)
T ss_pred CccccccCCCCceEEecCccc--cceecCCCCCceEEEec-CCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEE
Confidence 345677788887777766665 68888888887654433 444556777888888776665443 34444443333333
Q ss_pred eec------eeEEEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC
Q psy10566 429 WEG------VRVNCLWCRSDGKSVLAADTH---------HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST 493 (604)
Q Consensus 429 ~~~------~~v~~l~~s~~g~~l~~~~~d---------g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 493 (604)
|.- .......|.+.|+.-+++... +.|++|+... ......++..|+|..-++.-.+
T Consensus 139 f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPq---------G~gpyGi~atpdGsvwyaslag 209 (353)
T COG4257 139 FPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQ---------GGGPYGICATPDGSVWYASLAG 209 (353)
T ss_pred eecccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccCC---------CCCCcceEECCCCcEEEEeccc
Confidence 321 246778899999988877532 3455555432 3456778999999998888888
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc-eEEeeCCCCCeeEEEEcCCCC
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP-IATLSGHTRTVSCVAWNPVYH 572 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~-~~~l~~h~~~V~~v~~sp~~~ 572 (604)
+.|-..|..++. ...+..........+-++.++.|..-++-...+.++.||-....- ...+.+....-.++..... +
T Consensus 210 naiaridp~~~~-aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD~~-g 287 (353)
T COG4257 210 NAIARIDPFAGH-AEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVDRH-G 287 (353)
T ss_pred cceEEcccccCC-cceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeeccC-C
Confidence 889888887763 222322222122334456678888888877788888888764331 2233444444455555544 3
Q ss_pred cEEEEEeCCCcEEEECCCCC
Q psy10566 573 QMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~~ 592 (604)
..-.+--+.|.|.-+|..+.
T Consensus 288 rVW~sea~agai~rfdpeta 307 (353)
T COG4257 288 RVWLSEADAGAIGRFDPETA 307 (353)
T ss_pred cEEeeccccCceeecCcccc
Confidence 44444344455555555543
|
|
| >PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A | Back alignment and domain information |
|---|
Probab=93.47 E-value=13 Score=39.94 Aligned_cols=248 Identities=14% Similarity=0.120 Sum_probs=124.0
Q ss_pred cCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEe
Q psy10566 310 SPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKL 387 (604)
Q Consensus 310 spdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~ 387 (604)
..++..++-+..+|.+..-.+..... ......-+. .....++++..+| .+++.|+..|.+.+..|....-+.+..+
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~--~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~ 296 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGG--SISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSL 296 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEE--EEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCC--eEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEec
Confidence 45677888889999998887762111 111222222 4456677776655 5788888877778888886665666666
Q ss_pred cCCCCCCeEEEEEecC----CC------EEEEEe---cCCeEEEEEcC--CC--eeeeeeceeEEEEEEcCC----CCEE
Q psy10566 388 NHSPEDSLTSCSWNRD----GT------KFVCGG---IRGQFYQCDIE--GQ--VLDSWEGVRVNCLWCRSD----GKSV 446 (604)
Q Consensus 388 ~~~~~~~v~~~~~~~~----~~------~l~s~~---~dg~i~iwd~~--~~--~~~~~~~~~v~~l~~s~~----g~~l 446 (604)
. .-++|.++++.+. .. .+++++ .+|.+++..-. -. ......-..+..++..+. +.++
T Consensus 297 ~--N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~l 374 (504)
T PF10433_consen 297 P--NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYL 374 (504)
T ss_dssp ------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEE
T ss_pred c--CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEE
Confidence 5 4578998888642 11 555554 46788777431 11 222222223555555443 4566
Q ss_pred EEEeCCCeEEEEEcC---CCccc------ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccce
Q psy10566 447 LAADTHHRIRTYNFE---HLTDS------NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~---~~~~~------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~ 517 (604)
+.+..+. -+++.+. ..... .+......+.+-.+. +..++=.+ ...|++.+...++.........+.
T Consensus 375 v~S~~~~-T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt-~~~i~l~~~~~~~~~~~w~~~~~~- 449 (504)
T PF10433_consen 375 VLSFPNE-TRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVT-PKGIRLIDLEDGKLTQEWKPPAGS- 449 (504)
T ss_dssp EEEESSE-EEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEE-SSEEEEEESSSTSEEEEEE-TTS--
T ss_pred EEEcCCc-eEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEe-cCeEEEEECCCCeEEEEEeCCCCC-
Confidence 6665554 3444443 11111 111111222222222 33333332 344888888777666655433221
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee-C----CCCCeeEEEEcC
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS-G----HTRTVSCVAWNP 569 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~-~----h~~~V~~v~~sp 569 (604)
.|..+. -++.+++.+-.++.+..+.+.......... . ....|.|+..+|
T Consensus 450 -~I~~a~--~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 450 -IIVAAS--INDPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp ---SEEE--ESSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred -eEEEEE--ECCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 222222 244567777778889999888765543322 1 357788888776
|
... |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=93.43 E-value=7.7 Score=41.98 Aligned_cols=190 Identities=15% Similarity=0.227 Sum_probs=98.6
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee------ceeEEEEEEcCCCCE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE------GVRVNCLWCRSDGKS 445 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------~~~v~~l~~s~~g~~ 445 (604)
.|+|++.. |.....+.-.|. .+-.+.|+.+ ..+++...+|++.+|++-|..+.... ...|..+.+..+|-.
T Consensus 65 ~I~If~~s-G~lL~~~~w~~~-~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVa 141 (829)
T KOG2280|consen 65 YIRIFNIS-GQLLGRILWKHG-ELIGMGWSDD-EELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVA 141 (829)
T ss_pred eEEEEecc-ccchHHHHhcCC-CeeeecccCC-ceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceE
Confidence 58888874 444444443333 6788999865 56777889999999999776665531 124666666665543
Q ss_pred EEEEeCCCeE-EEEEcCCCccccccc---CCCCeeEEEECCCCC--EEEEE-e-cCCeEEEEecCCCc-eeeEeeccccc
Q psy10566 446 VLAADTHHRI-RTYNFEHLTDSNLLQ---EDHPVMSFTIDATDR--LALLN-V-STQGVHLWDLRDRI-LLRKFQGVTQG 516 (604)
Q Consensus 446 l~~~~~dg~I-~i~d~~~~~~~~~~~---~~~~i~~~~~s~~~~--~l~~~-~-~dg~I~lwd~~~~~-~~~~~~~~~~~ 516 (604)
+++ .+|.+ .+.++.......... ...+-.|-+..+++. .++.. . ..+ ..++-..... ....+...
T Consensus 142 vlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~--- 215 (829)
T KOG2280|consen 142 VLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWP--- 215 (829)
T ss_pred EEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCC---
Confidence 333 34443 344444322222211 111112222222221 11111 0 000 0111111110 01111111
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-CCCeeEEEEcCC
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-TRTVSCVAWNPV 570 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-~~~V~~v~~sp~ 570 (604)
...+.-+..+|+.++|+--.++|.|.+-+++..+....+... ..+.-.++|.-+
T Consensus 216 ~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgn 270 (829)
T KOG2280|consen 216 NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGN 270 (829)
T ss_pred CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecC
Confidence 123333555799999999999999999998887777776522 223336677654
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.046 Score=58.94 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=115.8
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEc---CCCeeeeeec-------e---eEEEEE
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDI---EGQVLDSWEG-------V---RVNCLW 438 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~-------~---~v~~l~ 438 (604)
+++-+..+.-....+..+..+.|-.+.|-. +...+. -.-|...+||+ .|++...+.- . .|...-
T Consensus 113 vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp 190 (1283)
T KOG1916|consen 113 VRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCP 190 (1283)
T ss_pred hhhccCcchhHHHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecc
Confidence 666655443222233345556677777743 222222 23367888987 4554433321 1 233333
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeE-----------EEECCCCCEEEEEecCCeEEEEecC-----
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMS-----------FTIDATDRLALLNVSTQGVHLWDLR----- 502 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~-----------~~~s~~~~~l~~~~~dg~I~lwd~~----- 502 (604)
|.++..++..+..++.|++....+.....+..|...++. -.++|||..++..+.||.++.|.+.
T Consensus 191 ~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~ 270 (1283)
T KOG1916|consen 191 IAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKI 270 (1283)
T ss_pred cccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccc
Confidence 444566777788888888887765433333334333222 2379999999999999998777653
Q ss_pred CCceeeEeeccccceEEEEeeeCC--------CCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCC--
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGG--------ANQDFVASGSE-DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVY-- 571 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~-- 571 (604)
.-.+....+.|..+..... .+.. +.-.+++++++ +..+++|.....+++ +..--..|..|. -+++
T Consensus 271 ~~rclhewkphd~~p~vC~-lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl--l~~~~d~v~iV~-p~~~~v 346 (1283)
T KOG1916|consen 271 VHRCLHEWKPHDKHPRVCW-LCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL--LDKLIDGVQIVG-PHDGEV 346 (1283)
T ss_pred cHhhhhccCCCCCCCceee-eeccccccCCccceeEEEEecccCCcceeEeeccchhhh--hhhcccceEeec-CCCccc
Confidence 3345556666654322221 1111 11135556655 456999998877776 221223333333 1110
Q ss_pred ---------CcEEEEEeCCCcEEEECCC
Q psy10566 572 ---------HQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 572 ---------~~~l~s~s~Dg~I~iW~~~ 590 (604)
-..+++-+-|++|++|.-.
T Consensus 347 ~~~~~~~~~~~~~v~r~v~~~i~~~qn~ 374 (1283)
T KOG1916|consen 347 TDLSMCQWMTTRLVSRSVDGTIKIWQNR 374 (1283)
T ss_pred cchhhhHHHHHHHHHhhhHHHHHHhhcc
Confidence 1124556778889988543
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.65 Score=47.33 Aligned_cols=137 Identities=11% Similarity=0.121 Sum_probs=84.5
Q ss_pred EeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCC-------EEEEEecCCeEEEEecCCCc-eeeE--eeccccceE
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR-------LALLNVSTQGVHLWDLRDRI-LLRK--FQGVTQGQF 518 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~-------~l~~~~~dg~I~lwd~~~~~-~~~~--~~~~~~~~~ 518 (604)
+.....++-.|++.++..........+ -+.|.|+.+ .-++|-++..|.-.|.+-.. .+.. .+.... .+
T Consensus 486 g~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~t-Kn 563 (776)
T COG5167 486 GGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKT-KN 563 (776)
T ss_pred CCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhccc-cc
Confidence 344456667777776666555544444 566776532 34667777778778876432 2221 111111 11
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
...+.. .....|||.||..|-|++||.-.-.....+++-...|..+..+.+|..+||||- .++.+-|+.
T Consensus 564 ~Fss~~-tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk--~yllL~d~~ 632 (776)
T COG5167 564 KFSSGM-TTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK--NYLLLTDVP 632 (776)
T ss_pred cccccc-cccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec--ceEEEEecc
Confidence 122222 234559999999999999997655555567777888999999999666777763 456666554
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=93.21 E-value=10 Score=37.97 Aligned_cols=106 Identities=15% Similarity=0.188 Sum_probs=54.5
Q ss_pred CCCeEEEEeCCC---ceEEEEEECCCceEE---EEecCCCCC-CeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCe
Q psy10566 358 DSSHLLVVGPED---CHELWVWNIETELLR---VKLNHSPED-SLTSCSWNRDGTKFVCGGIR-----GQFYQCDIEGQV 425 (604)
Q Consensus 358 d~~~l~s~~~d~---~~~i~vwd~~~~~~~---~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~ 425 (604)
++..++.+|.++ ...++.+|+.+.... .....-... .-.+++ .-+++..+.|+.. ..+..||+....
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~-~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSAC-YKDGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEE-EECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 455666666543 126788888776531 222111111 111222 2356777777642 357788886443
Q ss_pred eeeeec----eeEEEEEEcCCCCEEEEEeCCC----eEEEEEcCCCc
Q psy10566 426 LDSWEG----VRVNCLWCRSDGKSVLAADTHH----RIRTYNFEHLT 464 (604)
Q Consensus 426 ~~~~~~----~~v~~l~~s~~g~~l~~~~~dg----~I~i~d~~~~~ 464 (604)
...... .+....+...+++..+.|+.++ .+..||..+..
T Consensus 151 W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 151 WFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred eeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 333321 1222333345667777776653 35688887654
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=93.01 E-value=8.8 Score=36.80 Aligned_cols=146 Identities=14% Similarity=0.059 Sum_probs=88.6
Q ss_pred CeEEEEEecCCCEEEEEe---cCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEE-cCCCcccc--
Q psy10566 394 SLTSCSWNRDGTKFVCGG---IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYN-FEHLTDSN-- 467 (604)
Q Consensus 394 ~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d-~~~~~~~~-- 467 (604)
.+.+.+++++++.++... ....++++...+.......+..+..-.|++++...++...+...+++. ........
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~ 104 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE 104 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE
Confidence 588999999999887766 334677776665555544666788889999988777777666666664 22222111
Q ss_pred cc-c-CCCCeeEEEECCCCCEEEEEec---CCeEEEEecC---CCceeeE---eeccccceEEEEeeeCCCCCcEEEEEe
Q psy10566 468 LL-Q-EDHPVMSFTIDATDRLALLNVS---TQGVHLWDLR---DRILLRK---FQGVTQGQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 468 ~~-~-~~~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~---~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~sgs 536 (604)
.- . ....|..+.++|||..++.... ++.|.+--+. .+.+... +.-.......+..+.|.+++.+++.+.
T Consensus 105 v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~ 184 (253)
T PF10647_consen 105 VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGR 184 (253)
T ss_pred ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeC
Confidence 11 1 1228999999999998887763 4667666543 2201111 110111112344456667777777665
Q ss_pred CCC
Q psy10566 537 EDG 539 (604)
Q Consensus 537 ~dg 539 (604)
..+
T Consensus 185 ~~~ 187 (253)
T PF10647_consen 185 SAG 187 (253)
T ss_pred CCC
Confidence 543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=92.96 E-value=13 Score=38.45 Aligned_cols=141 Identities=9% Similarity=0.062 Sum_probs=86.8
Q ss_pred CCeEEEEeCCCceEEEEEECCCceE---EEEecCCCCCCeEEEEEec----CCCEEEEEecCCeEEEEEc---CCC----
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELL---RVKLNHSPEDSLTSCSWNR----DGTKFVCGGIRGQFYQCDI---EGQ---- 424 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~----~~~~l~s~~~dg~i~iwd~---~~~---- 424 (604)
...+++|+..| .+++|+...+.. -..+......+|..+..-+ .....++.-.-..+.+|.+ .|.
T Consensus 37 ~d~IivGS~~G--~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 37 SDKIIVGSYSG--ILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred ccEEEEecccc--EEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccC
Confidence 45888899898 899999865431 1122223456787777543 2223333355667778877 222
Q ss_pred ---eeeeeece----eEEEEEEcC----C-CCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec
Q psy10566 425 ---VLDSWEGV----RVNCLWCRS----D-GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 425 ---~~~~~~~~----~v~~l~~s~----~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
.+...-.| ....+++-| . ...+.+-+.||.+.+|+-+.......+..---...+++.+....+++++.
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASS 194 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecC
Confidence 11222222 122233322 2 35678889999999999887654444444333445788888888999988
Q ss_pred CCeEEEEec
Q psy10566 493 TQGVHLWDL 501 (604)
Q Consensus 493 dg~I~lwd~ 501 (604)
+..+..|..
T Consensus 195 s~~l~~Yky 203 (418)
T PF14727_consen 195 SWTLECYKY 203 (418)
T ss_pred ceeEEEecH
Confidence 888888865
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.92 Score=50.81 Aligned_cols=120 Identities=15% Similarity=0.151 Sum_probs=74.7
Q ss_pred CCCeeEEEECCCCCEEEEEecCC--eEEEEecCCCceee-----Eeec----cccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 472 DHPVMSFTIDATDRLALLNVSTQ--GVHLWDLRDRILLR-----KFQG----VTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~dg--~I~lwd~~~~~~~~-----~~~~----~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
..++..+.+.+|+...++....+ .|..||+++-..-. .+.. ....++.+...+.+.-....+....|+.
T Consensus 100 ~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dls 179 (1405)
T KOG3630|consen 100 EIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLS 179 (1405)
T ss_pred cccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccc
Confidence 45677778888877655554433 69999997642221 1111 1122333332333222334566778999
Q ss_pred EEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 541 VYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
|++..+.-......--.-...+++++|+|. +..++.|-..|++.-|.+.-.
T Consensus 180 l~V~~~~~~~~~v~s~p~t~~~Tav~WSpr-GKQl~iG~nnGt~vQy~P~le 230 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTSFPVTNSQTAVLWSPR-GKQLFIGRNNGTEVQYEPSLE 230 (1405)
T ss_pred hhhhhhhhhhhhhcccCcccceeeEEeccc-cceeeEecCCCeEEEeecccc
Confidence 988877643322221124567899999999 899999999999999987654
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=92.52 E-value=3.1 Score=44.96 Aligned_cols=115 Identities=18% Similarity=0.269 Sum_probs=72.6
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEE--CCCCCeEEEEeCCCceEEEEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW--SPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~--spd~~~l~s~~~d~~~~i~vwd 377 (604)
.-....-+.-|.-++.-++-+....+.|||.. .+..+....+ ...+.|..+.| .|+++.+++.|... .|.+|.
T Consensus 28 ~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~--~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~--~v~l~~ 102 (631)
T PF12234_consen 28 GISNPSLISGSSIKKIAVVDSSRSELTIWDTR--SGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPH--HVLLYT 102 (631)
T ss_pred CCCCcceEeecccCcEEEEECCCCEEEEEEcC--CcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCc--EEEEEE
Confidence 33445555555555544444444579999998 3344444444 35678999999 57899999999988 788875
Q ss_pred CC-----C----ceEEEEe--cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q psy10566 378 IE-----T----ELLRVKL--NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI 421 (604)
Q Consensus 378 ~~-----~----~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 421 (604)
-. + ...+..+ ......+|.+..|.++|..++.++ ..+.++|-
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 32 1 1122222 222336789999999997776554 45666654
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=92.51 E-value=4.2 Score=41.56 Aligned_cols=143 Identities=9% Similarity=0.035 Sum_probs=80.1
Q ss_pred CCeeEEEECCCCCeEEEEeCC----------CceEEEEEECCC--ceE--EEEecCCCCCCeEEEEEecCCCEEEEEecC
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPE----------DCHELWVWNIET--ELL--RVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d----------~~~~i~vwd~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
.....|+|.++|+.+++...+ ....|.+++-.+ |.. ...+.. .-.....+++.+++ ++++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~-~l~~p~Gi~~~~~G--lyV~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAE-ELSMVTGLAVAVGG--VYVATPP 90 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeec-CCCCccceeEecCC--EEEeCCC
Confidence 346788999999877765311 101677776543 221 222221 22346889999988 4444444
Q ss_pred CeEEEEEcCC------Ce---eeeee------ceeEEEEEEcCCCCEEEEEeCC-------------------CeEEEEE
Q psy10566 414 GQFYQCDIEG------QV---LDSWE------GVRVNCLWCRSDGKSVLAADTH-------------------HRIRTYN 459 (604)
Q Consensus 414 g~i~iwd~~~------~~---~~~~~------~~~v~~l~~s~~g~~l~~~~~d-------------------g~I~i~d 459 (604)
...++.|.++ +. +..+. .+....+.+.|||...++.+.. +.|..++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~ 170 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN 170 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence 4333445532 11 11221 2347789999999876655421 4455566
Q ss_pred cCCCcccccccCCCCeeEEEECCCCCEEEEEecC
Q psy10566 460 FEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST 493 (604)
Q Consensus 460 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 493 (604)
..+...............++|+++|+++++-..+
T Consensus 171 pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 171 PDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred cCCCeEEEEecCcCCCccceECCCCCEEEEccCC
Confidence 5554433222223345689999999887665433
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=92.50 E-value=13 Score=37.48 Aligned_cols=190 Identities=9% Similarity=0.076 Sum_probs=89.0
Q ss_pred CCCeEEEEECC-------CeEEEEEeCCCCceeEeeEEeccCCC----CeeEEEECCCCCeEEEEeCCCc---eEEEEEE
Q psy10566 312 DGLKLATGSKD-------TTVIIWDVDPVTFTCQHRKTLEGHTL----GVAYLAWSPDSSHLLVVGPEDC---HELWVWN 377 (604)
Q Consensus 312 dg~~lasgs~d-------g~i~iwd~~~~~~~~~~~~~l~~h~~----~V~~l~~spd~~~l~s~~~d~~---~~i~vwd 377 (604)
++++++.|+.+ ..+.+||.. ...+........... ....+++ +++.++.||.++. ..+.+||
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 107 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFN--THTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYD 107 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECC--CCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEE
Confidence 45666667653 246677766 334433322211000 1222222 4556666665431 2588999
Q ss_pred CCCceEEEEecCC----CCCCeEEEEEecCCCEEEEEecC-----------CeEEEEEcCCCeeeeeece------eEEE
Q psy10566 378 IETELLRVKLNHS----PEDSLTSCSWNRDGTKFVCGGIR-----------GQFYQCDIEGQVLDSWEGV------RVNC 436 (604)
Q Consensus 378 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~------~v~~ 436 (604)
..+.+....-... ........+..-+++.++.|+.+ ..+.+||............ +...
T Consensus 108 ~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~ 187 (341)
T PLN02153 108 TVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGA 187 (341)
T ss_pred CCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcc
Confidence 9876543221100 11111222223356677777754 2467788765443332211 1111
Q ss_pred EEEcCCCCEEEEEeC-------------CCeEEEEEcCCCccccccc----CCCCeeEEEECCCCCEEEEEecC------
Q psy10566 437 LWCRSDGKSVLAADT-------------HHRIRTYNFEHLTDSNLLQ----EDHPVMSFTIDATDRLALLNVST------ 493 (604)
Q Consensus 437 l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d------ 493 (604)
.+..-+++.++.++. ...+.+||..+.+-..... ........+...+++.++.|+..
T Consensus 188 ~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 267 (341)
T PLN02153 188 GFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKG 267 (341)
T ss_pred eEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCcccc
Confidence 112235555555442 1458889987754332211 01111111222356677777641
Q ss_pred --------CeEEEEecCCCc
Q psy10566 494 --------QGVHLWDLRDRI 505 (604)
Q Consensus 494 --------g~I~lwd~~~~~ 505 (604)
+.+..||+.+..
T Consensus 268 ~~~~~~~~n~v~~~d~~~~~ 287 (341)
T PLN02153 268 HLGPGTLSNEGYALDTETLV 287 (341)
T ss_pred ccccccccccEEEEEcCccE
Confidence 257788876653
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=92.47 E-value=7 Score=41.60 Aligned_cols=183 Identities=9% Similarity=-0.016 Sum_probs=85.8
Q ss_pred CCeEEEEeCCC---ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEcCCCeeeeeece-
Q psy10566 359 SSHLLVVGPED---CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDIEGQVLDSWEGV- 432 (604)
Q Consensus 359 ~~~l~s~~~d~---~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~- 432 (604)
+..+++||.++ ...+..||..++.......... .........-++...++||.++ .+..||............
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~-~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~ 350 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNS-PRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLL 350 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCc-hhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCCC
Confidence 44555665432 1257889988876443222111 1111112234677778887643 577788754333322221
Q ss_pred --eEEEEEEcCCCCEEEEEeCCC---eEEEEEcCCCcccccccCCCCe-eEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 433 --RVNCLWCRSDGKSVLAADTHH---RIRTYNFEHLTDSNLLQEDHPV-MSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 433 --~v~~l~~s~~g~~l~~~~~dg---~I~i~d~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
+.......-+|+..+.|+.++ .+..||..+..-........+. ...+..-+++..+.| |.+.+||..+++-
T Consensus 351 ~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ydp~~~~W 427 (480)
T PHA02790 351 KPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RNAEFYCESSNTW 427 (480)
T ss_pred CCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---CceEEecCCCCcE
Confidence 222223344677777776543 4677887664322211111111 111122345555555 3467888876532
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCC
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKR 548 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~ 548 (604)
.. .............+. .++++.+.|+.+ ..|..||..+
T Consensus 428 ~~-~~~m~~~r~~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 428 TL-IDDPIYPRDNPELII--VDNKLLLIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred eE-cCCCCCCccccEEEE--ECCEEEEECCcCCCcccceEEEEECCC
Confidence 21 111111111111122 356777777754 2355555544
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=92.29 E-value=5.7 Score=33.32 Aligned_cols=114 Identities=17% Similarity=0.091 Sum_probs=67.6
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCc----eeEeeEEeccCCCCeeEEEECC-----CCCeEEEEeCCCceEEEEE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTF----TCQHRKTLEGHTLGVAYLAWSP-----DSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~----~~~~~~~l~~h~~~V~~l~~sp-----d~~~l~s~~~d~~~~i~vw 376 (604)
.-.|......|+.++..|+|.|++...... ....+..+. -...|++++-.+ +...|+.|+.. .+..|
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~t---~llaY 78 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQT---SLLAY 78 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEeccc---eEEEE
Confidence 345666666888899999999998652211 111223333 345677776543 34567776666 49999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEec---CCCEEEEEecCCeEEEEEcCCCe
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIEGQV 425 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~ 425 (604)
|+....-+.... -.+.|.++.+-. ...-++..+.+..|.-||.+|..
T Consensus 79 DV~~N~d~Fyke--~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e 128 (136)
T PF14781_consen 79 DVENNSDLFYKE--VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNE 128 (136)
T ss_pred EcccCchhhhhh--CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcE
Confidence 998876443332 335677777643 22334444445566666665543
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=92.27 E-value=14 Score=37.27 Aligned_cols=175 Identities=13% Similarity=0.156 Sum_probs=81.7
Q ss_pred EEEEEECCCceEEEEecCC--CCCCe-EEEEEecCCCEEEEEecC-----CeEEEEEcCCCeeeeeec--------eeEE
Q psy10566 372 ELWVWNIETELLRVKLNHS--PEDSL-TSCSWNRDGTKFVCGGIR-----GQFYQCDIEGQVLDSWEG--------VRVN 435 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~--~~~~v-~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~--------~~v~ 435 (604)
.+++||..+.+........ ..... ...+..-+++.++.|+.+ ..+.+||........... .+..
T Consensus 51 ~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~ 130 (341)
T PLN02153 51 DLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTF 130 (341)
T ss_pred cEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCcee
Confidence 5888888876544322111 11100 111112256677777754 257778886544333221 1222
Q ss_pred EEEEcCCCCEEEEEeCC-----------CeEEEEEcCCCcccccccCC----C-CeeEEEECCCCCEEEEEec-------
Q psy10566 436 CLWCRSDGKSVLAADTH-----------HRIRTYNFEHLTDSNLLQED----H-PVMSFTIDATDRLALLNVS------- 492 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~~d-----------g~I~i~d~~~~~~~~~~~~~----~-~i~~~~~s~~~~~l~~~~~------- 492 (604)
..+...+++.++.|+.+ ..+.+||..+.+-..+.... . .-.+++. -+++..++++.
T Consensus 131 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~g 209 (341)
T PLN02153 131 HSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPG 209 (341)
T ss_pred eEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccC
Confidence 22233456666666643 24778888765322211110 0 1112222 25555555442
Q ss_pred ------CCeEEEEecCCCceeeEee-cc-ccceEEEEeeeCCCCCcEEEEEeCC--------------CcEEEEeCCCC
Q psy10566 493 ------TQGVHLWDLRDRILLRKFQ-GV-TQGQFTIHSCFGGANQDFVASGSED--------------GKVYIWHVKRE 549 (604)
Q Consensus 493 ------dg~I~lwd~~~~~~~~~~~-~~-~~~~~~i~~~~~~~~~~~l~sgs~d--------------g~I~iwd~~~~ 549 (604)
.+.+.+||+.+.+-...-. +. ........++. .++++++.|+.. +.|+.+|..+.
T Consensus 210 G~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~ 286 (341)
T PLN02153 210 GKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAV--VGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL 286 (341)
T ss_pred CccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEE--ECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence 1458889987754322111 10 11111111222 356777777752 25788887654
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=92.01 E-value=12 Score=36.13 Aligned_cols=217 Identities=14% Similarity=0.157 Sum_probs=122.6
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECC------Cc-eEEEEecCC----CCCCeEEEEEecCCC------------E
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIE------TE-LLRVKLNHS----PEDSLTSCSWNRDGT------------K 406 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~------~~-~~~~~~~~~----~~~~v~~~~~~~~~~------------~ 406 (604)
-+.|+++|.+..-++....+ ...+||.. .. .+...+... .....+.+.|+.... .
T Consensus 25 ~WGia~~p~~~~WVadngT~--~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTG--TATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred cceeEecCCCCEEEecCCcc--eEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 46799999987766655555 78999986 12 223333311 224577888875333 3
Q ss_pred EEEEecCCeEEEEEcCC--C----eeeeee----ceeEEEEEEcC--CCCEEEEEe-CCCeEEEEEcCCCcccc---cc-
Q psy10566 407 FVCGGIRGQFYQCDIEG--Q----VLDSWE----GVRVNCLWCRS--DGKSVLAAD-THHRIRTYNFEHLTDSN---LL- 469 (604)
Q Consensus 407 l~s~~~dg~i~iwd~~~--~----~~~~~~----~~~v~~l~~s~--~g~~l~~~~-~dg~I~i~d~~~~~~~~---~~- 469 (604)
|+.++.||+|.-|...- . ....+. +.--+.+++.. .+.+|.++. ..++|.+||-.-.+... ..
T Consensus 103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~D 182 (336)
T TIGR03118 103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFID 182 (336)
T ss_pred EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccC
Confidence 67888999999998521 1 111221 22234444443 355665554 46889999864332111 00
Q ss_pred ---cCC-CC-----------eeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc--ccceEEEE---eeeCCCCC
Q psy10566 470 ---QED-HP-----------VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV--TQGQFTIH---SCFGGANQ 529 (604)
Q Consensus 470 ---~~~-~~-----------i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~--~~~~~~i~---~~~~~~~~ 529 (604)
... .+ |+-..-.++...=+.+..-|.|-+||+. +..++++... -...+.+. ..+....+
T Consensus 183 P~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg 261 (336)
T TIGR03118 183 PALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSG 261 (336)
T ss_pred CCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCC
Confidence 000 01 1111112222222233344679999974 5567666422 12222222 23445667
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeCCC------CCeeEEEEcC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSGHT------RTVSCVAWNP 569 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~------~~V~~v~~sp 569 (604)
.+|+---.||+|..||..+++.+..+.... ...+.++|..
T Consensus 262 ~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 262 ALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 778777779999999999999888876543 3467788854
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=91.89 E-value=16 Score=37.26 Aligned_cols=193 Identities=15% Similarity=0.086 Sum_probs=99.2
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCC-CCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeecee---EE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSP-EDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVR---VN 435 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~---v~ 435 (604)
.+.++..++ .|.-.|..++..+....... ...+.+-.+..+|+ ++.++.+|.++.+|. +|...-...... +.
T Consensus 70 ~v~~~~~~G--~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~ 146 (370)
T COG1520 70 TVYVGTRDG--NIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYA 146 (370)
T ss_pred eEEEecCCC--cEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEe
Confidence 344445666 68888888887554333111 11222222223555 788888898888898 677765554433 22
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCC----CeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeE
Q psy10566 436 CLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH----PVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRK 509 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~ 509 (604)
.-.+..++. +..++.++.+...|..++.......... .+..-.. .....++.+.. ++.+.-.|..+|...-.
T Consensus 147 ~~~v~~~~~-v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~-~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~ 224 (370)
T COG1520 147 SPPVVGDGT-VYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPA-IASGTVYVGSDGYDGILYALNAEDGTLKWS 224 (370)
T ss_pred cCcEEcCcE-EEEecCCCeEEEEEccCCcEEEEEecCCccccccccCce-eecceEEEecCCCcceEEEEEccCCcEeee
Confidence 222222332 3333366777777777665433322211 1111111 22334455544 55677777777766654
Q ss_pred eeccccce-EE---EEeeeCC--CCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC
Q psy10566 510 FQGVTQGQ-FT---IHSCFGG--ANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 510 ~~~~~~~~-~~---i~~~~~~--~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h 558 (604)
........ .. ....... -.+.-++.++.+|.+...|..+++.+..+...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 225 QKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred eeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 32111100 00 0000000 01122356677888888999999888877654
|
|
| >COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.87 E-value=18 Score=38.11 Aligned_cols=268 Identities=13% Similarity=0.056 Sum_probs=135.0
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
..|..+.+...|. +-.|+.|| +..||.. +++....-.... .+|..+.-+-.+ .+.+++.+| +++.+.+.
T Consensus 165 ~~V~aLv~D~~g~-lWvgT~dG-L~~fd~~----~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG---v~~~e~~G 234 (671)
T COG3292 165 TPVVALVFDANGR-LWVGTPDG-LSYFDAG----RGKALQLASPPLDKAINALIADVQG-RLWVGTDQG---VYLQEAEG 234 (671)
T ss_pred ccceeeeeeccCc-EEEecCCc-ceEEccc----cceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc---eEEEchhh
Confidence 4688888888886 44577777 4456654 444333332222 566666655555 466778887 88888776
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee----ec-eeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW----EG-VRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~-~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
.+.......-....|..+.-..+| .+-.|+.+|..+.--.+....... .+ ..|.++....+|. +-+++.++.+
T Consensus 235 ~~~sn~~~~lp~~~I~ll~qD~qG-~lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv 312 (671)
T COG3292 235 WRASNWGPMLPSGNILLLVQDAQG-ELWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIV 312 (671)
T ss_pred ccccccCCCCcchheeeeecccCC-CEEEeecccceeEecCCCCccccccccCCccccccceeeccCCC-EeeeccCceE
Confidence 433332222223334443333333 455566665443222222111111 11 1467777777777 5566666655
Q ss_pred EEEEcCCCcccccccC-CCCeeEEEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 456 RTYNFEHLTDSNLLQE-DHPVMSFTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~~-~~~i~~~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
++-+..-.....+... ...+...+..| .+..+-...+-|.+.+-+-.++..++........ .|....... +..+
T Consensus 313 ~~~~a~w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~--nit~~~~d~-~g~l 389 (671)
T COG3292 313 RYLTADWKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGM--NITTTLEDS-RGRL 389 (671)
T ss_pred EEecchhhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeecccc--ccchhhhcc-CCcE
Confidence 5544321111111111 11111111222 2222333333344555555566666554333322 233233333 4456
Q ss_pred EEEeCCCcEEEEeCCC-CcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 533 ASGSEDGKVYIWHVKR-ELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~-~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
..|+...-+..|+-++ +..+....+ ..+.|..+.=.|+ ++ |..|+.+|.++.
T Consensus 390 Wlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~d-ns-LWIGTs~Glvk~ 443 (671)
T COG3292 390 WLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPD-NS-LWIGTSGGLVKR 443 (671)
T ss_pred EEEecccchhhhccCCcccccccccCCcccceeeeeecCC-CC-EEEeccCCeEec
Confidence 6677765566677666 444444433 2567888888888 45 777888886553
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=91.83 E-value=5.8 Score=40.93 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=19.6
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 395 LTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 395 v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
|..+..++.|..++.+|.+|.+..+
T Consensus 106 V~~vl~s~~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 106 VYQVLLSPTGSHVALIGIKGLMVME 130 (741)
T ss_pred EEEEEecCCCceEEEecCCeeEEEE
Confidence 6677788899999888888866543
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=91.34 E-value=18 Score=41.10 Aligned_cols=117 Identities=15% Similarity=0.195 Sum_probs=75.8
Q ss_pred CcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCC----CceeEeeEEeccC-------CCCeeEEEECCCCCeEEEEeCCC
Q psy10566 302 DEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPV----TFTCQHRKTLEGH-------TLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 302 ~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~----~~~~~~~~~l~~h-------~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.+...++|+|. ...||.....|.-.||++... ...........|+ ...-..|.|.++-..|++++...
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~ 225 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSK 225 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCc
Confidence 36778999984 458999999999999999210 0111111111111 12334789999999999988875
Q ss_pred ceEEEEEECCCceEEE-EecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCC
Q psy10566 370 CHELWVWNIETELLRV-KLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEG 423 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~ 423 (604)
+.++|+++..... .........|..+.-+|+ +..|+. ....|...++..
T Consensus 226 ---l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL--Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 226 ---LMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL--TSKEIIWLDVKS 277 (765)
T ss_pred ---eEEEECCCCCccchhccCCChhheeeEEecCCccceEEEE--ecCeEEEEEccC
Confidence 9999999876533 333345567888888886 333333 235677777743
|
These proteins are found in fungi. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=91.32 E-value=20 Score=37.12 Aligned_cols=141 Identities=17% Similarity=0.182 Sum_probs=88.9
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-------EEEEEecCCeEEEEEc--CCCee
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-------KFVCGGIRGQFYQCDI--EGQVL 426 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~s~~~dg~i~iwd~--~~~~~ 426 (604)
..+...++.-+... ..++-.|++.|+.+-....+ ..| -+.|.|+.+ .-++|-.+..|.-.|. +|..+
T Consensus 476 ~~dssli~~dg~~~-~kLykmDIErGkvveeW~~~--ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi 551 (776)
T COG5167 476 DNDSSLIYLDGGER-DKLYKMDIERGKVVEEWDLK--DDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKI 551 (776)
T ss_pred cCCcceEEecCCCc-ccceeeecccceeeeEeecC--Ccc-eeecCCchhHHhcCccceEEeecccceEEecccccCCce
Confidence 34455555544433 27888899999988777633 233 567777432 2345555666666665 45443
Q ss_pred eeeece------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 427 DSWEGV------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 427 ~~~~~~------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
...... ...+.. .....++++++..|.|++||--.......+ ..+..|..+..+.+|+++++.|. ..+.+.
T Consensus 552 ~v~esKdY~tKn~Fss~~-tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~ 629 (776)
T COG5167 552 KVVESKDYKTKNKFSSGM-TTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLT 629 (776)
T ss_pred eeeeehhccccccccccc-cccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEE
Confidence 322211 122222 234557999999999999997665444433 35778999999999999988775 457777
Q ss_pred ecC
Q psy10566 500 DLR 502 (604)
Q Consensus 500 d~~ 502 (604)
|++
T Consensus 630 d~~ 632 (776)
T COG5167 630 DVP 632 (776)
T ss_pred ecc
Confidence 764
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.71 Score=30.07 Aligned_cols=30 Identities=37% Similarity=0.428 Sum_probs=25.7
Q ss_pred CcEEEEEEcCCC---CeEEEEECCCeEEEEEeC
Q psy10566 302 DEVWFCKFSPDG---LKLATGSKDTTVIIWDVD 331 (604)
Q Consensus 302 ~~V~~v~fspdg---~~lasgs~dg~i~iwd~~ 331 (604)
+.|.+|+|||+. .+|+.+-.-|.|.|+|+.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 578999999854 488888888999999987
|
It contains a characteristic DLL sequence motif. |
| >PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
Probab=90.99 E-value=27 Score=38.02 Aligned_cols=231 Identities=16% Similarity=0.157 Sum_probs=114.0
Q ss_pred EEECCCCCeEEEEeCCCceEEEEEEC-CCceEEEEecCCCCCCeEEEEEecC---CCEEEEEecCC-eEEEEEc--C---
Q psy10566 353 LAWSPDSSHLLVVGPEDCHELWVWNI-ETELLRVKLNHSPEDSLTSCSWNRD---GTKFVCGGIRG-QFYQCDI--E--- 422 (604)
Q Consensus 353 l~~spd~~~l~s~~~d~~~~i~vwd~-~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg-~i~iwd~--~--- 422 (604)
..++|+.+.+-.|=+.. .|--|=+ .+.+.+..+.-.....|.||..... .+..++|-.++ ..++.-+ .
T Consensus 33 ~~~s~~sn~IdiGIS~S--~ISsYIi~PTPKLiwsypi~pt~iV~~~dV~~~~~~~~~~~~glt~rKk~~ll~i~~~~~~ 110 (670)
T PF10395_consen 33 DDFSPDSNQIDIGISGS--AISSYIIKPTPKLIWSYPISPTTIVECCDVLEKSDGKKLYCVGLTERKKFKLLLIERKVGS 110 (670)
T ss_pred cccCCCCceEEEEeccc--hhhheecCCCcceeEeeccCcCceEEEEEeEecCCCcEEEEEEEeeCCeeEEEEEEccCcc
Confidence 35666766655544333 3333333 2455555555556666777776542 23444453443 2333322 1
Q ss_pred -------CCeeeee---eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc--ccc--CCCC------eeEEEECC
Q psy10566 423 -------GQVLDSW---EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN--LLQ--EDHP------VMSFTIDA 482 (604)
Q Consensus 423 -------~~~~~~~---~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~--~~~--~~~~------i~~~~~s~ 482 (604)
+.....+ -..++..+.+.++++.+++...+|.|.+||+....... ... +... |.......
T Consensus 111 ~~~~~~~~e~~~~~~~kl~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~ 190 (670)
T PF10395_consen 111 TEDGTVNSETTNEFELKLDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELEN 190 (670)
T ss_pred ccccccCccccceEEEEcccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhccccccc
Confidence 1111111 13478899999999999999999999999993322111 111 1111 11111111
Q ss_pred CCCEEEEEec-CC---eEEEEecC-CCceeeEeeccccceEE-EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 483 TDRLALLNVS-TQ---GVHLWDLR-DRILLRKFQGVTQGQFT-IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 483 ~~~~l~~~~~-dg---~I~lwd~~-~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
...++++-+. ++ ..+++.+. ....+..+......... -.+.+.-.+|.+..- .+++|.+|++.+.+...++.
T Consensus 191 ~~~~ll~v~~~~~~k~~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l--~~~~i~~ysip~f~~~~tI~ 268 (670)
T PF10395_consen 191 GKDLLLTVSQLSNSKLSYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQL--SKKTISSYSIPNFQIQKTIS 268 (670)
T ss_pred CCceEEEEEEcCCCcEEEEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEE--eCCEEEEEEcCCceEEEEEE
Confidence 2344444444 32 36777771 12222222211110000 011111134544333 67899999998877666654
Q ss_pred CC-------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 557 GH-------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 557 ~h-------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
-. ...|.-.+.+|+ +.|.+. +.+|.+.|+.-
T Consensus 269 l~~ii~~~~~~~vSl~~~s~n--RvLLs~--~nkIyLld~~~ 306 (670)
T PF10395_consen 269 LPSIIDKESDDLVSLKPPSPN--RVLLSV--NNKIYLLDLKF 306 (670)
T ss_pred echhhccccccceEeecCCCC--eEEEEc--CCEEEEEeehh
Confidence 22 122222233443 555543 56799998854
|
It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex []. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=90.98 E-value=0.71 Score=30.08 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=27.7
Q ss_pred CCeeEEEEcCCCC--cEEEEEeCCCcEEEECCCCC
Q psy10566 560 RTVSCVAWNPVYH--QMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 560 ~~V~~v~~sp~~~--~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+.|.++.|+|..+ .+|+.+-.-|.|.|+|+++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 4689999998744 58888888899999999953
|
It contains a characteristic DLL sequence motif. |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=90.94 E-value=16 Score=38.66 Aligned_cols=190 Identities=13% Similarity=0.091 Sum_probs=91.2
Q ss_pred CCCeEEEEeCCC----c-eEEEEEECCCceEEEEecCC-C-C-CCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCC
Q psy10566 358 DSSHLLVVGPED----C-HELWVWNIETELLRVKLNHS-P-E-DSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQ 424 (604)
Q Consensus 358 d~~~l~s~~~d~----~-~~i~vwd~~~~~~~~~~~~~-~-~-~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~ 424 (604)
++..++.++.+. . ..+++||+.+.......... . . .........-++..++.|+.++ .+..||+...
T Consensus 175 ~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~ 254 (470)
T PLN02193 175 GNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTN 254 (470)
T ss_pred CCEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCC
Confidence 344555566431 0 14889999887644321111 0 0 1111112233566777777653 5778888654
Q ss_pred eeeeeece------eEEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCcccccccC----CCC-eeEEEECCCCCEEE
Q psy10566 425 VLDSWEGV------RVNCLWCRSDGKSVLAADTHH-----RIRTYNFEHLTDSNLLQE----DHP-VMSFTIDATDRLAL 488 (604)
Q Consensus 425 ~~~~~~~~------~v~~l~~s~~g~~l~~~~~dg-----~I~i~d~~~~~~~~~~~~----~~~-i~~~~~s~~~~~l~ 488 (604)
........ +....+..-+++.++.|+.++ .+..||+.+.+-...... ... -..++. -+++.++
T Consensus 255 ~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~-~~gkiyv 333 (470)
T PLN02193 255 EWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEV-VQGKVWV 333 (470)
T ss_pred EEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEE-ECCcEEE
Confidence 44332211 111122223556666666543 467788766432211110 001 111222 2566777
Q ss_pred EEecC----CeEEEEecCCCceeeEeec--cccceEEEEeeeCCCCCcEEEEEeCC--------------CcEEEEeCCC
Q psy10566 489 LNVST----QGVHLWDLRDRILLRKFQG--VTQGQFTIHSCFGGANQDFVASGSED--------------GKVYIWHVKR 548 (604)
Q Consensus 489 ~~~~d----g~I~lwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~sgs~d--------------g~I~iwd~~~ 548 (604)
.++.+ ..+.+||+.+.+-...-.. .........++. .++++++.|+.+ +.+.+||..+
T Consensus 334 iGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t 411 (470)
T PLN02193 334 VYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAA--VGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTET 411 (470)
T ss_pred EECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEE--ECCEEEEECCccCCccccccCccceeccEEEEEcCc
Confidence 76654 4589999987643222110 011111111122 356777777753 2478888876
Q ss_pred Cc
Q psy10566 549 EL 550 (604)
Q Consensus 549 ~~ 550 (604)
.+
T Consensus 412 ~~ 413 (470)
T PLN02193 412 LQ 413 (470)
T ss_pred CE
Confidence 54
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=90.92 E-value=9.5 Score=44.23 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=42.0
Q ss_pred CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
..++.+..+..... .+.+...+.+.+|+.........+....... ..++..++++..||.+.+||...++.
T Consensus 198 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 198 EYESLQVLYYSPTK-ILIGFNRGLVVIKDRASKYVQSAYLPNGQLE--------SRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccccceeeeecCCC-cceeeeeeeeeehhcccccchhhcccccccC--------ccCCceEEEEEecCCEEeeecCCCce
Confidence 33444444433333 2334445556666655443333333222211 57889999999999999999998755
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=90.54 E-value=22 Score=36.29 Aligned_cols=149 Identities=8% Similarity=0.075 Sum_probs=86.8
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECC--CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---e
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIE--TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ---V 425 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~ 425 (604)
+.+-|...++.+++....+ +.-|-+. +......+.....++|.++.|++|.+.+++--.+.+|.+++..+. .
T Consensus 26 ngvFfDDaNkqlfavrSgg---atgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l 102 (657)
T KOG2377|consen 26 NGVFFDDANKQLFAVRSGG---ATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQL 102 (657)
T ss_pred cceeeccCcceEEEEecCC---eeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhh
Confidence 3455555555555555444 4444433 233334444456679999999999999999999999999998332 1
Q ss_pred eee----eeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCC--CcccccccCCCCeeEEEECCCCCEEEEEec--CCeEE
Q psy10566 426 LDS----WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEH--LTDSNLLQEDHPVMSFTIDATDRLALLNVS--TQGVH 497 (604)
Q Consensus 426 ~~~----~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~I~ 497 (604)
... .....|....|+.... ++..+..| +.+|-+.. ........+...|.-..|.++.+.++.++. .+++.
T Consensus 103 ~~~~~ck~k~~~IlGF~W~~s~e-~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~ln 180 (657)
T KOG2377|consen 103 EYTQECKTKNANILGFCWTSSTE-IAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLN 180 (657)
T ss_pred HHHHHhccCcceeEEEEEecCee-EEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccc
Confidence 111 1122477778877644 44333333 44554433 223333345667888888888887665554 33333
Q ss_pred EEecCCC
Q psy10566 498 LWDLRDR 504 (604)
Q Consensus 498 lwd~~~~ 504 (604)
=+.++++
T Consensus 181 pf~~~~~ 187 (657)
T KOG2377|consen 181 PFHFRAG 187 (657)
T ss_pred cEEEeec
Confidence 3444433
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=90.51 E-value=23 Score=36.35 Aligned_cols=101 Identities=12% Similarity=0.121 Sum_probs=46.4
Q ss_pred CCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---------ceEEEEEECCCc
Q psy10566 312 DGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---------CHELWVWNIETE 381 (604)
Q Consensus 312 dg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---------~~~i~vwd~~~~ 381 (604)
+++..+.|+ .+..+.++|++.....+..+..+......-.++ ..-++...+.||... ...++.||..+.
T Consensus 38 ~~~iyv~gG~~~~~~~~~d~~~~~~~W~~l~~~p~~~r~~~~~-v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n 116 (376)
T PRK14131 38 NNTVYVGLGSAGTSWYKLDLNAPSKGWTKIAAFPGGPREQAVA-AFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTN 116 (376)
T ss_pred CCEEEEEeCCCCCeEEEEECCCCCCCeEECCcCCCCCcccceE-EEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCC
Confidence 445444444 344566777653223344333332111111112 223466666666432 125888998876
Q ss_pred eEEEEecCCCCCCeEEEEEe-cCCCEEEEEecC
Q psy10566 382 LLRVKLNHSPEDSLTSCSWN-RDGTKFVCGGIR 413 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~~d 413 (604)
.............-...+.. -+++..+.|+.+
T Consensus 117 ~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 117 SWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred EEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 64443211111111112222 477788888754
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.41 E-value=17 Score=34.87 Aligned_cols=189 Identities=10% Similarity=0.070 Sum_probs=103.7
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+-+..+.++.+ +...+..+.-++|.|+.+.+.. ..+..+.- .+--.++. -.|++..++..+. -+-+.|+.+.
T Consensus 87 ~l~~Dv~vse~--yvyvad~ssGL~IvDIS~P~sP-~~~~~lnt-~gyaygv~--vsGn~aYVadldd--gfLivdvsdp 158 (370)
T COG5276 87 DLFADVRVSEE--YVYVADWSSGLRIVDISTPDSP-TLIGFLNT-DGYAYGVY--VSGNYAYVADLDD--GFLIVDVSDP 158 (370)
T ss_pred hhhheeEeccc--EEEEEcCCCceEEEeccCCCCc-ceeccccC-CceEEEEE--ecCCEEEEeeccC--cEEEEECCCC
Confidence 45666777754 5555556667999999844322 22222221 12223333 3477777777444 3777787664
Q ss_pred e---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece-----eEEEEEEcCCCCEEEEEeCCC
Q psy10566 382 L---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV-----RVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 382 ~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~~dg 453 (604)
. ...+.. ........++. .|++-..+..|+-+.+.|+....-..+.++ .+.++..+++..+++. .+.
T Consensus 159 ssP~lagrya-~~~~d~~~v~I--SGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vv--y~e 233 (370)
T COG5276 159 SSPQLAGRYA-LPGGDTHDVAI--SGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVV--YDE 233 (370)
T ss_pred CCceeeeeec-cCCCCceeEEE--ecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEE--ccc
Confidence 3 222322 12222344554 477888888999999999954332222222 4556666655544443 444
Q ss_pred eEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 454 RIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
-+.+-|..+.+....+.. ..++..-.+.-.+++..+...+..+.+.|+.+
T Consensus 234 gvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisn 286 (370)
T COG5276 234 GVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISN 286 (370)
T ss_pred ceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccC
Confidence 567777776654444432 22222223334566666666666666666654
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.68 E-value=5.6 Score=40.24 Aligned_cols=155 Identities=16% Similarity=0.151 Sum_probs=94.5
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc--ccccC-C----CCee-EEEECCCCCEEEEEecCCeEEEE-ecCC
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS--NLLQE-D----HPVM-SFTIDATDRLALLNVSTQGVHLW-DLRD 503 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~--~~~~~-~----~~i~-~~~~s~~~~~l~~~~~dg~I~lw-d~~~ 503 (604)
.+..+...|||+.+..-+. ..+.++++.+.... +.... . +.|+ .+..-..|..++++..||.|.-| |.+.
T Consensus 222 ~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~ 300 (733)
T COG4590 222 DVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRR 300 (733)
T ss_pred chHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeec
Confidence 5777889999998887766 67888888764322 22111 1 1122 22223456778888999988766 5544
Q ss_pred Cce-----eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE
Q psy10566 504 RIL-----LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 504 ~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
+.. ++.++-... .+..+.-..+.+-+++-+.+|++.++.....+++-.-. --..+.-+++||. ..++++-
T Consensus 301 ~~~p~l~h~R~f~l~pa---~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-~~~~~~~~~~Sp~-~~~Ll~e 375 (733)
T COG4590 301 DGQPHLNHIRNFKLAPA---EVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-AYQAPQLVAMSPN-QAYLLSE 375 (733)
T ss_pred CCCCcceeeeccccCcc---cceeeccccccceEEEEcCCCceeeeecccCcceehhh-hhcCcceeeeCcc-cchheee
Confidence 321 222221111 23333333455677888889999988766555443322 2235677899998 6666653
Q ss_pred eCCCcEEEECCCCCCC
Q psy10566 579 SDDCTVRIWGPHLNTN 594 (604)
Q Consensus 579 s~Dg~I~iW~~~~~~~ 594 (604)
+.|.|+++.+++...
T Consensus 376 -~~gki~~~~l~Nr~P 390 (733)
T COG4590 376 -DQGKIRLAQLENRNP 390 (733)
T ss_pred -cCCceEEEEecCCCC
Confidence 467899999887654
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=89.60 E-value=27 Score=35.92 Aligned_cols=271 Identities=10% Similarity=0.030 Sum_probs=128.4
Q ss_pred CCcEEEEEEcC-CC-CeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-----CCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 301 CDEVWFCKFSP-DG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-----TLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 301 ~~~V~~v~fsp-dg-~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-----~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.....+|.|-| |. .-+|+| .+|. |....+...++.... .... .....++.|. + +....++..+ +
T Consensus 87 ~~~L~~V~F~~~d~~~GwAVG-~~G~--IL~T~DGG~tW~~~~-~~~~~~~~~~~~l~~v~f~-~-~~g~~vG~~G---~ 157 (398)
T PLN00033 87 GVVLLDIAFVPDDPTHGFLLG-TRQT--LLETKDGGKTWVPRS-IPSAEDEDFNYRFNSISFK-G-KEGWIIGKPA---I 157 (398)
T ss_pred CCceEEEEeccCCCCEEEEEc-CCCE--EEEEcCCCCCceECc-cCcccccccccceeeeEEE-C-CEEEEEcCce---E
Confidence 45788999954 33 345555 4554 334433333444321 1111 1235677775 3 3355556555 3
Q ss_pred EEEECCCceEEEEecCC--CCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---------------------
Q psy10566 374 WVWNIETELLRVKLNHS--PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--------------------- 430 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------- 430 (604)
.+...+.|+.-...... .......+....++...+ .+..|.|..-+-.|+......
T Consensus 158 il~T~DgG~tW~~~~~~~~~p~~~~~i~~~~~~~~~i-vg~~G~v~~S~D~G~tW~~~~~~t~~~~l~~~~~s~~~g~~~ 236 (398)
T PLN00033 158 LLHTSDGGETWERIPLSPKLPGEPVLIKATGPKSAEM-VTDEGAIYVTSNAGRNWKAAVEETVSATLNRTVSSGISGASY 236 (398)
T ss_pred EEEEcCCCCCceECccccCCCCCceEEEEECCCceEE-EeccceEEEECCCCCCceEcccccccccccccccccccccce
Confidence 33333444432222210 112223333333333333 336666655443343322210
Q ss_pred -ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-ccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee-
Q psy10566 431 -GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT-DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL- 507 (604)
Q Consensus 431 -~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~- 507 (604)
......+..+++|..++++.....++-||-.... ..........+..+.+.+++..++++ ..|.+. +....+..-
T Consensus 237 y~Gsf~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~ 314 (398)
T PLN00033 237 YTGTFSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEE 314 (398)
T ss_pred eccceeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEE-EecCCCCccc
Confidence 0012334566777766665544434444432211 11223345678899999998877766 455543 333333211
Q ss_pred -eEeecc--ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee---CCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 508 -RKFQGV--TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS---GHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 508 -~~~~~~--~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~---~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
..+... ......+..+.+.+++..++ ++.+|.+.... ..|+.-.... .-....+.+.|.++ +..++ .+.+
T Consensus 315 ~~~f~~~~~~~~~~~l~~v~~~~d~~~~a-~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~-~~g~~-~G~~ 390 (398)
T PLN00033 315 DFDFEEADIKSRGFGILDVGYRSKKEAWA-AGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDD-KKGFV-LGND 390 (398)
T ss_pred ccceeecccCCCCcceEEEEEcCCCcEEE-EECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCC-CceEE-EeCC
Confidence 112211 11112333344445665554 45778776653 4455433332 22456889999776 44444 4668
Q ss_pred CcEEEE
Q psy10566 582 CTVRIW 587 (604)
Q Consensus 582 g~I~iW 587 (604)
|.|.-|
T Consensus 391 G~il~~ 396 (398)
T PLN00033 391 GVLLRY 396 (398)
T ss_pred cEEEEe
Confidence 887655
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=89.26 E-value=12 Score=31.44 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=42.8
Q ss_pred ccCCCCeeEEEECC-----CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEE
Q psy10566 469 LQEDHPVMSFTIDA-----TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVY 542 (604)
Q Consensus 469 ~~~~~~i~~~~~s~-----~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~ 542 (604)
+.....|++++-.+ ....|++|+. ..+..||+.....+..-. ...++..+..-.+.. ...++++| .+..|.
T Consensus 44 LNin~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~N~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~ 120 (136)
T PF14781_consen 44 LNINQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVENNSDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQ 120 (136)
T ss_pred EECCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEcccCchhhhhh-CccceeEEEEEecCCCCCcEEEEC-ceEEEE
Confidence 33345666665443 3355666654 569999998765443222 223333433322222 34444444 456677
Q ss_pred EEeCCCCcceEE
Q psy10566 543 IWHVKRELPIAT 554 (604)
Q Consensus 543 iwd~~~~~~~~~ 554 (604)
-||..-.+...+
T Consensus 121 Gfd~~G~e~fWt 132 (136)
T PF14781_consen 121 GFDYEGNEIFWT 132 (136)
T ss_pred EeCCCCcEEEEE
Confidence 777665444433
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=89.20 E-value=17 Score=39.86 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=68.9
Q ss_pred eeEEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC--------------------cccccccCCCCeeEEEEC--CCCCEE
Q psy10566 432 VRVNCLWCRS--DGKSVLAADTHHRIRTYNFEHL--------------------TDSNLLQEDHPVMSFTID--ATDRLA 487 (604)
Q Consensus 432 ~~v~~l~~s~--~g~~l~~~~~dg~I~i~d~~~~--------------------~~~~~~~~~~~i~~~~~s--~~~~~l 487 (604)
|.|+.+.+.. +...|+++..||.|.+|.+++- ++...........+++++ ...+++
T Consensus 101 HtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 101 HTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred ceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEE
Confidence 4444444333 4456777788888888865321 011112235678889998 888899
Q ss_pred EEEecCCeEEEEecCCC--ceee-EeeccccceEEEEeeeCC--CCCc-EEEEEeCCCcEEEEeCC
Q psy10566 488 LLNVSTQGVHLWDLRDR--ILLR-KFQGVTQGQFTIHSCFGG--ANQD-FVASGSEDGKVYIWHVK 547 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~--~~~~-~~~~~~~~~~~i~~~~~~--~~~~-~l~sgs~dg~I~iwd~~ 547 (604)
|+++....|.||-.... +... .-..+...+-.|..+... ++|. .|++++-.|.+.+|++.
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 99999888888765442 1111 101122333345444333 2333 78888999999998883
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=89.17 E-value=38 Score=37.00 Aligned_cols=179 Identities=15% Similarity=0.247 Sum_probs=92.2
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE-e-cCCCCCCeEEEEE
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK-L-NHSPEDSLTSCSW 400 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~-~-~~~~~~~v~~~~~ 400 (604)
-.|+|++.. +..+..+.-....+..+.|+.+.. |++...+| ++.+|++-....... . .......|..+.|
T Consensus 64 ~~I~If~~s-----G~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g--~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~ 135 (829)
T KOG2280|consen 64 PYIRIFNIS-----GQLLGRILWKHGELIGMGWSDDEE-LICVQKDG--TVHVYGLLGEFIESNSVGFESQMSDIVECRF 135 (829)
T ss_pred eeEEEEecc-----ccchHHHHhcCCCeeeecccCCce-EEEEeccc--eEEEeecchhhhcccccccccccCceeEEEE
Confidence 458888874 344444443344788999997764 56667887 899999854332210 1 1112233555555
Q ss_pred ecCCCEEEEEecCCeEEEE-EcCCCeeeeeece-----eEEEEEEcCCCCE---EEEEeCCCeEEEEEcC--CCcccccc
Q psy10566 401 NRDGTKFVCGGIRGQFYQC-DIEGQVLDSWEGV-----RVNCLWCRSDGKS---VLAADTHHRIRTYNFE--HLTDSNLL 469 (604)
Q Consensus 401 ~~~~~~l~s~~~dg~i~iw-d~~~~~~~~~~~~-----~v~~l~~s~~g~~---l~~~~~dg~I~i~d~~--~~~~~~~~ 469 (604)
..+| +++-..+|.+.+- +.+...+...... .-.|-.+.+++.. ++-....-...++-.. ........
T Consensus 136 f~~G--Vavlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~ 213 (829)
T KOG2280|consen 136 FHNG--VAVLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALS 213 (829)
T ss_pred ecCc--eEEEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccC
Confidence 5554 3333344444433 3322222222221 1122222222111 1111000000111111 11111122
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
.....+..+.+||+.++++.-+..|.|.+.+....+....+.
T Consensus 214 ~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 214 WPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred CCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 224678889999999999999999999999888777766665
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=88.85 E-value=2.1 Score=39.99 Aligned_cols=64 Identities=14% Similarity=0.358 Sum_probs=48.2
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCcceEEe-------e-------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 527 ANQDFVASGSEDGKVYIWHVKRELPIATL-------S-------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 527 ~~~~~l~sgs~dg~I~iwd~~~~~~~~~l-------~-------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+++++++-+.+|.+++||+.+++.+..- . .....|..+..+.+ |.-+++-+ +|..+.|+.+-+
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~-G~PiV~ls-ng~~y~y~~~L~ 97 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSN-GVPIVTLS-NGDSYSYSPDLG 97 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCC-CCEEEEEe-CCCEEEeccccc
Confidence 56889999999999999999987654322 1 24567888999977 56666665 577888887654
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=88.79 E-value=28 Score=35.06 Aligned_cols=100 Identities=12% Similarity=0.121 Sum_probs=47.4
Q ss_pred CCCeEEEEECC-CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---------ceEEEEEECCCc
Q psy10566 312 DGLKLATGSKD-TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---------CHELWVWNIETE 381 (604)
Q Consensus 312 dg~~lasgs~d-g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---------~~~i~vwd~~~~ 381 (604)
+++..+.|+.. ..+.++|+++....+..+..+......-.+++ .-+++..+.||... ...+..||..+.
T Consensus 17 ~~~vyv~GG~~~~~~~~~d~~~~~~~W~~l~~~p~~~R~~~~~~-~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~ 95 (346)
T TIGR03547 17 GDKVYVGLGSAGTSWYKLDLKKPSKGWQKIADFPGGPRNQAVAA-AIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKN 95 (346)
T ss_pred CCEEEEEccccCCeeEEEECCCCCCCceECCCCCCCCcccceEE-EECCEEEEEeCCCCCCCCCcceecccEEEEECCCC
Confidence 45555555542 45666666433334444444331111111222 23566777777532 125888998877
Q ss_pred eEEEEecCCCCCCeEE-EEE-ecCCCEEEEEecC
Q psy10566 382 LLRVKLNHSPEDSLTS-CSW-NRDGTKFVCGGIR 413 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~-~~~-~~~~~~l~s~~~d 413 (604)
....... ........ .+. .-+++..+.|+.+
T Consensus 96 ~W~~~~~-~~p~~~~~~~~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 96 SWQKLDT-RSPVGLLGASGFSLHNGQAYFTGGVN 128 (346)
T ss_pred EEecCCC-CCCCcccceeEEEEeCCEEEEEcCcC
Confidence 6443321 11111111 112 3477888888764
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=88.72 E-value=3 Score=38.97 Aligned_cols=63 Identities=13% Similarity=0.128 Sum_probs=39.1
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCcccc-------cc--------cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDSN-------LL--------QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~~-------~~--------~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.+++++++.+.+|.+++||+.+.+... ++ .....|..+.++.+|.-+++ ..+|..+.||..-+
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~-lsng~~y~y~~~L~ 97 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVT-LSNGDSYSYSPDLG 97 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEE-EeCCCEEEeccccc
Confidence 345556666666666666665543211 11 23466888888888876655 45678899987654
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.60 E-value=24 Score=33.97 Aligned_cols=150 Identities=12% Similarity=0.061 Sum_probs=90.0
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL 426 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 426 (604)
.+-+..+.++.+ +...+..+. -+++.|+.+.........-..+ =..-.|.-.|++..++..|.-+.+.|+....-
T Consensus 86 ~~l~~Dv~vse~--yvyvad~ss--GL~IvDIS~P~sP~~~~~lnt~-gyaygv~vsGn~aYVadlddgfLivdvsdpss 160 (370)
T COG5276 86 RDLFADVRVSEE--YVYVADWSS--GLRIVDISTPDSPTLIGFLNTD-GYAYGVYVSGNYAYVADLDDGFLIVDVSDPSS 160 (370)
T ss_pred hhhhheeEeccc--EEEEEcCCC--ceEEEeccCCCCcceeccccCC-ceEEEEEecCCEEEEeeccCcEEEEECCCCCC
Confidence 345666777754 555554443 4999999887654444322221 12333445788998888777788888842211
Q ss_pred e----eee--ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEE
Q psy10566 427 D----SWE--GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVH 497 (604)
Q Consensus 427 ~----~~~--~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~ 497 (604)
. ... +.....++++ |++...+..|+-+.+.|+.......++.+ ...+.++..+++-.+++... ..+.
T Consensus 161 P~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~--egvl 236 (370)
T COG5276 161 PQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVL 236 (370)
T ss_pred ceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc--cceE
Confidence 1 111 1122344444 67778888999999999988776666654 34677777777665555433 3355
Q ss_pred EEecCCCc
Q psy10566 498 LWDLRDRI 505 (604)
Q Consensus 498 lwd~~~~~ 505 (604)
+-|..+.+
T Consensus 237 ivd~s~~s 244 (370)
T COG5276 237 IVDVSGPS 244 (370)
T ss_pred EEecCCCC
Confidence 55554443
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=88.41 E-value=0.26 Score=53.49 Aligned_cols=95 Identities=15% Similarity=0.259 Sum_probs=61.9
Q ss_pred CeEEEEecC--CCceeeE-----eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEE
Q psy10566 494 QGVHLWDLR--DRILLRK-----FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVA 566 (604)
Q Consensus 494 g~I~lwd~~--~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~ 566 (604)
|.+.+||+. .|+.... ..........|.+|.+-++.-++..+-.++.|++.++++... ..+.+|...+..++
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a 231 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMA 231 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHH
Confidence 456777765 2332221 122222233455565567778888888899999887765433 44556877666554
Q ss_pred -----------EcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 567 -----------WNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 567 -----------~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.+|| +..||+++.||.+++|.+-
T Consensus 232 ~~~~g~~~l~~lSpD-Gtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 232 FFAEGVLKLASLSPD-GTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred HHhhchhhheeeCCC-CcEEEEeecCCccceeeee
Confidence 5788 8899999999999888663
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=88.23 E-value=2.9 Score=45.58 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=73.5
Q ss_pred EEEEEEcC--CCCeEEEEECCCeEEEEEeCC-------C--Cc-------eeEeeEEeccCCCCeeEEEEC--CCCCeEE
Q psy10566 304 VWFCKFSP--DGLKLATGSKDTTVIIWDVDP-------V--TF-------TCQHRKTLEGHTLGVAYLAWS--PDSSHLL 363 (604)
Q Consensus 304 V~~v~fsp--dg~~lasgs~dg~i~iwd~~~-------~--~~-------~~~~~~~l~~h~~~V~~l~~s--pd~~~l~ 363 (604)
|+.|.... +...|+.|..||.|.+|.++. . .. ..++...+. -...+++++++ ...++||
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIA 181 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIA 181 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEE
Confidence 44444433 455889999999999997641 0 00 001122222 23578899998 7777777
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCC---C---EEEEEecCCeEEEEEc
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG---T---KFVCGGIRGQFYQCDI 421 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~---~---~l~s~~~dg~i~iwd~ 421 (604)
+++.....+|..+.....+....-...+...|-+++|.++. . .+++++-.|.+.+|++
T Consensus 182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 77777655666666643332222122355668999998743 2 7888999999988877
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=88.16 E-value=5.7 Score=43.10 Aligned_cols=94 Identities=18% Similarity=0.254 Sum_probs=56.3
Q ss_pred EEEEcCCCCeEEEEECCC-----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 306 FCKFSPDGLKLATGSKDT-----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg-----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
.++|-|.|..+||-+.|| .|+.+.-+ .........-.+....+..++|+-....++.+..+ .+.+|-..+
T Consensus 251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErN--GLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n---~~~lwttkN 325 (1243)
T COG5290 251 QLSWKPQGSKYATIGTDGCSTSESVIFFERN--GLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGN---LLKLWTTKN 325 (1243)
T ss_pred ccccccCCceeeeeccCCCCCcceEEEEccC--CcccCCccccCCchhhhhhhhhhHHHHHHHHhhcc---eEEEEEccc
Confidence 478999999999987665 25555543 11110111111233456778888777666665544 699998877
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCC
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGT 405 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~ 405 (604)
-....+... .-..+.-+.|+|...
T Consensus 326 yhWYLK~e~-~ip~~s~vkwhpe~~ 349 (1243)
T COG5290 326 YHWYLKVER-QIPGISYVKWHPEEK 349 (1243)
T ss_pred eEEEEEEee-cCCCcceeeeccccC
Confidence 654444332 223467789999543
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=87.95 E-value=13 Score=38.63 Aligned_cols=28 Identities=29% Similarity=0.464 Sum_probs=21.9
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
-.|..+..++.|..++.+|.+| |.+..+
T Consensus 104 feV~~vl~s~~GS~VaL~G~~G---i~vMeL 131 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKG---LMVMEL 131 (741)
T ss_pred EEEEEEEecCCCceEEEecCCe---eEEEEc
Confidence 4577888899999999999998 444443
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=87.92 E-value=31 Score=34.43 Aligned_cols=95 Identities=11% Similarity=0.097 Sum_probs=48.3
Q ss_pred CCCeEEEEeCCC---ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC----eEEEEEcCCCeeeeee
Q psy10566 358 DSSHLLVVGPED---CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG----QFYQCDIEGQVLDSWE 430 (604)
Q Consensus 358 d~~~l~s~~~d~---~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~ 430 (604)
+++..+.+|..+ ...+..||+.+.+....-...........+..-+++..+.|+.++ .+..||..........
T Consensus 123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~ 202 (323)
T TIGR03548 123 DGTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVA 202 (323)
T ss_pred CCEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEECC
Confidence 456666666421 126889998877643322111111222233344677888887764 3467887654433332
Q ss_pred ce-----eE----EEEEEcCCCCEEEEEeCC
Q psy10566 431 GV-----RV----NCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 431 ~~-----~v----~~l~~s~~g~~l~~~~~d 452 (604)
.. +. .......+++.++.|+.+
T Consensus 203 ~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~ 233 (323)
T TIGR03548 203 DPTTDSEPISLLGAASIKINESLLLCIGGFN 233 (323)
T ss_pred CCCCCCCceeccceeEEEECCCEEEEECCcC
Confidence 11 11 111223356777777765
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=87.90 E-value=40 Score=35.74 Aligned_cols=108 Identities=11% Similarity=0.104 Sum_probs=54.5
Q ss_pred CCCeEEEEeCCC---ceEEEEEECCCceEEEEecCC--CCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeee
Q psy10566 358 DSSHLLVVGPED---CHELWVWNIETELLRVKLNHS--PEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLD 427 (604)
Q Consensus 358 d~~~l~s~~~d~---~~~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~ 427 (604)
++...+.++.++ ...++.||+.+.+........ ........+..-+++.++.|+.++ .+..||+......
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~ 307 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWF 307 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEE
Confidence 455666666542 125889999887654322110 111111122223566777777553 4567777544333
Q ss_pred eeec------eeEEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCcc
Q psy10566 428 SWEG------VRVNCLWCRSDGKSVLAADTH----HRIRTYNFEHLTD 465 (604)
Q Consensus 428 ~~~~------~~v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~~~ 465 (604)
.... .+....+..-+++.++.++.+ ..+.+||..+.+-
T Consensus 308 ~~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W 355 (470)
T PLN02193 308 HCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKW 355 (470)
T ss_pred eCCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEE
Confidence 2211 011111122356666666654 4588999887543
|
|
| >PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins | Back alignment and domain information |
|---|
Probab=87.62 E-value=42 Score=35.65 Aligned_cols=185 Identities=11% Similarity=0.007 Sum_probs=90.1
Q ss_pred CEEEEE---ecCCeEEEEEcCCCeeeeeeceeEEE--EEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCC----Ce
Q psy10566 405 TKFVCG---GIRGQFYQCDIEGQVLDSWEGVRVNC--LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH----PV 475 (604)
Q Consensus 405 ~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~v~~--l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~----~i 475 (604)
-+++.. ...+...++|.+|.....+....... +...++|.+++... ..+..+|+....... ..... --
T Consensus 116 l~~~~~~~~~~~~~~~~iD~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~G~v~~~-~~l~~~~~~~H 192 (477)
T PF05935_consen 116 LYFVNGNDWDSSSYTYLIDNNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLLGKVIWE-YDLPGGYYDFH 192 (477)
T ss_dssp EEEEEETT--BEEEEEEEETTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT--EEEE-EE--TTEE-B-
T ss_pred EEEEeCCCCCCCceEEEECCCccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCCCCEEEe-eecCCcccccc
Confidence 345554 35567888888888766665443333 66788888776555 778888876542211 22111 13
Q ss_pred eEEEECCCCCEEEEEec-------------CCeEEEEecCCCceeeEeeccc------------------------cceE
Q psy10566 476 MSFTIDATDRLALLNVS-------------TQGVHLWDLRDRILLRKFQGVT------------------------QGQF 518 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~-------------dg~I~lwd~~~~~~~~~~~~~~------------------------~~~~ 518 (604)
..+..-|+|++|+.+.. ...|..+| .+|+.+..+.... ..=.
T Consensus 193 HD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~ 271 (477)
T PF05935_consen 193 HDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWL 271 (477)
T ss_dssp S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS-
T ss_pred cccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCcc
Confidence 46677889998888772 22356666 6666555433110 0001
Q ss_pred EEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeE-----EE---------------EcCCCCcEEEE
Q psy10566 519 TIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSC-----VA---------------WNPVYHQMIAS 577 (604)
Q Consensus 519 ~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~-----v~---------------~sp~~~~~l~s 577 (604)
-+.++...+ ++.+++|+-.-..|...|.++++....+..|.+.-.. +. |....++.-+.
T Consensus 272 H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~w~~~~~~~ll~~vd~~G~~~~~~~~~~~~~~gQH~~~ 351 (477)
T PF05935_consen 272 HINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGGWNGTYQDYLLTPVDSNGNPIDCGDGDFDWFWGQHTAH 351 (477)
T ss_dssp -EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT--TTTGGGB-EEB-TTS-B-EBSSSS----SS-EEEE
T ss_pred ccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCCCCcccchheeeeeccCCceeeccCCCCcccccccceE
Confidence 233344334 6677777766678999998899888887665321100 00 11112455566
Q ss_pred EeCCC---cEEEECCCCCC
Q psy10566 578 VSDDC---TVRIWGPHLNT 593 (604)
Q Consensus 578 ~s~Dg---~I~iW~~~~~~ 593 (604)
--.+| .|.++|=...+
T Consensus 352 ~~~~g~~~~l~vFDNg~~r 370 (477)
T PF05935_consen 352 LIPDGPQGNLLVFDNGNGR 370 (477)
T ss_dssp E-TTS---SEEEEE--TTG
T ss_pred EcCCCCeEEEEEEECCCCC
Confidence 66677 88888776554
|
Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=87.37 E-value=0.089 Score=53.11 Aligned_cols=140 Identities=15% Similarity=0.175 Sum_probs=86.6
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEE-EEecCCeEEEEecCCCceeeEeeccccce
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLAL-LNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~I~lwd~~~~~~~~~~~~~~~~~ 517 (604)
+.+.+..++.++.+..+..||-...... ..........++|+.++..++ .+-..+.+++||+.+...-. +.. +..
T Consensus 42 w~~e~~nlavaca~tiv~~YD~agq~~l-e~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq-LE~--gg~ 117 (615)
T KOG2247|consen 42 WRPEGHNLAVACANTIVIYYDKAGQVIL-ELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ-LES--GGT 117 (615)
T ss_pred EecCCCceehhhhhhHHHhhhhhcceec-ccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH-Hhc--cCc
Confidence 3344444555555555666654332111 111233344566666665544 45567889999997643211 111 111
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
..-....|++....++.|...|.+.|++..+.+.+...-.|...+++++|.+. .+.+.++.|..+
T Consensus 118 ~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lE--d~vil~dcd~~L 182 (615)
T KOG2247|consen 118 SSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLE--DYVILCDCDNTL 182 (615)
T ss_pred chHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEeccc--ceeeecCcHHHH
Confidence 12233567788888999989999999999887776666559999999999996 456666666544
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=87.28 E-value=12 Score=34.26 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=34.0
Q ss_pred CeEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEec
Q psy10566 360 SHLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 412 (604)
+.|+.+.... .|.+|++.+.. ....+. .-+.|..+.++..|+++++--.
T Consensus 29 d~Lfva~~g~--~Vev~~l~~~~~~~~~~F~--Tv~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 29 DALFVAASGC--KVEVYDLEQEECPLLCTFS--TVGRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred ceEEEEcCCC--EEEEEEcccCCCceeEEEc--chhheeEEEeccccceEEEEEe
Confidence 3444433333 69999998443 444444 4578999999999999998644
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=87.05 E-value=2.8 Score=48.05 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=28.8
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
+..+|..++++..-..+.+-+..|+|.+||+..
T Consensus 241 ~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 241 SKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 456899999998888899999999999999876
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=86.82 E-value=36 Score=34.05 Aligned_cols=22 Identities=5% Similarity=0.179 Sum_probs=16.7
Q ss_pred CCCCeeEEEECCCCCEEEEEec
Q psy10566 471 EDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
.....-+++++|+|+.|+++..
T Consensus 145 ~N~G~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 145 NNRGFEGLAVSPDGRTLFAAME 166 (326)
T ss_pred CCCCeEEEEECCCCCEEEEEEC
Confidence 3556789999999997766654
|
|
| >smart00667 LisH Lissencephaly type-1-like homology motif | Back alignment and domain information |
|---|
Probab=86.75 E-value=0.19 Score=30.80 Aligned_cols=23 Identities=26% Similarity=0.488 Sum_probs=20.4
Q ss_pred chHHHHHHHHHHHHHhcCCCCCC
Q psy10566 4 TDEDIVRLIGQYLRTIGLDGDSD 26 (604)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~ 26 (604)
..+++.|+|-|||...|+..++.
T Consensus 2 ~~~~l~~lI~~yL~~~g~~~ta~ 24 (34)
T smart00667 2 SRSELNRLILEYLLRNGYEETAE 24 (34)
T ss_pred cHHHHHHHHHHHHHHcCHHHHHH
Confidence 46789999999999999988876
|
Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly. |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=86.50 E-value=26 Score=32.18 Aligned_cols=53 Identities=17% Similarity=0.209 Sum_probs=39.5
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.|..+...+.|.+|++. .........+.. -+.|..+.++..|+++++--.+.
T Consensus 29 d~Lfva~~g~~Vev~~l~--~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~ 81 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLE--QEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEEKN 81 (215)
T ss_pred ceEEEEcCCCEEEEEEcc--cCCCceeEEEcc-hhheeEEEeccccceEEEEEeec
Confidence 344443557789999998 445666677764 47899999999999999976544
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=85.47 E-value=14 Score=42.74 Aligned_cols=139 Identities=11% Similarity=0.161 Sum_probs=78.2
Q ss_pred eCCCeEEEEEcCCCccccccc-CCCCeeEEEE--------CCCCCEEEEEecCCeEEEEecCCCc----e---eeEeecc
Q psy10566 450 DTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTI--------DATDRLALLNVSTQGVHLWDLRDRI----L---LRKFQGV 513 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~--------s~~~~~l~~~~~dg~I~lwd~~~~~----~---~~~~~~~ 513 (604)
+.|..+.+|++++......+. ..+.|..+.+ .|.=+++++-...-.|.++-+.-.+ . ...+.-.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 346678888888754433333 3444544442 2233455555555556665443211 1 1112211
Q ss_pred ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC----CC---c-c----------------eEEee-CCCCCeeEEEEc
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK----RE---L-P----------------IATLS-GHTRTVSCVAWN 568 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~----~~---~-~----------------~~~l~-~h~~~V~~v~~s 568 (604)
..+ ..+.++....+|+.+++| .||. +|.+. .| + + +-.+. .+..+|..++..
T Consensus 176 ~dg-~~V~~I~~t~nGRIF~~G-~dg~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID 251 (1311)
T KOG1900|consen 176 VDG-VSVNCITYTENGRIFFAG-RDGN--LYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITID 251 (1311)
T ss_pred cCC-ceEEEEEeccCCcEEEee-cCCC--EEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEec
Confidence 222 234445556788877776 5554 44431 11 1 0 11223 467799999998
Q ss_pred CCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.. ..++.+-+..|+|.+|++....
T Consensus 252 ~S-R~IlY~lsek~~v~~Y~i~~~G 275 (1311)
T KOG1900|consen 252 NS-RNILYVLSEKGTVSAYDIGGNG 275 (1311)
T ss_pred cc-cceeeeeccCceEEEEEccCCC
Confidence 87 7899999999999999998743
|
|
| >KOG1520|consensus | Back alignment and domain information |
|---|
Probab=85.18 E-value=26 Score=35.08 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=37.6
Q ss_pred EEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
++.+..+|++.-||..+.....++..-.-.+.++.||++.+++++-.
T Consensus 192 ~l~g~~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~Et 238 (376)
T KOG1520|consen 192 ALEGDPTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVAET 238 (376)
T ss_pred eecCCCccceEEecCcccchhhhhhcccccccccCCCCCCEEEEEee
Confidence 34455678899999998887777777777889999999999888754
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=84.60 E-value=51 Score=33.76 Aligned_cols=51 Identities=22% Similarity=0.399 Sum_probs=26.0
Q ss_pred cCCCEEEEEecCC-----------eEEEEEcCCCeeeeeec---eeE-EEEEEc-CCCCEEEEEeCC
Q psy10566 402 RDGTKFVCGGIRG-----------QFYQCDIEGQVLDSWEG---VRV-NCLWCR-SDGKSVLAADTH 452 (604)
Q Consensus 402 ~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~---~~v-~~l~~s-~~g~~l~~~~~d 452 (604)
-++..++.|+... .+..||........... ... ...+.. .+++..+.|+.+
T Consensus 83 ~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 83 IDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred ECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 3566777776532 46677876544433321 111 112222 467777777653
|
|
| >PF09398 FOP_dimer: FOP N terminal dimerisation domain; InterPro: IPR018993 Fibroblast growth factor receptor 1 (FGFR1) oncogene partner (FOP) is a centrosomal protein that is involved in anchoring microtubules to centrosomes | Back alignment and domain information |
|---|
Probab=84.21 E-value=2.5 Score=32.09 Aligned_cols=31 Identities=35% Similarity=0.379 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHhCCccC
Q psy10566 88 DIVRLIGQYLRTIGLDRTADLLMQESGCKLD 118 (604)
Q Consensus 88 e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~ 118 (604)
-+.-||..||+=+||+-|+.+++.|+|..-.
T Consensus 20 Li~eLIrEyLef~~l~~TlsVf~~Es~~~~~ 50 (81)
T PF09398_consen 20 LINELIREYLEFNNLDYTLSVFQPESGQPEE 50 (81)
T ss_dssp HHHHHHHHHHHHTT-HHHHHHHHHHHT-TT-
T ss_pred HHHHHHHHHHHHcCCccHHHHHhhccCCCCC
Confidence 4578999999999999999999999998643
|
This domain includes a Lis-homology motif. It forms an alpha-helical bundle and is involved in dimerisation []. ; GO: 0034453 microtubule anchoring, 0005813 centrosome; PDB: 2D68_A. |
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=83.73 E-value=34 Score=35.72 Aligned_cols=31 Identities=16% Similarity=0.452 Sum_probs=24.4
Q ss_pred CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 560 RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 560 ~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..|.+++..+. .+.+++.+.+|.|.+|++..
T Consensus 190 ~~I~~v~~d~~-r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPS-RRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETT-TTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCC-cCEEEEEeCCCcEEEEEEeC
Confidence 44889999888 68999999999999999976
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=83.37 E-value=0.19 Score=50.86 Aligned_cols=136 Identities=14% Similarity=0.264 Sum_probs=96.5
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEE-EecCCeEEEEEcCCCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC-GGIRGQFYQCDIEGQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~ 428 (604)
.....|-|.+..++.++.+. .+..||-. ++...... ..+....++|..++..++. +-..+.+.+||++.+....
T Consensus 37 pi~~~w~~e~~nlavaca~t--iv~~YD~a-gq~~le~n--~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq 111 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANT--IVIYYDKA-GQVILELN--PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ 111 (615)
T ss_pred cceeeEecCCCceehhhhhh--HHHhhhhh-cceecccC--CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH
Confidence 34556888888888888876 68888854 33333333 3455778899888876544 5667899999996443333
Q ss_pred eec---eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEE
Q psy10566 429 WEG---VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 429 ~~~---~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~ 490 (604)
+.. +.-.-+.|++.+..++.+...|.+.+|+..+.+.....+ |...++++++.+.+..+..+
T Consensus 112 LE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~d 177 (615)
T KOG2247|consen 112 LESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCD 177 (615)
T ss_pred HhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecC
Confidence 221 122236788888889999899999999998877776666 78899999999887655443
|
|
| >smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2 | Back alignment and domain information |
|---|
Probab=83.19 E-value=50 Score=32.61 Aligned_cols=229 Identities=12% Similarity=0.135 Sum_probs=110.2
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE--------
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL-------- 383 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~-------- 383 (604)
++++|+.|+.+|...+ ++.... ....+.+ +...|+++...+.-+.|++-+... ..++++++..-..
T Consensus 12 ~~~~lL~GTe~Gly~~-~~~~~~--~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~-~~L~~~~L~~L~~~~~~~~~~ 85 (302)
T smart00036 12 DGKWLLVGTEEGLYVL-NISDQP--GTLEKLI--GRRSVTQIWVLEENNVLLMISGKK-PQLYSHPLSALVEKKEALGSA 85 (302)
T ss_pred CCcEEEEEeCCceEEE-EcccCC--CCeEEec--CcCceEEEEEEhhhCEEEEEeCCc-ceEEEEEHHHhhhhhhccCCc
Confidence 4468999999985544 454111 2222222 456899999999888877776543 3699999843221
Q ss_pred --------EEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCC-----Ceeee------eeceeEEEEEEcCC-
Q psy10566 384 --------RVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEG-----QVLDS------WEGVRVNCLWCRSD- 442 (604)
Q Consensus 384 --------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~-----~~~~~------~~~~~v~~l~~s~~- 442 (604)
...+ .+......+..... ...++++....+|.++.... ...+. ....++..+..+++
T Consensus 86 ~~~~~~~~~~~~--~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~ 163 (302)
T smart00036 86 RLVIRKNVLTKI--PDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSF 163 (302)
T ss_pred cccccccceEeC--CcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccc
Confidence 1111 23332333333322 22445555566666654321 11221 11123444444443
Q ss_pred -CCEEEEEeCCCeEEEEEcCC--Ccccc------cccCC-CCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-
Q psy10566 443 -GKSVLAADTHHRIRTYNFEH--LTDSN------LLQED-HPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ- 511 (604)
Q Consensus 443 -g~~l~~~~~dg~I~i~d~~~--~~~~~------~~~~~-~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~- 511 (604)
...+..|+..+...++++.. ..... ..... .++..+.+. ++.+++ +..+ ...+.|.......+...
T Consensus 164 ~~~~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~l~-~~e~Ll-c~~~-~~v~Vn~~G~~~~r~~~l 240 (302)
T smart00036 164 ERPGICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQVP-RDEFLL-CYDE-FGVFVNLYGKRRSRNPIL 240 (302)
T ss_pred cceEEEEEEcCCCCeEEEEeecccccccccccccccccccCceEEEEEC-CCeEEE-EECc-EEEEEeCCCCccccceEE
Confidence 55677776653344455432 11000 01111 344444443 344443 3333 34444443212211110
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
........+ ++. ..+++.-+ +..|.|+++.+++.++++..
T Consensus 241 ~w~~~p~~~--~~~---~pyll~~~-~~~ievr~l~~~~l~q~i~~ 280 (302)
T smart00036 241 HWEFMPESF--AYH---SPYLLAFH-DNGIEIRSIKTGELLQELAD 280 (302)
T ss_pred EcCCcccEE--EEE---CCEEEEEc-CCcEEEEECCCCceEEEEec
Confidence 011111122 221 34666665 44599999999998888864
|
Unpublished observations. |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=83.08 E-value=60 Score=33.44 Aligned_cols=144 Identities=10% Similarity=0.005 Sum_probs=68.6
Q ss_pred EEEEecCCCEEEEEecCCeEEEEEcCCC---eeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----ccccc
Q psy10566 397 SCSWNRDGTKFVCGGIRGQFYQCDIEGQ---VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT----DSNLL 469 (604)
Q Consensus 397 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~----~~~~~ 469 (604)
.+..++++..++.+.....++-||--.. .+..-....+..+.+.+++..++++ ..|.+..-+-.... .....
T Consensus 243 ~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~S~d~G~~~~~~~f~~~ 321 (398)
T PLN00033 243 TVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYVSKGTGLTEEDFDFEEA 321 (398)
T ss_pred eEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEEecCCCCcccccceeec
Confidence 3445566655555443333333433221 1122222367888899998877666 44554432222111 11111
Q ss_pred c---CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 470 Q---EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 470 ~---~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
. ....+..+.+.+++..+++| ..|.+... ...++.-........-...+..+.+.++++.+++ +.+|.|.-|
T Consensus 322 ~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G~~G~il~~ 396 (398)
T PLN00033 322 DIKSRGFGILDVGYRSKKEAWAAG-GSGILLRS-TDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-GNDGVLLRY 396 (398)
T ss_pred ccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEe-CCCCcceeEccccCCCCcceeEEEEcCCCceEEE-eCCcEEEEe
Confidence 1 22458889898877765555 55655444 3444443333211111011223343344554444 478877655
|
|
| >PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST) | Back alignment and domain information |
|---|
Probab=82.88 E-value=51 Score=32.48 Aligned_cols=70 Identities=17% Similarity=0.305 Sum_probs=50.6
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC-C----eeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR-T----VSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~-~----V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+.++....+|++|+|.-.-..|.+.|.++|+.+..+.|..+ . -...+|-.+ ..++-.+..+++|.++|-.
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHd-ar~~~~~~~~~~IslFDN~ 220 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHD-ARFLNESNDDGTISLFDNA 220 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccC-CEEeccCCCCCEEEEEcCC
Confidence 44444457889999999999999999999999999977622 1 112444444 5566566778999999874
|
|
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=82.66 E-value=44 Score=34.84 Aligned_cols=31 Identities=23% Similarity=0.488 Sum_probs=25.3
Q ss_pred CCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 473 HPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 473 ~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
..|.++...+..+.+++.+.+|.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3488999999999999999999999999975
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=81.77 E-value=53 Score=31.94 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=27.9
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 410 (604)
|..|++||..+.+....-. +-.+.|+++.|..+.+.++.|
T Consensus 15 C~~lC~yd~~~~qW~~~g~-~i~G~V~~l~~~~~~~Llv~G 54 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGN-GISGTVTDLQWASNNQLLVGG 54 (281)
T ss_pred CCEEEEEECCCCEeecCCC-CceEEEEEEEEecCCEEEEEE
Confidence 4479999988776554333 466789999998665555555
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.66 E-value=4.5 Score=40.90 Aligned_cols=167 Identities=16% Similarity=0.163 Sum_probs=99.6
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE-ecCC-CC---CCeE-EEEEecCCCEEEEEecCC
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK-LNHS-PE---DSLT-SCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~-~~~~-~~---~~v~-~~~~~~~~~~l~s~~~dg 414 (604)
..+..-...|..+-..|||+.+..-+.. ++.++++.+.....+ +... .. ..|+ .+..-..|..+++++.||
T Consensus 214 ~~L~~~~~~v~qllL~Pdg~~LYv~~g~---~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG 290 (733)
T COG4590 214 RLLSVPFSDVSQLLLTPDGKTLYVRTGS---ELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDG 290 (733)
T ss_pred hhcCCCccchHhhEECCCCCEEEEecCC---eEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCC
Confidence 3344555678888999999988887664 588888766543221 1111 11 1122 122233567788999999
Q ss_pred eEEEE-EcC--CC----eeeee--eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCC
Q psy10566 415 QFYQC-DIE--GQ----VLDSW--EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR 485 (604)
Q Consensus 415 ~i~iw-d~~--~~----~~~~~--~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~ 485 (604)
.|.-| |.. +. .++.+ .+..+..+.-..+.+-+++-+.+|++..+.....+..-....-..+.-+++||++.
T Consensus 291 ~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~ 370 (733)
T COG4590 291 LVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQA 370 (733)
T ss_pred ceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccc
Confidence 99887 552 21 11111 11233333333345567777888888877654443332222234667789999999
Q ss_pred EEEEEecCCeEEEEecCCCceeeEee
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
++++- ..|.|+++.+++..+-.++.
T Consensus 371 ~Ll~e-~~gki~~~~l~Nr~Peisws 395 (733)
T COG4590 371 YLLSE-DQGKIRLAQLENRNPEISWS 395 (733)
T ss_pred hheee-cCCceEEEEecCCCCCccHH
Confidence 88865 45679999888765544443
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=81.43 E-value=51 Score=31.51 Aligned_cols=256 Identities=13% Similarity=0.078 Sum_probs=146.7
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
..-..++-+|||..-.++...+.|---|-. +++....--+.......|..-|||..-++-+... |.-.|-++.
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~----tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~a---I~R~dpkt~ 134 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPA----TGEVETYPLGSGASPHGIVVGPDGSAWITDTGLA---IGRLDPKTL 134 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCC----CCceEEEecCCCCCCceEEECCCCCeeEecCcce---eEEecCccc
Confidence 345667888999877777767766666655 3333333334445566777888887766644433 666666665
Q ss_pred eEEEEe-c-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCCCeEE
Q psy10566 382 LLRVKL-N-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTHHRIR 456 (604)
Q Consensus 382 ~~~~~~-~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~dg~I~ 456 (604)
+....- . ...........|.+.|+.-+++.. |.---.|.....++.|. +.....++..|+|..-++.-.+..|-
T Consensus 135 evt~f~lp~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaia 213 (353)
T COG4257 135 EVTRFPLPLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPARNVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIA 213 (353)
T ss_pred ceEEeecccccCCCcccceeeCCCccEEEeecc-ccceecCcccCceeeeccCCCCCCcceEECCCCcEEEEeccccceE
Confidence 433221 1 123345778889999998888763 21112222233333333 33567788999999888877788888
Q ss_pred EEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEe--eccccceEEEEeeeCCCCCcE
Q psy10566 457 TYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKF--QGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 457 i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~ 531 (604)
..|........+... ......+-.+|.+..-++....+.+..||..+.. -..+ .+.....+.+.. ...++.
T Consensus 214 ridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s-W~eypLPgs~arpys~rV---D~~grV 289 (353)
T COG4257 214 RIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS-WIEYPLPGSKARPYSMRV---DRHGRV 289 (353)
T ss_pred EcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc-ceeeeCCCCCCCcceeee---ccCCcE
Confidence 888766543333222 2334556667788887887777888888876543 2222 233333333322 233433
Q ss_pred EEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
-.+--..|.|.-+|-++.+ ...+......+..+...+.
T Consensus 290 W~sea~agai~rfdpeta~-ftv~p~pr~n~gn~ql~gr 327 (353)
T COG4257 290 WLSEADAGAIGRFDPETAR-FTVLPIPRPNSGNIQLDGR 327 (353)
T ss_pred EeeccccCceeecCcccce-EEEecCCCCCCCceeccCC
Confidence 3333345566666665432 3444443333334444443
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=81.07 E-value=8 Score=24.71 Aligned_cols=40 Identities=15% Similarity=-0.018 Sum_probs=27.1
Q ss_pred CCCcEEEEEe-CCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 527 ANQDFVASGS-EDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 527 ~~~~~l~sgs-~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
|++++++++. .++.|.++|..+++.+..+... .....++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg-~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG-GYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC-CCCceEEe
Confidence 4566555544 5789999999998888877653 33345544
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 604 | ||||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 9e-19 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 1e-18 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 2e-18 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 2e-18 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-18 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-18 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 2e-18 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-18 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 2e-18 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 2e-18 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 2e-18 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 2e-18 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 2e-18 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 3e-18 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 4e-18 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 5e-18 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 2e-17 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 3e-17 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-10 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 1e-07 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 2e-06 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 2e-06 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 2e-06 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 3e-06 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 5e-06 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 5e-06 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 8e-06 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 1e-04 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 2e-04 | ||
| 1r5m_A | 425 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-04 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 2e-04 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 3e-04 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 3e-04 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 3e-04 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 4e-04 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 4e-04 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 4e-04 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 4e-04 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 7e-04 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 8e-04 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 9e-04 |
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 4e-40
Identities = 80/327 (24%), Positives = 135/327 (41%), Gaps = 69/327 (21%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L H V KFSP+G LA+ S D + IW + KT+ GH LG++ +A
Sbjct: 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY----DGKFEKTISGHKLGISDVA 72
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-- 411
WS DS+ LV +D L +W++ + + L+ HS + + C++N V G
Sbjct: 73 WSSDSNL-LVSASDDK-TLKIWDVSSGKCLKTLKGHS--NYVFCCNFNPQSNLIVSGSFD 128
Query: 412 --IRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLA------------ADTHHR 454
+R D++ G+ L + V+ + DG ++ +
Sbjct: 129 ESVR----IWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQC 183
Query: 455 IRTYNFEHLTDSNLLQEDHPVMS--F----------TIDATDRLALLNVSTQGVHLWDLR 502
++T + + PV F T+D T + LWD
Sbjct: 184 LKTLIDDD---------NPPVSFVKFSPNGKYILAATLDNT------------LKLWDYS 222
Query: 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV 562
L+ + G ++ I + F ++ SGSED VYIW+++ + + L GHT V
Sbjct: 223 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 282
Query: 563 SCVAWNPVYHQMIASVS--DDCTVRIW 587
A +P +IAS + +D T+++W
Sbjct: 283 ISTACHPT-ENIIASAALENDKTIKLW 308
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 86.7 bits (216), Expect = 8e-19
Identities = 54/293 (18%), Positives = 91/293 (31%), Gaps = 96/293 (32%)
Query: 317 ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376
AT SK T V + TL GHT V+ + +SP+ L D + +W
Sbjct: 1 ATQSKPTPVKPNY--------ALKFTLAGHTKAVSSVKFSPNGEWL-ASSSAD-KLIKIW 50
Query: 377 NIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRV 434
+ + H ++ +W+ D V S + ++
Sbjct: 51 GAYDGKFEKTISGHK--LGISDVAWSSDSNLLVSA-----------------SDDKTLK- 90
Query: 435 NCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ 494
+W D + ++T H + V N + Q
Sbjct: 91 --IW---D------VSSGKCLKTLK-GH---------SNYVFC-----------CNFNPQ 118
Query: 495 G-----------VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQD--FVASG 535
V +WD++ L+ HS F N+D + S
Sbjct: 119 SNLIVSGSFDESVRIWDVKTGKCLKTLPA--------HSDPVSAVHF---NRDGSLIVSS 167
Query: 536 SEDGKVYIWHVKRELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
S DG IW + TL VS V ++P + I + + D T+++W
Sbjct: 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLW 219
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 82.1 bits (204), Expect = 3e-17
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ + L H + V+ C F+P + +GS D +V IWDV T + KTL H+ V+
Sbjct: 98 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK----TGKCLKTLPAHSDPVS 153
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
+ ++ D S L+V D +W+ + + L+ ++ ++ ++ +G +
Sbjct: 154 AVHFNRDGS-LIVSSSYDGL-CRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAA 210
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 48.6 bits (117), Expect = 3e-06
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGS--KDTTVIIWDVD 331
E Q L H D V P +A+ + D T+ +W D
Sbjct: 270 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 2e-36
Identities = 64/298 (21%), Positives = 102/298 (34%), Gaps = 44/298 (14%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ H DEV C FS D +AT S D V IWD T + T + H+ V
Sbjct: 651 LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA----TGKLVHTYDEHSEQVNCCH 706
Query: 355 WSPDSSHLLVV-GPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412
++ S+HLL+ G D L +W++ E H+ +S+ C ++ D
Sbjct: 707 FTNKSNHLLLATGSNDFF-LKLWDLNQKECRNTMFGHT--NSVNHCRFSPDDELLASCSA 763
Query: 413 RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472
G LW I F ++ +
Sbjct: 764 DGTL-------------------RLWDVRSANER------KSINVKRFFLSSEDPPEDVE 798
Query: 473 HPVMS--FTIDATDRLALLNVSTQGVHLWDLRDRILLRK-FQGVTQGQFTIHSCFGGANQ 529
V ++ D ++ + + V L+D+ LL + G TI C
Sbjct: 799 VIVKCCSWSADGD-KIIV--AAKNKVLLFDIHTSGLLAEIHTGHHS---TIQYCDFSPYD 852
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
V +W++ L +A GH V V ++P + SDD T+R+W
Sbjct: 853 HLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP-DGSSFLTASDDQTIRVW 909
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-33
Identities = 50/301 (16%), Positives = 88/301 (29%), Gaps = 66/301 (21%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
++ H + +C FSP V +W++D + GH V
Sbjct: 831 LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID----SRLKVADCRGHLSWVH 886
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+ +SPD S + +D + VW + + E + + T +
Sbjct: 887 GVMFSPDGSS-FLTASDDQT-IRVWETKKVCKNSAIVLKQE---IDVVFQENETMVLAVD 941
Query: 412 IRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
+ GQ+ E +V+C + V D I+
Sbjct: 942 NIRGLQLIAGKTGQIDYLPEA-QVSCCCLSPHLEYVAFGDEDGAIK-------------- 986
Query: 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG----VTQGQFTIHSCFGG 526
+ +L + + G V QFT
Sbjct: 987 ---------------------------IIELPNNRVFSSGVGHKKAVRHIQFT------- 1012
Query: 527 ANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586
A+ + S SED + +W+ + + L H TV + S S D TV++
Sbjct: 1013 ADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRLLQ--DSRLLSWSFDGTVKV 1069
Query: 587 W 587
W
Sbjct: 1070 W 1070
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 6e-33
Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 58/305 (19%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE 344
+ F + D V C +S DG K+ +K+ ++ + +
Sbjct: 782 NVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHT----SGLLAEIHT 837
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRD 403
GH + Y +SP V+ + + +WNI++ L H + ++ D
Sbjct: 838 GHHSTIQYCDFSPYDHL-AVIALSQ-YCVELWNIDSRLKVADCRGHL--SWVHGVMFSPD 893
Query: 404 GTKFVCGGIRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEH 462
G+ F+ + + + + + + + VLA D ++
Sbjct: 894 GSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQ------ 947
Query: 463 LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522
L + + + +
Sbjct: 948 -----------------------------------LIAGKTGQIDYLPEA------QVSC 966
Query: 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582
C + ++VA G EDG + I + ++ GH + V + + + + S S+D
Sbjct: 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD-GKTLISSSEDS 1025
Query: 583 TVRIW 587
+++W
Sbjct: 1026 VIQVW 1030
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 3e-32
Identities = 46/316 (14%), Positives = 94/316 (29%), Gaps = 62/316 (19%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ + F + + + + + + V+
Sbjct: 916 KNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAG-------KTGQIDYLPEAQVSCCC 968
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413
SP ++ G ED + + + + + H ++ + DG +
Sbjct: 969 LSPHLEYV-AFGDED-GAIKIIELPNNRVFSSGVGHK--KAVRHIQFTADGKTLISS--- 1021
Query: 414 GQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472
S + ++ +W G V ++ + DS LL
Sbjct: 1022 --------------SEDSVIQ---VWNWQTGDYVFLQAHQETVKDFRLLQ--DSRLL--- 1059
Query: 473 HPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532
S++ D T V +W++ + R F + SC ++
Sbjct: 1060 ----SWSFDGT------------VKVWNVITGRIERDFTCHQGT---VLSCAISSDATKF 1100
Query: 533 ASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW----G 588
+S S D IW P+ L GH V C A++ ++A+ D+ +RIW G
Sbjct: 1101 SSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSL-DGILLATGDDNGEIRIWNVSDG 1159
Query: 589 PHLNTNKSPHLASSLT 604
L++ +
Sbjct: 1160 QLLHSCAPISVEEGTA 1175
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 9e-29
Identities = 51/307 (16%), Positives = 92/307 (29%), Gaps = 66/307 (21%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
H V +F+ DG L + S+D+ + +W+ T + L+ H V
Sbjct: 994 RVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ----TGDYV-FLQAHQETVK 1048
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
DS L+ D + VWN+ T + R H ++ SC+ + D TKF
Sbjct: 1049 DFRLLQDSR--LLSWSFD-GTVKVWNVITGRIERDFTCHQ--GTVLSCAISSDATKFSST 1103
Query: 411 GIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN 467
+ L +G V C DG + D
Sbjct: 1104 SADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDD---------------- 1147
Query: 468 LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ-FTIHS---- 522
+ + +W++ D LL ++ + H
Sbjct: 1148 -------------NGE------------IRIWNVSDGQLLHSCAPISVEEGTATHGGWVT 1182
Query: 523 --CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580
CF + + S G + W+V T + + + +P + +V +
Sbjct: 1183 DVCFS-PDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSP-DFRTYVTVDN 1238
Query: 581 DCTVRIW 587
+ I
Sbjct: 1239 LGILYIL 1245
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 5e-21
Identities = 42/257 (16%), Positives = 76/257 (29%), Gaps = 52/257 (20%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L H + V + D +L + S D TV +W+V T + + H V A
Sbjct: 1038 VFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVI----TGRIERDFTCHQGTVLSCA 1092
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIR 413
S D++ D +W+ + +L H+ + +++ DG G
Sbjct: 1093 ISSDATKF-SSTSAD-KTAKIWSFDLLSPLHELKGHN--GCVRCSAFSLDGILLATG--- 1145
Query: 414 GQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472
G +R +W SDG+ + +
Sbjct: 1146 --------------DDNGEIR---IWNVSDGQLLHSCAPISVEEG----------TATHG 1178
Query: 473 HPVMS--FTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
V F+ D+ L S G + W++ + F + +
Sbjct: 1179 GWVTDVCFSPDSK-TLV----SAGGYLKWWNVATGDSSQTFYTNGTN---LKKIHVSPDF 1230
Query: 530 DFVASGSEDGKVYIWHV 546
+ G +YI V
Sbjct: 1231 RTYVTVDNLGILYILQV 1247
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 1e-19
Identities = 46/296 (15%), Positives = 89/296 (30%), Gaps = 72/296 (24%)
Query: 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367
+ G T+ R + HT V + +S D +
Sbjct: 586 QEGDTGRLYLEWINKKTIKNLS----------RLVVRPHTDAVYHACFSQDGQR-IASCG 634
Query: 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVL 426
D L V+ ET + + + ED + C+++ D + + D G+++
Sbjct: 635 ADK-TLQVFKAETGEKLLDI-KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692
Query: 427 DSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATD 484
+++ +VNC + +L A T SN D
Sbjct: 693 HTYDEHSEQVNCCHFTNKSNHLLLA--------------TGSN-------------DFF- 724
Query: 485 RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544
+ LWDL + G T ++ C + + +AS S DG + +W
Sbjct: 725 -----------LKLWDLNQKECRNTMFGHTNS---VNHCRFSPDDELLASCSADGTLRLW 770
Query: 545 HVKRELPIATLS-------------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
V+ +++ V C +W+ I + + +
Sbjct: 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADG-DKIIVAAKNKVLLFD 825
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 8e-14
Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 8/96 (8%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL 343
P + H V FSPD L + + W+V T +T
Sbjct: 1161 LLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG--YLKWWNVA----TGDSSQTF 1214
Query: 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379
+ + + SPD V L++ +
Sbjct: 1215 YTNGTNLKKIHVSPDFRT-YVTVDNL-GILYILQVL 1248
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 7/71 (9%)
Query: 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576
Q + + G + + HT V ++ Q IA
Sbjct: 579 QAKLQAKQEGDTGRLYLEWINKKTIKNLS------RLVVRPHTDAVYHACFSQ-DGQRIA 631
Query: 577 SVSDDCTVRIW 587
S D T++++
Sbjct: 632 SCGADKTLQVF 642
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 8e-35
Identities = 43/321 (13%), Positives = 97/321 (30%), Gaps = 44/321 (13%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T++ +H + K SP G A+G V IWD T + T+ + V
Sbjct: 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT--QTTHILKTTIPVFSGPVK 107
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGT-KFVC 409
++W +S + VG V+ +T L + ++ S + + +
Sbjct: 108 DISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA--RAMNSVDFKPSRPFRIIS 165
Query: 410 GG----IRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEH 462
G + + + + ++ V+ + DG + I YN
Sbjct: 166 GSDDNTVA--IF--EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN--- 218
Query: 463 LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-----------VHLWDLRDRILLRKFQ 511
D + + + L S G + +W++ + +
Sbjct: 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278
Query: 512 -----GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVA 566
Q + + S S +G + + + GH + ++ ++
Sbjct: 279 VGTRIEDQQLGII-------WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331
Query: 567 WNPVYHQMIASVSDDCTVRIW 587
+ + + S + + W
Sbjct: 332 SSA-DGKTLFSADAEGHINSW 351
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 6e-30
Identities = 42/308 (13%), Positives = 91/308 (29%), Gaps = 64/308 (20%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ L + F P ++ +GS D TV I++ + + T HT V
Sbjct: 138 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP----PFKFKSTFGEHTKFV 193
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSP-----EDSLTSCSWNRDG 404
+ ++PD S G D + ++N V + S S+ +W+ DG
Sbjct: 194 HSVRYNPDGSLFASTG-GD-GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251
Query: 405 TKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL 463
TK S + ++ +W + T +T
Sbjct: 252 TKIASA-----------------SADKTIK---IW---N------VATLKVEKTIPVGT- 281
Query: 464 TDSNLLQEDHPVMS--FTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521
L ++ + ++ + + + G + I
Sbjct: 282 --------RIEDQQLGIIWTK-QALVSISAN-GFINFVNPELGSIDQVRYGHNKA---IT 328
Query: 522 S-CFGGANQDFVASGSEDGKVYIWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMIASVS 579
+ A+ + S +G + W + + H ++ + + +VS
Sbjct: 329 ALSS-SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS--KGDLFTVS 385
Query: 580 DDCTVRIW 587
D +++
Sbjct: 386 WDDHLKVV 393
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 7e-29
Identities = 45/308 (14%), Positives = 93/308 (30%), Gaps = 31/308 (10%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-------GHT 347
+H V +++PDG A+ D T+++++ E H+
Sbjct: 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV----DGTKTGVFEDDSLKNVAHS 239
Query: 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKF 407
V L WSPD + + D + +WN+ T + +
Sbjct: 240 GSVFGLTWSPDGTK-IASASADKT-IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL 297
Query: 408 VCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464
V G + E G + G + L +DGK++ +AD I +++
Sbjct: 298 VSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357
Query: 465 DSNLLQEDH--PVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFT 519
+ + + H + + L + + + + +
Sbjct: 358 SNRVFPDVHATMITGIKTTSKGDL----FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQ 413
Query: 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS 579
A+ D + + I+ + + SCVA + Q +A
Sbjct: 414 PLGLAVSADGDIAVAAC-YKHIAIYSHGK--LTEVPISY--NSSCVALSND-KQFVAVGG 467
Query: 580 DDCTVRIW 587
D V ++
Sbjct: 468 QDSKVHVY 475
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 8e-25
Identities = 39/300 (13%), Positives = 82/300 (27%), Gaps = 64/300 (21%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS 356
+ H + K + G L T S D + + + + + LA S
Sbjct: 363 PDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAG-GSGVDSSKAVANKLSSQPLGLAVS 420
Query: 357 PDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416
D + V + +++ L V ++++ + + + D G
Sbjct: 421 ADGD-IAVAACYK--HIAIYSHGK-LTEVPISYNS----SCVALSNDKQFVAVG------ 466
Query: 417 YQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPV 475
+ V ++ S H +
Sbjct: 467 -----------GQDSKVH---VYKLSGASVSEVKTIVHP------------------AEI 494
Query: 476 MS--FTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQ 529
S F+ + L +T + V + + + L T + + +
Sbjct: 495 TSVAFSNNGA-FLV----ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWS-PDN 548
Query: 530 DFVASGSEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+A+GS D V +W++ + PI H + I S D ++ W
Sbjct: 549 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFW 607
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-22
Identities = 44/305 (14%), Positives = 86/305 (28%), Gaps = 90/305 (29%)
Query: 309 FSPDG--LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366
+P G ++ G+ TV + + + H+ SP + G
Sbjct: 26 NTPAGDKIQYCNGTSVYTVPVGSLTDT-------EIYTEHSHQTTVAKTSPSGYY-CASG 77
Query: 367 PEDCHELWVWNIET--ELLRVKLN-HSPEDSLTSCSWNRDGTKFV-CGGIRGQFYQC-DI 421
+ +W+ +L+ + S + SW+ + + G R +F
Sbjct: 78 DVH-GNVRIWDTTQTTHILKTTIPVFS--GPVKDISWDSESKRIAAVGEGRERFGHVFLF 134
Query: 422 E-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSF 478
+ G + G +N + + + + S+
Sbjct: 135 DTGTSNGNLTGQARAMNSVDFKPSRPFRII---------------SGSD----------- 168
Query: 479 TIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF---------GGANQ 529
D T V +++ F H+ F G
Sbjct: 169 --DNT------------VAIFEGPPFKFKSTFGE--------HTKFVHSVRYNPDG---- 202
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLS-------GHTRTVSCVAWNPVYHQMIASVSDDC 582
AS DG + +++ H+ +V + W+P IAS S D
Sbjct: 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADK 261
Query: 583 TVRIW 587
T++IW
Sbjct: 262 TIKIW 266
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 5e-17
Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
T+V + S D +A G +D+ V ++ + + H + +
Sbjct: 443 TEVPISY--NSSCVALSNDKQFVAVGGQDSKVHVYKLS--GASVSE-VKTIVHPAEITSV 497
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN----HSPEDSLTSCSWNRDGTKFVC 409
A+S + + LV + ++ +++ N H+ + SW+ D +
Sbjct: 498 AFSNNGAF-LVATDQS-RKVIPYSVANNFELAHTNSWTFHT--AKVACVSWSPDNVRLAT 553
Query: 410 GG 411
G
Sbjct: 554 GS 555
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 9e-16
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
T H +V +SPD ++LATGS D +VI+W+++ + H +
Sbjct: 528 HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN--KPSDHPIIIKGAHAMSSVN 585
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIE 379
+ + ++ G +D + WN+
Sbjct: 586 SVIWLNETTIVSAG-QD-SNIKFWNVP 610
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 2e-13
Identities = 42/256 (16%), Positives = 75/256 (29%), Gaps = 64/256 (25%)
Query: 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW 400
T G + + +P + + + V ++ E+ HS T
Sbjct: 16 TARGTAVVLGN---TPAGDKIQYCNGTSVYTVPVGSLTDTEIYT---EHS--HQTTVAKT 67
Query: 401 NRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYN 459
+ G G G VR +W D I
Sbjct: 68 SPSGYYCASG-----------------DVHGNVR---IW---D------TTQTTHILKTT 98
Query: 460 FEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVS---TQGVHLWDLRDRILLRKFQGVT 514
+ PV + ++ R+A V + H++ G
Sbjct: 99 IPVFSG--------PVKDISWDSESK-RIAA--VGEGRERFGHVFLFDTGTSNGNLTGQA 147
Query: 515 QGQFTIHSC-FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH- 572
+ ++S F + + SGS+D V I+ +T HT+ V V +NP
Sbjct: 148 RA---MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP---D 201
Query: 573 -QMIASVSDDCTVRIW 587
+ AS D T+ ++
Sbjct: 202 GSLFASTGGDGTIVLY 217
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 3e-12
Identities = 30/267 (11%), Positives = 76/267 (28%), Gaps = 69/267 (25%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ V N + S DG +A + + I+ + + + +
Sbjct: 402 SSKAVANKLSSQPLGLAVSADG-DIAVAACYKHIAIYS------HGKLTEVPISYN--SS 452
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+A S D + VG +D ++ V+ + + +TS +++ +G V
Sbjct: 453 CVALSNDKQ-FVAVGGQD-SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVAT- 509
Query: 412 IRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADT---H-HRIRTYNFEHLTDS 466
V + ++ + ++ H ++ ++ D+
Sbjct: 510 ----------------DQSRKVI---PYSVANNFELAHTNSWTFHTAKVACVSWSP--DN 548
Query: 467 NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKF------QGVTQGQFTI 520
L + ++D + V +W++
Sbjct: 549 VRL------ATGSLDNS------------VIVWNMNKPSDHPIIIKGAHAMSSVNSVIW- 589
Query: 521 HSCFGGANQDFVASGSEDGKVYIWHVK 547
N+ + S +D + W+V
Sbjct: 590 ------LNETTIVSAGQDSNIKFWNVP 610
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 4/41 (9%), Positives = 12/41 (29%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
+ H + + + +D+ + W+V
Sbjct: 570 DHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 610
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 3e-33
Identities = 58/308 (18%), Positives = 105/308 (34%), Gaps = 71/308 (23%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ L H V S A+ S D + +WD++ + K+++ +
Sbjct: 70 LDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE----NGKQIKSIDAGPVDA 125
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409
LA+SPDS + L G ++ ++ +E+ + + S +++ DG
Sbjct: 126 WTLAFSPDSQY-LATGTHV-GKVNIFGVESGKKEYSLDTRG--KFILSIAYSPDGKYLAS 181
Query: 410 GGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLTDSN 467
G + +G + ++ + GK + + H IR+ F DS
Sbjct: 182 G-----------------AIDGIIN---IFDIATGKLLHTLEGHAMPIRSLTFSP--DSQ 219
Query: 468 LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS----- 522
LL ++ + D + ++D++ L G H+
Sbjct: 220 LL------VTASDDGY------------IKIYDVQHANLAGTLSG--------HASWVLN 253
Query: 523 -CFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS 579
F D S S D V +W V + T H V V +N I SV
Sbjct: 254 VAF---CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN-GSKIVSVG 309
Query: 580 DDCTVRIW 587
DD + I+
Sbjct: 310 DDQEIHIY 317
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-31
Identities = 62/303 (20%), Positives = 105/303 (34%), Gaps = 63/303 (20%)
Query: 295 QVLNDHCDEVWFCKFSP----DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ H D +W + + + TGS D V +W + +LEGH LGV
Sbjct: 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWR--DERLDLQWSLEGHQLGV 83
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409
+ S D H + +W++E + ++ + +++ D
Sbjct: 84 VSVDISHTLPI-AASSSLDAH-IRLWDLENGKQIKSIDAGP--VDAWTLAFSPDSQYLAT 139
Query: 410 GGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLTDSN 467
G + G V ++ GK + DT I + + D
Sbjct: 140 G-----------------THVGKVN---IFGVESGKKEYSLDTRGKFILSIAYSP--DGK 177
Query: 468 LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFGG 526
L S ID ++++D+ LL +G I S F
Sbjct: 178 YL------ASGAIDGI------------INIFDIATGKLLHTLEG---HAMPIRSLTF-- 214
Query: 527 ANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584
+ D + + S+DG + I+ V+ TLSGH V VA+ P S S D +V
Sbjct: 215 -SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTHFVSSSSDKSV 272
Query: 585 RIW 587
++W
Sbjct: 273 KVW 275
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 97.9 bits (245), Expect = 2e-22
Identities = 46/283 (16%), Positives = 88/283 (31%), Gaps = 65/283 (22%)
Query: 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH---LLVVGPEDCHE 372
S++ K + H + +AW + +V G D
Sbjct: 5 HHHSSRENLYFQGTNQ----YGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDL- 59
Query: 373 LWVWNIETELLRVKLN---HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW 429
+ VW E L ++ + H + S + S
Sbjct: 60 VKVWKWRDERLDLQWSLEGHQ--LGVVSVDISHTLPIAASS-----------------SL 100
Query: 430 EG-VRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA 487
+ +R LW +GK + + D T F DS L + T +
Sbjct: 101 DAHIR---LWDLENGKQIKSIDAGPVDAWTLAFSP--DSQYL------ATGTHVGKVNI- 148
Query: 488 LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQD--FVASGSEDGKVYIW 544
+ + + I S + + D ++ASG+ DG + I+
Sbjct: 149 -----------FGVESGKKEYSLDTRGKF---ILSIAY---SPDGKYLASGAIDGIINIF 191
Query: 545 HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + TL GH + + ++P Q++ + SDD ++I+
Sbjct: 192 DIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIY 233
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 76.7 bits (190), Expect = 2e-15
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L+ H V F PD + S D +V +WDV T T H V +
Sbjct: 242 GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG----TRTCVHTFFDHQDQVWGVK 297
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIE 379
++ + S +V +D E+ +++
Sbjct: 298 YNGNGSK-IVSVGDD-QEIHIYDCP 320
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 7e-33
Identities = 36/306 (11%), Positives = 92/306 (30%), Gaps = 58/306 (18%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
D + G+ + + + D + R+ + H + L + P
Sbjct: 96 RADYTAVDTAKLQMRRFILGTTEGDIKVLDSN----FNLQREIDQAHVSEITKLKFFPSG 151
Query: 360 SHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ 418
L+ +D +L +W+++ R + H ++T + G +
Sbjct: 152 EA-LISSSQD-MQLKIWSVKDGSNPRTLIGHR--ATVTDIAIIDRGRNVLSA-------- 199
Query: 419 CDIEGQVLDSWEG-VRVNCLWCRSDGKSV--LAADTHHRIRTYNFEHLTDSNLLQEDHPV 475
S +G +R LW G ++ + + + D +
Sbjct: 200 ---------SLDGTIR---LWECGTGTTIHTFNRKENPHDGVNSIALFVGT-----DRQL 242
Query: 476 MSFTIDATDRLALLNVSTQG-----------VHLWDLRDRILLRK-FQGVTQGQFTIHSC 523
+ + L T G + + ++ + + T ++
Sbjct: 243 HEISTSKKNNLE---FGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSL--T 297
Query: 524 FGGANQDFVASGSEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581
G N +++ +G E+G + W ++ L ++ V + + S D
Sbjct: 298 VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAA--GALFVSSGFD 355
Query: 582 CTVRIW 587
++++
Sbjct: 356 TSIKLD 361
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 15/130 (11%), Positives = 39/130 (30%), Gaps = 20/130 (15%)
Query: 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQH-RKTLEGHT 347
F Q+ + +F G + G + + +V + + + T
Sbjct: 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF----SKEQTIQLPSKFT 290
Query: 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNH----------SPEDSL 395
L ++++ + G E+ L W++ + + L + +
Sbjct: 291 CSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPECPVGEFLINEGTPINNVYFAAGALF 349
Query: 396 TSCSWNRDGT 405
S + D +
Sbjct: 350 VSSGF--DTS 357
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 6e-11
Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 9/118 (7%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWD-VDP-VTFTCQHRKTLEGHTLGVAYL--- 353
+ D + + + + VD + +H+ + G++ GV
Sbjct: 3 HMTKTITVAHIQYDFKAVLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGN 62
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+ SH L D H +++N L + D + +F+ G
Sbjct: 63 TFEKVGSH-LYKARLDGH-DFLFNTIIRDGSKMLKRA--DYTAVDTAKLQMRRFILGT 116
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 3/56 (5%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ DG ++++ L + + + + +++
Sbjct: 71 LYKARLDGHDFLFNTIIRDGSKML-KRADYTAVDTAKL-QMRRFILGTTEGDIKVL 124
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 17/313 (5%), Positives = 49/313 (15%), Gaps = 75/313 (23%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ D K K T I+ ++ + + L+ + +
Sbjct: 19 IQMMLAADVHLGTKNCDFQ-MERYVYKRRTDGIYIIN----LGKTWEKLQLAARVIVAIE 73
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-- 411
D P + + + H+ + ++
Sbjct: 74 NPQDIIV-QSARPYG-QRAVLKFAQYTGAHAIAGRHT--PGTFTNQLQTSFSEPRLLILT 129
Query: 412 --IR------GQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFE 461
+ +R + ++ K +
Sbjct: 130 DPRTDHQPIKES--ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQS------------- 174
Query: 462 HLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521
+ L+ R + +
Sbjct: 175 --IGCL-------------FWL------------LARMVLQMRGTILPGHK---WDVMVD 204
Query: 522 S------CFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQM 574
++ A+ + T + A P
Sbjct: 205 LFFYRDPEEAKEQEEEEAALVAPDYGAVAEYAAPAADTWGGEWGTDAAAQPAAIPA-QAG 263
Query: 575 IASVSDDCTVRIW 587
+
Sbjct: 264 ADWTAAPAPAAGG 276
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 2e-16
Identities = 0/297 (0%), Positives = 0/297 (0%), Gaps = 68/297 (22%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD---PVTFTCQHRKTLEGHTLGVA 351
+ H + + + + +
Sbjct: 102 AIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYV 161
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP----EDSLTSCSWN-RDGTK 406
+ ++ +G L ++ + + +
Sbjct: 162 DIGIPANNKGKQSIGCLFWL-LARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKEQEEE 220
Query: 407 FVCGGIRGQFYQCD---------IEGQVLDSWEG--VRVNCLWCRSDGKSVLA------- 448
E
Sbjct: 221 EAALV-------APDYGAVAEYAAPAADTWGGEWGTDAAAQPAAIPAQAG-ADWTAAPAP 272
Query: 449 -----ADTHHRIRTYNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVST---QGVHL 498
+ + +
Sbjct: 273 AAGGWDTAAAPAPGWEQG---SAPVPAAAPTPNWGE----- 324
Query: 499 WDLRDRILLRKFQGVTQGQFTIHS------CFGGANQD--FVASGSEDGKVYIWHVK 547
Sbjct: 325 ------- 374
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-32
Identities = 61/298 (20%), Positives = 99/298 (33%), Gaps = 54/298 (18%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ V C ++P G +A G D I+++ + + L GHT ++
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413
+ D+ +V D +W+IET + H+ + S S D FV G
Sbjct: 151 FLDDNQ--IVTSSGD-TTCALWDIETGQQTTTFTGHT--GDVMSLSLAPDTRLFVSGA-- 203
Query: 414 GQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLTDSNLLQED 472
CD LW +G H I F + N
Sbjct: 204 -----CD------------ASAKLWDVREGMCRQTFTGHESDINAICFFP--NGNAF--- 241
Query: 473 HPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQD- 530
+ + DAT RL +DLR L + I S F ++
Sbjct: 242 ---ATGSDDATCRL------------FDLRADQELMTYSH-DNIICGITSVSF---SKSG 282
Query: 531 -FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ +G +D +W + L+GH VSC+ +A+ S D ++IW
Sbjct: 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIW 339
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 89.5 bits (223), Expect = 1e-19
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ T H +V +PD +G+ D + +WDV R+T GH +
Sbjct: 175 QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTGHESDIN 230
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
+ + P+ + G +D ++++ + L + + +TS S+++ G + G
Sbjct: 231 AICFFPNGNA-FATGSDD-ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 7e-18
Identities = 53/273 (19%), Positives = 88/273 (32%), Gaps = 77/273 (28%)
Query: 288 EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT 347
E ++ L H + C+F D ++ T S DTT +WD++ T Q T GHT
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIE----TGQQTTTFTGHT 184
Query: 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTK 406
V L+ +PD+ V G D +W++ + R H + + + +G
Sbjct: 185 GDVMSLSLAPDTRL-FVSGACD-ASAKLWDVREGMCRQTFTGHE--SDINAICFFPNGNA 240
Query: 407 FVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465
F G S + R L+ D + TY+ +++
Sbjct: 241 FATG-----------------SDDATCR---LF---D------LRADQELMTYSHDNIIC 271
Query: 466 SNLLQEDHPVMS--FTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTI 520
+ S F+ L + ++WD G
Sbjct: 272 G--------ITSVSFSKSGR-LLL----AGYDDFNCNVWDALKADRAGVLAG-------- 310
Query: 521 HS------CFGGANQD--FVASGSEDGKVYIWH 545
H D VA+GS D + IW+
Sbjct: 311 HDNRVSCLGV---TDDGMAVATGSWDSFLKIWN 340
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 7e-17
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T + L H +++ + D L + S+D +IIWD T + + V
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY----TTNKVHAIPLRSSWVM 101
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-----HSPEDSLTSCSWNRDGT 405
A++P ++ + G D + ++N++T V+++ H+ L+ C + D
Sbjct: 102 TCAYAPSGNY-VACGGLD-NICSIYNLKTREGNVRVSRELAGHT--GYLSCCRFLDDNQ 156
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 4e-13
Identities = 41/269 (15%), Positives = 76/269 (28%), Gaps = 43/269 (15%)
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTS 397
Q + L+ S + V I+ R H + +
Sbjct: 9 QEAEQLKNQIRDARKACADATLSQITNNIDP------VGRIQMRTRRTLRGHL--AKIYA 60
Query: 398 CSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHR 454
W D + G+ D + + V G V +
Sbjct: 61 MHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 455 IRTYNFEHLTDSNLLQE-----DHPVMS--FTIDATDRLALLNVSTQG---VHLWDLRDR 504
YN + + + + F D +++ V++ G LWD+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--NQI----VTSSGDTTCALWDIETG 174
Query: 505 ILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558
F G H+ + SG+ D +W V+ + T +GH
Sbjct: 175 QQTTTFTG--------HTGDVMSLSLA-PDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 559 TRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
++ + + P A+ SDD T R++
Sbjct: 226 ESDINAICFFPNG-NAFATGSDDATCRLF 253
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 3e-32
Identities = 50/326 (15%), Positives = 100/326 (30%), Gaps = 84/326 (25%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L+ H +W TGS D ++ +WDV Q T + V +
Sbjct: 68 GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS----NGQCVATWKSPV-PVKRVE 122
Query: 355 WSPDSSHLLVVGPEDCHELW----VWNIET------------ELLRVKLNHSPEDSLTSC 398
+SP ++ + ++ + ++ IE E + + H D+ T
Sbjct: 123 FSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181
Query: 399 SWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRT 457
W+ G + G +G + + S+ + + H
Sbjct: 182 GWSTKGKYIIAG-----------------HKDGKIS---KYDVSNNYEYVDSIDLH---- 217
Query: 458 YNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQG 512
+ + F+ D T ++ L D+ +L+K++
Sbjct: 218 --------------EKSISDMQFSPDLT-YFI----TSSRDTNSFLVDVSTLQVLKKYET 258
Query: 513 VTQ---------GQFTIHSCFGGANQDF--VASGSEDGKVYIWHVKRELPIATLSGHTRT 561
+F I G +D ++ + +H E I + GH
Sbjct: 259 DCPLNTAVITPLKEF-IILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGP 317
Query: 562 VSCVAWNPVYHQMIASVSDDCTVRIW 587
++ VA +P AS +D +R+
Sbjct: 318 LNTVAISPQ-GTSYASGGEDGFIRLH 342
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-29
Identities = 30/321 (9%), Positives = 79/321 (24%), Gaps = 62/321 (19%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
L H + K++ +G L + SKD++ +W + TL+GHT + +
Sbjct: 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL----NGERLGTLDGHTGTIWSI 80
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413
+ + V G D + +W++ + ++ G F+
Sbjct: 81 DVDCFTKY-CVTGSADYS-IKLWDVSNGQCVATWKS--PVPVKRVEFSPCGNYFLAILDN 136
Query: 414 GQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH 473
I ++ + + +
Sbjct: 137 VMKNPGSI--------------NIYEIERDSATHELTKVSEEPIHKIITHEGLD------ 176
Query: 474 PVMSFTIDATDRLALLNVST---QGVHLWDLRD-RILLRKFQG----VTQGQFTIHSCFG 525
+ ++ + +D+ + + ++ QF+
Sbjct: 177 AATVAGWSTKGKYI---IAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS------ 227
Query: 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP-------------VYH 572
+ + + S D ++ V + ++ P
Sbjct: 228 -PDLTYFITSSRDTNSFLVDVSTLQVLKKYETDC-PLNTAVITPLKEFIILGGGQEAKDV 285
Query: 573 QMIASVSDDCTVRIWGPHLNT 593
++ R + H
Sbjct: 286 TTTSANEGKFEARFY--HKIF 304
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-26
Identities = 35/288 (12%), Positives = 88/288 (30%), Gaps = 57/288 (19%)
Query: 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372
G + ++ + L GH + + ++ + LL +D
Sbjct: 2 GSSHHHHHHSSGENLYFQG----SHMKAIKLTGHERPLTQVKYNKEGD-LLFSCSKDSS- 55
Query: 373 LWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG 431
VW E L H+ ++ S + V G S +
Sbjct: 56 ASVWYSLNGERLGTLDGHT--GTIWSIDVDCFTKYCVTG-----------------SADY 96
Query: 432 -VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN 490
++ LW S+G+ V + ++ F N ++ +
Sbjct: 97 SIK---LWDVSNGQCVATWKSPVPVKRVEFSP--CGNYF------LAILDNVMK------ 139
Query: 491 VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ----------DFVASGSEDGK 540
+ ++++++ + V++ G + ++ +G +DGK
Sbjct: 140 -NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGK 198
Query: 541 VYIWHVK-RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + V + ++ H +++S + ++P + S D +
Sbjct: 199 ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL-TYFITSSRDTNSFLV 245
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 5e-18
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 20/133 (15%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
E ++ H + +FSPD T S+DT + DV T Q K E +
Sbjct: 209 EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS----TLQVLKKYETDC-PLN 263
Query: 352 YLAWSPDSSHLLVVGPEDCHELW------------VWNIETELLRVKLN-HSPEDSLTSC 398
+P +++ G ++ ++ ++ E ++ H L +
Sbjct: 264 TAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF--GPLNTV 321
Query: 399 SWNRDGTKFVCGG 411
+ + GT + GG
Sbjct: 322 AISPQGTSYASGG 334
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 3e-14
Identities = 22/158 (13%), Positives = 57/158 (36%), Gaps = 16/158 (10%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT-CQHRKTLEGHTLG 349
+ ++ D +S G + G KD + +DV ++ +++ H
Sbjct: 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVS----NNYEYVDSIDLHEKS 220
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFV 408
++ + +SPD ++ + D + ++ ++ T ++L+ P L + +
Sbjct: 221 ISDMQFSPDLTY-FITSSRDTN-SFLVDVSTLQVLKKYETDCP---LNTAVITPLKEFII 275
Query: 409 CGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSV 446
GG Q + + EG + + + +
Sbjct: 276 LGG-----GQEAKDVTTTSANEGKFEARFYHKIFEEEI 308
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 10/66 (15%), Positives = 19/66 (28%), Gaps = 9/66 (13%)
Query: 282 HLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK 341
H +EE + H + SP G A+G +D + + +
Sbjct: 301 HKIFEEEI-----GRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE----KSYFDF 351
Query: 342 TLEGHT 347
+
Sbjct: 352 KYDVEK 357
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 8e-32
Identities = 77/337 (22%), Positives = 118/337 (35%), Gaps = 80/337 (23%)
Query: 279 LVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQ 338
L D ++ T + FSPDG LATG++D + IWD++ +
Sbjct: 101 LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE----NRK 156
Query: 339 HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSC 398
L+GH + L + P LV G D + +W++ T + L+ ED +T+
Sbjct: 157 IVMILQGHEQDIYSLDYFPSGDK-LVSGSGD-RTVRIWDLRTGQCSLTLSI--EDGVTTV 212
Query: 399 SW-NRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIR 456
+ DG G S + VR +W D ++T +
Sbjct: 213 AVSPGDGKYIAAG-----------------SLDRAVR---VW---D------SETGFLVE 243
Query: 457 TYNFEHLTDSNLLQEDH--PVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDRILL 507
L N H V S FT D + S + V LW+L++
Sbjct: 244 R-----LDSENESGTGHKDSVYSVVFTRDGQ-SVV----SGSLDRS--VKLWNLQNANNK 291
Query: 508 RKFQGVTQGQ----FTIHS------CFGGANQD--FVASGSEDGKVYIWHVKRELPIATL 555
+ G + H Q+ ++ SGS+D V W K P+ L
Sbjct: 292 SDSKTPNSGTCEVTYIGHKDFVLSVAT---TQNDEYILSGSKDRGVLFWDKKSGNPLLML 348
Query: 556 SGHTRTVSCVAWNPVYH-----QMIASVSDDCTVRIW 587
GH +V VA + A+ S DC RIW
Sbjct: 349 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 385
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-25
Identities = 67/331 (20%), Positives = 98/331 (29%), Gaps = 89/331 (26%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY-- 352
DH V KFS DG LATG + T ++ V L +
Sbjct: 58 HKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVS----DGSLVARLSDDSAANKDPE 112
Query: 353 ----------------LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSL 395
+ +SPD L G ED + +W+IE + + L H +
Sbjct: 113 NLNTSSSPSSDLYIRSVCFSPDGKFL-ATGAEDRL-IRIWDIENRKIVMILQGHE--QDI 168
Query: 396 TSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHR 454
S + G K V G S + VR +W G+ L
Sbjct: 169 YSLDYFPSGDKLVSG-----------------SGDRTVR---IWDLRTGQCSLTLSIEDG 208
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514
+ T D + + ++D V +WD L+ +
Sbjct: 209 VTTVAV-SPGDGKYI------AAGSLDRA------------VRVWDSETGFLVERLDSEN 249
Query: 515 QGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRELP------------IATLS 556
+ T H F + V SGS D V +W+++ T
Sbjct: 250 E-SGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 307
Query: 557 GHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
GH V VA + I S S D V W
Sbjct: 308 GHKDFVLSVATTQN-DEYILSGSKDRGVLFW 337
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 2e-21
Identities = 51/306 (16%), Positives = 87/306 (28%), Gaps = 93/306 (30%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV---DPVTFTCQHRKTLEGHTLGVA 351
+H + D + K T + +
Sbjct: 9 NQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLD------ 62
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
H V ++ DG G
Sbjct: 63 -------------------HTSVVC--------------------CVKFSNDGEYLATG- 82
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
+ + ++ SDG ++A + + E+L S+
Sbjct: 83 ----------------CNKTTQ---VYRVSDGS-LVARLSDDSAANKDPENLNTSSSPSS 122
Query: 472 DHPVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQGVTQGQFTIHS-C 523
D + S F+ D LA + + +WD+ +R ++ QG Q I+S
Sbjct: 123 DLYIRSVCFSPDGK-FLA----TGAEDRL--IRIWDIENRKIVMILQGHEQD---IYSLD 172
Query: 524 FGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581
+ + SGS D V IW ++ TLS V+ VA +P + IA+ S D
Sbjct: 173 Y---FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-VTTVAVSPGDGKYIAAGSLD 228
Query: 582 CTVRIW 587
VR+W
Sbjct: 229 RAVRVW 234
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 9e-17
Identities = 65/276 (23%), Positives = 95/276 (34%), Gaps = 67/276 (24%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+L H +++ + P G KL +GS D TV IWD+ T Q TL GV +A
Sbjct: 159 MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR----TGQCSLTLSIED-GVTTVA 213
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE------DSLTSCSWNRDGTKFV 408
SP + G D + VW+ ET L +L+ E DS+ S + RDG V
Sbjct: 214 VSPGDGKYIAAGSLD-RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 272
Query: 409 CGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN 467
G S + V+ LW + + + +
Sbjct: 273 SG-----------------SLDRSVK---LW-----------NLQNANNKSDSKTPNSGT 301
Query: 468 LLQ--EDH--PVMS--FTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQG----VT 514
H V+S T + + S +GV WD + L QG V
Sbjct: 302 CEVTYIGHKDFVLSVATTQNDE-YIL----SGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 356
Query: 515 QGQFTIHSCFGGANQD--FVASGSEDGKVYIWHVKR 548
+ + A+GS D K IW K+
Sbjct: 357 SVAV---ANGSSLGPEYNVFATGSGDCKARIWKYKK 389
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 5e-14
Identities = 48/307 (15%), Positives = 96/307 (31%), Gaps = 92/307 (29%)
Query: 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH-ELW-VWNIET-----ELLRVKLNHSPED 393
H+ + DS + + + + ++N L L+H+
Sbjct: 9 NQRANHSKPIPPFLLDLDSQSV-PDALKKQTNDYYILYNPALPREIDVELHKSLDHT--S 65
Query: 394 SLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
+ ++ DG G + + ++ SDG ++A +
Sbjct: 66 VVCCVKFSNDGEYLATG-----------------CNKTTQ---VYRVSDGS-LVARLSDD 104
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDRIL 506
+ E+L S+ D + S F+ D LA + + +WD+ +R +
Sbjct: 105 SAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLA----TGAEDRL--IRIWDIENRKI 157
Query: 507 LRKFQG------------------------------VTQGQ----FTIHS-----CFGGA 527
+ QG + GQ +I
Sbjct: 158 VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217
Query: 528 NQDFVASGSEDGKVYIWHVKRELPIATL-------SGHTRTVSCVAWNPVYHQMIASVSD 580
+ ++A+GS D V +W + + L +GH +V V + Q + S S
Sbjct: 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSL 276
Query: 581 DCTVRIW 587
D +V++W
Sbjct: 277 DRSVKLW 283
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 7e-06
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 6/46 (13%)
Query: 292 ETTQVLNDHCDEVWFCKFS------PDGLKLATGSKDTTVIIWDVD 331
+L H + V + P+ ATGS D IW
Sbjct: 343 NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 4/38 (10%), Positives = 12/38 (31%), Gaps = 1/38 (2%)
Query: 550 LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+P + H++ + + Q + T +
Sbjct: 6 VPYNQRANHSKPIPPFLLDL-DSQSVPDALKKQTNDYY 42
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-31
Identities = 54/305 (17%), Positives = 95/305 (31%), Gaps = 89/305 (29%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
E + ++ H V P+G + + S+D T+ +W+V T KT GH V
Sbjct: 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ----TGYCVKTFTGHREWVR 238
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
+ + D + L+ D + VW + T E H + SW + +
Sbjct: 239 MVRPNQDGT-LIASCSND-QTVRVWVVATKECKAELREH--RHVVECISWAPESSYSS-- 292
Query: 411 GIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
E G +L+ S
Sbjct: 293 -----------------ISEATGSETKKSGKPGPFLLSG----------------SR--- 316
Query: 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS------CF 524
D T + +WD+ + L G H F
Sbjct: 317 ----------DKT------------IKMWDVSTGMCLMTLVG--------HDNWVRGVLF 346
Query: 525 --GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582
GG F+ S ++D + +W K + + TL+ H V+ + ++ + + S D
Sbjct: 347 HSGGK---FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQ 402
Query: 583 TVRIW 587
TV++W
Sbjct: 403 TVKVW 407
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-30
Identities = 60/318 (18%), Positives = 108/318 (33%), Gaps = 79/318 (24%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L+ H V F P + + S+D T+ +WD + T +TL+GHT V ++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDSVQDIS 157
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-- 411
+ L D + +W+ + E +R H +++S S +G V
Sbjct: 158 FDHSGKL-LASCSAD-MTIKLWDFQGFECIRTMHGHD--HNVSSVSIMPNGDHIVSASRD 213
Query: 412 --IRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS 466
I+ +++ G + ++ G V + DG + + S
Sbjct: 214 KTIK----MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC----------------S 253
Query: 467 NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG-------------- 512
N D T R+ W + + + +
Sbjct: 254 N-------------DQTVRV------------WVVATKECKAELREHRHVVECISWAPES 288
Query: 513 ---VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569
+ G F+ SGS D + +W V + + TL GH V V ++
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348
Query: 570 VYHQMIASVSDDCTVRIW 587
+ I S +DD T+R+W
Sbjct: 349 G-GKFILSCADDKTLRVW 365
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 2e-22
Identities = 61/326 (18%), Positives = 97/326 (29%), Gaps = 112/326 (34%)
Query: 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL 362
E + + + W P + L GH V + + P S
Sbjct: 69 ESKLNEAKEEFTSGGPLGQKRDPKEWIPRP-----PEKYALSGHRSPVTRVIFHPVFSV- 122
Query: 363 LVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI 421
+V ED + VW+ ET + R H+ DS+ S++ G
Sbjct: 123 MVSASEDAT-IKVWDYETGDFERTLKGHT--DSVQDISFDHSGKLLASC----------- 168
Query: 422 EGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFE-HLTDSNLLQEDHPVMSFT 479
S + ++ LW D IRT H DH V S
Sbjct: 169 ------SADMTIK---LW---D------FQGFECIRT--MHGH---------DHNVSS-- 197
Query: 480 IDATDRLALLNVSTQG-----------VHLWDLRDRILLRKFQGVTQGQFTIHS------ 522
+++ G + +W+++ ++ F G H
Sbjct: 198 ---------VSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG--------HREWVRMV 240
Query: 523 CFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH-------- 572
NQD +AS S D V +W V + A L H V C++W P
Sbjct: 241 RP---NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 297
Query: 573 -----------QMIASVSDDCTVRIW 587
+ S S D T+++W
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMW 323
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 2e-11
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 505 ILLRKFQGVTQGQFTI---HSCFGGANQDFV--ASGSEDGKVYIWHVKRELPIATLSGHT 559
+L +K+ V + Q + S A ++F + W + LSGH
Sbjct: 50 LLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPE-KYALSGHR 108
Query: 560 RTVSCVAWNPVYHQMIASVSDDCTVRIW 587
V+ V ++PV+ ++ S S+D T+++W
Sbjct: 109 SPVTRVIFHPVF-SVMVSASEDATIKVW 135
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV 330
+ LN H V F + TGS D TV +W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-31
Identities = 56/316 (17%), Positives = 95/316 (30%), Gaps = 56/316 (17%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
V H D + + G +LAT S D +V I+DV L GH V +A
Sbjct: 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR--NGGQILIADLRGHEGPVWQVA 64
Query: 355 WSPDSS-HLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW--NRDGTKFVCG 410
W+ ++L D + +W E + + + S+ S W + G CG
Sbjct: 65 WAHPMYGNILASCSYDRK-VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACG 123
Query: 411 G----IRGQFYQCDIEGQVLDSWEG--VRVNCL-WCRSDGKSVLAADTHHRIRTYNFEHL 463
I Y + + +V + N + W D + +
Sbjct: 124 SSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA-PAVVPGSLIDHPSGQKPNYIKRF 182
Query: 464 -TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDL---RDRILLRKFQGVTQGQFT 519
+ D + LW +K + +
Sbjct: 183 ASGGC-------------DNL------------IKLWKEEEDGQWKEEQKLEAHSD---W 214
Query: 520 IHS-CF---GGANQDFVASGSEDGKVYIWHVK----RELPIATLSGHTRTVSCVAWNPVY 571
+ + G +AS S+DG+V+IW L V V+W+
Sbjct: 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT- 273
Query: 572 HQMIASVSDDCTVRIW 587
++A D V +W
Sbjct: 274 ANILAVSGGDNKVTLW 289
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 3e-15
Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 12/119 (10%)
Query: 294 TQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
L H VW ++ G LA+ S D VIIW + T + GH V
Sbjct: 50 IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE--NGTWEKSHEHAGHDSSVN 107
Query: 352 YLAWSPDSSHLLVV-GPEDCHELWVWNIET----ELLRVKLNHSPEDSLTSCSWNRDGT 405
+ W+P L++ G D + + E+ ++ H+ + SW
Sbjct: 108 SVCWAPHDYGLILACGSSDGA-ISLLTYTGEGQWEVKKINNAHT--IGCNAVSWAPAVV 163
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 5e-14
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 291 CETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL 348
E + H V ++P GL LA GS D + + + +K HT+
Sbjct: 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG-QWEVKKINNAHTI 151
Query: 349 GVAYLAWSPDSSH 361
G ++W+P
Sbjct: 152 GCNAVSWAPAVVP 164
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 5e-13
Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 25/143 (17%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGL-----------------KLATGSKDTTVIIWDVDPVT 334
E ++ N H ++P + + A+G D + +W +
Sbjct: 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE-D 199
Query: 335 FTCQHRKTLEGHTLGVAYLAWSPD---SSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391
+ + LE H+ V +AW+P + + +D +++W +
Sbjct: 200 GQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR-VFIWTCDDASSNTWSPKLL 258
Query: 392 E---DSLTSCSWNRDGTKFVCGG 411
D + SW+ G
Sbjct: 259 HKFNDVVWHVSWSITANILAVSG 281
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 5e-13
Identities = 43/283 (15%), Positives = 73/283 (25%), Gaps = 80/283 (28%)
Query: 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLN-HSPEDSLT 396
H + + L D + ++++ ++L L H +
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTR-LATCSSDRS-VKIFDVRNGGQILIADLRGHE--GPVW 61
Query: 397 SCSWNRDGTKFVCGGIRGQFYQCDIEGQVL--DSWEG-VRVNCLWCRSDGKSVLAADTHH 453
+W G +L S++ V +W +G
Sbjct: 62 QVAWAHPM-----------------YGNILASCSYDRKVI---IWREENGTWE------- 94
Query: 454 RIRTYNFE-HLTDSNLLQEDHPVMS--FTIDATDRLALLNVST---QGVHLWDLRDRI-- 505
+++ H D V S + A L+ + L
Sbjct: 95 --KSHEHAGH---------DSSVNSVCW---APHDYGLILACGSSDGAISLLTYTGEGQW 140
Query: 506 -LLRKFQGVTQG--------------QFTIHSCFGGANQDFVASGSEDGKVYIWHVK--- 547
+ + T G S ASG D + +W +
Sbjct: 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG 200
Query: 548 RELPIATLSGHTRTVSCVAWNP---VYHQMIASVSDDCTVRIW 587
+ L H+ V VAW P + IAS S D V IW
Sbjct: 201 QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 295 QVLNDHCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
Q L H D V ++P +A+ S+D V IW D + K L V
Sbjct: 206 QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVV 265
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381
+++WS ++ +L V D ++ +W +
Sbjct: 266 WHVSWSITAN-ILAVSGGDN-KVTLWKESVD 294
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 4e-11
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 21/92 (22%)
Query: 532 VASGSEDGKVYIWHVKRELP---IATLSGHTRTVSCVAWNP----------------VYH 572
+A GS DG + + E + HT + V+W P Y
Sbjct: 120 LACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYI 179
Query: 573 QMIASVSDDCTVRIWGPHLNTNKSPHLASSLT 604
+ AS D +++W + L
Sbjct: 180 KRFASGGCDNLIKLW--KEEEDGQWKEEQKLE 209
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
+ ++L+ D VW +S LA D V +W + G
Sbjct: 254 SPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES----VDGQWVCISDVNKGQGS 309
Query: 353 LAWSPD 358
++ S
Sbjct: 310 VSASVT 315
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 9e-07
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 554 TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLAS 601
+ H + + Y +A+ S D +V+I+ + +A
Sbjct: 8 VDTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIF--DVRNGGQILIAD 52
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 4e-31
Identities = 59/307 (19%), Positives = 108/307 (35%), Gaps = 65/307 (21%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF--TCQHRKTLEGHTLGVAY 352
+ C V C ++P G +A G D ++ + +K++ HT ++
Sbjct: 100 HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSA 159
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW--NRDGTKFVC 409
+++ + + D +W++E+ +LL+ H + + G FV
Sbjct: 160 CSFTNSDMQI-LTASGD-GTCALWDVESGQLLQSFHGHG--ADVLCLDLAPSETGNTFVS 215
Query: 410 GGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLTDSNL 468
GG CD + +W G+ V A +TH + + + +
Sbjct: 216 GG-------CD---------KKAM---VWDMRSGQCVQAFETHESDVNSVRYYP--SGDA 254
Query: 469 LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528
S + DAT L+DLR + + S GA+
Sbjct: 255 F------ASGSDDAT------------CRLYDLRADREVAIYSK--------ESIIFGAS 288
Query: 529 Q-DF------VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581
DF + +G D + +W V + ++ L GH VS + +P S S D
Sbjct: 289 SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD-GTAFCSGSWD 347
Query: 582 CTVRIWG 588
T+R+W
Sbjct: 348 HTLRVWA 354
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 5e-27
Identities = 51/324 (15%), Positives = 108/324 (33%), Gaps = 95/324 (29%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+T + L H ++V + D ++ + S+D VI+WD T + V
Sbjct: 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF----TTNKEHAVTMPCTWVM 110
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIET-------ELLRVKLNHSPEDSLTSCSWNRDG 404
A++P + G D ++ V+ + + H+ + L++CS+
Sbjct: 111 ACAYAPS-GCAIACGGLD-NKCSVYPLTFDKNENMAAKKKSVAMHT--NYLSACSFTNSD 166
Query: 405 TKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL 463
+ + S +G LW D ++ ++++
Sbjct: 167 MQILTA-----------------SGDGTCA---LW---D------VESGQLLQSF----- 192
Query: 464 TDSNLLQEDH--PVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQGVT 514
H V+ T VS +WD+R ++ F+
Sbjct: 193 -------HGHGADVLCLDLAPSETGNTF---VSGGCDKK--AMVWDMRSGQCVQAFET-- 238
Query: 515 QGQFTIHS------CF---GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT--VS 563
H + G D ASGS+D ++ ++ + +A S + S
Sbjct: 239 ------HESDVNSVRYYPSG----DAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288
Query: 564 CVAWNPVYHQMIASVSDDCTVRIW 587
V ++ +++ + +D T+ +W
Sbjct: 289 SVDFSLS-GRLLFAGYNDYTINVW 311
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 53/320 (16%), Positives = 90/320 (28%), Gaps = 81/320 (25%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD----------PVTFTCQHRKTLE 344
+ + + L ++ + DV+ F + R+TL+
Sbjct: 2 MATDGLHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLK 61
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRD 403
GH V + W D +V +D ++ VW+ T + +C++
Sbjct: 62 GHGNKVLCMDWCKDKRR-IVSSSQD-GKVIVWDSFTTNKEHAVTMPC--TWVMACAYAPS 117
Query: 404 GTKFVCGG----IR---GQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHR 454
G CGG F + + S ++ + +
Sbjct: 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQI-------- 169
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514
LT S D T LWD+ LL+ F G
Sbjct: 170 --------LTASG-------------DGT------------CALWDVESGQLLQSFHG-- 194
Query: 515 QGQFTIHS------CF-GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567
H + SG D K +W ++ + H V+ V +
Sbjct: 195 ------HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY 248
Query: 568 NPVYHQMIASVSDDCTVRIW 587
P AS SDD T R++
Sbjct: 249 YPSG-DAFASGSDDATCRLY 267
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 2e-13
Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 4/72 (5%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
FS G L G D T+ +WDV L GH V
Sbjct: 274 EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL----KGSRVSILFGHENRV 329
Query: 351 AYLAWSPDSSHL 362
+ L SPD +
Sbjct: 330 STLRVSPDGTAF 341
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 1e-30
Identities = 40/305 (13%), Positives = 92/305 (30%), Gaps = 54/305 (17%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
+ +S + +A + ++ ++ + H+ V + ++
Sbjct: 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ 125
Query: 360 SHLLVVGPEDCHELWVWNIET--------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
++L G + E+++W++ L + S D + S +WN+
Sbjct: 126 DNVLASGGNN-GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184
Query: 412 IRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
+W K V+ HL+ ++
Sbjct: 185 ----------------GSSNFAS---IWDLKAKKEVI--------------HLSYTSPNS 211
Query: 471 E-DHPVMS--FTIDATDRLALLNVST--QGVHLWDLRD--RILLRKFQGVTQGQFTIHS- 522
+ + + R+A S + +WDLR+ L QG +G I S
Sbjct: 212 GIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG---ILSL 268
Query: 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582
+ ++ + S D V +W+ + ++ + P + A S D
Sbjct: 269 DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN 328
Query: 583 TVRIW 587
+ +
Sbjct: 329 KIEVQ 333
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 8e-27
Identities = 43/309 (13%), Positives = 94/309 (30%), Gaps = 61/309 (19%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL--GVAYLAWSP 357
H + G A S D+++ +W + K + + L WS
Sbjct: 22 HDKIPLLVSGTVSGTVDANFSTDSSLELWSLL----AADSEKPIASLQVDSKFNDLDWSH 77
Query: 358 DSSHLLVVGPEDCHELWVWNIET-----ELLRVKLNHSPEDSLTSCSWN-RDGTKFVCGG 411
+ + ++ ++ L +++ + NHS S+ + +N + G
Sbjct: 78 N-NKIIAGALDN-GSLELYSTNEANNAINSMARFSNHS--SSVKTVKFNAKQDNVLASG- 132
Query: 412 IRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
G + +W + + T +
Sbjct: 133 ----------------GNNGEIF---IWDMNKCTESPSNYTPLTPGQ----------SMS 163
Query: 471 EDHPVMS--FTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSCFG-- 525
V+S + A + + +WDL+ + + +
Sbjct: 164 SVDEVISLAWNQSLAHVFA--SAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221
Query: 526 ----GANQDFVASGSE-DGKVYIWHVK-RELPIATLS-GHTRTVSCVAWNPVYHQMIASV 578
+ + A+GS+ D + IW ++ P+ TL+ GH + + + W ++ S
Sbjct: 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS 281
Query: 579 SDDCTVRIW 587
D TV +W
Sbjct: 282 GRDNTVLLW 290
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 3e-20
Identities = 44/331 (13%), Positives = 89/331 (26%), Gaps = 82/331 (24%)
Query: 295 QVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVD-----PVTFTCQHRKTLEGHTL 348
++H V KF+ LA+G + + IWD++ P +T
Sbjct: 107 ARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP-----EDSLTSCSWNRD 403
V LAW+ +H+ +W+++ + + L+++ + L+ W+
Sbjct: 167 EVISLAWNQSLAHVFASAGSSNF-ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225
Query: 404 GTKFVCGGIRGQFYQC----DIEG-----QVLDSWEGVRVNCL-WCRSDGKSVLAADTHH 453
+ V D+ Q L+ + L WC D +L++ +
Sbjct: 226 NSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN 285
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
+ LW+ L +F
Sbjct: 286 TVL-----------------------------------------LWNPESAEQLSQFPAR 304
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
F F D A S D K+ + ++ ++ N + Q
Sbjct: 305 GNWCFKT--KFAPEAPDLFACASFDNKIEVQTLQ-------------NLT----NTLDEQ 345
Query: 574 MIASVSDDCTVRIWGPHLNTNKSPHLASSLT 604
+ + W +
Sbjct: 346 ETETKQQESETDFWNNVSREESKEKPSVFHL 376
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 5e-18
Identities = 37/298 (12%), Positives = 88/298 (29%), Gaps = 64/298 (21%)
Query: 319 GSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
G+ + V + + H ++ + + + D L +W++
Sbjct: 1 GAMGSMVKLAEFS----RTAT--FAWSHDKIPLLVSGTVSGT-VDANFSTD-SSLELWSL 52
Query: 379 ET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNC 436
+ + + + W+ + G +
Sbjct: 53 LAADSEKPIASLQVDSKFNDLDWSHNNKIIAGA-----------------LDNGSLE--- 92
Query: 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG- 495
L+ ++ + + + + ++ H V + +A L + G
Sbjct: 93 LYSTNEANNAINS-----MARFS-NH---------SSSVKTVKFNAKQDNVLASGGNNGE 137
Query: 496 VHLWDLRD-RILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKR 548
+ +WD+ + +T GQ + + AS IW +K
Sbjct: 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA 197
Query: 549 ELPIATLS------GHTRTVSCVAWNPVYHQMIASVS---DDCTVRIWGPHLNTNKSP 597
+ + LS G + +S V W+P +A+ + +D ++ IW L +P
Sbjct: 198 KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW--DLRNANTP 253
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 9e-16
Identities = 36/284 (12%), Positives = 76/284 (26%), Gaps = 44/284 (15%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSPDGLK-LATGSKDTTVIIWDVD---PVTFTCQH 339
+ + T DEV ++ A+ IWD+ V +
Sbjct: 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI-HLSY 206
Query: 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE--LWVWNIET---ELLRVKLNHSPEDS 394
G ++ + W P +S + ++ + +W++ L + H
Sbjct: 207 TSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ--KG 264
Query: 395 LTSCSWN-RDGTKFVCGG----IRGQFYQC-DIE-GQVLDSWEGV--RVNCL-WCRSDGK 444
+ S W +D + G + + E + L + + +
Sbjct: 265 ILSLDWCHQDEHLLLSSGRDNTVL-----LWNPESAEQLSQFPARGNWCFKTKFAP-EAP 318
Query: 445 SVLA---ADTHHRIRTYNFEHLTDSNLLQEDHPV-MSFTIDATDRLALLNVSTQGVHLWD 500
+ A D ++I ++LT++ QE D + ++ +
Sbjct: 319 DLFACASFD--NKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL 376
Query: 501 LRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544
FGG V + V I
Sbjct: 377 QAPTWYGEPSPAAHWA-------FGG---KLVQITPDGKGVSIT 410
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-30
Identities = 53/322 (16%), Positives = 92/322 (28%), Gaps = 54/322 (16%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL 343
T + + H V ++ P D + S D T+ +WD + T Q
Sbjct: 83 TCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN----TLQTADVF 138
Query: 344 EGHTLGVAYLAWSPDSSH--LLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW 400
V SP S+ L+ VG + + ++++ + H + + SW
Sbjct: 139 -NFEETVYSHHMSPVSTKHCLVAVGTRGPK-VQLCDLKSGSCSHILQGHR--QEILAVSW 194
Query: 401 NRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYN 459
+ + S + V+ LW L H +
Sbjct: 195 SPRYDYILATA----------------SADSRVK---LWDVRRASGCLITLDQHNGKKSQ 235
Query: 460 FEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQG 512
+ V FT D L + + LW+ + G
Sbjct: 236 AVESA---NTAHNGKVNGLCFTSDGL-HLL----TVGTDNR--MRLWNSSNGENTLVNYG 285
Query: 513 VTQGQFTIH---SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569
+ G + + + ++ V I L GH +TV C +
Sbjct: 286 KVCNNSKKGLKFTVSCGCSSE-FVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS 344
Query: 570 VYHQMIASVSDDCTVRIWGPHL 591
Q + S S DC + W P L
Sbjct: 345 -NFQELYSGSRDCNILAWVPSL 365
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 9e-30
Identities = 44/317 (13%), Positives = 94/317 (29%), Gaps = 72/317 (22%)
Query: 297 LNDHCDEVWFCKFSPDG---LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
+ + + V+ SP +A G++ V + D+ + L+GH + +
Sbjct: 137 VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK----SGSCSHILQGHRQEILAV 192
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSP-------------EDSLTSC 398
+WSP ++L D + +W++ L H+ +
Sbjct: 193 SWSPRYDYILATASAD-SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251
Query: 399 SWNRDGTKFVCGG----IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHR 454
+ DG + G +R LW S+G++ L
Sbjct: 252 CFTSDGLHLLTVGTDNRMR-----------------------LWNSSNGENTLVNYGK-- 286
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514
+N + +S + + + ++ + + +G
Sbjct: 287 ---------VCNNSKKGLKFTVSCGCSS--EFVFV-PYGSTIAVYTVYSGEQITMLKGHY 334
Query: 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574
+ T+ C +N + SGS D + W + T + NP + +
Sbjct: 335 K---TVDCCVFQSNFQELYSGSRDCNILAWVPSLY---EPVPDDDETTTKSQLNPAF-ED 387
Query: 575 IASVS-DDCTVRIWGPH 590
S S ++ W
Sbjct: 388 AWSSSDEEGGTSAWSHP 404
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 5e-20
Identities = 41/318 (12%), Positives = 87/318 (27%), Gaps = 93/318 (29%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
+ L ++T + ++ + R H G+ L P ++ G
Sbjct: 9 QTGLEDPLRLRRAESTRRVLGLE----LNKDRDVERIHGGGINTLDIEPVEGRYMLSGGS 64
Query: 369 DCHELWVWNIETELLRVKLNHSP------------EDSLTSCSWN-RDGTKFVCGGIRGQ 415
D + ++++E + S+ + W D F
Sbjct: 65 D-GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS----- 118
Query: 416 FYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHP 474
S++ ++ +W +T F +
Sbjct: 119 ------------SFDKTLK---VW---------DTNTLQTADV--FNF---------EET 143
Query: 475 VMS--FTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHS------CFG 525
V S + +T + + V L DL+ QG H +
Sbjct: 144 VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG--------HRQEILAVSWS 195
Query: 526 GANQDFVASGSEDGKVYIWHVKR----------------ELPIATLSGHTRTVSCVAWNP 569
+A+ S D +V +W V+R + + + H V+ + +
Sbjct: 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255
Query: 570 VYHQMIASVSDDCTVRIW 587
+ +V D +R+W
Sbjct: 256 D-GLHLLTVGTDNRMRLW 272
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 1e-14
Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 8/89 (8%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
E +L H V C F + +L +GS+D ++ W + +
Sbjct: 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP-------SLYEPVPDDDETTT 377
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIET 380
+P ++ W+
Sbjct: 378 KSQLNPAFED-AWSSSDEEGGTSAWSHPQ 405
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 5e-30
Identities = 61/313 (19%), Positives = 97/313 (30%), Gaps = 66/313 (21%)
Query: 300 HCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVD----------------PVTFTCQHRKT 342
D + ++P D LA G K++ + + + +
Sbjct: 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSAS 103
Query: 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR 402
T V LAWS D + +V G E+ EL +WN LL V H + S WN+
Sbjct: 104 SGKTTNQVTCLAWSHDGNS-IVTGVEN-GELRLWNKTGALLNVLNFHR--APIVSVKWNK 159
Query: 403 DGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTH----HRIRT 457
DGT + E LW G + + I
Sbjct: 160 DGTHIISM-----------------DVENVTI---LWNVISGTVMQHFELKETGGSSINA 199
Query: 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517
N + E F I + ++ + ++ K G
Sbjct: 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKGA---------IFVYQITEKTPTGKLIGHHGP- 249
Query: 518 FTIHS-CFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574
I F N + S S+DG + IWH GH++++ +W
Sbjct: 250 --ISVLEF---NDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVG--DDK 302
Query: 575 IASVSDDCTVRIW 587
+ S S D +VR+W
Sbjct: 303 VISCSMDGSVRLW 315
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 3e-27
Identities = 49/326 (15%), Positives = 92/326 (28%), Gaps = 93/326 (28%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349
P + ++V +S DG + TG ++ + +W+ T L H
Sbjct: 97 PFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-----TGALLNVLNFHRAP 151
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPE-------------DSL 395
+ + W+ D +H ++ + + +WN+ + +++
Sbjct: 152 IVSVKWNKDGTH-IISMDVE-NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLG 209
Query: 396 TSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTH 452
W D KFV G +G + I G ++ L K +L+A
Sbjct: 210 VDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA--- 265
Query: 453 HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512
S+ D T + +W + F G
Sbjct: 266 -------------SD-------------DGT------------LRIWHGGNGNSQNCFYG 287
Query: 513 VTQGQFTIHSCFGGANQDFV-----------ASGSEDGKVYIWHVKRELPIATLSGHTRT 561
HS + S S DG V +W +K+ +A
Sbjct: 288 --------HS-------QSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVP 332
Query: 562 VSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + Q A D V ++
Sbjct: 333 IFAGRISQ-DGQKYAVAFMDGQVNVY 357
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 4e-27
Identities = 52/314 (16%), Positives = 100/314 (31%), Gaps = 76/314 (24%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG---VA 351
VLN H + K++ DG + + + I+W+V + + E G +
Sbjct: 143 NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI----SGTVMQHFELKETGGSSIN 198
Query: 352 YLAWSPDSSHL----------LVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSW 400
S D S V+ ++V+ I + KL H ++ +
Sbjct: 199 AENHSGDGSLGVDVEWVDDDKFVIPGPK-GAIFVYQITEKTPTGKLIGHH--GPISVLEF 255
Query: 401 NRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTH-HRIRTY 458
N + S +G +R +W +G S H I +
Sbjct: 256 NDTNKLLLSA-----------------SDDGTLR---IWHGGNGNSQNCFYGHSQSIVSA 295
Query: 459 NFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG----VT 514
++ D V+S ++D + V LW L+ LL +
Sbjct: 296 SWVG---------DDKVISCSMDGS------------VRLWSLKQNTLLALSIVDGVPIF 334
Query: 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQ 573
G+ + + A DG+V ++ +K+ +L G+ + P+Y
Sbjct: 335 AGRIS-------QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS 387
Query: 574 MIASVSDDCTVRIW 587
+S +D +
Sbjct: 388 YQSSQDNDYIFDLS 401
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-19
Identities = 43/314 (13%), Positives = 91/314 (28%), Gaps = 92/314 (29%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
D S D + + + + W+P +L G +
Sbjct: 18 TQEDDTNSIDSSDDLDGFVKILKEI-----------VKLDNIVSSTWNPLDESILAYGEK 66
Query: 369 DC--------------HELWVWNIETELLRVKLNHSP----EDSLTSCSWNRDGTKFVCG 410
+ + W I EL + + +T +W+ DG V G
Sbjct: 67 NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTG 126
Query: 411 G----IRGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464
+R + G +L+ + + DG +++ D +
Sbjct: 127 VENGELR----LWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTI-------- 174
Query: 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
LW++ +++ F+ G +I++
Sbjct: 175 ---------------------------------LWNVISGTVMQHFELKETGGSSINAEN 201
Query: 525 GGANQDFV-----------ASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
+ G ++++ + + P L GH +S + +N ++
Sbjct: 202 HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNK 260
Query: 574 MIASVSDDCTVRIW 587
++ S SDD T+RIW
Sbjct: 261 LLLSASDDGTLRIW 274
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 1e-14
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ ++ + S DG K A D V ++D+ + R +L G+ G+
Sbjct: 324 ALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK--KLNSKSR-SLYGNRDGILNPL 380
Query: 355 WSPDSSHLLVVGPEDC-HELWVWNIETELLRVKL-NHS 390
P + D +L WN + V
Sbjct: 381 PIPLYASYQSSQDNDYIFDLS-WNCAGNKISVAYSLQE 417
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 7/64 (10%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
Query: 525 GGANQDFVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCT 583
G + + + + + I + WNP+ ++A +
Sbjct: 10 GASTVERETQEDDTNSIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSV 69
Query: 584 VRIW 587
R+
Sbjct: 70 ARLA 73
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-29
Identities = 58/309 (18%), Positives = 108/309 (34%), Gaps = 66/309 (21%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ ++ D V F P + T V IW+ + T ++++ V
Sbjct: 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYE----TQVEVRSIQVTETPVRAGK 62
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413
+ + ++VG +D + V+N T E + H D + S + + + G
Sbjct: 63 FIARKNW-IIVGSDDFR-IRVFNYNTGEKVVDFEAHP--DYIRSIAVHPTKPYVLSG--- 115
Query: 414 GQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472
S + V+ LW + ++ H +
Sbjct: 116 --------------SDDLTVK---LWNWENNWALEQTFEGH------------------E 140
Query: 473 HPVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDRILLRK-FQGVTQGQFTIHSCF 524
H VM F A S T V +W L G +G + +
Sbjct: 141 HFVMCVAFNPKDPSTFA----SGCLDRT--VKVWSLGQSTPNFTLTTGQERGVNYV-DYY 193
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584
++ ++ + S+D + IW + + +ATL GH VS ++P +I S S+D T+
Sbjct: 194 PLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT-LPIIISGSEDGTL 252
Query: 585 RIWGPHLNT 593
+IW + +T
Sbjct: 253 KIW--NSST 259
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 9e-27
Identities = 47/299 (15%), Positives = 94/299 (31%), Gaps = 55/299 (18%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ + V KF + GS D + +++ + T E H + +A
Sbjct: 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN--TGEKVV--DFEAHPDYIRSIA 104
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPEDSLTSCSWN-RDGTKFVCGG 411
P + ++ G +D + +WN E L + H + ++N +D + F G
Sbjct: 105 VHPTKPY-VLSGSDD-LTVKLWNWENNWALEQTFEGHE--HFVMCVAFNPKDPSTFASG- 159
Query: 412 IRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHR--IRTYNFEHLTDSNL 468
+ V+V W T + ++ L D
Sbjct: 160 ----------------CLDRTVKV---WSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200
Query: 469 LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528
+ ++ + D T + +WD + + + +G +
Sbjct: 201 M------ITASDDLT------------IKIWDYQTKSCVATLEGHMSN---VSFAVFHPT 239
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ SGSEDG + IW+ TL+ C+A +P + + D +
Sbjct: 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-22
Identities = 43/303 (14%), Positives = 84/303 (27%), Gaps = 39/303 (12%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L H V F F P + +GS+D T+ IW+ T + KTL +A
Sbjct: 222 ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS----TYKVEKTLNVGLERSWCIA 277
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH------SPEDS-LTSCSWNRDGTKF 407
P + D + V ++ + + L+ S + S +
Sbjct: 278 THPTGRKNYIASGFD-NGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGN 336
Query: 408 VCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN 467
E +D + L +G+ V + + +
Sbjct: 337 EEVEQDEPLSLQTKELGSVDVF----PQSLAHSPNGRFVTVVGDGEYV-------IYTAL 385
Query: 468 LLQEDH--PVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
+ F AL++ + Q + + + I F
Sbjct: 386 AWRNKAFGKCQDFVWGPDSNSYALIDETGQ-IKYYKNFKEVTSWSVPMH----SAIDRLF 440
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584
GA + DG VY + + + + V W+ +++ V+ +
Sbjct: 441 SGA----LLGVKSDGFVYFFDWDNGTLVRRIDVN---AKDVIWSDNG-ELVMIVNTNSNG 492
Query: 585 RIW 587
Sbjct: 493 DEA 495
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 2e-18
Identities = 51/344 (14%), Positives = 88/344 (25%), Gaps = 60/344 (17%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQH-RKTLEGHTLGVAYL 353
H D + P + +GS D TV +W+ + +T EGH V +
Sbjct: 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE----NNWALEQTFEGHEHFVMCV 146
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSC--SWNRDGTKFVCGG 411
A++P G D + VW++ L E + D +
Sbjct: 147 AFNPKDPSTFASGCLD-RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205
Query: 412 ----IRGQFYQCDI----EGQVLDSWEG--VRVNCLWCRSDGKSVL--AADTHHRI---R 456
I+ I + + EG V+ ++ + D +I
Sbjct: 206 DDLTIK-------IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258
Query: 457 TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST-QGVHLWDLRDRILLRKFQGVTQ 515
TY E L T R + G + L + V +
Sbjct: 259 TYKVEK----TLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGK 314
Query: 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE-----LPIATLSGHTRTVSCVAWNPV 570
++ + AS + + L L +A +P
Sbjct: 315 LVWSGGK-------NAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPN 367
Query: 571 YHQMIASVSDDCTVRIW---------GPHLNTNKSP---HLASS 602
+ + V D V G + P A
Sbjct: 368 G-RFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALI 410
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 3e-14
Identities = 50/266 (18%), Positives = 91/266 (34%), Gaps = 72/266 (27%)
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLT 396
+KT + V + + P ++ + +WN ET++ + E +
Sbjct: 4 DIKKTFSNRSDRVKGIDFHPTEPW-VLTTLYSGR-VEIWNYETQVEVRSIQVT--ETPVR 59
Query: 397 SCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTH-HR 454
+ + + G S + +RV + + G+ V+ + H
Sbjct: 60 AGKFIARKNWIIVG-----------------SDDFRIRV---FNYNTGEKVVDFEAHPDY 99
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTI----DATDRLALLNVSTQGVHLWDLRDRILLRK- 509
IR+ HP + + D T V LW+ + L +
Sbjct: 100 IRSIAV------------HPTKPYVLSGSDDLT------------VKLWNWENNWALEQT 135
Query: 510 FQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRELPIATL-SGHTRTV 562
F+G H F + ASG D V +W + + P TL +G R V
Sbjct: 136 FEG--------HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187
Query: 563 SCVAWNPVYH-QMIASVSDDCTVRIW 587
+ V + P+ + + SDD T++IW
Sbjct: 188 NYVDYYPLPDKPYMITASDDLTIKIW 213
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 39/299 (13%), Positives = 78/299 (26%), Gaps = 76/299 (25%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTV----IIWDVDPVTFTCQHRKTLEGHTLGVAYLAW 355
D V +S A+ + + +P++ K L + LA
Sbjct: 308 SLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLS---LQTKELGSVDVFPQSLAH 364
Query: 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415
SP+ + VVG DG + +
Sbjct: 365 SPNGRFVTVVG------------------------------------DGEYVIYTALAW- 387
Query: 416 FYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPV 475
+ G+ D G N + + + +++
Sbjct: 388 --RNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVP-------------- 431
Query: 476 MSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQG-VTQGQFTIHSCFGGANQDFVA 533
M ID ALL V + G V+ +D + L+R+ ++ N + V
Sbjct: 432 MHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWS-------DNGELVM 484
Query: 534 SGSEDG-----KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + Y ++ + + S ++ +S+ T W
Sbjct: 485 IVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAF--DVLYELSESITSGKW 541
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-29
Identities = 52/325 (16%), Positives = 96/325 (29%), Gaps = 78/325 (24%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ N H + + G +LAT S D T+ I++V+ T TL GH V +
Sbjct: 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID--TLTGHEGPVWRVD 62
Query: 355 WSPDSS-HLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW--NRDGTKFVCG 410
W+ +L D + +W E ++ ++ S+ S W + G +
Sbjct: 63 WAHPKFGTILASCSYDGK-VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA 121
Query: 411 GIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGK-SVLAADTHHRIRTYNFE-HLTDSNL 468
SDGK SV+ + + H
Sbjct: 122 S-----------------------------SDGKVSVVEFKENGTTSPIIIDAH------ 146
Query: 469 LQEDHPVMS--FTIDATDRLALLNVSTQG-----------VHLWDL----RDRILLRKFQ 511
V S + + N + + V +W + +L +
Sbjct: 147 ---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 203
Query: 512 GVTQGQFTIHS-CF---GGANQDFVASGSEDGKVYIWHVKRELP-----IATLSGHTRTV 562
G + + + ++AS S+D IW E + +
Sbjct: 204 GHSD---WVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 259
Query: 563 SCVAWNPVYHQMIASVSDDCTVRIW 587
+W+ ++A D V +W
Sbjct: 260 WRASWSLS-GNVLALSGGDNKVTLW 283
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 6e-18
Identities = 52/327 (15%), Positives = 96/327 (29%), Gaps = 65/327 (19%)
Query: 294 TQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
L H VW ++ G LA+ S D V+IW + H+ V
Sbjct: 48 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE--NGRWSQIAVHAVHSASVN 105
Query: 352 YLAWSPDSSHLLVV-GPEDCHELWVWNIET--ELLRVKLN-HSPEDSLTSCSWN------ 401
+ W+P L++ D + V + + ++ H+ + S SW
Sbjct: 106 SVQWAPHEYGPLLLVASSDGK-VSVVEFKENGTTSPIIIDAHA--IGVNSASWAPATIEE 162
Query: 402 -------RDGTKFVCGG----IRGQFYQCDIE-GQVLDSWEGV--RVNCL-WC--RSDGK 444
++ KFV GG ++ Y D + + + EG V + W
Sbjct: 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 222
Query: 445 SVLAADTHHRIRTYNFEHLTDSN----LLQEDH--PVMS--FTIDATDRLALLNVSTQG- 495
+ + + ++ L +E + +++ LA + G
Sbjct: 223 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLA----LSGGD 277
Query: 496 --VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553
V LW +G + +H Q SG + + I
Sbjct: 278 NKVTLWK-------ENLEGKWEPAGEVH-------QGGGGSGGGGATSKEFDGPCQNEID 323
Query: 554 TLSGHTRTVSCVAWNPVYH-QMIASVS 579
L A + + AS +
Sbjct: 324 LLFSECNDEIDNAKLIMKERRFTASYT 350
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 8e-15
Identities = 32/142 (22%), Positives = 47/142 (33%), Gaps = 24/142 (16%)
Query: 291 CETTQVLNDHCDEVWFCKFSP-------------DGLKLATGSKDTTVIIWDVDPVTFTC 337
+ +++ H V ++P + K TG D V IW + T
Sbjct: 137 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 196
Query: 338 QHRKTLEGHTLGVAYLAWSPDS--SHLLVVGPEDCHELWVWNIETE------LLRVKLNH 389
TLEGH+ V +AWSP L +D +W + E L +
Sbjct: 197 VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWTQDNEQGPWKKTLLKEEKF 255
Query: 390 SPEDSLTSCSWNRDGTKFVCGG 411
D L SW+ G G
Sbjct: 256 P--DVLWRASWSLSGNVLALSG 275
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 8e-12
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 14/78 (17%)
Query: 532 VASGSEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYH------------QMIAS 577
+ S DGKV + K + H V+ +W P + +
Sbjct: 118 LLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 177
Query: 578 VSDDCTVRIWGPHLNTNK 595
D V+IW + +
Sbjct: 178 GGADNLVKIWKYNSDAQT 195
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 4e-08
Identities = 15/115 (13%), Positives = 27/115 (23%), Gaps = 20/115 (17%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
T D +W +S G LA D V +W LEG
Sbjct: 248 TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE-----------NLEGKWEPAGE 296
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTK 406
+ S G ++ + + + + + +
Sbjct: 297 VHQGGGGS-----GGGG-ATSKEFDGPCQNEIDLLFSEC--NDEIDNAKLIMKER 343
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + H + + Y + +A+ S D T++I+
Sbjct: 4 VVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIF 38
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 5e-05
Identities = 10/56 (17%), Positives = 14/56 (25%), Gaps = 12/56 (21%)
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+A D KV +W L G V S T + +
Sbjct: 271 LALSGGDNKVTLWK-------ENLEGKWEPAGEVHQGGG-----GSGGGGATSKEF 314
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-29
Identities = 54/308 (17%), Positives = 95/308 (30%), Gaps = 60/308 (19%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L H V C + + TG+ D + ++D + L GH GV L
Sbjct: 115 TTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGGVWALK 169
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR 413
++ +LV G D + VW+I+ V H+ ++ V G
Sbjct: 170 YAHGG--ILVSGSTD-RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG--- 223
Query: 414 GQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE- 471
S + + V W SV H + +
Sbjct: 224 --------------SRDNTLHV---WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266
Query: 472 ---DHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQG----VTQGQFT 519
V + + + + VS T + +WD+ L G + +
Sbjct: 267 RGHMASVRTVSGHG-NIV----VSGSYDNT--LIVWDVAQMKCLYILSGHTDRIYSTIYD 319
Query: 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS 579
+ S S D + IW ++ + TL GHT V + + + + S +
Sbjct: 320 -------HERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD---KFLVSAA 369
Query: 580 DDCTVRIW 587
D ++R W
Sbjct: 370 ADGSIRGW 377
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 4e-19
Identities = 58/343 (16%), Positives = 103/343 (30%), Gaps = 82/343 (23%)
Query: 273 LENVSLLVDHLCTKEEFP-CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
+ + L L E F + LN + + D L+L+ + W
Sbjct: 49 IRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQDRLRLSFLENIFILKNWYNP 108
Query: 332 PVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-H- 389
R TL GH V D+ ++ G +D + V++ + ++L+ H
Sbjct: 109 K---FVPQRTTLRGHMTSVITCLQFEDN--YVITGADD-KMIRVYDSINKKFLLQLSGHD 162
Query: 390 --------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQC--DIE-GQVLDSWEG----VRV 434
+ L S S D T +R DI+ G +EG VR
Sbjct: 163 GGVWALKYAHGGILVSGST--DRT------VR------VWDIKKGCCTHVFEGHNSTVRC 208
Query: 435 NCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ 494
+ + K ++ + + + + E+H
Sbjct: 209 LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL----------------- 251
Query: 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK----------VYIW 544
V + + +G H V + S G + +W
Sbjct: 252 -VFHTPEENPYFVGVLRG--------HM-------ASVRTVSGHGNIVVSGSYDNTLIVW 295
Query: 545 HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
V + + LSGHT + ++ + S S D T+RIW
Sbjct: 296 DVAQMKCLYILSGHTDRIYSTIYDHE-RKRCISASMDTTIRIW 337
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 1e-16
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 10/120 (8%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ +L+ H D ++ + + + + S DTT+ IWD++ + TL+GHT V
Sbjct: 300 MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE----NGELMYTLQGHTALV 355
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
L S LV D + W+ + +H+ + ++ V G
Sbjct: 356 GLLRLSDK---FLVSAAADGS-IRGWDANDYSRKFSYHHT--NLSAITTFYVSDNILVSG 409
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 8e-09
Identities = 9/85 (10%), Positives = 25/85 (29%), Gaps = 9/85 (10%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ H + F L +GS + I+++ + + + +
Sbjct: 385 KFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR--SGKLV-HANILKDADQIWSVN 440
Query: 355 WSPDSSHLLVVG--PEDCHELWVWN 377
+ + LV + L + +
Sbjct: 441 FKGKT---LVAAVEKDGQSFLEILD 462
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 20/98 (20%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRE 549
+ +WDL + L+ QG H+ F+ S + DG + W
Sbjct: 334 IRIWDLENGELMYTLQG--------HTALVGLLRLSD---KFLVSAAADGSIRGWDANDY 382
Query: 550 LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
HT + + ++ S S++ I+
Sbjct: 383 SRK-FSYHHTNLSAITTFYV-SDNILVSGSEN-QFNIY 417
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 7/58 (12%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 531 FVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ SGS + + I++++ +L A + + V + + + + +
Sbjct: 405 ILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKG---KTLVAAVEKDGQSFL 458
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 4e-29
Identities = 68/340 (20%), Positives = 111/340 (32%), Gaps = 64/340 (18%)
Query: 295 QVLNDHCD-EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
+ H D WF ++P G LA+ D + IW + ++ C+ EGH V +
Sbjct: 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV-LSEGHQRTVRKV 67
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIET---ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
AWSP ++L D +W E + H E+ + S +W G
Sbjct: 68 AWSPCGNYL-ASASFDAT-TCIWKKNQDDFECVTTLEGH--ENEVKSVAWAPSGNLLATC 123
Query: 411 G----IR------GQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNF 460
+ Y+C VL+S V + + + +A ++ Y
Sbjct: 124 SRDKSVWVWEVDEEDEYEC---VSVLNSHTQ-DVKHVVWHPSQELLASASYDDTVKLYRE 179
Query: 461 EHLTDSNLLQE-----DHPVMS--F-----TI-----DATDRL---ALLNVSTQGVHLWD 500
E D + + V S F + D T R+ L
Sbjct: 180 E--EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237
Query: 501 LRDRILLRKFQGVTQGQFTIHS-CF---GGANQDFVASGSEDGKVYIWHVK--------- 547
+ G TI+ + G +A+ D + ++
Sbjct: 238 DPSWKCICTLSGFHSR--TIYDIAWCQLTG----ALATACGDDAIRVFQEDPNSDPQQPT 291
Query: 548 RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
L H++ V+CVAWNP ++AS SDD V W
Sbjct: 292 FSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-20
Identities = 53/290 (18%), Positives = 93/290 (32%), Gaps = 63/290 (21%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP-VTFTCQHRKTLEGHTLGV 350
E L H +EV ++P G LAT S+D +V +W+VD + C L HT V
Sbjct: 96 ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS--VLNSHTQDV 153
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLN-HSPEDSLTSCSWNRDGTKF 407
++ W P LL D + ++ E + L H ++ S +++ G +
Sbjct: 154 KHVVWHPS-QELLASASYD-DTVKLYREEEDDWVCCATLEGHE--STVWSLAFDPSGQRL 209
Query: 408 VCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDG------KSVLAADTHHRIRTYNF 460
S + VR +W + + + I T +
Sbjct: 210 ASC-----------------SDDRTVR---IWRQYLPGNEQGVACSGSDPSWKCICTLSG 249
Query: 461 EHLTDSNLLQEDHPVMS--FTIDATDRLALLNVST---QGVHLWDLRD-RILLRKFQGVT 514
H + + T LA + + ++ + +T
Sbjct: 250 FH---------SRTIYDIAWCQL-TGALA----TACGDDAIRVFQEDPNSDPQQPTFSLT 295
Query: 515 QGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558
HS + +AS S+DG+V W +R + H
Sbjct: 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHHHHH 345
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 4e-17
Identities = 34/186 (18%), Positives = 57/186 (30%), Gaps = 30/186 (16%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE 344
++E+ C VLN H +V + P LA+ S D TV ++ + + C TLE
Sbjct: 136 EEDEYEC--VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCA--TLE 191
Query: 345 GHTLGVAYLAWSPDSSHL-------------LVVGPEDCHELWVWNIETELLRVKLNHSP 391
GH V LA+ P L + + + + L+
Sbjct: 192 GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH 251
Query: 392 EDSLTSCSWNRDGTKFVCGG----IR------GQFYQCDIEGQVLDSWEG--VRVNCL-W 438
++ +W + IR Q + VNC+ W
Sbjct: 252 SRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAW 311
Query: 439 CRSDGK 444
+
Sbjct: 312 NPKEPG 317
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 2e-16
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
+ + H V +SP G LA+ S D T IW + + TLEGH V
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN--QDDFECVTTLEGHENEVKS 110
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSPEDSLTSCSWNRDGT 405
+AW+P + L D +WVW ++ E + V +H+ + W+
Sbjct: 111 VAWAPSGNL-LATCSRD-KSVWVWEVDEEDEYECVSVLNSHT--QDVKHVVWHPSQE 163
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 531 FVASGSEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588
++AS S D IW + TL GH V VAW P ++A+ S D +V +W
Sbjct: 75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVW- 132
Query: 589 PHLNTNKSPHLASSLT 604
++ S L
Sbjct: 133 -EVDEEDEYECVSVLN 147
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 6e-08
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 5/64 (7%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKT 342
++ T + H +V ++P + LA+ S D V W +
Sbjct: 286 DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ----RPEGLHH 341
Query: 343 LEGH 346
H
Sbjct: 342 HHHH 345
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 551 PIATLSGHTR-TVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + H +AWNP ++AS D +RIW
Sbjct: 7 LLGRVPAHPDSRCWFLAWNPA-GTLLASCGGDRRIRIW 43
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 5e-29
Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 66/305 (21%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ ++ H + C ++ T D +V+ + P F+ R T V
Sbjct: 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR-THHKQGSFV 209
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW---NRDGTK 406
+ +SPDS ++ D + ++ ++ E L+ + + + + D K
Sbjct: 210 RDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEFLKYIEDDQ--EPVQGGIFALSWLDSQK 266
Query: 407 FVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465
F + +R +W + K ++ + +
Sbjct: 267 FATV-----------------GADATIR---VWDVTTSKC---------VQKWTLD---- 293
Query: 466 SNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
++ + AT ++++S G ++ ++L +L+ G +G I +
Sbjct: 294 ----KQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKG---ITAL- 345
Query: 525 GGANQDF--VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582
+ SGS DG++ W H+ + + + Q +S+S D
Sbjct: 346 -----TVNPLISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNSK--AQEYSSISWDD 393
Query: 583 TVRIW 587
T+++
Sbjct: 394 TLKVN 398
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 9e-27
Identities = 41/309 (13%), Positives = 82/309 (26%), Gaps = 68/309 (22%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLAT--GSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ + +G +L +D + D + + GH+ +
Sbjct: 108 VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD----SGNSLGEVSGHSQRI 163
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSPEDSLTSCSWNRD-GT 405
+ +D + + R + ++ D G
Sbjct: 164 NACHLKQSRPMRSMTVGDDGS-VVFYQGPPFKFSASDRTHHKQG--SFVRDVEFSPDSGE 220
Query: 406 KFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465
+ G SD K I ++
Sbjct: 221 FVITVG-----------------------------SDRK----------ISCFD---GKS 238
Query: 466 SNLLQ--EDH--PVMS--FTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQF 518
L+ ED PV F + D V + +WD+ ++K+ Q
Sbjct: 239 GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG 298
Query: 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578
+ S S DG + + + + + T+SGH + ++ + NP + S
Sbjct: 299 NQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNP-----LISG 353
Query: 579 SDDCTVRIW 587
S D + W
Sbjct: 354 SYDGRIMEW 362
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 9e-27
Identities = 45/312 (14%), Positives = 90/312 (28%), Gaps = 63/312 (20%)
Query: 295 QVLNDHC-DEVWFCKFSP--DGLKLATGSKDTTVIIWDVD----PVTFTCQHRKTLEGHT 347
H V KFSP L +G + VI+W + + +
Sbjct: 57 VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA 116
Query: 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTK 406
++ ++W + L VVG + + ++ L HS + +C +
Sbjct: 117 GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHS--QRINACHLKQSRPM 174
Query: 407 FVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465
+G V + K + THH +
Sbjct: 175 RSMTV----------------GDDGSVV---FYQGPPFKFSASDRTHH-------KQ--- 205
Query: 466 SNLLQEDHPVMS--FTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHS 522
V F+ D+ + + V + + +D + L+ + Q +
Sbjct: 206 ------GSFVRDVEFSPDSGEFVI--TVGSDRKISCFDGKSGEFLKYIED---DQEPVQG 254
Query: 523 -CFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVS----CVAWNPVYHQMI 575
F + D A+ D + +W V + + + + V + I
Sbjct: 255 GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG--NGRI 312
Query: 576 ASVSDDCTVRIW 587
S+S D T+ +
Sbjct: 313 ISLSLDGTLNFY 324
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-24
Identities = 39/302 (12%), Positives = 94/302 (31%), Gaps = 32/302 (10%)
Query: 292 ETTQVLNDHCDEVWFCKFSP---DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL 348
E + + D + V F+ D K AT D T+ +WDV T C + TL+ L
Sbjct: 240 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT--TSKCVQKWTLDKQQL 297
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKF 407
G + + ++ D L + + E+L+ H+ +T+ + N
Sbjct: 298 GNQQVGVVATGNGRIISLSLD-GTLNFYELGHDEVLKTISGHN--KGITALTVNP----L 350
Query: 408 VCGGIRGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465
+ G G+ + + + L S + + ++ +
Sbjct: 351 ISGSYDGRIMEWSSSSM----HQDHSNLIVSL-DNSKAQEYSSISWDDTLK------VNG 399
Query: 466 SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525
+ + D + + + + +++ + + G + S
Sbjct: 400 ITKHEFGSQPKVASA-NNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG--SAVSLSQ 456
Query: 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
+ G+ + ++ + T S ++ +P IA+ +
Sbjct: 457 NYVAVGLEEGNTIQVFKLSDLEVSFDLKT--PLRAKPSYISISPS-ETYIAAGDVMGKIL 513
Query: 586 IW 587
++
Sbjct: 514 LY 515
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-24
Identities = 40/310 (12%), Positives = 86/310 (27%), Gaps = 85/310 (27%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
E + ++ H + +P L +GS D ++ W + H+ +
Sbjct: 330 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS---------SMHQDHSNLIV 376
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
L S D L V I H S N DG V
Sbjct: 377 SLDNSKAQ--EYSSISWDDT-LKVNGITK--------HEFGSQPKVASANNDGFTAVLT- 424
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
+ + + + G + + + +
Sbjct: 425 ----------------NDDDLL---ILQSFTGDIIKSVRLNSPGSAVSL----------- 454
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CF---GGA 527
S A L + ++ L D + + +
Sbjct: 455 -----SQNYVAV-GLE----EGNTIQVFKLSDLEVSFDLKTPLRA--KPSYISISPSE-- 500
Query: 528 NQDFVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCVAWNP---------VYHQMIAS 577
++A+G GK+ ++ ++ RE+ + + T ++ ++W P + ++A+
Sbjct: 501 --TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 558
Query: 578 VSDDCTVRIW 587
S D + I+
Sbjct: 559 GSLDTNIFIY 568
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-24
Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 59/305 (19%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY-LAWSPD 358
+ + P +A + + +D GH V + +SP
Sbjct: 17 QRNFTTHLSYDPTTNAIAYPCGKS-AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 75
Query: 359 SS-HLLVVGPEDCHELWVWNIETELLRVKLNHSP-------EDSLTSCSWNRDGTKFVCG 410
L G E ++ VW + + + ++ SW+ +G +
Sbjct: 76 KGSQYLCSGDES-GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134
Query: 411 GIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL 469
G + + + D+ + + + H
Sbjct: 135 G---------------EGRDNFGV---FI---------SWDSGNSLGEVS-GH------- 159
Query: 470 QEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHS-CF--- 524
+ + + + + + V G V + + + + F
Sbjct: 160 --SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD 217
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH--QMIASVSDDC 582
G +FV + D K+ + K + + V + + Q A+V D
Sbjct: 218 SG---EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA 274
Query: 583 TVRIW 587
T+R+W
Sbjct: 275 TIRVW 279
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 3e-22
Identities = 45/303 (14%), Positives = 89/303 (29%), Gaps = 72/303 (23%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS 356
DH + + S + ++ S D T+ + + + +A +
Sbjct: 368 HQDHSNLIVSLDNS-KAQEYSSISWDDTLKVNGIT------------KHEFGSQPKVASA 414
Query: 357 PDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416
+ V+ +D +L + T + + + S S S N G
Sbjct: 415 NNDGFTAVLTNDD--DLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGN----- 467
Query: 417 YQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVM 476
++V L + T R
Sbjct: 468 --------------TIQVFKLSDLEVSFDLK---TPLR------------------AKPS 492
Query: 477 S--FTIDATDRLALLNVSTQG-VHLWDLRDR-ILLRKFQG----VTQGQFT---IHSCFG 525
+ T +A G + L+DL+ R + ++ + + +
Sbjct: 493 YISISPSET-YIAA--GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE 549
Query: 526 GANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584
+D VA+GS D ++I+ VKR I L+ H V+ + W + S D +
Sbjct: 550 EIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACI 607
Query: 585 RIW 587
+ W
Sbjct: 608 KRW 610
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 2e-21
Identities = 40/311 (12%), Positives = 90/311 (28%), Gaps = 45/311 (14%)
Query: 295 QVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
+ + V +FSPD G + T D + +D + + K +E V
Sbjct: 200 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK----SGEFLKYIEDDQEPVQGG 255
Query: 354 AWSPDS--SHLLVVGPEDCHELWVWNIETELLRVKLN---HSPEDSLTSCSWNRDGTKFV 408
++ S D + VW++ T K + +G +
Sbjct: 256 IFALSWLDSQKFATVGAD-ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR-II 313
Query: 409 CGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLA-ADTHHRIRTYNFEHLT 464
+ G ++ +VL + G + L + L RI ++ +
Sbjct: 314 SLSLDGTLNFYELGHDEVLKTISGHNKGITAL-----TVNPLISGSYDGRIMEWS----S 364
Query: 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQF--TIH 521
S + ++S + +S + + +T+ +F
Sbjct: 365 SSMHQDHSNLIVSLDNSKAQEYSS--ISWDDTLKVNG------------ITKHEFGSQPK 410
Query: 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-TRTVSCVAWNPVYHQMIASVSD 580
N F A + D + I I ++ + + ++ N V + +
Sbjct: 411 VASA-NNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV-AVGLEEGNT 468
Query: 581 DCTVRIWGPHL 591
++ +
Sbjct: 469 IQVFKLSDLEV 479
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 5e-16
Identities = 16/128 (12%), Positives = 46/128 (35%), Gaps = 17/128 (13%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
+ + + SP +A G ++++D+ + + + T + +
Sbjct: 481 FDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ--SREVKTSR-WAFRTSKINAI 537
Query: 354 AWSPDSSH---------LLVVGPEDCHELWVWNIET--ELLRVKLNHSPEDSLTSCSWNR 402
+W P L+ G D + +++++++ ++++ H D + + W
Sbjct: 538 SWKPAEKGANEEEIEEDLVATGSLDTN-IFIYSVKRPMKIIKALNAHK--DGVNNLLWET 594
Query: 403 DGTKFVCG 410
T G
Sbjct: 595 PSTLVSSG 602
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-15
Identities = 29/257 (11%), Positives = 64/257 (24%), Gaps = 52/257 (20%)
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET---ELLRVKLNHSPEDSLTSC--- 398
+L++ P ++ + + + + H S+ +
Sbjct: 16 TQRNFTTHLSYDPTTNAI-AYPCGKSAFVRCLDDGDSKVPPVVQFTGH--GSSVVTTVKF 72
Query: 399 SWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRT 457
S + G G V +W +
Sbjct: 73 SPIKGSQYLCSG-----------------DESGKVI---VW-----------GWTFDKES 101
Query: 458 YNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVT 514
+ E S P+ + + RL ++ L + G +
Sbjct: 102 NSVEVNVKSEFQVLAGPISDISWDFEGR-RLCVVGEGRDNFGVFISWDSGNSLGEVSGHS 160
Query: 515 QGQFTIHSC-FGGANQDFVASGSEDGKVYIWHV---KRELPIATLSGHTRTVSCVAWNPV 570
Q I++C + + +DG V + K T V V ++P
Sbjct: 161 Q---RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD 217
Query: 571 YHQMIASVSDDCTVRIW 587
+ + +V D + +
Sbjct: 218 SGEFVITVGSDRKISCF 234
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 6e-05
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
+ LN H D V + L + D + W+V
Sbjct: 578 KALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 7e-29
Identities = 62/331 (18%), Positives = 97/331 (29%), Gaps = 82/331 (24%)
Query: 288 EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD---PVTFTCQHRKTLE 344
+F H + + P LA GS D+TV IW + TF +E
Sbjct: 45 DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE 104
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-----ELLRVKLNHSPEDSLTSCS 399
GH V +AWS D + L D +W+W + E + V HS +
Sbjct: 105 GHENEVKGVAWSNDGYY-LATCSRD-KSVWIWETDESGEEYECISVLQEHS--QDVKHVI 160
Query: 400 WNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTY 458
W+ S++ VR +W D +
Sbjct: 161 WHPSEALLASS-----------------SYDDTVR---IWKDYDDDWEC-------VAVL 193
Query: 459 NFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQGV 513
N H + V S D T+ + L S T V +W + + V
Sbjct: 194 N-GH---------EGTVWSSDFDKTEGVFRL-CSGSDDST--VRVWKYMGDDEDDQQEWV 240
Query: 514 TQGQ-FTIHSCFGGANQDFV-----------ASGSEDGKVYIWHVK----RELPIATLSG 557
+ +H V AS DG + ++ + L
Sbjct: 241 CEAILPDVHK-------RQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCH 293
Query: 558 HTRTVSCVAW-NPVYHQMIASVSDDCTVRIW 587
++ V W ++A+ DD V W
Sbjct: 294 GVYEINVVKWLELNGKTILATGGDDGIVNFW 324
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 5e-18
Identities = 48/275 (17%), Positives = 88/275 (32%), Gaps = 50/275 (18%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE 344
F + ++ H +EV +S DG LAT S+D +V IW+ D + L+
Sbjct: 91 ADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ 150
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV--KLN-HSPEDSLTSCSWN 401
H+ V ++ W P LL D + +W + LN H ++ S ++
Sbjct: 151 EHSQDVKHVIWHPS-EALLASSSYD-DTVRIWKDYDDDWECVAVLNGHE--GTVWSSDFD 206
Query: 402 RDGTKF--VCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTY 458
+ F G S + VR +W
Sbjct: 207 KTEGVFRLCSG-----------------SDDSTVR---VWKYMGDDE-DDQQEWVCEAIL 245
Query: 459 NFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRD-RILLRKFQGVT 514
H V + +A S + +++ D + + +
Sbjct: 246 PDVH---------KRQVYNVAWGFNGLIA----SVGADGVLAVYEEVDGEWKVFAKRALC 292
Query: 515 QGQFTIHS--CFGGANQDFVASGSEDGKVYIWHVK 547
G + I+ + +A+G +DG V W ++
Sbjct: 293 HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 2e-16
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ L + +++W FS LATGS D + + V FT H + +A
Sbjct: 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVA 65
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIET--------ELLRVKLNHSPEDSLTSCSWNRDGT 405
W P +S L G D + +W E +LL + H E+ + +W+ DG
Sbjct: 66 WRPHTSL-LAAGSFD-STVSIWAKEESADRTFEMDLLAIIEGH--ENEVKGVAWSNDGY 120
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 1e-13
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 530 DFVASGSEDGKVYIWHVKRE----LPIATLSGHTRTVSCVAWNPVYH-QMIASVSDDCTV 584
+A+GS D K+ + VK + + + + H + + VAW P H ++A+ S D TV
Sbjct: 25 GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP--HTSLLAAGSFDSTV 82
Query: 585 RIW 587
IW
Sbjct: 83 SIW 85
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 8e-13
Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW- 355
+ H +V+ + +GL +A+ D + +++ + ++ L + + W
Sbjct: 246 PDVHKRQVYNVAWGFNGL-IASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWL 304
Query: 356 SPDSSHLLVVGPEDCHELWVWNIET 380
+ +L G +D + W++E
Sbjct: 305 ELNGKTILATGGDDGI-VNFWSLEK 328
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 23/107 (21%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQD--FVASGSEDGKVYIWHVK 547
+ L ++ F + T H + +A+GS D V IW +
Sbjct: 36 IKLVSVKYD----DFTLIDVLDETAHKKAIRSVAW---RPHTSLLAAGSFDSTVSIWAKE 88
Query: 548 -------RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+A + GH V VAW+ +A+ S D +V IW
Sbjct: 89 ESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIW 134
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 5/36 (13%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
I +L + + ++ ++A+ S D +++
Sbjct: 7 IKSLKLYKEKIWSFDFSQ---GILATGSTDRKIKLV 39
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 7e-29
Identities = 55/335 (16%), Positives = 98/335 (29%), Gaps = 96/335 (28%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L H +V D K+A+ S+D TV +W D + + +
Sbjct: 12 ATLKGHDQDVRDVVAVDDS-KVASVSRDGTVRLWSKD----DQWLGTVVYTGQGFLNSVC 66
Query: 355 WSPDSSHLLVVGPEDC--HELWVWNIET-ELLRVKLNH---------SPEDSLTSCSWNR 402
+ + LL+ G +D + + ++ + L + H + S SW
Sbjct: 67 YDSE-KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQD-GVVISGSW-- 122
Query: 403 DGTKFVCGGIRGQFYQCDI--EGQVLDSWEG--VRVNCLWCRS-DGKSVLAA-------- 449
D T + + EG ++ + + V S L A
Sbjct: 123 DKT------AK-------VWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKL 169
Query: 450 -DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRD 503
I+T++ H + V + +S + L D+
Sbjct: 170 WQNDKVIKTFSGIH---------NDVVRHLAVVDDGHF----ISCSNDGL--IKLVDMHT 214
Query: 504 RILLRKFQGVTQGQFTIHSCFGGANQDFV-----------ASGSEDGKVYIWHVKRELPI 552
+LR ++G H FV S ED V IW +
Sbjct: 215 GDVLRTYEG--------HE-------SFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLK 259
Query: 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
++ ++ V + I S D VRI+
Sbjct: 260 QVITLPAISIWSVDCMS--NGDIIVGSSDNLVRIF 292
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 8e-13
Identities = 49/267 (18%), Positives = 83/267 (31%), Gaps = 41/267 (15%)
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLT 396
Q TL+GH V + DS + D + +W+ + + L + L
Sbjct: 9 QLSATLKGHDQDVRDVVAVDDS--KVASVSRD-GTVRLWSKDDQWLGTVVYTGQ--GFLN 63
Query: 397 SCSWNRDGTKFVCGG----IRGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAA- 449
S ++ + + GG I G L + G V L DG + +
Sbjct: 64 SVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSL-SFQDGVVISGSW 122
Query: 450 -------DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST-QGVHLWDL 501
+ L + V + + L S + + LW
Sbjct: 123 DKTAKVWKEGSLVYN----------LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN 172
Query: 502 RDRILLRKFQGVTQGQFTIHS-CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR 560
+++ F G+ + S S DG + + + + T GH
Sbjct: 173 DK--VIKTFSGIHND--VVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRTYEGHES 226
Query: 561 TVSCVAWNPVYHQMIASVSDDCTVRIW 587
V C+ P + I S +D TVRIW
Sbjct: 227 FVYCIKLLP--NGDIVSCGEDRTVRIW 251
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 1e-12
Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ H V+ K P+G + + +D TV IW + ++ + + + +
Sbjct: 219 RTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKE----NGSLKQVITLPAISIWSVD 273
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETE 381
+ ++VG D + + +++ E
Sbjct: 274 CMSNGD--IIVGSSD-NLVRIFSQEKS 297
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 4e-11
Identities = 28/123 (22%), Positives = 41/123 (33%), Gaps = 15/123 (12%)
Query: 292 ETTQVLNDHCDEVWFCK-FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLG 349
L H VW K S K T S D T+ +W + KT G H
Sbjct: 133 SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ------NDKVIKTFSGIHNDV 186
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFV 408
V +LA D + D + + ++ T ++LR H + +G V
Sbjct: 187 VRHLAVVDDGH--FISCSND-GLIKLVDMHTGDVLRTYEGHE--SFVYCIKLLPNG-DIV 240
Query: 409 CGG 411
G
Sbjct: 241 SCG 243
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 3e-10
Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
QV+ +W +G + GS D V I+ + ++G
Sbjct: 260 QVITLPAISIWSVDCMSNG-DIIVGSSDNLVRIFSQE--KSRWASEDEIKGELRSG 312
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-09
Identities = 22/114 (19%), Positives = 34/114 (29%), Gaps = 27/114 (23%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRE 549
V L+ L G H F V SGS D +W
Sbjct: 86 VPLFATSGEDPLYTLIG--------HQGNVCSLSFQD---GVVISGSWDKTAKVWKEGSL 134
Query: 550 LPIATLSGHTRTV---SCVAWNPVYHQMIASVSDDCTVRIW--GPHLNTNKSPH 598
+ L H +V V+++ + S D T+++W + T H
Sbjct: 135 V--YNLQAHNASVWDAKVVSFSE---NKFLTASADKTIKLWQNDKVIKTFSGIH 183
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 48/328 (14%), Positives = 94/328 (28%), Gaps = 84/328 (25%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ N H + + G ++AT S D T+ I++V+ T TL GH V +
Sbjct: 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID--TLTGHEGPVWRVD 60
Query: 355 WSPDS-SHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW--NRDGTKFVCG 410
W+ +L D + +W E ++ ++ S+ S W + G +
Sbjct: 61 WAHPKFGTILASCSYDGK-VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVA 119
Query: 411 GIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
SDGK + F+ +
Sbjct: 120 S-----------------------------SDGK----------VSVVEFK--ENGTTSP 138
Query: 471 E-----DHPVMS--FTIDATDRLALLNVSTQG-----------VHLWDL----RDRILLR 508
V S + + N + + V +W + +L
Sbjct: 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 198
Query: 509 KFQGVTQGQFTIHS-CF---GGANQDFVASGSEDGKVYIWHV-----KRELPIATLSGHT 559
+G + + + ++AS S+D IW + +
Sbjct: 199 TLEGHSD---WVRDVAWSPTVLLRS-YMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 254
Query: 560 RTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ +W+ ++A D V +W
Sbjct: 255 DVLWRASWSLS-GNVLALSGGDNKVTLW 281
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 9e-15
Identities = 31/142 (21%), Positives = 47/142 (33%), Gaps = 24/142 (16%)
Query: 291 CETTQVLNDHCDEVWFCKFSP-------------DGLKLATGSKDTTVIIWDVDPVTFTC 337
+ +++ H V ++P + K TG D V IW + T
Sbjct: 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194
Query: 338 QHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETE------LLRVKLNH 389
TLEGH+ V +AWSP + +D +W + E L +
Sbjct: 195 VLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CIIWTQDNEQGPWKKTLLKEEKF 253
Query: 390 SPEDSLTSCSWNRDGTKFVCGG 411
D L SW+ G G
Sbjct: 254 P--DVLWRASWSLSGNVLALSG 273
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 3e-13
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 291 CETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL 348
V H V +++P G L S D V + + ++ H +
Sbjct: 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFK--ENGTTSPIIIDAHAI 146
Query: 349 GVAYLAWSPDSSH 361
GV +W+P +
Sbjct: 147 GVNSASWAPATIE 159
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 14/78 (17%)
Query: 532 VASGSEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYH------------QMIAS 577
+ S DGKV + K + H V+ +W P + +
Sbjct: 116 LLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 175
Query: 578 VSDDCTVRIWGPHLNTNK 595
D V+IW + +
Sbjct: 176 GGADNLVKIWKYNSDAQT 193
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 9e-08
Identities = 12/54 (22%), Positives = 16/54 (29%), Gaps = 3/54 (5%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH 346
T D +W +S G LA D V +W + E H
Sbjct: 246 TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK---ENLEGKWEPAGEVH 296
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + H + + Y + +A+ S D T++I+
Sbjct: 2 VVIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIF 36
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-28
Identities = 45/332 (13%), Positives = 94/332 (28%), Gaps = 74/332 (22%)
Query: 295 QVLNDHCDEVWFCKFSPDGLK-LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
Q + P +A GSK +++W+ G + L
Sbjct: 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFG--IKDKPTFIKGIGAGGSITGL 170
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGI 412
++P +++ + + + + +LRV + + S + V G
Sbjct: 171 KFNPLNTNQFYASSMEGT-TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN 229
Query: 413 RGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
G +++G+ L + +V + LA T S
Sbjct: 230 VGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLA---------------TASV--- 271
Query: 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQ 529
D T V +WDLR F + +++ CF +
Sbjct: 272 ----------DQT------------VKIWDLRQVRGKASFLYSLPHRHPVNAACF---SP 306
Query: 530 D--FVASGSEDGKVYIWHVKRELPIATLSGHTR------TVSCVAWNPVYH--------- 572
D + + + ++ ++ + L H T AW+P Y+
Sbjct: 307 DGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPD 366
Query: 573 --QMIASVSDDCTVRIW----GPHLNTNKSPH 598
+ + T+ ++ G + P
Sbjct: 367 PNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE 398
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 9e-24
Identities = 42/321 (13%), Positives = 90/321 (28%), Gaps = 72/321 (22%)
Query: 291 CETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349
T + KF+P + + S + T + D + + + +
Sbjct: 154 KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK--GNILRVFASSDTINIW 211
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409
L S S +V G + + + N++ + L H +T + N F+
Sbjct: 212 FCSLDVSASSRM-VVTGDNVGN-VILLNMDGKELWNLRMHK--KKVTHVALNPCCDWFLA 267
Query: 410 GGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL 468
S + V+ +W + Y+ H
Sbjct: 268 TA----------------SVDQTVK---IWDLRQVRGK-------ASFLYSLPH------ 295
Query: 469 LQEDHPVMS--FTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523
HPV + F+ D RL +T + ++ F +
Sbjct: 296 ---RHPVNAACFSPDGA-RLL----TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTP 347
Query: 524 FGGA--------------NQDFVASGSEDGK-VYIWHVKRELPIATL-SGHTRTVSCV-A 566
A + +F + + + + ++ + L + +S +
Sbjct: 348 IKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNE 407
Query: 567 WNPVYHQMIASVSDDCTVRIW 587
+NP+ +AS + IW
Sbjct: 408 FNPM-GDTLASAMGY-HILIW 426
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 3e-22
Identities = 40/308 (12%), Positives = 84/308 (27%), Gaps = 92/308 (29%)
Query: 309 FSPDGLKLATGSKDTTV------IIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL 362
+ KL S + + +D + + + LAW P
Sbjct: 79 RTLHQHKLGRASWPSVQQGLQQSFLHTLD----SYRILQKAAPFDRRATSLAWHPTHPST 134
Query: 363 LVVGPEDCHELWVWNIET---ELLRVKLNH---------SPEDS--LTSCSWNRDGTKFV 408
+ VG + ++ +WN + +P ++ + S +GT
Sbjct: 135 VAVGSKG-GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM--EGT--- 188
Query: 409 CGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRS-----DGKSVLAADTHHRIRTYNFEHL 463
R Q D +G +L + +W S + V+ D
Sbjct: 189 ---TRLQ----DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN------------ 229
Query: 464 TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS- 522
V L ++ + L + + +
Sbjct: 230 -----------------VGN------------VILLNMDGK-ELWNLRMHKKK---VTHV 256
Query: 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATL---SGHTRTVSCVAWNPVYHQMIASVS 579
F+A+ S D V IW +++ A+ H V+ ++P + +
Sbjct: 257 ALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD-GARLLTTD 315
Query: 580 DDCTVRIW 587
+R++
Sbjct: 316 QKSEIRVY 323
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 5e-28
Identities = 56/308 (18%), Positives = 103/308 (33%), Gaps = 53/308 (17%)
Query: 292 ETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVD---PVTFTCQHRKTLEGHT 347
+ ++ H V + P + +A+GS+D TV++W++ V + TLEGHT
Sbjct: 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131
Query: 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTK 406
V +AW P + ++L+ D + + VW++ T + D++ S W+RDG
Sbjct: 132 KRVGIVAWHPTAQNVLLSAGCD-NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190
Query: 407 FVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465
+ VR + G V D H
Sbjct: 191 ICTS-----------------CRDKRVR---VIEPRKGTVVAEKDRPH------------ 218
Query: 466 SNLLQEDHPVMSFTIDATDRLA---LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522
E + + ++ +S + V LWD + Q + +
Sbjct: 219 -----EGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273
Query: 523 CFGGANQDFVASGSEDGKVYIWHVKRELP-IATLSGHTRTVSC--VAWNPVYHQMIASVS 579
F G D + + + E P + LS + S + + P + V+
Sbjct: 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP---KRGLEVN 330
Query: 580 DDCTVRIW 587
R +
Sbjct: 331 KCEIARFY 338
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 4e-12
Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
T + H D ++ +S DG + T +D V + + + G
Sbjct: 166 AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR----KGTVVAEKDRPHEGT 221
Query: 351 --AYLAWSPDSSHLLVVGPEDC--HELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGT 405
+ + + +L G ++ +W+ + E + ++ D
Sbjct: 222 RPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTN 280
Query: 406 KFVCGG 411
G
Sbjct: 281 IVYLCG 286
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 2e-11
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRE 549
V +W++ D L+ + H+ + Q+ + S D + +W V
Sbjct: 106 VMVWEIPDGGLVLPLREPVI-TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG 164
Query: 550 LPIATLS--GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590
+ TL H T+ V W+ +I + D VR+ P
Sbjct: 165 AAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPR 206
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 510 FQGVTQGQFTIHSCFGGANQDFVA-----SGSEDGKVYIWHVKRELP--IATLSGHTRTV 562
++ V Q T S F N F+A SG V + + + GHT V
Sbjct: 25 YEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPV 84
Query: 563 SCVAWNPVYHQMIASVSDDCTVRIW 587
+AW P +IAS S+DCTV +W
Sbjct: 85 LDIAWCPHNDNVIASGSEDCTVMVW 109
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 6e-28
Identities = 79/319 (24%), Positives = 126/319 (39%), Gaps = 61/319 (19%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
++ +VL H D V C G ++ +GS D T+ +W T + +TL GHT GV
Sbjct: 108 LKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAV----TGKCLRTLVGHTGGV 162
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNH---------SPEDSLTSCSW 400
+ +++ G D L VWN ET E + H + S S
Sbjct: 163 WSSQMRDN---IIISGSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHE-KRVVSGS- 216
Query: 401 NRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRT 457
RD T +R DIE GQ L G V C+ DG+ V++ ++
Sbjct: 217 -RDAT------LR----VWDIETGQCLHVLMGHVAAVRCVQ--YDGRRVVSGAYDFMVKV 263
Query: 458 YNFEHLTDSNLLQE-DHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQG--- 512
++ E T + LQ + V S D + + S + +WD+ + G
Sbjct: 264 WDPETETCLHTLQGHTNRVYSLQFDGI-HVV--SGSLDTSIRVWDVETGNCIHTLTGHQS 320
Query: 513 -VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---HTRTVSCVAWN 568
+ + + + SG+ D V IW +K + TL G H V+C+ +N
Sbjct: 321 LTSGMEL---------KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 371
Query: 569 PVYHQMIASVSDDCTVRIW 587
+ + SDD TV++W
Sbjct: 372 K---NFVITSSDDGTVKLW 387
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 4e-22
Identities = 64/311 (20%), Positives = 105/311 (33%), Gaps = 81/311 (26%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
L H V ++ +GS+D T+ +WD++ T Q L GH V +
Sbjct: 192 IHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE----TGQCLHVLMGHVAAVRCV 245
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412
+ +V G D + VW+ ET L H+ + + S + DG V G
Sbjct: 246 QYDGR---RVVSGAYD-FMVKVWDPETETCLHTLQGHT--NRVYSLQF--DGIHVVSG-- 295
Query: 413 RGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
S + +R +W D +T + I T H
Sbjct: 296 ---------------SLDTSIR---VW---D------VETGNCIHTL-TGH--------- 318
Query: 472 DHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFG 525
+ + L VS T V +WD++ L+ QG + Q + F
Sbjct: 319 QSLTSGMELKD-NIL----VSGNADST--VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 371
Query: 526 GANQDFVASGSEDGKVYIWHVK-----RELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580
+FV + S+DG V +W +K R L G V + + + A S
Sbjct: 372 K---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSR 427
Query: 581 DCT----VRIW 587
+ T + +
Sbjct: 428 NGTEETKLLVL 438
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 2e-14
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL 555
W + + +G + +C + + SGS+D + +W + TL
Sbjct: 100 DTNWRRGELKSPKVLKGHDDH---VITCLQ-FCGNRIVSGSDDNTLKVWSAVTGKCLRTL 155
Query: 556 SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
GHT V +I S S D T+++W
Sbjct: 156 VGHTGGVWSSQMRD---NIIISGSTDRTLKVW 184
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 9e-09
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 11/91 (12%)
Query: 298 NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQH---RKTLEGHTLGVAYLA 354
N H V +F+ + + T S D TV +WD+ T G V +
Sbjct: 359 NKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK--TGEFIRNLVTLESGGSGGVVWRIR 414
Query: 355 WSPDSSHLLVVGPED---CHELWVWNIETEL 382
S VG + +L V + + ++
Sbjct: 415 ASNTKLV-CAVGSRNGTEETKLLVLDFDVDM 444
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 8/106 (7%)
Query: 281 DHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR 340
+ L ++ + L+ +V F K A + W +
Sbjct: 56 NLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRIDTNWRRG----ELKSP 111
Query: 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRV 385
K L+GH V + +V G +D + L VW+ T + LR
Sbjct: 112 KVLKGHDDHVIT-CLQFCGNR-IVSGSDD-NTLKVWSAVTGKCLRT 154
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTT----VIIWDVDP 332
T VW + S L A GS++ T +++ D D
Sbjct: 399 VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 16/122 (13%)
Query: 475 VMSFTIDATDRLALLNVST--------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGG 526
V+SF ++ D L + ++ + +
Sbjct: 30 VLSF-LEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSP 88
Query: 527 ANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV-SCVAWNPVYHQMIASVSDDCTVR 585
A + W L GH V +C+ + I S SDD T++
Sbjct: 89 WK---SAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCG---NRIVSGSDDNTLK 142
Query: 586 IW 587
+W
Sbjct: 143 VW 144
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 6e-27
Identities = 41/324 (12%), Positives = 90/324 (27%), Gaps = 62/324 (19%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ H D V + G +AT S D + ++ +D T + + H + +
Sbjct: 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAID 64
Query: 355 WSPDS-SHLLVVGPEDCHELWVWNIETELLRVKLNHSP--------EDSLTSCSWNRD-- 403
W+ ++ D + +W + + + SL S +
Sbjct: 65 WASPEYGRIIASASYD-KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHL 123
Query: 404 GTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEH 462
G K C +G +R L+ + + + ++
Sbjct: 124 GLKLACL-----------------GNDGILR---LYDALEPSDLRSWTLTSEMK------ 157
Query: 463 LTDSNLLQEDHPVMS--FTIDATDRLALLNVST---QGVHLWDLRDR--ILLRKFQGVTQ 515
+ + L + Q + +D + K G
Sbjct: 158 VLSIPPANHLQSDFCLSWCPSRFSPEKL--AVSALEQAIIYQRGKDGKLHVAAKLPGHKS 215
Query: 516 GQFTIHS-CF---GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP-V 570
I S + G +A+G +DG++ I+ + +L + L+ + ++
Sbjct: 216 L---IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL--SPLASEESLTNSNMFDNSA 270
Query: 571 YHQMIASVSDDC----TVRIWGPH 590
M A D +
Sbjct: 271 DVDMDAQGRSDSNTEEKAELQSNL 294
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 6e-22
Identities = 51/342 (14%), Positives = 100/342 (29%), Gaps = 70/342 (20%)
Query: 292 ETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHR-----KTLE 344
E + H + ++ G +A+ S D TV +W+ DP C R TL
Sbjct: 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN 107
Query: 345 GHTLGVAYLAWSPDSS-HLLVVGPEDC----------HELWVWNIETELLRVKLNHSP-E 392
+ + ++P L D +L W + +E+ + + +
Sbjct: 108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167
Query: 393 DSLTSCSWNRD---GTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAA 449
S SW K + + + DGK +AA
Sbjct: 168 QSDFCLSWCPSRFSPEKLAVSA-------LE---------QAII---YQRGKDGKLHVAA 208
Query: 450 --DTH-HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506
H IR+ ++ ++ + + + D + ++ + ++
Sbjct: 209 KLPGHKSLIRSISWAP----SIGRWYQLIATGCKDGR------------IRIFKITEK-- 250
Query: 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK----VYIWHVKRELPIATLSGHTRTV 562
L + A G D + + ++ H V
Sbjct: 251 LSPLASEESLTNSNMFDNSADVD-MDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309
Query: 563 SCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLASSLT 604
V+WN +++S DD VR+W + S +T
Sbjct: 310 WSVSWNL-TGTILSSAGDDGKVRLW--KATYSNEFKCMSVIT 348
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-26
Identities = 51/340 (15%), Positives = 97/340 (28%), Gaps = 84/340 (24%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ N H + + G +LAT S D T+ I++V+ T TL GH V +
Sbjct: 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID--TLTGHEGPVWRVD 60
Query: 355 WSPDS-SHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSW--NRDGTKFVCG 410
W+ +L D + +W E ++ ++ S+ S W + G +
Sbjct: 61 WAHPKFGTILASCSYDGK-VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA 119
Query: 411 GIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
SDGK + F+ +
Sbjct: 120 S-----------------------------SDGK----------VSVVEFK--ENGTTSP 138
Query: 471 E-----DHPVMS--FTIDATDRLALLNVSTQG-----------VHLWDL----RDRILLR 508
V S + + N + + V +W + +L
Sbjct: 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 198
Query: 509 KFQGVTQGQFTIHS-CF---GGANQDFVASGSEDGKVYIWHV-----KRELPIATLSGHT 559
+G + + + ++AS S+D IW + +
Sbjct: 199 TLEGHSD---WVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 254
Query: 560 RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHL 599
+ +W+ ++A D V +W +L P
Sbjct: 255 DVLWRASWSLS-GNVLALSGGDNKVTLWKENLEGKWEPAG 293
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 77.7 bits (191), Expect = 4e-15
Identities = 41/259 (15%), Positives = 73/259 (28%), Gaps = 30/259 (11%)
Query: 291 CETTQVLNDHCDEVWFCKFSP-------------DGLKLATGSKDTTVIIWDVDPVTFTC 337
+ +++ H V ++P + K TG D V IW + T
Sbjct: 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194
Query: 338 QHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETE------LLRVKLNH 389
TLEGH+ V +AWSP L +D +W + E L +
Sbjct: 195 VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWTQDNEQGPWKKTLLKEEKF 253
Query: 390 SPEDSLTSCSWNRDGTKFVCGG----IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKS 445
D L SW+ G G + ++ ++EG+ + E + S
Sbjct: 254 P--DVLWRASWSLSGNVLALSGGDNKVT--LWKENLEGKWEPAGEVHQGGGGSGGGGATS 309
Query: 446 VLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505
F D + + S + +
Sbjct: 310 KEFDGPCQNEIDLLFSECNDEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDIVGKSGV 369
Query: 506 LLRKFQGVTQGQFTIHSCF 524
+++ Q +F +
Sbjct: 370 SIKRLPTELQRKFLFDDVY 388
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 4e-13
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 291 CETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL 348
V H V +++P G L S D V + + ++ H +
Sbjct: 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK--ENGTTSPIIIDAHAI 146
Query: 349 GVAYLAWSPDSSH 361
GV +W+P +
Sbjct: 147 GVNSASWAPATIE 159
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 9e-07
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + H + + Y + +A+ S D T++I+
Sbjct: 2 VVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIF 36
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 47/314 (14%), Positives = 95/314 (30%), Gaps = 59/314 (18%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLAT----GSKDTTVIIWDVDPVTFTCQHRKTLEGHT--L 348
+ V+ CK+ P K T + ++++ + + +E
Sbjct: 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQ--HGDLKLLREIEKAKPIK 69
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPE----DSLTSCSWNR 402
+ A S +L G L +WN+E + H D +
Sbjct: 70 CGTFGATSLQQRYL-ATGDFG-GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE 127
Query: 403 DGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFE 461
+ V G S +G V+ +W +A N E
Sbjct: 128 GAPEIVTG-----------------SRDGTVK---VWDPRQKDDPVA----------NME 157
Query: 462 HLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTI 520
+ N + +R+ + G + L+DLR+ LR + G ++
Sbjct: 158 PVQGENKRDCWTVAFGNAYNQEERV-VCAGYDNGDIKLFDLRNM-ALRWETNIKNGVCSL 215
Query: 521 HSCFG--GANQDFVASGSEDGKVYIW-----HVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
F + + + + S +GK +++ H + + H TV V P +
Sbjct: 216 --EFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRE 273
Query: 574 MIASVSDDCTVRIW 587
+ + + +W
Sbjct: 274 LFLTAGGAGGLHLW 287
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 48/325 (14%), Positives = 101/325 (31%), Gaps = 87/325 (26%)
Query: 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHT------LGVAYLAWS 356
F S LATG + IW+++ + +++GH G+ L
Sbjct: 71 GTFGATSLQQRYLATGDFGGNLHIWNLE----APEMPVYSVKGHKEIINAIDGIGGLGIG 126
Query: 357 PDSSHLLVVGPEDCHELWVWNIET-----ELLRVKLNHSPEDSL---TSCSWNRDGTKFV 408
+ +V G D + VW+ + + D ++N++
Sbjct: 127 EGAPE-IVTGSRDGT-VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVC 184
Query: 409 CGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN 467
G G ++ L+ + L +T+
Sbjct: 185 AG-----------------YDNGDIK---LFDLRNMA--LRWETNI-------------- 208
Query: 468 LLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVT-QG-QFTIHS 522
+ V S D D V+T H++D+R + + F V+ + + T+
Sbjct: 209 ----KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQ 264
Query: 523 -CFGGANQDFVASGSEDGKVYIWHVKREL-------------------PIATLSGHTRTV 562
N++ + G +++W + + + ++ T+ +
Sbjct: 265 VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324
Query: 563 SCVAWNPVYHQMIASVSDDCTVRIW 587
S + W+P + S D TVR+
Sbjct: 325 SSLDWSPDKRGLCVCSSFDQTVRVL 349
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 7e-20
Identities = 32/264 (12%), Positives = 79/264 (29%), Gaps = 51/264 (19%)
Query: 340 RKTLEGHTLGVAYLAWSPDSSHLLVVG--PEDCHELWVWNIET-ELLRVKLNHSPE--DS 394
+G V W P S+ + +G + ++ I+ +L ++ +
Sbjct: 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKC 70
Query: 395 LTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHH 453
T + + G + G + +W + + + H
Sbjct: 71 GTFGATSLQQRYLATG-----------------DFGGNLH---IWNLEAPEMPVYSVKGH 110
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDR----ILLR 508
+ + + A + S G V +WD R + +
Sbjct: 111 ----------KEIINAIDGIGGLGIGEGAP-EIV--TGSRDGTVKVWDPRQKDDPVANME 157
Query: 509 KFQGVTQGQFTIHSCFGGA-NQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCV 565
QG + FG A NQ+ V +G ++G + ++ ++ + V +
Sbjct: 158 PVQGENKRDCW-TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR-WETNIKNGVCSL 215
Query: 566 AWNP--VYHQMIASVSDDCTVRIW 587
++ + + + S + ++
Sbjct: 216 EFDRKDISMNKLVATSLEGKFHVF 239
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 5e-14
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 17/102 (16%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDP---------------VTFTCQ 338
H VW + P +L T + +W + V +
Sbjct: 253 VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVS 312
Query: 339 HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380
+ + T ++ L WSPD L V D + V +
Sbjct: 313 LLQNVTLSTQPISSLDWSPDKRGLCVCSSFD-QTVRVLIVTK 353
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 6e-14
Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 24/140 (17%)
Query: 295 QVLNDHCDEVWFCKFSPDGL---KLATGSKDTTVIIWDVDPVTFTC-QHRKTLEGHTLGV 350
+ + + V +F + KL S + ++D+ T + + H V
Sbjct: 203 RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV 262
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP------------------E 392
+ P + L + L +W E + R K +
Sbjct: 263 WQVRHLPQNRELFLTAGGA-GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321
Query: 393 DSLTSCSWNRDGTK-FVCGG 411
++S W+ D VC
Sbjct: 322 QPISSLDWSPDKRGLCVCSS 341
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 268 KVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLA-TGSKDTTVI 326
K + ++ + + Q + + +SPD L S D TV
Sbjct: 288 KYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347
Query: 327 IWDV 330
+ V
Sbjct: 348 VLIV 351
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 45/325 (13%), Positives = 93/325 (28%), Gaps = 100/325 (30%)
Query: 295 QVLNDHCD-----EVWFCKFSPDG----LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG 345
++L + D + C ++ D LA + I + T Q K G
Sbjct: 58 RLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI----TMQCIKHYVG 113
Query: 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLN---HSPEDSLTSCSWN 401
H + L + P +LL+ +D H L +WNI+T L+ + H D + S ++
Sbjct: 114 HGNAINELKFHPRDPNLLLSVSKD-HALRLWNIQTDTLVAIFGGVEGHR--DEVLSADYD 170
Query: 402 RDGTKFVCGG----IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRT 457
G K + G ++ LW + + + A +
Sbjct: 171 LLGEKIMSCGMDHSLK-----------------------LWRINSKRMMNAIKESY---- 203
Query: 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517
+ + +Q +H D R
Sbjct: 204 -------------------DYNPN----KTNRPFISQKIHFPDFSTR------DIHRNYV 234
Query: 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP--------------IATLSGHTRTVS 563
+ + G D + S S + + W + + +
Sbjct: 235 DCV--RWLG---DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIW 289
Query: 564 CVAWNP-VYHQMIASVSDDCTVRIW 587
+ ++ + +M+A + + +W
Sbjct: 290 YMRFSMDFWQKMLALGNQVGKLYVW 314
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 49/304 (16%), Positives = 102/304 (33%), Gaps = 61/304 (20%)
Query: 295 QVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQH-RKTLEGHTLGVAY 352
+ H + + KF P D L + SKD + +W++ T T +EGH V
Sbjct: 109 KHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ--TDTLVAIFGGVEGHRDEVLS 166
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+ + + D H L +W I + ++ +N + T
Sbjct: 167 ADYDLLGEKI-MSCGMD-HSLKLWRINSKRMMNAIKESY--------DYNPNKTNRPFIS 216
Query: 412 IRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
+ F D + ++ V+C+ R G +L+ + I + + D
Sbjct: 217 QKIHFP--DFSTRDIHRNY----VDCV--RWLGDLILSKSCENAIVCWKPGKMEDDIDKI 268
Query: 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGG-ANQ 529
+ + +L +F + + F Q
Sbjct: 269 KPSE---------------------------SNVTILGRFDYSQCDIWYM--RFSMDFWQ 299
Query: 530 DFVASGSEDGKVYIWHVK----RELPIATLSGHTR--TVSCVAWNPVYHQMIASVSDDCT 583
+A G++ GK+Y+W ++ + TL+ H + +++ ++ +V DD +
Sbjct: 300 KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD-SSILIAVCDDAS 358
Query: 584 VRIW 587
+ W
Sbjct: 359 IWRW 362
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 5e-20
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 14/132 (10%)
Query: 469 LQEDH--PVMS--FTIDATDRLALLNVSTQG---VHLWDLRDRILLRKFQGVTQGQFTIH 521
L+EDH P+ F + + L+ +T G V L++ + +R Q +
Sbjct: 13 LKEDHNQPLFGVQFNWHSKEGDPLV-FATVGSNRVTLYECHSQGEIRLLQSYVDADADEN 71
Query: 522 ------SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575
+ + +A G + I + I GH ++ + ++P ++
Sbjct: 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLL 131
Query: 576 ASVSDDCTVRIW 587
SVS D +R+W
Sbjct: 132 LSVSKDHALRLW 143
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 7e-14
Identities = 42/282 (14%), Positives = 90/282 (31%), Gaps = 55/282 (19%)
Query: 334 TFTCQHRKTLEGHT---LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNH 389
+F C + E H GV + S + L+ + ++ + +R+ ++
Sbjct: 6 SFKCVNS-LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR-VTLYECHSQGEIRLLQSY 63
Query: 390 S---PEDSLTSCSW----NRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCL-W 438
+++ +C+W N G RG + Q + + G +N L +
Sbjct: 64 VDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKF 123
Query: 439 CRSDGKSVLAADTHHRIRTYNFE----HLTDSNLLQEDHPVMS--FTIDATDRLALLNVS 492
D +L+ H +R +N + + V+S + + ++ S
Sbjct: 124 HPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE-KIM----S 178
Query: 493 -----TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547
+ + LW + + ++ + + N + K++
Sbjct: 179 CGMDHS--LKLWRINSKRMMNAIKE--------SYDY---NPNKTNRPFISQKIHFPDFS 225
Query: 548 RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
T H V CV W +I S S + + W P
Sbjct: 226 ------TRDIHRNYVDCVRWLG---DLILSKSCENAIVCWKP 258
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 6e-13
Identities = 30/263 (11%), Positives = 72/263 (27%), Gaps = 64/263 (24%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
+ H DEV + G K+ + D ++ +W ++ + + ++
Sbjct: 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN----SKRMMNAIKESY----- 203
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412
++P+ ++ + H + T + H + + W G +
Sbjct: 204 -DYNPNKTN-RPFISQKIH---FPDFST--RDI---HR--NYVDCVRW--LGDLILSK-- 247
Query: 413 RGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
S E + W + + S
Sbjct: 248 ---------------SCENAIV---CWKPGKMEDDIDKIKPSESNVTILGRFDYS----- 284
Query: 472 DHPVMS--FTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528
+ F++D ++ L + G +++WDL + H C
Sbjct: 285 QCDIWYMRFSMDFWQKM-LALGNQVGKLYVWDLEVEDPHKAKCTTLTH----HKCGAAIR 339
Query: 529 Q-------DFVASGSEDGKVYIW 544
Q + + +D ++ W
Sbjct: 340 QTSFSRDSSILIAVCDDASIWRW 362
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 1e-12
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 294 TQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG-- 349
+ ++W+ +FS D LA G++ + +WD++ TL H G
Sbjct: 278 LGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAA 337
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWN 377
+ ++S DSS L+ +D +W W+
Sbjct: 338 IRQTSFSRDSSI-LIAVCDD-ASIWRWD 363
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 31/137 (22%)
Query: 293 TTQVLNDHCDEVW---FCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHT- 347
+ DH ++ F S +G L + V +++ + + L+ +
Sbjct: 10 VNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECH----SQGEIRLLQSYVD 65
Query: 348 ----LGVAYLAWSPDSSH---LLVVGPEDCHELWVWNIETELLRVKLN-H---------S 390
AW+ DS+ LL V + + N T H
Sbjct: 66 ADADENFYTCAWTYDSNTSHPLLAVAGSRGI-IRIINPITMQCIKHYVGHGNAINELKFH 124
Query: 391 PEDS--LTSCSWNRDGT 405
P D L S S D
Sbjct: 125 PRDPNLLLSVSK--DHA 139
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 7/32 (21%), Positives = 10/32 (31%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV 330
+ FS D L D ++ WD
Sbjct: 333 KCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 6e-25
Identities = 52/323 (16%), Positives = 99/323 (30%), Gaps = 82/323 (25%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS 356
D V K+S DG L+ G + V I+DV+ + +T+ GH V L+W
Sbjct: 130 ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE----SQTKLRTMAGHQARVGCLSW- 184
Query: 357 PDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG--- 411
+ H+L G + ++ + HS + +W DG + GG
Sbjct: 185 --NRHVLSSGSRSGA-IHHHDVRIANHQIGTLQGHS--SEVCGLAWRSDGLQLASGGNDN 239
Query: 412 -IRGQFYQCDI----EGQVLDSWEG--VRVNCL-WCRSDGKSVLAADTHHRIRTYNFEHL 463
++ I + V + WC ++LA
Sbjct: 240 VVQ-------IWDARSSIPKFTKTNHNAAVKAVAWC-PWQSNLLA--------------- 276
Query: 464 TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS- 522
T+D +H W+ + +Q + S
Sbjct: 277 -----------TGGGTMDKQ------------IHFWNAATGARVNTVDAGSQ----VTSL 309
Query: 523 CFGGANQDFV-ASGSEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYHQMIASVS 579
+ +++ + G D + IW + H V A +P +++++ +
Sbjct: 310 IWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD-GRILSTAA 368
Query: 580 DDCTVRIW----GPHLNTNKSPH 598
D ++ W G H+
Sbjct: 369 SDENLKFWRVYDGDHVKRPIPIT 391
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 2e-22
Identities = 58/316 (18%), Positives = 100/316 (31%), Gaps = 79/316 (25%)
Query: 290 PCETTQVLN--DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-GH 346
+VL+ D+ + L + + + V +W+ D + E
Sbjct: 78 NTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNAD----SGSVSALAETDE 133
Query: 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGT 405
+ VA + WS D S L VG + + ++++E+ LR H + SWN
Sbjct: 134 STYVASVKWSHDGSF-LSVGLGNG-LVDIYDVESQTKLRTMAGHQ--ARVGCLSWN--RH 187
Query: 406 KFVCGGIRGQFYQCDIE--GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFE 461
G G + D+ + + +G V L RSDG LA
Sbjct: 188 VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ-LA------------- 233
Query: 462 HLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521
+ N D V +WD R I H
Sbjct: 234 --SGGN-------------DNV------------VQIWDARSSIPKFTKTN--------H 258
Query: 522 S--------CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573
+ C +N G+ D +++ W+ + T+ + V+ + W+P +
Sbjct: 259 NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS-QVTSLIWSPHS-K 316
Query: 574 MIASV--SDDCTVRIW 587
I S D + IW
Sbjct: 317 EIMSTHGFPDNNLSIW 332
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 7e-17
Identities = 44/290 (15%), Positives = 88/290 (30%), Gaps = 70/290 (24%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLG 349
+ + H V S + L++GS+ + DV H+ TL+GH+
Sbjct: 166 QTKLRTMAGHQARVG--CLSWNRHVLSSGSRSGAIHHHDVR----IANHQIGTLQGHSSE 219
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFV 408
V LAW D L G D + + +W+ + K NH+ ++ + +W + +
Sbjct: 220 VCGLAWRSDGLQL-ASGGND-NVVQIWDARSSIPKFTKTNHN--AAVKAVAWCPWQSNLL 275
Query: 409 CGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL 468
G G + + W + G V D ++ + + S
Sbjct: 276 ATG-GGTMDKQ------------IH---FWNAATGARVNTVDAGSQVTSLIW--SPHSKE 317
Query: 469 LQEDHPVMSFTIDATDRLALLNVSTQG-----VHLWDLRDRILLR--KFQG----VTQGQ 517
+ +ST G + +W L + V
Sbjct: 318 I---------------------MSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVL--- 353
Query: 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LSGHTRTVSCVA 566
+S + +++ + D + W V + + S +
Sbjct: 354 ---YSALS-PDGRILSTAASDENLKFWRVYDGDHVKRPIPITKTPSSSIT 399
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 8e-25
Identities = 52/317 (16%), Positives = 105/317 (33%), Gaps = 88/317 (27%)
Query: 295 QVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPV-TFTCQHRKTLEGHTLGVAY 352
L H V S L + S+D T+I W + ++ +GH+ V
Sbjct: 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQD 70
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+ D ++ + D L +W++ T E + + H + S ++ + + G
Sbjct: 71 CTLTADGAY-ALSASWD-KTLRLWDVATGETYQRFVGHK--SDVMSVDIDKKASMIISGS 126
Query: 412 ----IRGQFYQCDIEGQVLDSWEG--VRVNCL------WCRSDGKSVLAADTHHRIRTYN 459
I+ I+GQ L + G V+ + D ++++A
Sbjct: 127 RDKTIK----VWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISA---------- 172
Query: 460 FEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFT 519
N D V W+L + F G
Sbjct: 173 ------GN-------------DKM------------VKAWNLNQFQIEADFIG------- 194
Query: 520 IHS------CF---GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570
H+ G +AS +DG++ +W++ + + TLS V +A++P
Sbjct: 195 -HNSNINTLTASPDG----TLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPN 248
Query: 571 YHQMIASVSDDCTVRIW 587
+A+ + ++++
Sbjct: 249 -RYWLAAATAT-GIKVF 263
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 3e-19
Identities = 42/303 (13%), Positives = 84/303 (27%), Gaps = 94/303 (31%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
ET Q H +V + +GS+D T+ +W + Q TL GH V+
Sbjct: 98 ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-----KGQCLATLLGHNDWVS 152
Query: 352 YLAWSPDSSH-----LLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGT 405
+ P+ ++ D + WN+ + H+ ++ + + + DGT
Sbjct: 153 QVRVVPNEKADDDSVTIISAGND-KMVKAWNLNQFQIEADFIGHN--SNINTLTASPDGT 209
Query: 406 KFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464
+G + LW + K++ + + F
Sbjct: 210 LIASA-----------------GKDGEIM---LWNLAAKKAMYTLSAQDEVFSLAF---- 245
Query: 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
P +R L + G+ ++ L + L+ + G
Sbjct: 246 --------SP---------NRYWLAAATATGIKVFSLDPQYLVDDLRPEFAG-------- 280
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584
+AW+ Q + + D +
Sbjct: 281 -----------------------------YSKAAEPHAVSLAWSAD-GQTLFAGYTDNVI 310
Query: 585 RIW 587
R+W
Sbjct: 311 RVW 313
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 3e-16
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 15/128 (11%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ H + SPDG +A+ KD +++W++ + TL V
Sbjct: 186 FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA----AKKAMYTLSAQD-EV 240
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET-----ELLRVKLNHSP--EDSLTSCSWNRD 403
LA+SP+ + L + V++++ +L +S E S +W+ D
Sbjct: 241 FSLAFSPN-RYWLAAATATG--IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD 297
Query: 404 GTKFVCGG 411
G G
Sbjct: 298 GQTLFAGY 305
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 77.9 bits (193), Expect = 6e-16
Identities = 58/281 (20%), Positives = 90/281 (32%), Gaps = 78/281 (27%)
Query: 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET------ELLRVKLNH 389
R TLEGH V LA S +LL+ D L W + +R H
Sbjct: 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRD-KTLISWKLTGDDQKFGVPVRSFKGH 64
Query: 390 SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLA 448
S + C+ DG + SW+ +R LW D
Sbjct: 65 S--HIVQDCTLTADGAYALSA-----------------SWDKTLR---LW---D------ 93
Query: 449 ADTHHRIRTYNFE-HLTDSNLLQEDHPVMS--FTIDATDRLALLNVS-----TQGVHLWD 500
T + F H VMS A+ + S T + +W
Sbjct: 94 VATGETYQR--FVGH---------KSDVMSVDIDKKAS-MII----SGSRDKT--IKVWT 135
Query: 501 LRDRILLRKFQG----VTQGQFTIHSCFGGANQD--FVASGSEDGKVYIWHVKRELPIAT 554
++ + L G V+Q + A+ D + S D V W++ + A
Sbjct: 136 IKGQ-CLATLLGHNDWVSQVRV---VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191
Query: 555 LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595
GH ++ + +P +IAS D + +W +L K
Sbjct: 192 FIGHNSNINTLTASPD-GTLIASAGKDGEIMLW--NLAAKK 229
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 5e-06
Identities = 9/44 (20%), Positives = 14/44 (31%)
Query: 287 EEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV 330
++ E +S DG L G D + +W V
Sbjct: 272 DDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 38/313 (12%), Positives = 81/313 (25%), Gaps = 56/313 (17%)
Query: 290 PCETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL 348
+ D + KF+ + +L S + D Q +
Sbjct: 107 NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS--GSVIQVFAKTDSWDY 164
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV 408
+ S +L G L + ++ + + H +T +N +
Sbjct: 165 WYCCVDVSVS-RQMLATGDST-GRLLLLGLDGHEIFKEKLHK--AKVTHAEFNPRCDWLM 220
Query: 409 CGG-----IR------GQFYQCDIEGQVLDSWEGVRVNCL-WCRSDGKSVLAADTHHRIR 456
++ + I + VN + +D +L D + IR
Sbjct: 221 ATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP----VNAAYFNPTDSTKLLTTDQRNEIR 276
Query: 457 TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516
Y+ + + + HP Q H L +
Sbjct: 277 VYSSYDWSKPDQI-IIHP-----------------HRQFQH---------LTPIKATWHP 309
Query: 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT--VSCVAWNPVYHQM 574
+ + G D ++ + I+ + L +S ++P +
Sbjct: 310 MYDL--IVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT-GDV 366
Query: 575 IASVSDDCTVRIW 587
+AS + IW
Sbjct: 367 LASGMGF-NILIW 378
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 36/318 (11%), Positives = 78/318 (24%), Gaps = 87/318 (27%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATG--SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
Q + + S G + I + + + +T V
Sbjct: 23 QKKVGQTSILHYIYKSSLGQSIHAQLRQCLQEPFIRSLK----SYKLHRTASPFDRRVTS 78
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH------------SPEDS--LTSC 398
L W P + VG + + +W+ + + + + ++ L
Sbjct: 79 LEWHPTHPTTVAVGSKGGD-IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137
Query: 399 SWNRDGTKFVCGGIRGQFYQCDIEG---QVLDSWEG--VRVNCLWCRSDGKSVLAADTHH 453
S G + D G QV + C+ + + D+
Sbjct: 138 SI--RGA------TTLR----DFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG 185
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
R+ L L + K +
Sbjct: 186 RLL-----------------------------------------LLGLDGH-EIFKEKLH 203
Query: 514 TQGQFTIHS-CFGGANQDFVASGSEDGKVYIWHVKRELPIATL---SGHTRTVSCVAWNP 569
+ F +A+ S D V +W ++ + H + V+ +NP
Sbjct: 204 KAK---VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNP 260
Query: 570 VYHQMIASVSDDCTVRIW 587
+ + +R++
Sbjct: 261 TDSTKLLTTDQRNEIRVY 278
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 5e-19
Identities = 35/266 (13%), Positives = 74/266 (27%), Gaps = 46/266 (17%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ + S LATG +++ + + H V
Sbjct: 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-----DGHEIFKEKLHKAKV 207
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP--EDSLTSCSWN-RDGTKF 407
+ ++P L+ D + +W++ + E + + +N D TK
Sbjct: 208 THAEFNPRCDWLMATSSVD-ATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKL 266
Query: 408 VCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS 466
+ +R ++ D H + + +
Sbjct: 267 LTT-----------------DQRNEIR---VYSSYDWSKPDQIIIHP-----HRQFQHLT 301
Query: 467 NLLQEDHPVMS--FTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
+ HP+ D LLN + + ++D L+ + + I S
Sbjct: 302 PIKATWHPMYDLIVAGRYPDDQLLLNDK-RTIDIYDANSGGLVHQLRD--PNAAGIISLN 358
Query: 525 GGA---NQDFVASGSEDGKVYIWHVK 547
D +ASG + IW+ +
Sbjct: 359 --KFSPTGDVLASGM-GFNILIWNRE 381
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-24
Identities = 35/320 (10%), Positives = 75/320 (23%), Gaps = 77/320 (24%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353
T V+ +++P+ K A GS + I + + + V L
Sbjct: 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 148
Query: 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP-----------------EDSLT 396
W P+S L G D +++ + + + +P +
Sbjct: 149 DWHPNSVL-LAAGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVH 206
Query: 397 SCSWNRDGTKFVCGG----IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH 452
++ +G++ + L +V +
Sbjct: 207 GVCFSANGSRVAWVSHDSTVC-----------------------LADADKKMAVATLASE 243
Query: 453 HRIRTYNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVSTQGVHLWDLRDRILLRKF 510
P+++ F T+ + L+ F
Sbjct: 244 T-------------------LPLLAVTFI---TESSLVAAGHDCFPVLFTYDSAAGKLSF 281
Query: 511 QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP- 569
G S G + + +L H +VS ++
Sbjct: 282 GGRLDV--PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL--HKNSVSQISVLSG 337
Query: 570 --VYHQMIASVSDDCTVRIW 587
+ D + IW
Sbjct: 338 GKAKCSQFCTTGMDGGMSIW 357
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 3e-22
Identities = 43/326 (13%), Positives = 88/326 (26%), Gaps = 53/326 (16%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
+ + ++ D ++A + V I++ L+ H V + W+PDS
Sbjct: 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--GNKWVQVHELKEHNGQVTGVDWAPDS 64
Query: 360 SHLLVVGPEDCHELWVWNIET---ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG----I 412
+ +V D + +VW ++ + V L + + W + KF G I
Sbjct: 65 NR-IVTCGTDRN-AYVWTLKGRTWKPTLVILRIN--RAARCVRWAPNEKKFAVGSGSRVI 120
Query: 413 RGQFYQCDIEGQVLDSWEGVR--------VNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464
C E + D W V L + + A + R ++
Sbjct: 121 S----ICYFEQEN-DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY--I 173
Query: 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVH---------------------LWDLRD 503
+ + + + + S VH L D
Sbjct: 174 KEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK 233
Query: 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS 563
++ + T + F + VA+G D ++ + G
Sbjct: 234 KMAVATLASETLPLLAV--TFITESS-LVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPK 289
Query: 564 CVAWNPVYHQMIASVSDDCTVRIWGP 589
+ + + D
Sbjct: 290 QSSQRGLTARERFQNLDKKASSEGSA 315
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+A S +SC AWN IA ++ V I+
Sbjct: 1 MAYHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIY 35
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-24
Identities = 44/323 (13%), Positives = 95/323 (29%), Gaps = 64/323 (19%)
Query: 300 HCDEVWFCKFSPDGLK-LATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSP 357
+ + SP L TGS + IW++ + + + V + P
Sbjct: 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIP 121
Query: 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417
+ V +D ++ V + ++ + +
Sbjct: 122 N-FDAFAVSSKD-GQIIVLKVNHYQQESEVKFLNCECIRK-------------------- 159
Query: 418 QCDIEGQVLDSWEGVRVNCLWCRSDGKSVLA-ADTHHRIRTYNFEHLTDSNLLQEDH--- 473
I + E V ++ KS+L R+ ++ L +++
Sbjct: 160 ---INLKNFGKNEYA-VRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215
Query: 474 PVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSC----FGGAN 528
V S ID + L+ +T+G + +WD+R +L+R + I F G N
Sbjct: 216 AVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA--PITHVEVCQFYGKN 272
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV------------------ 570
V GS + IW+ + S + P+
Sbjct: 273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL 332
Query: 571 ------YHQMIASVSDDCTVRIW 587
+++ + ++ ++
Sbjct: 333 STISVSNDKILLTDEATSSIVMF 355
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 6e-23
Identities = 36/363 (9%), Positives = 88/363 (24%), Gaps = 109/363 (30%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR------------KTLEGH 346
D V P+ A SKD +I+ V+ + + K +
Sbjct: 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKN 168
Query: 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGT 405
V A+ + LLV + +++I T E L++ N +++S + +
Sbjct: 169 EYAVRMRAFVNEEKSLLVALTNLS-RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC 227
Query: 406 KFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD 465
+ G RG + +W + + +
Sbjct: 228 VLILGTTRG-------------------IIDIWDIRFNVLIRSWSFGDHAPITH------ 262
Query: 466 SNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQG----VTQGQFTI 520
V + + ++ S++ + +W+ F + F
Sbjct: 263 ---------VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLP 313
Query: 521 H------------------SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV 562
S +N + + + ++ + + +R
Sbjct: 314 IEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFS 373
Query: 563 SCVAWN-----------------------PVYHQ---------------MIASVSDDCTV 584
+YH ++ + + +
Sbjct: 374 DVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLI 433
Query: 585 RIW 587
I+
Sbjct: 434 GIF 436
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 1e-09
Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 509 KFQGVTQGQFTIHS-------CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS----- 556
+G + ++ +GS+ G + IW++K + S
Sbjct: 49 NLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY 108
Query: 557 GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSP 597
+ TV+ + P + A S D + + + +S
Sbjct: 109 DCSSTVTQITMIPNFDA-FAVSSKDGQIIVLKVNHYQQESE 148
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 543 IWHVKRELPIATLSGHT-RTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ +++ +L IATL + +++ A +P + + SD ++IW
Sbjct: 47 MGNLRGKL-IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIW 91
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-24
Identities = 41/289 (14%), Positives = 80/289 (27%), Gaps = 65/289 (22%)
Query: 309 FSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH--LLVV 365
F G + + + D + D+ + + L++SP + L+
Sbjct: 10 FGTSGTSMFGSATTDNHNPMKDI----------EVTSSPDDSIGCLSFSPPTLPGNFLIA 59
Query: 366 GPEDCHELWVWNIET---ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE 422
G + W ++ + + + H + W+ DG+K CD
Sbjct: 60 GSWAND-VRCWEVQDSGQTIPKAQQMH--TGPVLDVCWSDDGSKVFTAS-------CD-- 107
Query: 423 GQVLDSWEGVRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLTDSNLLQEDHPVMSFTID 481
+W S +++ A H ++T ++ + + + M+ + D
Sbjct: 108 KTA----------KMWDLSSNQAIQIA-QHDAPVKTIHWIKAPNYSCV------MTGSWD 150
Query: 482 ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541
T + WD R + Q + VA+ V
Sbjct: 151 KT------------LKFWDTRSSNPMMVLQL--PERCYCADVIY--PMAVVATAERGLIV 194
Query: 542 YIWHVKRELPIATLSGHTRTVSCVAWNP---VYHQMIASVSDDCTVRIW 587
Y + S CVA A S + V I
Sbjct: 195 YQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 53/318 (16%), Positives = 97/318 (30%), Gaps = 75/318 (23%)
Query: 295 QVLNDHCDEVWFCKFSPD---GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+V + D + FSP G L GS V W+V K + HT V
Sbjct: 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQ--DSGQTIPKAQQMHTGPVL 90
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVC 409
+ WS D S + D +W++ + H + + W + + + +
Sbjct: 91 DVCWSDDGSK-VFTASCDKT-AKMWDLSSNQAIQIAQHD--APVKTIHWIKAPNYSCVMT 146
Query: 410 GGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL 468
G SW+ ++ W ++ R
Sbjct: 147 G-----------------SWDKTLK---FWDTRSSNPMMVLQLPERC------------- 173
Query: 469 LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR--DRILLRKFQGVTQGQFTIHSCF-- 524
+ D +A++ + +G+ ++ L R + + + F
Sbjct: 174 ---------YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCV-AIFKD 223
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELP---IATLSGHTRT------------VSCVAWNP 569
A GS +G+V I ++ P T H V+ +A++P
Sbjct: 224 KQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP 283
Query: 570 VYHQMIASVSDDCTVRIW 587
V H +A+V D W
Sbjct: 284 V-HGTLATVGSDGRFSFW 300
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 1e-19
Identities = 38/299 (12%), Positives = 71/299 (23%), Gaps = 79/299 (26%)
Query: 293 TTQVLNDHCDEVWFCKF--SPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ H V + +P+ + TGS D T+ WD + L+
Sbjct: 119 QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR----SSNPMMVLQLPERCY 174
Query: 351 AYLAWSPDSSHLLVVGPEDCHE-LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409
P VV + ++ + R + + + +D
Sbjct: 175 CADVIYPM----AVVATAERGLIVYQLENQPSEFRRIESP-LKHQHRCVAIFKDK----- 224
Query: 410 GGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL 468
Q G L S EG V + + HR + T+++
Sbjct: 225 --------QNKPTGFALGSIEGRVAI-HYINPPNPAKDNFTFKCHR------SNGTNTSA 269
Query: 469 LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528
Q+ + V + L
Sbjct: 270 PQDIYAVNG-----------IAFHPVHGTL------------------------------ 288
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
A+ DG+ W + T + +S +N + A S +
Sbjct: 289 ----ATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHN-GNIFAYASSYDWSKGH 342
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 7e-13
Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 18/104 (17%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T V F P LAT D WD D KT E ++
Sbjct: 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD----ARTKLKTSEQLDQPIS 319
Query: 352 YLAWSPDSSHLLVVG-------------PEDCHELWVWNIETEL 382
++ + + P+ + +++ N EL
Sbjct: 320 ACCFNHNGNI-FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEEL 362
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 5e-10
Identities = 43/262 (16%), Positives = 73/262 (27%), Gaps = 82/262 (31%)
Query: 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW- 400
+L G T + + + D H + +IE SP+DS+ S+
Sbjct: 2 SLFGTTS-----GFGTSGTSMFGSATTDNH-NPMKDIEV-------TSSPDDSIGCLSFS 48
Query: 401 --NRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRT 457
G + G SW VR W + D+ I
Sbjct: 49 PPTLPGNFLIAG-----------------SWANDVR---CW---E-----VQDSGQTIPK 80
Query: 458 YNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQG 512
H PV+ ++ D + ++ + + +WDL +
Sbjct: 81 AQQMH---------TGPVLDVCWSDDGS-KVF----TASCDKTAKMWDLSSNQAI----- 121
Query: 513 VTQGQFTIHS------CFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCV 565
Q H + A N V +GS D + W + P+ L R
Sbjct: 122 ----QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCAD 177
Query: 566 AWNPVYHQMIASVSDDCTVRIW 587
P ++A+ V
Sbjct: 178 VIYP--MAVVATAERGLIVYQL 197
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 102 bits (258), Expect = 3e-24
Identities = 46/330 (13%), Positives = 96/330 (29%), Gaps = 70/330 (21%)
Query: 292 ETTQVLN--DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD-PVTFTCQHRKTLEGHTL 348
+ +N +H + V S + TG K V +WD+ P + +
Sbjct: 40 RHARQINTLNHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPGNKSPVSQLDCLNRDN 98
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIE--TELLRVKLN-HSPEDSLTSCSWNRDGT 405
+ PD L+VG E L +W++ T ++ +L + + + + + D
Sbjct: 99 YIRSCKLLPDGCT-LIVGGEAST-LSIWDLAAPTPRIKAELTSSA--PACYALAISPDSK 154
Query: 406 KFVCGG----IRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTY 458
I D+ ++ ++G +C+ +DG + + +R++
Sbjct: 155 VCFSCCSDGNIA----VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSW 210
Query: 459 NFEHLTDSNLLQEDH--PVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDRILLRK 509
+ L Q D + S + LA V + + +
Sbjct: 211 DLR--EGRQLQQHDFTSQIFSLGYCPTGE-WLA----VGMESSN--VEVLHVNKP-DKYQ 260
Query: 510 FQGVTQGQFTIHSCFGGANQDFV------------ASGSEDGKVYIWHVKRELPIATLSG 557
H V S +D + W I
Sbjct: 261 LHL--------HE-------SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-K 304
Query: 558 HTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ +V + + I + S D ++
Sbjct: 305 ESSSVLSCDISV-DDKYIVTGSGDKKATVY 333
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 4e-18
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE 344
+ + + + CK PDG L G + +T+ IWD+ T + L
Sbjct: 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA--ELT 138
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRD 403
LA SPDS D + + VW++ + L + H+ D + + D
Sbjct: 139 SSAPACYALAISPDSKV-CFSCCSDGN-IAVWDLHNQTLVRQFQGHT--DGASCIDISND 194
Query: 404 GTKFVCGG 411
GTK GG
Sbjct: 195 GTKLWTGG 202
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 7e-16
Identities = 36/259 (13%), Positives = 68/259 (26%), Gaps = 65/259 (25%)
Query: 343 LEGHTLG--VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW 400
+G + D V P D + LNH + + + +
Sbjct: 3 FQGAMGSKPAYSFHVTADGQMQPVPFPPD-ALIGPGIPRHARQINTLNHG--EVVCAVTI 59
Query: 401 NRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNF 460
+ G V+ +W S +
Sbjct: 60 SNPTRHVYTG-----------------GKGCVK---VWDISHPGNK-------------- 85
Query: 461 EHLTDSNLLQEDHPVMS--FTIDATDRLALLNVS-----TQGVHLWDLRDR--ILLRKFQ 511
++ + L D+ + S D L T + +WDL + +
Sbjct: 86 SPVSQLDCLNRDNYIRSCKLLPDGC-TLI----VGGEAST--LSIWDLAAPTPRIKAELT 138
Query: 512 GVTQGQFTIHS-CFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568
++ + D S DG + +W + + + GHT SC+ +
Sbjct: 139 SSAPA---CYALAI---SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192
Query: 569 PVYHQMIASVSDDCTVRIW 587
+ + D TVR W
Sbjct: 193 N-DGTKLWTGGLDNTVRSW 210
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 61.7 bits (151), Expect = 2e-10
Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 13/117 (11%)
Query: 300 HCDEVWFCKFSPDGLKLAT-GSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD 358
+ + DG D + + TL H V + S
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR----HARQINTL-NHGEVVCAVTISNP 62
Query: 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSP----EDSLTSCSWNRDGTKFVCGG 411
+ H + G + C + VW+I + ++ ++ + SC DG + GG
Sbjct: 63 TRH-VYTGGKGC--VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG 116
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 2e-06
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDV 330
V C S D + TGS D +++V
Sbjct: 305 ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 4e-24
Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 57/305 (18%)
Query: 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH 361
D + K P L S D ++ ++ D ++L + + + ++
Sbjct: 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDL 70
Query: 362 LLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCD 420
+ VG E+ ++ L ++ E +L C + K +
Sbjct: 71 QIYVGTVQ-GEILKVDLIGSPSFQALTNN-EANLGICRICKYGDDKLIAA---------- 118
Query: 421 IEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFT 479
SW+G + + + + A + FT
Sbjct: 119 -------SWDGLIE---VIDPRNYGDGVIAVKNLNSNNTK-------------VKNKIFT 155
Query: 480 IDATDRLALLNVSTQGVHLWDLR--DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537
+D ++ ++ V + L + + + Q + + + A S
Sbjct: 156 MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY-ACSSI 214
Query: 538 DGKVYIWHVKRELPIA------TLSGHTRT---------VSCVAWNPVYHQMIASVSDDC 582
DG+V + + H V+ + ++P H+ + + D
Sbjct: 215 DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDG 273
Query: 583 TVRIW 587
+ W
Sbjct: 274 IISCW 278
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 2e-15
Identities = 32/312 (10%), Positives = 84/312 (26%), Gaps = 57/312 (18%)
Query: 299 DHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP 357
+ + C F + L++ G+ ++ D+ + L + +
Sbjct: 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI----GSPSFQALTNNEANLGICRICK 109
Query: 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSC-----SWNRDGTKFVCGGI 412
L+ D + V + V + + T + + + ++ + G
Sbjct: 110 YGDDKLIAASWDGL-IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMN 168
Query: 413 RGQFYQCDIE------GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS 466
Q + G + +S ++ + + A
Sbjct: 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYA------------------ 210
Query: 467 NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CF- 524
+ID + + + R T + ++S F
Sbjct: 211 ----------CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS 260
Query: 525 --GGANQDFVASGSEDGKVYIWHVKRELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDD 581
F+ + DG + W+++ I + + +V +A + ++ + D
Sbjct: 261 PRHK----FLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSD---NILCLATSD 313
Query: 582 CTVRIWGPHLNT 593
T + T
Sbjct: 314 DTFKTNAAIDQT 325
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 5e-12
Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)
Query: 292 ETTQVLNDHCDEVWFCKF-SPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ Q L ++ + C+ KL S D + + D K L + V
Sbjct: 90 PSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149
Query: 351 AYLAWSPDSS-HLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSC--SWNRDGTK 406
++ D++ L+VG + + + + E + S ++
Sbjct: 150 KNKIFTMDTNSSRLIVGMNNSQ-VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG 208
Query: 407 FVCGGIRG 414
+ C I G
Sbjct: 209 YACSSIDG 216
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 5e-09
Identities = 20/212 (9%), Positives = 60/212 (28%), Gaps = 49/212 (23%)
Query: 385 VKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDG 443
V++ +P+D ++ + + SW+G + ++
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLIT-----------------SWDGSLT---VYKFDIQ 43
Query: 444 KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVSTQG-VHLWD 500
+ + HP++ F + ++ + + QG + D
Sbjct: 44 AKNVDLLQS-------LRY---------KHPLLCCNFIDNTDLQIYV--GTVQGEILKVD 85
Query: 501 LRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR 560
L + C G ++ + + S DG + + + +
Sbjct: 86 LIGSPSFQALTNNEANLGICRICKYGDDK--LIAASWDGLIEVIDPRNYGDGVIAVKNLN 143
Query: 561 TVSCVAWNPVY-----HQMIASVSDDCTVRIW 587
+ + N ++ + ++ V+ +
Sbjct: 144 SNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWF 175
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 9e-07
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
+ V +FSP L T D + W++ K + V
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK---FNEDSVVK 299
Query: 353 LAWSPD 358
+A S +
Sbjct: 300 IACSDN 305
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 25/126 (19%), Positives = 38/126 (30%), Gaps = 17/126 (13%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP----------VTFTCQHRKTLEGH 346
L +V +G A S D V + D F C HR L+
Sbjct: 192 LKYQIRDVALLPKEQEG--YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC-HRLNLKDT 248
Query: 347 TLG--VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG 404
L V + +SP L D + WN++T EDS+ + + +
Sbjct: 249 NLAYPVNSIEFSPRHKF-LYTAGSDGI-ISCWNLQTRKKIKNFAKFNEDSVVKIACSDNI 306
Query: 405 TKFVCG 410
Sbjct: 307 LCLATS 312
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 9e-24
Identities = 56/303 (18%), Positives = 109/303 (35%), Gaps = 72/303 (23%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ ++ V+ C D K+ +G +D T+ IWD + T + ++ L GHT V
Sbjct: 124 QRIHCRSETSKGVY-C-LQYDDQKIVSGLRDNTIKIWDKN----TLECKRILTGHTGSV- 176
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
L D + + G D + VW++ T E+L ++H +++ + + V
Sbjct: 177 -LCLQYDERVI-ITGSSDS-TVRVWDVNTGEMLNTLIHHC--EAVLHLRF--NNGMMVTC 229
Query: 411 GIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADT---H-HRIRTYNFEHLTD 465
S + + V W + + H + +F D
Sbjct: 230 -----------------SKDRSIAV---WDMASPTDITLRRVLVGHRAAVNVVDF----D 265
Query: 466 SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS-CF 524
+ +S + D T + +W+ +R G +G I +
Sbjct: 266 DKYI------VSASGDRT------------IKVWNTSTCEFVRTLNGHKRG---IACLQY 304
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584
V SGS D + +W ++ + L GH V C+ ++ + I S + D +
Sbjct: 305 RD---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN---KRIVSGAYDGKI 358
Query: 585 RIW 587
++W
Sbjct: 359 KVW 361
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 9e-14
Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 12/110 (10%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQDFVASGSEDGKVYIWHVKRELPIAT 554
+ +WD R G T + + + +GS D V +W V + T
Sbjct: 155 IKIWDKNTLECKRILTGHTGS---VLCLQYDE---RVIITGSSDSTVRVWDVNTGEMLNT 208
Query: 555 LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLASSLT 604
L H V + +N M+ + S D ++ +W + + L L
Sbjct: 209 LIHHCEAVLHLRFNN---GMMVTCSKDRSIAVW--DMASPTDITLRRVLV 253
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 29/107 (27%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVK-- 547
+ LWD+ LR +G H F + SG+ DGK+ +W +
Sbjct: 318 IRLWDIECGACLRVLEG--------HEELVRCIRFDN---KRIVSGAYDGKIKVWDLVAA 366
Query: 548 -------RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
L + TL H+ V + ++ I S S D T+ IW
Sbjct: 367 LDPRAPAGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIW 410
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV-------DPVTFTCQHRKTLEGHT 347
+VL H + V +F D ++ +G+ D + +WD+ P C TL H+
Sbjct: 330 RVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR--TLVEHS 385
Query: 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTS 397
V L + +V D + +W+ + + SP + T
Sbjct: 386 GRVFRLQF---DEFQIVSSSHD-DTILIWDFLNDPAAQAEPPRSPSRTYTY 432
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 24/131 (18%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
CE + LN H + + +GS D T+ +WD++ + LEGH V
Sbjct: 286 CEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIE----CGACLRVLEGHEELV 339
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET----------ELLRVKLNHSPEDSLTSCSW 400
+ + +V G D ++ VW++ LR + HS + +
Sbjct: 340 RCIRFDNK---RIVSGAYD-GKIKVWDLVAALDPRAPAGTLCLRTLVEHS--GRVFRLQF 393
Query: 401 NRDGTKFVCGG 411
D + V
Sbjct: 394 --DEFQIVSSS 402
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
+ L +H V+ +F D ++ + S D T++IWD + + Y
Sbjct: 379 RTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL----NDPAAQAEPPRSPSRTYTY 432
Query: 355 WS 356
S
Sbjct: 433 IS 434
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 10/80 (12%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQ-FTIHS------CFGGANQDFVASGSEDGKVYIWHVKR 548
+ +WDL + R G + HS F + S S D + IW
Sbjct: 358 IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWDFLN 414
Query: 549 ELPIATLSGHTRTVSCVAWN 568
+ + + + +
Sbjct: 415 DPAAQAEPPRSPSRTYTYIS 434
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 2e-22
Identities = 45/292 (15%), Positives = 81/292 (27%), Gaps = 42/292 (14%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ T VL F ++SP+ K A GS + + + + +
Sbjct: 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT--------------- 396
L W P++ LL G D +V + + K S S
Sbjct: 151 SLDWHPNNV-LLAAGCADRK-AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWV 208
Query: 397 -SCSWNRDGTKFVCGG----IRGQFYQCDIEGQVLDSWEGVRVNCLWCRS-----DGKSV 446
+ ++ G G + Q + V+++ L RS + +
Sbjct: 209 HAVGFSPSGNALAYAGHDSSVT--IAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-I 265
Query: 447 LAA--DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504
+AA + + N + L SFT R
Sbjct: 266 VAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFR 325
Query: 505 ILLRKFQGVTQGQ-FTIH-------SCFGGANQDF--VASGSEDGKVYIWHV 546
+ K + T+H + G + S DG+V +W +
Sbjct: 326 NMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 4e-20
Identities = 42/341 (12%), Positives = 91/341 (26%), Gaps = 56/341 (16%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ + +DH V ++P ++ T S+D +++ P T + L
Sbjct: 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP-DGTWKQTLVLLRLNRAAT 104
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETE----LLRVKLNHSPEDSLTSCSWNRDGTKF 407
++ WSP+ VG + V E E + + ++ S W+ +
Sbjct: 105 FVRWSPN-EDKFAVGSGA-RVISVCYFEQENDWWVSKHLKRPL-RSTILSLDWHPNNVLL 161
Query: 408 VCGG-----------IRGQFYQCDIEGQVLDSWEGVRV----NCLWCRS-----DGKSVL 447
G +R + + + W + G ++
Sbjct: 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALA 221
Query: 448 AADTHHRIRTYNFEHLTDS-----NLLQEDHPVMS--FTIDAT-------DRLALLNVST 493
A + + P+ S + ++ LL +
Sbjct: 222 YAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNE 281
Query: 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD--FVASGSEDGKVYIW--HVKRE 549
G D G ++ FT G ++ V+ + +
Sbjct: 282 SGWAHTRDLD-------AGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQ 334
Query: 550 LPIATLSGHTRTVSCVAW---NPVYHQMIASVSDDCTVRIW 587
+ + H ++ + P S D V +W
Sbjct: 335 SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLW 375
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 88.3 bits (219), Expect = 5e-19
Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 10/122 (8%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
T+QVL+ + F+ + T + V +++ D + T H V
Sbjct: 3 TSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR--TFSDHDKIVTC 60
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSPEDSLTSCSWNRDGTKFV 408
+ W+P S+ +V +D +V+ + V L + + T W+ + KF
Sbjct: 61 VDWAPKSN-RIVTCSQD-RNAYVYEKRPDGTWKQTLVLLRLN--RAATFVRWSPNEDKFA 116
Query: 409 CG 410
G
Sbjct: 117 VG 118
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 80.6 bits (199), Expect = 2e-16
Identities = 25/148 (16%), Positives = 45/148 (30%), Gaps = 8/148 (5%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL 343
P T V FSP G LA D++V I + T+
Sbjct: 188 VWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV 247
Query: 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD 403
+ L + L W+ +S+ +V + + + E+ + + +
Sbjct: 248 KLSQLPLRSLLWANESA--IVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNT 305
Query: 404 GTKFVCGG------IRGQFYQCDIEGQV 425
G G +R F D++G
Sbjct: 306 GEGREEEGPVSFTALRSTFRNMDLKGSS 333
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 9e-12
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 531 FVASGSEDGKVYIWHVK--RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + +V ++ T S H + V+CV W P I + S D ++
Sbjct: 25 EFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVY 82
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 8/63 (12%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 530 DFVASGSEDGKVYIWHVKRE----LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
+ +A D V I + + T+ + + W ++A+ + +
Sbjct: 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANE-SAIVAAGYNYSPIL 276
Query: 586 IWG 588
+ G
Sbjct: 277 LQG 279
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 4/34 (11%), Positives = 10/34 (29%), Gaps = 1/34 (2%)
Query: 554 TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
L + A+N + + V ++
Sbjct: 6 VLHILPKPSYEHAFNS-QRTEFVTTTATNQVELY 38
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 4e-22
Identities = 53/301 (17%), Positives = 99/301 (32%), Gaps = 91/301 (30%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
TT+ H +V FS D ++ +GS+D T+ +W+ C++ E H+ V+
Sbjct: 119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG---VCKYTVQDESHSEWVS 175
Query: 352 YLAWSPDSSHLLVV-GPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVC 409
+ +SP+SS+ ++V D + VWN+ L+ H+ L + + + DG+
Sbjct: 176 CVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCAS 232
Query: 410 GGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL 468
G +G LW ++GK + D I F +
Sbjct: 233 G-----------------GKDGQAM---LWDLNEGKHLYTLDGGDIINALCFSP--NRYW 270
Query: 469 LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528
L AT + +WDL +I++ + +
Sbjct: 271 L----------CAATGP---------SIKIWDLEGKIIVDELKQEVIST----------- 300
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH--QMIASVSDDCTVRI 586
+ + +AW+ Q + + D VR+
Sbjct: 301 -------------------------SSKAEPPQCTSLAWSA---DGQTLFAGYTDNLVRV 332
Query: 587 W 587
W
Sbjct: 333 W 333
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 80.2 bits (199), Expect = 1e-16
Identities = 54/317 (17%), Positives = 90/317 (28%), Gaps = 100/317 (31%)
Query: 283 LCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT 342
L E + L H V S DG +GS D T+ +WD+ T +
Sbjct: 68 LTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT----TGTTTRR 123
Query: 343 LEGHTLGVAYLAWSPDSSHL------------------LVVGPEDCHELWV--------- 375
GHT V +A+S D+ + ++ H WV
Sbjct: 124 FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 183
Query: 376 ----------------WNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ 418
WN+ L+ H+ L + + + DG+ G
Sbjct: 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASG-------- 233
Query: 419 CDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMS 477
+G LW ++GK + D I F + L
Sbjct: 234 ---------GKDGQAM---LWDLNEGKHLYTLDGGDIINALCFSP--NRYWL-------- 271
Query: 478 FTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ-FTIHS------CFGGANQD 530
AT + +WDL +I++ + + + A+
Sbjct: 272 --CAATGP---------SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW-SADGQ 319
Query: 531 FVASGSEDGKVYIWHVK 547
+ +G D V +W V
Sbjct: 320 TLFAGYTDNLVRVWQVT 336
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 4e-14
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 295 QVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVD-PVTFTCQHRKTLEGHTLGVAY 352
L H V +P + + S+D T+I+W + T ++ L GH+ V+
Sbjct: 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 91
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
+ S D + G D L +W++ T R + H+ + S +++ D + V G
Sbjct: 92 VVISSDGQF-ALSGSWD-GTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDNRQIVSG 146
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 1e-12
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQDFVASGSEDGKVYIWHVK-RELPIA 553
+ LWDL R+F G T+ + S F ++ + SGS D + +W+
Sbjct: 110 LRLWDLTTGTTTRRFVGHTKD---VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTV 165
Query: 554 TLSGHTRTVSCVAWNPV-YHQMIASVSDDCTVRIW 587
H+ VSCV ++P + +I S D V++W
Sbjct: 166 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 200
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 2e-12
Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 5/105 (4%)
Query: 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370
++G T ++ +T R TL+GH V +A +P +++ D
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRD- 60
Query: 371 HELWVWNIETELLRVKLNHSP----EDSLTSCSWNRDGTKFVCGG 411
+ +W + + + ++ + DG + G
Sbjct: 61 KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 65.6 bits (161), Expect = 9e-12
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
F SGS DG + +W + GHT+ V VA++ ++ I S S D T+++W
Sbjct: 100 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLW 155
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 64.8 bits (159), Expect = 2e-11
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 16/103 (15%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS------CFGGANQDFVASGSEDGKVYIWHVKRE 549
+L+ + Q +G H+ D + S S D + +W + R+
Sbjct: 16 ENLYFQ----SMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRD 71
Query: 550 -----LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+P L GH+ VS V + Q S S D T+R+W
Sbjct: 72 ETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLW 113
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 4e-11
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 532 VASGSEDGKVYIWHVKRELP----IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+SG + G ++ TL GH V+ +A P + MI S S D T+ +W
Sbjct: 7 HSSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 66
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 5e-11
Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH--QMIASVSDDCTVRI 586
+ S D V +W++ GHT ++ V +P + AS D +
Sbjct: 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP---DGSLCASGGKDGQAML 241
Query: 587 WGPHLNTNK 595
W LN K
Sbjct: 242 W--DLNEGK 248
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 2e-21
Identities = 57/325 (17%), Positives = 102/325 (31%), Gaps = 88/325 (27%)
Query: 294 TQVLNDHCDEVW------FCKFSPDGLKLATGSKDTTVIIWDVD---PVTFTCQHRKTLE 344
+L H D V K + D L +GS+D TV+IW + + K L
Sbjct: 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT 73
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRD 403
GH V+ LA S ++ + D L +W++ T + + H + S +++ D
Sbjct: 74 GHNHFVSDLALSQENCF-AISSSWD-KTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPD 129
Query: 404 GTKFVCGG----IR-----GQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHR 454
+ + G I+ G +C ++ V+C+ KS
Sbjct: 130 NRQILSAGAEREIKLWNILG---ECKFSSAEKENHSD-WVSCVRYSPIMKSANKVQPFAP 185
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514
S D + +W+ + + F+
Sbjct: 186 Y-------------------FASVGWDGR------------LKVWNTNFQ-IRYTFKA-- 211
Query: 515 QGQFTIHSCFGGANQDFVASG--SEDGK----------VYIWHVKRELPIATLSGHTRTV 562
H V S +GK + IW + T+
Sbjct: 212 ------HE-------SNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTI 258
Query: 563 SCVAWNPVYHQMIASVSDDCTVRIW 587
+ +A+NP Q +A +D V+I+
Sbjct: 259 NQIAFNPK-LQWVAVGTDQ-GVKIF 281
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 1e-15
Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 19/132 (14%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ H V SP+G +ATG KD ++IWD+ + + +
Sbjct: 203 FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL----NLTYPQREFDAGSTI 258
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP------------EDSLTSC 398
+A++P + VG + + ++N+ T+ TS
Sbjct: 259 NQIAFNPKLQW-VAVGTDQG--VKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSL 315
Query: 399 SWNRDGTKFVCG 410
+WN G K G
Sbjct: 316 AWNALGKKLFAG 327
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 1e-15
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 12/128 (9%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
T + H EV+ FSPD ++ + + + +W++ E H+ V+
Sbjct: 109 TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL--GECKFSSAEKENHSDWVS 166
Query: 352 YLAWSPDSSHLLVVGPEDCH--------ELWVWNIETELLRVKLNHSPEDSLTSCSWNRD 403
+ +SP V P + L VWN ++ H ++ S + +
Sbjct: 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHE--SNVNHLSISPN 224
Query: 404 GTKFVCGG 411
G GG
Sbjct: 225 GKYIATGG 232
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 1e-14
Identities = 46/300 (15%), Positives = 96/300 (32%), Gaps = 93/300 (31%)
Query: 320 SKDTTVIIWDVDPVTFTCQHRKTLEGHT---LGVAY---LAWSPDSSHLLVVGPEDCHEL 373
+ ++++ I V R LEGH+ + + DS L + G D +
Sbjct: 2 ADNSSLDIQVV--------KRGILEGHSDWVTSIVAGFSQKENEDSPVL-ISGSRD-KTV 51
Query: 374 WVWNIETELLRVKLN--------HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV 425
+W + E H+ ++ + +++ +
Sbjct: 52 MIWKLYEEEQNGYFGIPHKALTGHN--HFVSDLALSQENCFAISS--------------- 94
Query: 426 LDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFE-HLTDSNLLQEDHPVMS--FTID 481
SW+ +R LW D T + F H V S F+ D
Sbjct: 95 --SWDKTLR---LW---D------LRTGTTYKR--FVGH---------QSEVYSVAFSPD 129
Query: 482 ATDRLALLNVS-----TQGVHLWDL--RDRILLRKFQG----VTQGQF---TIHSCFGGA 527
++ S + LW++ + + + V+ ++ +
Sbjct: 130 NR-QIL----SAGAERE--IKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQP 182
Query: 528 NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ AS DG++ +W+ ++ T H V+ ++ +P + IA+ D + IW
Sbjct: 183 FAPYFASVGWDGRLKVWNTNFQI-RYTFKAHESNVNHLSISPN-GKYIATGGKDKKLLIW 240
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 20/106 (18%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQDFVASGSEDGKVYIWHVK------- 547
+ +WD+ + ++ TI+ F +VA G+ D V I+++
Sbjct: 237 LLIWDILNLTYPQREFDAGS---TINQIAFN-PKLQWVAVGT-DQGVKIFNLMTQSKAPV 291
Query: 548 ------RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
G + +AWN + + + + D +R +
Sbjct: 292 CTIEAEPITKAEGQKGKNPQCTSLAWNAL-GKKLFAGFTDGVIRTF 336
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 282 HLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
+CT E P + + ++ G KL G D + + +
Sbjct: 290 PVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 6e-21
Identities = 50/303 (16%), Positives = 101/303 (33%), Gaps = 83/303 (27%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQH--RKTLEGHTLG 349
+T+ H +V FS D ++ + S+D T+ +W+ C++ + EGH
Sbjct: 463 VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN---TLGECKYTISEGGEGHRDW 519
Query: 350 VAYLAWSPDSSHLLVV-GPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKF 407
V+ + +SP++ +V D + VWN+ LR L H+ +++ + + DG+
Sbjct: 520 VSCVRFSPNTLQPTIVSASWDKT-VKVWNLSNCKLRSTLAGHT--GYVSTVAVSPDGSLC 576
Query: 408 VCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS 466
G +G V LW ++GK + + + + I F +
Sbjct: 577 ASG-----------------GKDGVVL---LWDLAEGKKLYSLEANSVIHALCFSP--NR 614
Query: 467 NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGG 526
L AT+ G+ +WDL + ++ + + +
Sbjct: 615 YWL----------CAATE---------HGIKIWDLESKSIVEDLKVDLKAE--------- 646
Query: 527 ANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH--QMIASVSDDCTV 584
A + + W+ + S D +
Sbjct: 647 -----------------AEKADNSGPAATKRKVIYCTSLNWSA---DGSTLFSGYTDGVI 686
Query: 585 RIW 587
R+W
Sbjct: 687 RVW 689
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-16
Identities = 50/311 (16%), Positives = 88/311 (28%), Gaps = 66/311 (21%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ + + +LA + + + + + +
Sbjct: 287 DEGLEAVNKDKPLGAVALKSYEEELAKDPRIAA-TMENAQ----KGEIMPNIPQMSAFWY 341
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+ + ++ + N L+ + D +T+ + D +
Sbjct: 342 AVRTAVINAASGRQTVDAALAAAQTNAAAGLVLKGTMRAHTDMVTAIATPIDNADIIVSA 401
Query: 412 -----IR--GQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEH 462
I G G V + SDG+ L+
Sbjct: 402 SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSG------------- 448
Query: 463 LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522
S D RL WDL + R+F G T+ + S
Sbjct: 449 ---SW-------------DGELRL------------WDLAAGVSTRRFVGHTKD---VLS 477
Query: 523 -CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS----GHTRTVSCVAWNPV-YHQMIA 576
F N+ + S S D + +W+ E T+S GH VSCV ++P I
Sbjct: 478 VAFSLDNR-QIVSASRDRTIKLWNTLGEC-KYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535
Query: 577 SVSDDCTVRIW 587
S S D TV++W
Sbjct: 536 SASWDKTVKVW 546
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-15
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 282 HLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLK-LATGSKDTTVIIWDVDPV-TFTCQH 339
T + H D V D + + S+D ++I+W +
Sbjct: 363 AAQTNAAAGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVA 422
Query: 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSC 398
++ L GH+ V + S D + G D EL +W++ R + H+ + S
Sbjct: 423 QRRLTGHSHFVEDVVLSSDGQF-ALSGSWD-GELRLWDLAAGVSTRRFVGHT--KDVLSV 478
Query: 399 SWNRDGTKFVCG 410
+++ D + V
Sbjct: 479 AFSLDNRQIVSA 490
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 7e-15
Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 26/138 (18%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
C+ L H V SPDG A+G KD V++WD+ + +LE ++ +
Sbjct: 551 CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA----EGKKLYSLEANS-VI 605
Query: 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSP-----------------E 392
L +SP+ + L E + +W++E+ ++
Sbjct: 606 HALCFSPN-RYWLCAATEHG--IKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKV 662
Query: 393 DSLTSCSWNRDGTKFVCG 410
TS +W+ DG+ G
Sbjct: 663 IYCTSLNWSADGSTLFSG 680
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 3e-14
Identities = 39/293 (13%), Positives = 82/293 (27%), Gaps = 74/293 (25%)
Query: 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372
+ S + + ++ T + + + + +A L P
Sbjct: 263 SAGINAASPNKELAKEFLENYLLTDEGLEAV-NKDKPLGAVALKSYEEEL-AKDPRI--A 318
Query: 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV 432
+ N + + + ++
Sbjct: 319 ATMENAQKG------------------------------------EIMPNIPQMSAFWYA 342
Query: 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLN 490
+ + G+ + A + + V + ID D +
Sbjct: 343 VRTAVINAASGRQTVDAALAAAQTNAAAGLVLKGTMRAHTDMVTAIATPIDNADIIV--- 399
Query: 491 VS-----TQGVHLWDLRDR-----ILLRKFQGVTQGQFTIHS------CFGGANQDFVAS 534
S + + LW L + R+ G HS ++ F S
Sbjct: 400 -SASRDKS--IILWKLTKDDKAYGVAQRRLTG--------HSHFVEDVVLS-SDGQFALS 447
Query: 535 GSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
GS DG++ +W + + GHT+ V VA++ ++ I S S D T+++W
Sbjct: 448 GSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLW 499
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 8e-06
Identities = 11/53 (20%), Positives = 17/53 (32%)
Query: 278 LLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV 330
L VD E+ +S DG L +G D + +W +
Sbjct: 639 LKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 2e-20
Identities = 36/296 (12%), Positives = 86/296 (29%), Gaps = 43/296 (14%)
Query: 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL 363
+ + + + D + + H V + P ++ ++
Sbjct: 85 IASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVI 144
Query: 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLT---------SCSWNRDGTKFVCGGIRG 414
++ V++ + + + + L SWN + ++
Sbjct: 145 ATKTPSS-DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA--- 200
Query: 415 QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHP 474
+ + CLW D + + H
Sbjct: 201 -----SDDHTI----------CLW---DINATPKEHRVIDAKNIFTGH---------TAV 233
Query: 475 VMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQGQFTIHSC-FGGANQDFV 532
V +V+ + +WD R+ + V ++ F ++ +
Sbjct: 234 VEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293
Query: 533 ASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
A+GS D V +W ++ +L + + H + V W+P ++AS D + +W
Sbjct: 294 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 2e-14
Identities = 50/299 (16%), Positives = 91/299 (30%), Gaps = 70/299 (23%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLK-LATGSKDTTVIIWDVD---PVTFTCQHRKTLEGH 346
C+ L H E + ++P+ L + S D T+ +WD++ + GH
Sbjct: 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH 230
Query: 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSPEDSLTSCSWNR 402
T V +AW L +D L +W+ + H+ + S+N
Sbjct: 231 TAVVEDVAWHLLHESLFGSVADDQK-LMIWDTRNNNTSKPSHTVDAHT--AEVNCLSFNP 287
Query: 403 DGTKFVCGGIRGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFE 461
+ G S + V LW + K L + H+
Sbjct: 288 YSEFILATG----------------SADKTVA---LWDLRNLKLKLHSFESHK------- 321
Query: 462 HLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLR----DRILLRKFQGVTQG 516
+ + L + T +H+WDL ++ G +
Sbjct: 322 -----------DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370
Query: 517 QFTI--HS------CFGGANQDFVASGSEDGKVYIWHVKR--------ELPIATLSGHT 559
F H+ + + S SED + +W + E+P + L +T
Sbjct: 371 LFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETNT 429
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 5e-12
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTL 343
KE + + H V + L + + D ++IWD T + T+
Sbjct: 215 PKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-TSKPSHTV 273
Query: 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPEDSLTSCSWN 401
+ HT V L+++P S +L G D + +W++ L +H D + W+
Sbjct: 274 DAHTAEVNCLSFNPYSEFILATGSAD-KTVALWDLRNLKLKLHSFESHK--DEIFQVQWS 330
Query: 402 RDG 404
Sbjct: 331 PHN 333
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 90.9 bits (225), Expect = 6e-20
Identities = 34/326 (10%), Positives = 97/326 (29%), Gaps = 52/326 (15%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS 356
N + V +F+ D L + + I++V PV + ++ +
Sbjct: 15 ENHVSNPVTDYEFNQDQSCLILST-LKSFEIYNVHPV------AHIMSQEMRHLSKVRML 67
Query: 357 PDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416
++++ V + +W+ + ++ + +R+
Sbjct: 68 HRTNYVAFVTGVK-EVVHIWDDVKKQDVSRIKVD--APVKDLFLSREFIVVSY---GDVI 121
Query: 417 YQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT--------DSNL 468
+ +R + +L + + L D +
Sbjct: 122 SVFKFGNPWKRITDDIRFGGVCE--FSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179
Query: 469 LQEDHPVMSFTIDA-TDRLALLNVSTQG------------VHLWDLRDRILLRKFQ-GVT 514
Q+ I A T+ + ++ ++ + + ++ D +L+R+F+ G+
Sbjct: 180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239
Query: 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA--------TLSGHTRTVSCVA 566
+ + + +A S+ ++++ + + + S
Sbjct: 240 RAD--VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCN 297
Query: 567 WNP-----VYHQMIASVSDDCTVRIW 587
+ V IA +S+ V +W
Sbjct: 298 FKLSVDKHVRGCKIAWISESSLVVVW 323
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 70.4 bits (172), Expect = 3e-13
Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 40/285 (14%)
Query: 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401
+ V ++ D S L++ ++N+ + + S
Sbjct: 14 PENHVSNPVTDYEFNQDQS-CLILSTLKS--FEIYNVHP-VAHIMSQEMRHLSKVRMLHR 69
Query: 402 RDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSV------LAADTHHRI 455
+ FV G + D + V+ + + K + + I
Sbjct: 70 TNYVAFVTGVKEVVH--------IWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVI 121
Query: 456 RTYNFE-----HLTDSN----------LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWD 500
+ F D LL + I T + + +TQ +
Sbjct: 122 SVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQ 181
Query: 501 LRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG-KVYIWHVKRELPIATLSGHT 559
+ T + D VA+ S+DG + ++ + + +
Sbjct: 182 KAILGKGVLIKAHTNPIKMVRLNRKS---DMVATCSQDGTIIRVFKTEDGVLVREFRRGL 238
Query: 560 R--TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLASS 602
V + W+ +A VSD T+ ++ + + H
Sbjct: 239 DRADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKG 282
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 9e-11
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI-IWDVDPVTFTCQHRKTLEGHT--L 348
++ H + + + + +AT S+D T+I ++ T +
Sbjct: 186 GKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFK----TEDGVLVREFRRGLDRA 241
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381
V + WS D S L VV D L V+ I +
Sbjct: 242 DVVDMKWSTDGSKLAVVS--DKWTLHVFEIFND 272
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 41/319 (12%), Positives = 81/319 (25%), Gaps = 51/319 (15%)
Query: 294 TQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
+++ + + V IWD Q ++ V
Sbjct: 51 AHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV----KKQDVSRIKVDA-PVKD 105
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWN----IETELLRVKLNHSPEDSLT-SCSWNRDGTKF 407
L S + ++V + N I ++ + L S +N
Sbjct: 106 LFLSRE--FIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163
Query: 408 VCGGIRGQFYQCDIEGQVLDSWEGVR--------VNCLWCRSDGKSV-LAADTHHRIRTY 458
G D Q + + V + IR +
Sbjct: 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223
Query: 459 NFEHLTDSNLLQE----DHPV----MSFTIDATDRLALLNVSTQG-VHLWDLRDR----- 504
D L++E M ++ D + L VS + +H++++ +
Sbjct: 224 K---TEDGVLVREFRRGLDRADVVDMKWSTDGS---KLAVVSDKWTLHVFEIFNDQDNKR 277
Query: 505 ------ILLRKFQGVT-QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS- 556
I ++ FQ F + +A SE V +W R + +
Sbjct: 278 HALKGWINMKYFQSEWSLCNFKLSVDKH-VRGCKIAWISESSLVVVWPHTRMIETFKVVF 336
Query: 557 GHTRTVSCVAWNPVYHQMI 575
+ + MI
Sbjct: 337 DDEMERWLIQMDQREQLMI 355
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 2e-18
Identities = 29/318 (9%), Positives = 75/318 (23%), Gaps = 85/318 (26%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352
T H +++ + S D + +WD + + ++ V
Sbjct: 8 TANAGKAHDADIFSVSACNSFT--VSCSGDGYLKVWDNKLLD---NENPKDKSYSHFV-- 60
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412
H+ + H + +
Sbjct: 61 ------------------HKSGL-------------HHVDVLQAIERDAFELCLVATTSF 89
Query: 413 RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472
G + + + H + D
Sbjct: 90 SG-------DLLFYRITREDETKKVIFEKLDLL-DSDMKKHSFWALKWGASNDR---LLS 138
Query: 473 HPVMSFTIDATDRLALLNVSTQGVHLWDLR-----DRILLRKFQGVTQGQFTIHSCFGGA 527
H +++ + T ++W L + + Q T+ S +
Sbjct: 139 HRLVATDVKGT------------TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186
Query: 528 NQ----DF-----VASGSEDGKVYIW------HVKRELPIATLSGHTRTVSCVAWNPVYH 572
D +A+G +G V I + ++ ++ ++ V ++P
Sbjct: 187 QFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ-G 245
Query: 573 QMIASVSDDCT---VRIW 587
++A D + + ++
Sbjct: 246 SLLAIAHDSNSFGCITLY 263
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 7e-16
Identities = 45/332 (13%), Positives = 89/332 (26%), Gaps = 72/332 (21%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ + V FS D L +D T + ++ H+
Sbjct: 72 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK----LDLLDSDMKKHSFWAL 127
Query: 352 YLAWSPD--SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409
S D SH LV ++W + E + + +W+
Sbjct: 128 KWGASNDRLLSHRLVATDVKGT-TYIWKFHP--------FADESNSLTLNWSPTLEL--- 175
Query: 410 GGIRGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLA------------ADTHHRI 455
++S + G +A T +
Sbjct: 176 -------------QGTVESPMTPSQFATSVDISERGL--IATGFNNGTVQISELSTLRPL 220
Query: 456 RTYNFEHLTDSNLLQEDHPVMS--FTIDATDRLAL--LNVSTQGVHLWDLRDRILLRKFQ 511
+ +H ++ + + S F+ + LA+ + S + L++ +
Sbjct: 221 YNFESQHS----MINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLS 275
Query: 512 GVTQGQFTIHSCFGGANQ----------DFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561
T F ++ + + S DGK+ W VK + I TL+ H
Sbjct: 276 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD 335
Query: 562 V----SCVAWNPVYHQMIASVS-DDCTVRIWG 588
+ +A + +A D G
Sbjct: 336 IEIEEDILAVDEH-GDSLAEPGVFDVKFLKKG 366
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 4e-13
Identities = 22/126 (17%), Positives = 32/126 (25%), Gaps = 16/126 (12%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE 344
+ + + H V F+ G L + D + WDV T + TL
Sbjct: 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK----TKERITTLN 330
Query: 345 GHTLGVAY----LAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCS 399
H + LA L G D W +SL
Sbjct: 331 MHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGM-------GADLNESLCCVC 383
Query: 400 WNRDGT 405
+R
Sbjct: 384 LDRSIR 389
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 3e-12
Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 17/142 (11%)
Query: 286 KEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTT---VIIWDVD---------PV 333
+ + E+ + ++ + + KFSP G LA + + +++ +
Sbjct: 218 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP 277
Query: 334 TFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSP- 391
T + Q H+ V L+++ L D +L W+++T E + H
Sbjct: 278 THSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWD-GKLRFWDVKTKERITTLNMHCDD 335
Query: 392 -EDSLTSCSWNRDGTKFVCGGI 412
E + + G G+
Sbjct: 336 IEIEEDILAVDEHGDSLAEPGV 357
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 9e-10
Identities = 34/326 (10%), Positives = 74/326 (22%), Gaps = 78/326 (23%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLK---LATGSKDTTVIIWDV--------------DPVT 334
+ H S D L L T IW P
Sbjct: 114 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 173
Query: 335 FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSP-- 391
++ + + S L+ G + + + + T L +
Sbjct: 174 ELQGTVESPMTPSQFATSVDISERG--LIATGFNN-GTVQISELSTLRPLYNFESQHSMI 230
Query: 392 --EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAA 449
+S+ S ++ G+ +S+ + L+ G+ +
Sbjct: 231 NNSNSIRSVKFSPQGSLLAIAH-------DS------NSFGCIT---LYETEFGERI--- 271
Query: 450 DTHHRIRTYNFEHLTDSNLLQEDHPVMS--FTIDATDRLALLNVS-----TQGVHLWDLR 502
+ VMS F L S + WD++
Sbjct: 272 ---GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLC----SAGWDGK--LRFWDVK 321
Query: 503 DRILLRKFQGVTQG-QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561
+ + + + D +A ++ R +
Sbjct: 322 TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR---SGMGADL--- 375
Query: 562 VSCVAWNPVYHQMIASVSDDCTVRIW 587
++ + V D ++R +
Sbjct: 376 ----------NESLCCVCLDRSIRWF 391
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 9/49 (18%)
Query: 539 GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
KV+I H + V+ S S D +++W
Sbjct: 2 SKVFIATAN------AGKAHDADIFSVSACN---SFTVSCSGDGYLKVW 41
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 14/93 (15%), Positives = 25/93 (26%), Gaps = 26/93 (27%)
Query: 530 DFVASGSEDGKVYIW-------------------------HVKRELPIATLSGHTRTVSC 564
F S S DG + +W HV I + V+
Sbjct: 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86
Query: 565 VAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSP 597
+++ +D T ++ L+ S
Sbjct: 87 TSFSG-DLLFYRITREDETKKVIFEKLDLLDSD 118
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 86.1 bits (212), Expect = 7e-18
Identities = 31/298 (10%), Positives = 74/298 (24%), Gaps = 57/298 (19%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS-------- 360
+ + + I+ ++ T C +T+ V L W
Sbjct: 169 LNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCL 228
Query: 361 ---------HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
+ L + E L + L S + S VCG
Sbjct: 229 SFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTT----VVCGF 284
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
G + D+ + S I + + + +
Sbjct: 285 KNGFVAEFDLT-----------------DPEVPSFYDQVHDSYILSVSTAYSDFED---- 323
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
V + +D ++++ +D + +G + + +
Sbjct: 324 -TVVSTVAVDGY------------FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
+ + + + L T++ + + H M+ + S D ++ I
Sbjct: 371 I-YSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNA 426
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 71.8 bits (175), Expect = 2e-13
Identities = 43/349 (12%), Positives = 101/349 (28%), Gaps = 34/349 (9%)
Query: 277 SLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLK------LATGSKDTTVIIWDV 330
S + C Q + EVW K+ L+ S++ T+ ++
Sbjct: 183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEI 242
Query: 331 DP-------VTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE-- 381
+ TL + S +V G ++ + +++
Sbjct: 243 IDNATDVHVFKMCEKPSLTLSLAD--SLITTFDFLSPTTVVCGFKNGF-VAEFDLTDPEV 299
Query: 382 -LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCR 440
+++ S S+++ + + T + G FY + + R
Sbjct: 300 PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359
Query: 441 S-----DGKSVLAADTHHRIRTYN-FEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ 494
S + +D +R L+ + + + + + +L S
Sbjct: 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPM-VLAGSAD 418
Query: 495 G-VHLWDLRDRIL-LRKFQGVTQGQFTIHSC-FGGANQDFVASGSEDGKVYIWHVKRELP 551
G + + + R+L K TQ + + + + S + ++
Sbjct: 419 GSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTV---NDVS 475
Query: 552 IATLSGHTRTVSCVAWNP--VYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
A + H ++C WN + A + + + L + H
Sbjct: 476 KAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEHHHHHH 524
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 2e-10
Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 5/163 (3%)
Query: 441 SDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLW 499
+G + + F+ +L + T D ++ G V +
Sbjct: 233 QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEF 292
Query: 500 DLRD-RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558
DL D + Q ++ + + V++ + DG YI++ K T
Sbjct: 293 DLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352
Query: 559 TRTVSC--VAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHL 599
R + V + P + I S ++R P +
Sbjct: 353 FRGSNLVPVVYCPQIYSYIYSDGAS-SLRAVPSRAAFAVHPLV 394
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 86.1 bits (212), Expect = 1e-17
Identities = 41/310 (13%), Positives = 83/310 (26%), Gaps = 58/310 (18%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
F LA + V I+ V + + + + +L+V+ +
Sbjct: 25 FDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-----DRSAIKEMRFVKG-IYLVVINAK 78
Query: 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS 428
D ++V ++ ++ + + +TS + + G G DI+ D
Sbjct: 79 DT--VYVLSLYSQKVLTTVFV--PGKITSIDTDASLDWMLIGLQNGSMIVYDIDR---DQ 131
Query: 429 WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLAL 488
+++ L KS P++S + D +
Sbjct: 132 LSSFKLDNLQ-----KSSFFPAARL-------------------SPIVSIQWNPRDIGTV 167
Query: 489 LNVSTQGVHLWDLRDRILLRKFQGV---------------TQGQFTIHSCFGGANQDFVA 533
L + L + + + F + + N +
Sbjct: 168 LISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227
Query: 534 SGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593
+ ED + W I RTV N I S + +I +
Sbjct: 228 TIHEDNSLVFWDANSGHMIM-----ARTVFETEINVPQPDYIRDSSTNAA-KISKVYWMC 281
Query: 594 NKSPHLASSL 603
+P S L
Sbjct: 282 ENNPEYTSLL 291
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 6e-11
Identities = 26/317 (8%), Positives = 83/317 (26%), Gaps = 43/317 (13%)
Query: 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVD-------PVTFTCQHRKTLEGHTLGVAYLA 354
++ + G ++ ++I++D+D + + + +
Sbjct: 99 GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP----------------EDSLTSC 398
W+P +++ E + +E E+ + + P +
Sbjct: 159 WNPRDIGTVLISYEYVTLTY-SLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQS 217
Query: 399 SWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG----VRVNCLWCRSDGKSVLAADTHH 453
++ + + D G ++ + + V D + A +
Sbjct: 218 LYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKV 277
Query: 454 RIRTYNFEHLT------DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507
N T S ++ + + T R ++ + + + + +
Sbjct: 278 YWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIF 337
Query: 508 RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567
I + Q +G + + + + L +
Sbjct: 338 -----PLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETML---YPSGIFTDK 389
Query: 568 NPVYHQMIASVSDDCTV 584
++ Q ++ + T
Sbjct: 390 ASLFPQNLSWLRPLATT 406
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 7e-10
Identities = 38/336 (11%), Positives = 93/336 (27%), Gaps = 46/336 (13%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY------ 352
+V + P+ L + T +D +++ WD + + +T+ + V
Sbjct: 209 KRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN--SGHMIMARTVFETEINVPQPDYIRD 266
Query: 353 ----------LAW----SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSC 398
+ W +P+ + LL+ L + L ++P S+TS
Sbjct: 267 SSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS-----LTMIDLGYTPRYSITSY 321
Query: 399 SWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCR-SDGKSVLAADTHHRIRT 457
+ + + + +++ R + + + +L + I T
Sbjct: 322 E---GMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIET 378
Query: 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517
+ ++ +S+ +V + + +G G
Sbjct: 379 MLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKG---GV 435
Query: 518 FTIHSCFGGANQDFVASGSEDGKVYIW-----------HVKRELPIATLSGHTRTVSCVA 566
T +G +G V I+ + L V ++
Sbjct: 436 RTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKIS 495
Query: 567 WNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLASS 602
+ +A + V ++ +N S
Sbjct: 496 FAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPE 530
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 7e-10
Identities = 39/324 (12%), Positives = 88/324 (27%), Gaps = 39/324 (12%)
Query: 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR--------------- 340
+ +++P + S + + + + V +
Sbjct: 146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTLTYSL--VENEIKQSFIYELPPFAPGGDFS 203
Query: 341 -KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCS 399
KT E T V + P+S H ++ ED + L W+ + + + +
Sbjct: 204 EKTNEKRTPKVIQSLYHPNSLH-IITIHED-NSLVFWDANSGHMIMARTVFETEINVPQP 261
Query: 400 WNRDGTKFVCGGIRGQFYQCD------IEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH 453
+ I ++ C+ S L G + + T +
Sbjct: 262 DYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSY 321
Query: 454 RIRTYNFEHLTDSNL--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511
+ + + L + P+++ G+ L L + +
Sbjct: 322 EGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLY 381
Query: 512 GVTQGQFTIHS-------CFGGANQDFVASGSEDGKVYIWHV-KRELPIATLSGHTRTVS 563
G FT + + + S K+++ + + L G RT
Sbjct: 382 --PSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKR 439
Query: 564 CVAWNPVYHQMIASVSDDCTVRIW 587
Y + + +VRI+
Sbjct: 440 QKLPAE-YGTAFITGHSNGSVRIY 462
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 4e-07
Identities = 27/250 (10%), Positives = 72/250 (28%), Gaps = 22/250 (8%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD 358
+ + +F L + TV + + + + T+ + +
Sbjct: 56 EDRSAIKEMRFVKGI-YLVVINAKDTVYVLSLY----SQKVLTTVFVPG-KITSIDTDAS 109
Query: 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ 418
+++G ++ + V++I+ + L + + I +
Sbjct: 110 LDW-MLIGLQN-GSMIVYDIDR-------DQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160
Query: 419 CDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSF 478
G VL S+E V + + + + + + +N + V+
Sbjct: 161 PRDIGTVLISYEYVTL--TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK-VIQS 217
Query: 479 TIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED 538
+ + WD ++ T + I+ +D + ++
Sbjct: 218 LYHPNSLHIITIHEDNSLVFWDANSGHMI---MARTVFETEINVPQPDYIRDSSTNAAKI 274
Query: 539 GKVYIWHVKR 548
KVY W +
Sbjct: 275 SKVY-WMCEN 283
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 2e-05
Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 9/125 (7%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV------DPVTFTCQHRKTLE-GHTLG 349
L + G TG + +V I+D D +F +TL L
Sbjct: 431 LKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA 490
Query: 350 VAYLAWSPDSSHLLVVGPEDCH-ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV 408
V ++++ ++ L V E L+ + + S + + ++ + T V
Sbjct: 491 VDKISFAAETL-ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGV 549
Query: 409 CGGIR 413
+R
Sbjct: 550 LVDVR 554
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 76.5 bits (187), Expect = 5e-15
Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 22/174 (12%)
Query: 299 DHCDEVWFCKFSPDGLKLA----TGSKDTTVIIWDVD-------PVTFTCQHRKTLEGHT 347
+ S D L L+ + + + +DV + K L+
Sbjct: 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG 149
Query: 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKF 407
V + W+P ++ V D + V + TE ++V ++TS W+ G +
Sbjct: 150 GMVIDMKWNPTVPSMVAVCLAD-GSIAVLQV-TETVKVCATLPSTVAVTSVCWSPKGKQL 207
Query: 408 VCGGIRGQFYQCDIEGQV---------LDSWEGVRVNCLWCRSDGKSVLAADTH 452
G G Q Q +S VRV + +
Sbjct: 208 AVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA 261
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 8e-09
Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 17/175 (9%)
Query: 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST 493
+ ++ D ++I L ++ ++ + D L+ +S+
Sbjct: 59 LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVP---MKFPIHHLALSCD-NLTLSACMMSS 114
Query: 494 QG---VHLWDLRD---------RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541
+ + +D+R R G I + VA DG +
Sbjct: 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174
Query: 542 YIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKS 596
+ V + + T V+ V W+P Q +A + TV + P L K
Sbjct: 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPTLQEKKV 228
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 51.1 bits (121), Expect = 7e-07
Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL--EGHTLGVAY 352
V +SP G +LA G ++ TV+ + H + V
Sbjct: 186 CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLD 245
Query: 353 LAWSPDSSHLLVVGPED 369
+ W +V D
Sbjct: 246 VLWIGTYVFAIVYAAAD 262
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 9e-06
Identities = 35/234 (14%), Positives = 62/234 (26%), Gaps = 23/234 (9%)
Query: 285 TKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE 344
+ EE P E + +L GL++ DP + + L
Sbjct: 30 SPEELPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV 89
Query: 345 GHTLGVAYLAWSPDSSHLLV--VGPEDCHELWVWNIET----------ELLRVKLNHSPE 392
+ +LA S D+ L + E + +++ T KL
Sbjct: 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG 149
Query: 393 DSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLA 448
+ WN G + V V V + GK +
Sbjct: 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAV 209
Query: 449 ADTHHRIRTYNFE-----HLTDSNLLQEDHP--VMSFTIDATDRLALLNVSTQG 495
+ + Y + + DHP V+ T A++ + G
Sbjct: 210 GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADG 263
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 72.1 bits (176), Expect = 1e-13
Identities = 48/349 (13%), Positives = 103/349 (29%), Gaps = 61/349 (17%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK-------TLEGHTLGVAY 352
D + +F+ G LATG K V+I+ + H + T + H Y
Sbjct: 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDY 86
Query: 353 L------------AWSPDSSHLLVVGPEDCHELWVWNIETELLRVK-LNHSPEDSLTSCS 399
L W P + + + + +W I R + N ED
Sbjct: 87 LKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDP 146
Query: 400 WNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAA--------DT 451
+ + ++ + +N + SD ++ L+A
Sbjct: 147 TTVTTLRVPVFRPMDLMVEASPR-RIFANAHTYHINSISINSDYETYLSADDLRINLWHL 205
Query: 452 HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRD------- 503
R++N + +N+ + + + + S++G + L D+R
Sbjct: 206 EITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265
Query: 504 -RILLRKFQGVTQGQFTIHSCFGGA-----NQDFVASGSEDGKVYIWHVKRE-LPIATLS 556
++ + F+ + ++ + V +W + E P+ T
Sbjct: 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-YLSVKVWDLNMENRPVETYQ 324
Query: 557 GHTRTVSC---------------VAWNPVYHQMIASVSDDCTVRIWGPH 590
H S WN ++ + S + R++ +
Sbjct: 325 VHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRN 372
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 58.2 bits (140), Expect = 4e-09
Identities = 25/214 (11%), Positives = 58/214 (27%), Gaps = 20/214 (9%)
Query: 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVR 433
W V + + D +++ +N G G G+ E +
Sbjct: 10 IQWCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRG 69
Query: 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST 493
++ H Y + + + + + LL+ +
Sbjct: 70 EYNVYSTFQS--------HEPEFDYLKSLEIEEKINK-----IRWLPQKNAAQFLLSTND 116
Query: 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553
+ + LW + +R + + + D V +
Sbjct: 117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN-- 174
Query: 554 TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
HT ++ ++ N Y + S +DD + +W
Sbjct: 175 ---AHTYHINSISINSDY-ETYLS-ADDLRINLW 203
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 3e-08
Identities = 40/304 (13%), Positives = 79/304 (25%), Gaps = 62/304 (20%)
Query: 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD----PVTFTCQHRKTLEGHTLGVAY 352
N H + + D + + D + +W ++ +E T +
Sbjct: 173 ANAHTYHINSISINSDYETYLS-ADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITA 231
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412
+ P+S + V + + D S +R F
Sbjct: 232 AEFHPNSCNTFVYSSSK-GTIRLC----------------DMRASALCDRHSKLFEEPE- 273
Query: 413 RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED 472
D + S ++ + G+ ++ D Y + D N E+
Sbjct: 274 -------DPSNRSFFSEIISSISDVKFSHSGRYMMTRD-------YLSVKVWDLN--MEN 317
Query: 473 HPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV 532
PV ++ + R L L + F C + V
Sbjct: 318 RPVETYQVHEYLR----------SKLCSLYE----------NDCIFDKFECCWNGSDSVV 357
Query: 533 ASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592
+GS + ++ + I + P ++ AS I L+
Sbjct: 358 MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKP--RKVCASGKRK-KDEISVDSLD 414
Query: 593 TNKS 596
NK
Sbjct: 415 FNKK 418
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 3e-08
Identities = 23/167 (13%), Positives = 46/167 (27%), Gaps = 27/167 (16%)
Query: 295 QVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE--------- 344
+ + + + +F P S T+ + D+ +H K E
Sbjct: 220 ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRS 279
Query: 345 ---GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDS------- 394
++ + +S +++ +W N+E + H S
Sbjct: 280 FFSEIISSISDVKFSHSGRYMMTRDYLSVK-VWDLNMENRPVETYQVHEYLRSKLCSLYE 338
Query: 395 ------LTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVN 435
C WN + + G F D + + E R N
Sbjct: 339 NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASREN 385
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 7e-05
Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 15/102 (14%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP---VTFTCQHRKTLEGHT 347
++ + KFS G + T +V +WD++ T Q + L
Sbjct: 275 PSNRSFFSEIISSISDVKFSHSGRYMMTRD-YLSVKVWDLNMENRPVETYQVHEYLRSKL 333
Query: 348 LGVAY---------LAWSPDSSHLLVVGPEDCHELWVWNIET 380
+ W+ S ++ G + +++ T
Sbjct: 334 CSLYENDCIFDKFECCWNGSDSV-VMTGSYNNF-FRMFDRNT 373
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 6e-04
Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 16/136 (11%)
Query: 267 TKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI 326
+ E+ + L LC+ E ND + + C ++ + TGS +
Sbjct: 317 NRPVETYQVHEYLRSKLCSLYE---------NDCIFDKFECCWNGSDSVVMTGSYNNFFR 367
Query: 327 IWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386
++D T + P G E+ V +++ +
Sbjct: 368 MFDR----NTKRDITLEASRENNKPRTVLKPRKV--CASGKRKKDEISVDSLDFNKKILH 421
Query: 387 LNHSP-EDSLTSCSWN 401
P E+ + + N
Sbjct: 422 TAWHPKENIIAVATTN 437
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 71.7 bits (175), Expect = 2e-13
Identities = 44/318 (13%), Positives = 93/318 (29%), Gaps = 47/318 (14%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
+ KL + D+ P + L + D S L+
Sbjct: 69 NENENKKLKSNKGDSIKRTAAKVP-----SPGLGAPPIYSYIRNLRLTSDESRLIACADS 123
Query: 369 DCHELWVWNIETE---LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV 425
D L V++++ +L+++ + S D T + G Y DI
Sbjct: 124 D-KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP 182
Query: 426 LDSWEGV-------RVNCLWCRSDG---KSVLAADTHHRIRTYNFE--HLTDSNLLQEDH 473
+ + + + D + ++ +D I+ ++ + D L H
Sbjct: 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242
Query: 474 PVMSFTIDATDRLALLNVSTQG---VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD 530
V S L +S G + WD + L F + + ++ A
Sbjct: 243 FVSSICCGKDYLL----LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQH-LAPPR 297
Query: 531 FVASGSEDGKV---YIWHVKRELPIATLSGHTRTVSCVAWNP------VYHQMI------ 575
F ++ + I K +A T+ + + + Q+I
Sbjct: 298 FQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNV 357
Query: 576 ---ASVSDDCTVRIWGPH 590
++ +D+ V +
Sbjct: 358 ISLSAHNDEFQVTLDNKE 375
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 69.7 bits (170), Expect = 7e-13
Identities = 25/265 (9%), Positives = 66/265 (24%), Gaps = 40/265 (15%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS--SHLLVVG 366
+ D + K V D++ + ++ + GH + + DS ++
Sbjct: 157 IAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITS 216
Query: 367 PEDCHELWVWNIET--ELLRVKLNH---------SPEDSLTSCS-------WN------- 401
D H + + + + + H + L S W+
Sbjct: 217 DRDEH-IKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNL 275
Query: 402 --RDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHR-IRTY 458
D + + Q + V+ + + V + I
Sbjct: 276 STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335
Query: 459 NFEHLTDSNL-----LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
+L + + V+S + + L+ + I +
Sbjct: 336 EMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN----L 391
Query: 514 TQGQFTIHSCFGGANQDFVASGSED 538
+ F +++ + +
Sbjct: 392 NENSFVVNNEKSNEFDSAIIQSVQG 416
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 2e-05
Identities = 11/127 (8%), Positives = 32/127 (25%), Gaps = 13/127 (10%)
Query: 473 HPVMSFTIDATDRLALLNVSTQGVHLWDL------------RDRILLRKFQGVTQGQFTI 520
HP+ + L + + + + D + T +
Sbjct: 5 HPLQNLLTSRDGSL-VFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQ 63
Query: 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580
N++ ++ + K P + + ++IA
Sbjct: 64 GQSSENENENKKLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADS 123
Query: 581 DCTVRIW 587
D ++ ++
Sbjct: 124 DKSLLVF 130
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 69.0 bits (168), Expect = 8e-13
Identities = 14/179 (7%), Positives = 42/179 (23%), Gaps = 22/179 (12%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
E D L LA S D + ++++ + + + + ++ +
Sbjct: 169 SDVEYSSGVLHKDSLLLALYSPDGILDVYNLS--SPDQASSRFPVDEEAKIKEVKFADNG 226
Query: 360 SHLLVVGPEDCHELWVWNIE----TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG---- 411
++V + +++ T + + + G +
Sbjct: 227 YWMVVECDQTVV---CFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN 283
Query: 412 -IRGQFYQCDIEGQVLDSWEGVR--------VNCLWCRSDGKSVLAADTHHRIRTYNFE 461
+ + + D + + DG T+
Sbjct: 284 SLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDSFNIVALT 342
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 7e-11
Identities = 38/302 (12%), Positives = 82/302 (27%), Gaps = 27/302 (8%)
Query: 308 KFSPDGLKLATGSKDTTVIIWDV-DPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366
D +D + + D T T A ++ P + LL++
Sbjct: 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPC-NRLLLLY 101
Query: 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW--NRDGTKFVCGGIRGQFYQCDIEG- 423
P + ++ + + +T + ++ + + + F+ RG E
Sbjct: 102 PGN--QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD 159
Query: 424 ---QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD-SNLLQEDH--PVMS 477
V + V + D + + YN S+ D +
Sbjct: 160 SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKE 219
Query: 478 FTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC------------FG 525
A + ++ Q V +DLR + + T +F +
Sbjct: 220 VKF-ADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278
Query: 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
+ + D K W E + L T + + + A + + +
Sbjct: 279 SNESNSLTIYKFDKKTKNWTKDEESAL-CLQSDTADFTDMDVVCGDGGIAAILKTNDSFN 337
Query: 586 IW 587
I
Sbjct: 338 IV 339
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 8e-09
Identities = 15/130 (11%), Positives = 37/130 (28%), Gaps = 10/130 (7%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK-TLEGHTLG 349
+++ D ++ KF+ +G + D TV+ +D+ T + T+ G
Sbjct: 204 QASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTG 262
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELW--------VWNIETELLRVKLNHSPEDSLTSCSWN 401
+++ E W + E + + + +
Sbjct: 263 TVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCG 322
Query: 402 RDGTKFVCGG 411
G +
Sbjct: 323 DGGIAAILKT 332
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 1e-05
Identities = 64/367 (17%), Positives = 105/367 (28%), Gaps = 108/367 (29%)
Query: 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAW----SPDSSHL 362
CK D K ++ II D V+ G L W +
Sbjct: 35 CKDVQDMPKSILSKEEIDHIIMSKDAVS--------------GTLRLFWTLLSKQEEMVQ 80
Query: 363 LVVGPEDCHEL---WVWN-IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFY 417
V E+ + ++ + I+TE + + +N D F + R Q Y
Sbjct: 81 KFV--EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYNVSRLQPY 137
Query: 418 QCDIEG-QVLDSWEGVRVN----CLWCRSDGKSVLAADT---HHRIRTYNFE-------- 461
+ L + V ++ GK+ +A D + +F+
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGS------GKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 462 ---------------HLTDSNLLQEDHPVMSFTI---DATDRL-----------ALL--- 489
+ D N + + L LL
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251
Query: 490 NVSTQGVHLW---DLRDRILL--RKFQGVT---QGQFTIHSCFGGANQDFVASGSED--G 539
NV W +L +ILL R F+ VT T H + +
Sbjct: 252 NVQNAKA--WNAFNLSCKILLTTR-FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 540 KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI--WGPHLNTNKSP 597
K Y+ ++LP L+ + R +S +IA D W H+N +K
Sbjct: 309 K-YLDCRPQDLPREVLTTNPRRLS----------IIAESIRDGLATWDNW-KHVNCDKLT 356
Query: 598 H-LASSL 603
+ SSL
Sbjct: 357 TIIESSL 363
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 1e-05
Identities = 75/609 (12%), Positives = 158/609 (25%), Gaps = 209/609 (34%)
Query: 127 QHIMDGDWSKADHDLND-LEYLLDS-RGDL----VE--MKFLILEQKYLEYLEDGRVLDA 178
H MD + + + D L D+ + V+ K ++ +++ + +
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 179 LHVLRNELTPLNHNTAK--VHELS----SFMMCSGVEQLLERAKWDGKGSQSRTKLMDKL 232
L L + V E+ F+M + + + + R +L +
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 233 QSFLPPTVMLPPR-----RLQTLLSQA--------------------------------- 254
Q F V R +L+ L +
Sbjct: 124 QVFAKYNV---SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 255 ------VDLQKYHCPYHNTKVDESLENVSLLVDH-LCTKEEFPCETTQVLND-------- 299
++L+ + P V E L+ + +D ++ + ++
Sbjct: 181 DFKIFWLNLKNCNSP---ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237
Query: 300 -------HC----DEVW-------F---CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQ 338
+C V F CK L T ++ V D ++
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKI------LLT-TRFKQVT----DFLSAATT 286
Query: 339 HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP------- 391
+L+ H++ + + LL ++ +L R L +P
Sbjct: 287 THISLDHHSMTLT----PDEVKSLL--------LKYLDCRPQDLPREVLTTNPRRLSIIA 334
Query: 392 ----EDSLTSCSWNRDGTKFVCGGI------------RGQFYQC-------DIEGQVLDS 428
+ T +W + I R F + I +L
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
Query: 429 WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTI-DATDRLA 487
+W V+ + L +L+++ + +I L
Sbjct: 395 --------IWFDVIKSDVM------VV----VNKLHKYSLVEKQPKESTISIPSIYLELK 436
Query: 488 LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI-WHV 546
+ + +H R ++ + I F + D + D Y H+
Sbjct: 437 VKLENEYALH------RSIVDHYN--------IPKTF--DSDDLIPP-YLDQ--YFYSHI 477
Query: 547 KRELPIATLSGHT---RTV-------------SCVAWNPVYHQMIASVSDDCT-VRIWGP 589
L R V AWN S+ + ++ + P
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS-----GSILNTLQQLKFYKP 532
Query: 590 HLNTNKSPH 598
++ + P
Sbjct: 533 YI-CDNDPK 540
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 9e-05
Identities = 25/177 (14%), Positives = 45/177 (25%), Gaps = 17/177 (9%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKD--------TTVIIWDVDPVTFTCQHRK 341
++ +D V + SPDG + + D T + V R
Sbjct: 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235
Query: 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH-----SPEDSLT 396
L G +A W+PD S ++ L + T P +
Sbjct: 236 LLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG 295
Query: 397 SCSWNRDGTKFVCGGI---RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAA 449
+ + D E G+++D+ G +
Sbjct: 296 MRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGV 352
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Length = 337 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 3e-04
Identities = 32/317 (10%), Positives = 83/317 (26%), Gaps = 59/317 (18%)
Query: 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375
+ ++ +++ D T+ +P + L
Sbjct: 4 ILAPARPDKLVVID--TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-ESLVK 60
Query: 376 WNIET--ELLRVKLNHSPE--DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--------- 422
++ T L R+ L+ E SL + + DG + E
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 423 ----GQVLDSWE-GVRVNCLWCRSDGKSVLAA---------DTHHRIRTYNFEHLTDSNL 468
++E ++ L DG + + + +
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180
Query: 469 LQEDHPVMSFTIDATDRLALLNVSTQ-------------GVHLWDLR-DRILLRKFQGVT 514
Q D + +++ +A + + G+ DL + +R+ + +
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240
Query: 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP----V 570
F+ + F A + + +++ I + + V + V
Sbjct: 241 VFYFSTAVNPAK-TRAFGAYNV----LESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTV 294
Query: 571 YHQMIASVSDDCTVRIW 587
+ + D + +
Sbjct: 295 W---LGGALGD--LAAY 306
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 604 | |||
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.98 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.98 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.98 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.98 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.98 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.97 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.97 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.97 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.97 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.97 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.97 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.97 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.97 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.97 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.97 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.97 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.97 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.97 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.96 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.96 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.96 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.96 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.96 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.95 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.95 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.95 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.95 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.94 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.94 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.94 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.94 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.94 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.93 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.93 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.93 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.93 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.92 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.92 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.92 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.91 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.91 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.9 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.9 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.9 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.89 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.89 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.89 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.89 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.89 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.88 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.88 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.88 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.87 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.87 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.87 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.86 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.86 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.85 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.85 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.84 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.84 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.83 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.83 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.81 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.81 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.8 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.79 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.79 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.78 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.77 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.76 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.76 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.76 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.76 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.75 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.75 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.75 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.74 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.73 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.72 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.71 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.69 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.69 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.68 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.67 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.66 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.65 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.65 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.65 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.64 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.63 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.63 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.63 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.63 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.62 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.62 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.61 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.61 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.6 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.59 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.57 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.57 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.56 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.53 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.52 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.52 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.51 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.49 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.49 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.47 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.46 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.44 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.43 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.41 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.4 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.37 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.37 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.36 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.36 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.35 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.34 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.3 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.29 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.28 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.25 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.24 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.19 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.18 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.1 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.1 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.07 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.06 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.05 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 99.04 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.02 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.01 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.0 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.98 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.96 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.95 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.95 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.94 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.94 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.92 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.9 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.85 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.85 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.83 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.81 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.77 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.76 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.76 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.75 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.74 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.73 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.72 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.71 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.66 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.63 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.6 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.56 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.56 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.55 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.54 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.54 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.51 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.51 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.5 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.49 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.49 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.48 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.43 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.42 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.42 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.41 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.35 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.33 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.31 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.3 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.29 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.28 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.28 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 98.27 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.25 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.22 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.2 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.2 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.14 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.09 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.09 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.05 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 98.05 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 98.01 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 98.0 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.97 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.97 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.97 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.94 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.94 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.9 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.88 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.85 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.85 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.84 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.78 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.76 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.75 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.75 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.72 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.67 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.66 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.66 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.65 | |
| 2xtc_A | 90 | F-box-like/WD repeat-containing protein TBL1X; tra | 97.64 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.59 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.52 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 97.41 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.33 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.33 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.31 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.28 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 97.28 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.24 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.22 | |
| 1uuj_A | 88 | Platelet-activating factor acetylhydrolase IB ALP | 97.13 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.02 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 97.02 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.99 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.95 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.91 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.89 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 96.83 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.82 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.71 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 96.7 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 96.69 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 96.65 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.61 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.56 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 96.55 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.39 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 96.29 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 96.21 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.1 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.97 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.97 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.86 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 95.82 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.7 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.63 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.48 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 95.09 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 94.48 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.46 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 93.65 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 92.98 | |
| 1wp5_A | 323 | Topoisomerase IV; broken beta-propeller, hairpin-i | 92.31 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 91.91 | |
| 1suu_A | 312 | DNA gyrase subunit A; topoisomerase,DNA gyrase, be | 91.27 | |
| 3no0_A | 276 | DNA gyrase subunit A; DNA topology, topoisomerase, | 89.52 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 89.14 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 89.05 | |
| 3l6v_A | 370 | GYRA, DNA gyrase subunit A; gyrase A C-terminal do | 87.3 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 86.22 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 86.21 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 80.97 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 80.83 |
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=419.56 Aligned_cols=286 Identities=17% Similarity=0.295 Sum_probs=260.6
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
...+.+|.++|++++|+|++.+|++|+.||+|+|||+. +......+.+|...|.+++|+|++++|++|+.|+ +|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~----~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~--~i 174 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDSVQDISFDHSGKLLASCSADM--TI 174 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETT----TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS--CC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC----CCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC--eE
Confidence 35688999999999999999999999999999999998 5566788999999999999999999999999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++||+.+++++..+. +|...|.+++|+|+++++++|+.|+.|++||+ .+..+..+.+| .+.++.+++++..+++++
T Consensus 175 ~iwd~~~~~~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 175 KLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp CEEETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEeCCCCceeEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 999999998887775 78889999999999999999999999999999 57788888776 699999999999999999
Q ss_pred CCCeEEEEEcCCCccccc-ccCCCCeeEEEECCC--------------------CCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 451 THHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDAT--------------------DRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~--------------------~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
.|+.|++||+.+...... ..|...|.+++|+|+ +.++++|+.|+.|++||++++.++..
T Consensus 254 ~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 254 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 999999999988765544 457889999999996 67899999999999999999999999
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+.+|...+. .+.++|++++|++|+.||.|++||+.+++++.++.+|...|++++|+|+ +.+|+||+.||+|++|++
T Consensus 334 ~~~h~~~v~---~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 334 LVGHDNWVR---GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EECCSSCEE---EEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSS-SSCEEEEETTSEEEEEC-
T ss_pred EECCCCcEE---EEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeC
Confidence 999987544 4556799999999999999999999999999999999999999999999 789999999999999986
Q ss_pred C
Q psy10566 590 H 590 (604)
Q Consensus 590 ~ 590 (604)
+
T Consensus 410 r 410 (410)
T 1vyh_C 410 R 410 (410)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=354.94 Aligned_cols=291 Identities=19% Similarity=0.240 Sum_probs=258.6
Q ss_pred ccceeecccCCCcEEEEEEcCC----CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspd----g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
....+.+.+|.+.|++++|+|+ +.+|+||+.|++|+||++. .........+.+|...|.+++|+|++..+++++
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~--~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWR--DERLDLQWSLEGHQLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECC--CCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe
Confidence 3445678899999999999985 5699999999999999997 344556678899999999999999999999999
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDG 443 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g 443 (604)
.|+ +|++||+.+++.+..+. .+...+.+++|+|+++++++|+.||.|++||++ ++....+..+ .+.+++|+|++
T Consensus 100 ~D~--~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg 176 (321)
T 3ow8_A 100 LDA--HIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG 176 (321)
T ss_dssp TTS--EEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS
T ss_pred CCC--cEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC
Confidence 999 89999999999888776 566779999999999999999999999999994 5666555544 69999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
+++++++.|+.|++||+++++....+ .+..+|.+++|+|++++|++++.|+.|++||++++.....+.+|...+. .
T Consensus 177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~---~ 253 (321)
T 3ow8_A 177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL---N 253 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEE---E
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceE---E
Confidence 99999999999999999988765544 4788999999999999999999999999999999999999999988544 4
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+.++|++.+|++|+.||+|++||+.+++++.++.+|.+.|.+++|+|+ +.+|++++.||+|++||..
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~-g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN-GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEeCC
Confidence 556799999999999999999999999999999999999999999999 8899999999999999964
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-43 Score=354.48 Aligned_cols=290 Identities=18% Similarity=0.254 Sum_probs=256.0
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.+.+..++|.+|.+.|++++|+|++++|++|+.||+|+|||+. .......+..|...|.+++|+|+++++++++.|
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY----TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT----TCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred ccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC----CCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence 3456778999999999999999999999999999999999988 455677888999999999999999999999999
Q ss_pred CceEEEEEECCCce----EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcC
Q psy10566 369 DCHELWVWNIETEL----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRS 441 (604)
Q Consensus 369 ~~~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~ 441 (604)
+ .|++|++.++. ....+ .+|...|.++.|++++. +++++.|+.|++||+. ++.+..+.+| .|.+++|+|
T Consensus 119 ~--~v~iw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 119 N--ICSIYNLKTREGNVRVSREL-AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp C--EEEEEETTTCSBSCEEEEEE-ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred C--eEEEEECccCCCcceeEEEe-cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 8 89999998753 33333 37889999999998875 8999999999999994 6777777766 699999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
+++.+++++.|+.|++||+++......+ .|...|.+++|+|+++++++++.|+.|++||+++++.+..+... .....+
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~~~~v 273 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD-NIICGI 273 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC-Ccccce
Confidence 9999999999999999999987655444 47889999999999999999999999999999998887776532 222245
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.++.++|+++++++|+.||.|++||+.+++.+..+.+|.+.|++++|+|+ +.+|+||+.||+|+|||
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCC-CCEEEEEcCCccEEecC
Confidence 56677899999999999999999999999999999999999999999999 89999999999999997
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=344.45 Aligned_cols=292 Identities=25% Similarity=0.463 Sum_probs=262.3
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.....++.+|.+.|++++|+|+|++||+|+.||.|+||+.. .......+.+|...|.+++|+|++++|++++.|+
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~- 87 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY----DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK- 87 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC----CcccchhhccCCCceEEEEEcCCCCEEEEECCCC-
Confidence 35567899999999999999999999999999999999987 4456778899999999999999999999999998
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
.|++||+.+++....+. .|...|.+++|+|+++++++|+.|+.|++||+. ++.+..+..+ .+.+++|+|+++.++
T Consensus 88 -~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 88 -TLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp -EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred -EEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 89999999999888776 678899999999999999999999999999995 6777777665 699999999999999
Q ss_pred EEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~ 525 (604)
+++.|+.|++||+++......+ .+..++..++|+|+++++++++.|+.|++||+++++.+..+.+|......+...+.
T Consensus 166 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred EEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 9999999999999987654433 34668999999999999999999999999999999999999888766555544555
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe--CCCcEEEECCC
Q psy10566 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS--DDCTVRIWGPH 590 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s--~Dg~I~iW~~~ 590 (604)
.+++.++++|+.||.|++||+.+++.+..+.+|...|.+++|+|+ +.++++++ .|++|++|+.+
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~-~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS-SSEEEEEECTTTCCEEEEECC
T ss_pred eCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc-CCceEEEEccCCccEEEecCC
Confidence 678999999999999999999999999999999999999999999 88999987 69999999864
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=341.29 Aligned_cols=290 Identities=16% Similarity=0.190 Sum_probs=253.9
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+..++|.+|.+.|++++|+|+|++|++|+.||+|+|||+. +...+..+..|..+|.+++|+|++++|++++.|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~- 77 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE----TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF- 77 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS-
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC----CCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC-
Confidence 34567899999999999999999999999999999999998 5567788899999999999999999999999998
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-C-Ceeeeeece--eEEEEEEcC-CCCE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-G-QVLDSWEGV--RVNCLWCRS-DGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~-~~~~~~~~~--~v~~l~~s~-~g~~ 445 (604)
+|++||+.+++.+..+. +|...|.+++|+|+++++++|+.|++|++||++ + .....+.+| .|.+++|+| ++..
T Consensus 78 -~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 78 -RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp -EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred -EEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 89999999999888876 788999999999999999999999999999995 3 344556655 699999999 6789
Q ss_pred EEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
+++++.|+.|++||+......... .+...+..+.++| ++.++++++.|++|++||+++++++..+.+|...+ .
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v---~ 232 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV---S 232 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE---E
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE---E
Confidence 999999999999999876544333 3457788899886 67899999999999999999999999999998854 4
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc-EEEEEeCCCcEEEECCCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ-MIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~-~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.++|++.+|++|+.||+|++||..+++++.++..|...+.+++|+|+++. ++++|++|| +.+|++..
T Consensus 233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 4556799999999999999999999999999999999999999999998544 577877665 77777654
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-42 Score=348.69 Aligned_cols=291 Identities=19% Similarity=0.297 Sum_probs=254.1
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
++.+...+|.+|.+.|++++|+|++++||||+.||+|+|||.. +......+..|...|.+++|+|++..+++++.|
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~----~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF----TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TCCEEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred cccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECC----CCCcceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 4456788999999999999999999999999999999999987 445567778899999999999999999999999
Q ss_pred CceEEEEEECCCce------EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEE
Q psy10566 369 DCHELWVWNIETEL------LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWC 439 (604)
Q Consensus 369 ~~~~i~vwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~ 439 (604)
+ .+++|++.... ....+. .|...|.+++|+|++..+++++.|++|++||+ .++.+..+.+| .|.++.+
T Consensus 128 ~--~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~ 204 (354)
T 2pbi_B 128 N--KCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL 204 (354)
T ss_dssp S--EEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred C--CEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE
Confidence 8 89999986431 122222 57889999999999999999999999999999 57788888776 6889998
Q ss_pred cC--CCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc
Q psy10566 440 RS--DGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516 (604)
Q Consensus 440 s~--~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~ 516 (604)
+| +++.+++++.|+.|++||++++.....+ .|...|.+++|+|++.++++++.|++|++||+++++.+..+..+..
T Consensus 205 ~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~- 283 (354)
T 2pbi_B 205 APSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI- 283 (354)
T ss_dssp CCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC-
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc-
Confidence 87 5789999999999999999987765544 4788999999999999999999999999999999887776654332
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
...+.++.++|++.++++|+.||.|++||+.+++.+..+.+|.+.|++++|+|+ +.+|++|+.||+|+||+
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd-g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD-GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEC
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC-CCEEEEEcCCCCEEecC
Confidence 223445666899999999999999999999999999999999999999999999 89999999999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=343.42 Aligned_cols=299 Identities=19% Similarity=0.299 Sum_probs=241.4
Q ss_pred ccceeecccCCC-cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee-EEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCD-EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~-~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
..+++++.+|.+ .|++++|+|+|++||+|+.|++|+|||+. ....... ....+|...|.+++|+|++++|++++.|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~--~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEE--TTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcC--CCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC
Confidence 456788999998 99999999999999999999999999997 2222222 2346899999999999999999999999
Q ss_pred CceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC----Ceeeeeece--eEEEEEEc
Q psy10566 369 DCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG----QVLDSWEGV--RVNCLWCR 440 (604)
Q Consensus 369 ~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~--~v~~l~~s 440 (604)
+ ++++||+.++. +...+. +|...|.+++|+|++++|++|+.|+.|++||++. ..+..+.+| .|.+++|+
T Consensus 83 ~--~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 83 A--TTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp S--CEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred C--cEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 8 89999998764 344444 7889999999999999999999999999999953 234445554 69999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-------------
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR------------- 504 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~------------- 504 (604)
|+++++++++.|+.|++||...... .....|...|.+++|+|++++|++++.|++|++||....
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 9999999999999999999987642 234567889999999999999999999999999997432
Q ss_pred --ceeeEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc----c-----eEEeeCCCCCeeEEEEcCCCC
Q psy10566 505 --ILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL----P-----IATLSGHTRTVSCVAWNPVYH 572 (604)
Q Consensus 505 --~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~----~-----~~~l~~h~~~V~~v~~sp~~~ 572 (604)
.++..+.+ |... +..+.+++++..+++++.|+.|++|+...+. + .....+|...|++++|+|++.
T Consensus 240 ~~~~~~~~~~~h~~~---v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 316 (345)
T 3fm0_A 240 SWKCICTLSGFHSRT---IYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP 316 (345)
T ss_dssp EEEEEEEECSSCSSC---EEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST
T ss_pred ccceeEEecCCCCCc---EEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc
Confidence 22333333 4443 4445667999999999999999999987542 1 123458999999999999955
Q ss_pred cEEEEEeCCCcEEEECCCCCCCCCc
Q psy10566 573 QMIASVSDDCTVRIWGPHLNTNKSP 597 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~~~~~~~ 597 (604)
.+||||+.||+|++|++.+++...+
T Consensus 317 ~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 317 GLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TEEEEEETTSCEEEEEECC------
T ss_pred eEEEEcCCCCcEEEEEecCCCCccc
Confidence 7999999999999999998775433
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=335.96 Aligned_cols=292 Identities=15% Similarity=0.233 Sum_probs=254.8
Q ss_pred cceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCC-ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVT-FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~-~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
....+|.+|.+.|++++|+|++ ++|+||+.|++|++|++.... .....+..+.+|...|.+++|+|++++|++++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4567899999999999999965 799999999999999986221 12456788999999999999999999999999999
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCC-----
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSD----- 442 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~----- 442 (604)
+|++||+.+++....+. +|...|.+++|+|++.++++|+.|++|++||+++..+..+.+| .+.++.+.|.
T Consensus 88 --~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 88 --TLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp --EEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC-----
T ss_pred --EEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 89999999999888776 7889999999999999999999999999999999888888776 6899999985
Q ss_pred -CCEEEEEeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 443 -GKSVLAADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 443 -g~~l~~~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
+..+++++.|+.|++||+++..... ...|...|.+++|+|+++++++++.|+.|++||+.+++.+..+..+. .+
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~v 240 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD----EV 240 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS----CE
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC----cE
Confidence 4589999999999999998866543 44588999999999999999999999999999999999988887653 34
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--------CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG--------HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--------h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
..+.++|++.++++++.+ .+++|++..+..+..+.. |...|.+++|+|+ +.+|++|+.||+|+||++.++
T Consensus 241 ~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd-g~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 241 FSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD-GQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTT-SSEEEEEETTSCEEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCC-CCEEEEeecCceEEEEEEeec
Confidence 556778999999988765 599999998777766643 4567999999999 899999999999999998764
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=347.48 Aligned_cols=292 Identities=19% Similarity=0.167 Sum_probs=233.3
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEEC------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSK------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+|.+.|++++|||||++||+||. |++|++|+...............+|...|.+++|+|++. +++++.|+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg- 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSG- 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTS-
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCC-
Confidence 3579999999999999999999997 778999987633222233344556889999999999985 55677787
Q ss_pred eEEEEEECCCceEEEEe---cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCC
Q psy10566 371 HELWVWNIETELLRVKL---NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGK 444 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~ 444 (604)
+|++||+.+++..... ..+|...|++++|+|++++|++|+.|+.|++||++ ++.+..+.+| .|.+++|++++.
T Consensus 116 -~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 116 -AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp -CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS
T ss_pred -EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 8999999988654322 23688899999999999999999999999999995 6777777765 799999999875
Q ss_pred -EEEEEeCCCeEEEEEcCCCcccccc---cCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCceeeEeeccccceEE
Q psy10566 445 -SVLAADTHHRIRTYNFEHLTDSNLL---QEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 445 -~l~~~~~dg~I~i~d~~~~~~~~~~---~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
.+++++.|+.|++||+++.+..... .+...+.+++|+|++ .++++++.|+.|++||+++++.+..+.+|...+..
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 7889999999999999987655443 356779999999975 67889999999999999999999999998886554
Q ss_pred EEeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 520 IHSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 520 i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
+.++|++ ++|++|+.||+|+|||+++++++..+ +|.+.|++++|+|.++.+|+|||.||+|++|++....+.
T Consensus 275 ---l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 275 ---LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ---EEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred ---EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 4456765 68999999999999999999887665 799999999999944899999999999999999775443
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-42 Score=352.25 Aligned_cols=296 Identities=16% Similarity=0.263 Sum_probs=253.5
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+.++|.+|.+.|++++|+|+|++|+||+.||+|+|||+. +......+..|...|.+++|+|++++|++++.|+
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~----~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~- 130 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNAL----TSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS- 130 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETT----TTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS-
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECC----CCccceEEecCCCCEEEEEECCCCCEEEEeeCCC-
Confidence 45678999999999999999999999999999999999988 5566788899999999999999999999999998
Q ss_pred eEEEEEECCCceE------EEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcC-CCeeeee-----ece--eEE
Q psy10566 371 HELWVWNIETELL------RVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIE-GQVLDSW-----EGV--RVN 435 (604)
Q Consensus 371 ~~i~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~-~~~~~~~-----~~~--~v~ 435 (604)
.+++||+.+... ......+|...|.++.|+|+ +..|++|+.|++|++||+. ++.+..+ .+| .+.
T Consensus 131 -~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 131 -ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp -CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred -cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 899999875321 12233478889999999996 4579999999999999994 6666655 233 689
Q ss_pred EEEEcC-CCCEEEEEeCCCeEEEEEcCCC-cc-cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 436 CLWCRS-DGKSVLAADTHHRIRTYNFEHL-TD-SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 436 ~l~~s~-~g~~l~~~~~dg~I~i~d~~~~-~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
++.+++ +++.+++++.|+.|++||++.. .. .....|...|.+++|+|++.++++++.|++|++||++++..+..+..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 999977 8899999999999999999743 33 33445889999999999999999999999999999999998888765
Q ss_pred cccc----eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe----eCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 513 VTQG----QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL----SGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 513 ~~~~----~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l----~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
+... ...+.++.++|+|+++++|+.||.|++||..+++.+..+ .+|.+.|++++|+|+ +.+|+||+.||+|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~D~~i 368 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSD-GSALCTGSWDKNL 368 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSS-SSEEEEECTTSCE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCC-CCEEEEeeCCCCE
Confidence 4321 112445667899999999999999999999999888877 689999999999999 8999999999999
Q ss_pred EEECCCCCC
Q psy10566 585 RIWGPHLNT 593 (604)
Q Consensus 585 ~iW~~~~~~ 593 (604)
+||++...+
T Consensus 369 ~iW~~~~~~ 377 (380)
T 3iz6_a 369 KIWAFSGHR 377 (380)
T ss_dssp EEEECCSSS
T ss_pred EEEecCCCc
Confidence 999998764
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=338.01 Aligned_cols=295 Identities=19% Similarity=0.274 Sum_probs=246.3
Q ss_pred CccceeecccCCCcEEEEEE-----cC-CCCeEEEEECCCeEEEEEeCCCC---ceeEeeEEeccCCCCeeEEEECCCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKF-----SP-DGLKLATGSKDTTVIIWDVDPVT---FTCQHRKTLEGHTLGVAYLAWSPDSS 360 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~f-----sp-dg~~lasgs~dg~i~iwd~~~~~---~~~~~~~~l~~h~~~V~~l~~spd~~ 360 (604)
......+|.+|.+.|++++| ++ ++++||||+.|++|+|||+.... ........+.+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 34567789999999999999 77 99999999999999999997322 12456778899999999999999999
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ce--eEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GV--RVN 435 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~--~v~ 435 (604)
++++++.|+ +|++||+.+++....+. +|...|.+++|+|+++++++++.|+.|++||+.+....... ++ .+.
T Consensus 90 ~l~s~s~D~--~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 90 FAISSSWDK--TLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEEEEETTS--EEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred EEEEEcCCC--cEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 999999998 89999999999887776 68899999999999999999999999999999766544433 23 699
Q ss_pred EEEEcCCC----------CEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC-C
Q psy10566 436 CLWCRSDG----------KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD-R 504 (604)
Q Consensus 436 ~l~~s~~g----------~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-~ 504 (604)
+++|+|++ .++++++.|+.|++||...........|...|.+++|+|++++|++++.|+.|++||+.+ .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999987 789999999999999965444444556888999999999999999999999999999954 4
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE--Eee-----------CCCCCeeEEEEcCCC
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA--TLS-----------GHTRTVSCVAWNPVY 571 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~--~l~-----------~h~~~V~~v~~sp~~ 571 (604)
.....+. +.. .+..+.++|++.++++| .|+.|++||+.+++... .+. +|...|++++|+|+
T Consensus 247 ~~~~~~~-~~~---~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~- 320 (343)
T 2xzm_R 247 YPQREFD-AGS---TINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL- 320 (343)
T ss_dssp SCSEEEE-CSS---CEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS-
T ss_pred ccceeec-CCC---cEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC-
Confidence 3444443 222 25556678999887755 57789999998876544 443 68889999999999
Q ss_pred CcEEEEEeCCCcEEEECCCCCC
Q psy10566 572 HQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|++|+.||+|++|++.++.
T Consensus 321 g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp SCCEEEEETTSEEEEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEEccC
Confidence 7899999999999999987643
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=339.27 Aligned_cols=292 Identities=16% Similarity=0.168 Sum_probs=234.0
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCC-------CCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP-------VTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~-------~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.|...|.+++|+|||++|++++ |+++++||... .............|..+|.+++|+|++ .|++++.|+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg-- 103 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG-- 103 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS--
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC--
Confidence 4677899999999999999887 77888887420 000000111222356789999999985 688999998
Q ss_pred EEEEEECCCceEEEE---ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCC-
Q psy10566 372 ELWVWNIETELLRVK---LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGK- 444 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~- 444 (604)
+|++||+.+++.... ...+|...|++++|+|++++|++|+.|++|++||+ +++.+..+.+| .|.+++|++++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 899999998864332 23478899999999999999999999999999999 57778888876 799999999985
Q ss_pred EEEEEeCCCeEEEEEcCCCccccccc---CCCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQ---EDHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~---~~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
.+++++.|++|++||+++.+....+. +...+.+++|+|+ +.++++|+.|+.|++||+++++++..+.+|...+..
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~- 262 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG- 262 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE-
T ss_pred ceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE-
Confidence 68899999999999999887655443 4567899999985 567889999999999999999999999999886544
Q ss_pred EeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCCCcc
Q psy10566 521 HSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598 (604)
Q Consensus 521 ~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~~~~ 598 (604)
+.++|++ ++|++|+.||+|+|||+.+++++ .+.+|.+.|++++|+|++..+|+|||.||+|++|++.+...+.|.
T Consensus 263 --v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~~p~ 338 (344)
T 4gqb_B 263 --LVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPAPG 338 (344)
T ss_dssp --EEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-------
T ss_pred --EEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCCCCC
Confidence 4556887 68999999999999999998754 578999999999999996678999999999999999887654443
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-40 Score=339.06 Aligned_cols=282 Identities=25% Similarity=0.343 Sum_probs=239.7
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC------------------CCeeEEEECCCCC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT------------------LGVAYLAWSPDSS 360 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~------------------~~V~~l~~spd~~ 360 (604)
+|.+.|++++|+|||++||+|+ +++++||++. .+.....+..|. ..|.+++|+|+++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~----~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVS----DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETT----TCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEec----CCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 6999999999999999999986 7899999998 334444554442 2499999999999
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec-eeEEEEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG-VRVNCLW 438 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~v~~l~ 438 (604)
+|++++.|+ .|++||+.+++....+. +|...|.+++|+|++.+|++++.|++|++||+. ++....+.. ..+.+++
T Consensus 137 ~l~s~~~d~--~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 213 (393)
T 1erj_A 137 FLATGAEDR--LIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 213 (393)
T ss_dssp EEEEEETTS--CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred EEEEEcCCC--eEEEEECCCCcEEEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEE
Confidence 999999998 89999999998887776 788899999999999999999999999999995 555544443 3689999
Q ss_pred EcC-CCCEEEEEeCCCeEEEEEcCCCccccc--------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-----
Q psy10566 439 CRS-DGKSVLAADTHHRIRTYNFEHLTDSNL--------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR----- 504 (604)
Q Consensus 439 ~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~----- 504 (604)
++| +++++++++.|+.|++||++++..... ..|...|.+++|+|+++++++++.|+.|++||+++.
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 999 899999999999999999988654433 346788999999999999999999999999999763
Q ss_pred -------ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcC------CC
Q psy10566 505 -------ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP------VY 571 (604)
Q Consensus 505 -------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp------~~ 571 (604)
.+...+.+|...+ .++.+++++.+|++|+.||.|++||..+++++..+.+|.+.|.+++|+| +
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~- 369 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFV---LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE- 369 (393)
T ss_dssp -------CEEEEEECCSSCE---EEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTT-
T ss_pred ccCCCCCcceEEEecccCcE---EEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCC-
Confidence 3445666777644 4455679999999999999999999999999999999999999999986 4
Q ss_pred CcEEEEEeCCCcEEEECCCCC
Q psy10566 572 HQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+.+|+||+.||+|+||++...
T Consensus 370 ~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 370 YNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CEEEEEEETTSEEEEEEEEEC
T ss_pred CCEEEEECCCCcEEECccccc
Confidence 689999999999999998654
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=327.19 Aligned_cols=290 Identities=17% Similarity=0.233 Sum_probs=228.5
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-cc-CCCCeeEEEECCCCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EG-HTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~-h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.++++.|.+|.+.|++++|+|+ +||+|+.|++|+|||+.. ........+ .+ |...|.+++|+|++++|++++.|
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~--~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKY--DDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSS--SCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecC--CCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 4567889999999999999998 999999999999999973 223444555 44 99999999999999999999999
Q ss_pred CceEEEEEECCC-------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-C----Ceeeeeece--eE
Q psy10566 369 DCHELWVWNIET-------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-G----QVLDSWEGV--RV 434 (604)
Q Consensus 369 ~~~~i~vwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~----~~~~~~~~~--~v 434 (604)
+ +|++||+.. ......+ .+|...|.+++|+|++++|++|+.|++|++||++ . +.+..+.+| .|
T Consensus 80 ~--~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 80 S--TVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp S--CEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred C--cEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 8 899999853 2334444 3788999999999999999999999999999993 2 345556655 69
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCC--cc-cccccCCCCeeEEEECCC--CCEEEEEecCCeEEEEecCCC-----
Q psy10566 435 NCLWCRSDGKSVLAADTHHRIRTYNFEHL--TD-SNLLQEDHPVMSFTIDAT--DRLALLNVSTQGVHLWDLRDR----- 504 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~dg~I~i~d~~~~--~~-~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~I~lwd~~~~----- 504 (604)
.+++|+|++..+++++.|++|++||.... .. ..+..|...|.+++|+|+ +..+++++.|++|++||+.++
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 99999999999999999999999998765 22 234457889999999998 678999999999999999764
Q ss_pred ---ceeeEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc--ceEE-eeCCCC-CeeEEEEcCC-CCcEE
Q psy10566 505 ---ILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL--PIAT-LSGHTR-TVSCVAWNPV-YHQMI 575 (604)
Q Consensus 505 ---~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~--~~~~-l~~h~~-~V~~v~~sp~-~~~~l 575 (604)
.....+.+ |...+.. +.++++ .+|++|+.||.|+|||..+++ .... +.+|.. .|++++|+|. ++.+|
T Consensus 237 ~~~~~~~~~~~~h~~~v~~---v~~s~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYN---VAWGFN-GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL 312 (330)
T ss_dssp EEEEEEEECCSCCSSCEEE---EEECTT-SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCE
T ss_pred ceeEEeeecccccccceEE---EEEcCC-CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEE
Confidence 33444444 5554444 444554 489999999999999998774 3333 467877 8999999993 27899
Q ss_pred EEEeCCCcEEEECCCC
Q psy10566 576 ASVSDDCTVRIWGPHL 591 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~ 591 (604)
+||+.||+|+||+++.
T Consensus 313 as~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 313 ATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEETTSEEEEEEC--
T ss_pred EEecCCCcEEEEEecc
Confidence 9999999999999865
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=354.69 Aligned_cols=291 Identities=19% Similarity=0.287 Sum_probs=245.6
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.....+.+|.+.|++++|+|++. .|++|+.|++|++||.. ..+....+.+|...|.+++|+|++++|++++.|+
T Consensus 138 ~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~----~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~- 212 (611)
T 1nr0_A 138 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP----PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDG- 212 (611)
T ss_dssp CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT----TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC----CCeEeeeeccccCceEEEEECCCCCEEEEEECCC-
Confidence 34567899999999999999987 59999999999999987 5567788999999999999999999999999999
Q ss_pred eEEEEEECCCceEEEEecC------CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeee---------------
Q psy10566 371 HELWVWNIETELLRVKLNH------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDS--------------- 428 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~--------------- 428 (604)
+|++||+.+++....+.. +|...|.+++|+|++++|++++.|++|++||+. ++.+..
T Consensus 213 -~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 213 -TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp -CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred -cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 899999999988877743 688999999999999999999999999999985 433322
Q ss_pred ----------------------------eece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc---------
Q psy10566 429 ----------------------------WEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--------- 469 (604)
Q Consensus 429 ----------------------------~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--------- 469 (604)
+.+| .|.+++|+|+|+++++++.|+.|++||+.++......
T Consensus 292 ~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~ 371 (611)
T 1nr0_A 292 WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 371 (611)
T ss_dssp ECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEE
T ss_pred EcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEE
Confidence 2233 5899999999999999999999999998764321110
Q ss_pred --------------------------------------------------------------------------cCCCCe
Q psy10566 470 --------------------------------------------------------------------------QEDHPV 475 (604)
Q Consensus 470 --------------------------------------------------------------------------~~~~~i 475 (604)
.+...+
T Consensus 372 ~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v 451 (611)
T 1nr0_A 372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNS 451 (611)
T ss_dssp EEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCE
T ss_pred EEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCc
Confidence 012346
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecCCCce--eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-Ccce
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLRDRIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPI 552 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~ 552 (604)
.+++|+|+++++++++.|++|++||+.++.. +.. .+|... +.++.++|+|++|++++.|++|++||+.+ ++++
T Consensus 452 ~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~---v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~ 527 (611)
T 1nr0_A 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAE---ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA 527 (611)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSC---EEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES
T ss_pred eEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCc---eEEEEECCCCCEEEEEcCCCCEEEEEcCCCCcee
Confidence 7899999999999999999999999987653 233 456653 55566789999999999999999999987 6655
Q ss_pred EE--eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 553 AT--LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 553 ~~--l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.. +.+|...|++++|+|+ +.+||||+.|++|++|++..+.
T Consensus 528 ~~~~~~~H~~~V~~v~fspd-g~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 528 HTNSWTFHTAKVACVSWSPD-NVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp CCCCCCCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCTT
T ss_pred eeeeeeecccceeEEEECCC-CCEEEEEECCCcEEEEECCCcc
Confidence 44 3459999999999999 8999999999999999998765
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=319.52 Aligned_cols=293 Identities=17% Similarity=0.255 Sum_probs=247.0
Q ss_pred cceeecccCCCcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCCC-ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVT-FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~~-~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
....+|+||.+.|++++|+|+ +++|||||.||+|+|||+.... ........+.+|...|.+++|+|++++|++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 455689999999999999998 6799999999999999997432 23456778899999999999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee--ec--eeEEEEEEcCCC--
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW--EG--VRVNCLWCRSDG-- 443 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~--~~v~~l~~s~~g-- 443 (604)
.|++|+........... .+...+..+.+++++..+++++.|+.+++||......... .+ ..+..+++++++
T Consensus 109 --~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 109 --TLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp --EEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred --cceEEeecccceeeeec-CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 89999999988777665 5667789999999999999999999999999965443332 22 368888888764
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
..+++++.|+.|++||+.+.+....+ .+..+|.+++|+|+++++++++.|+.|++||+++.+.+..+..+.. +..
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----v~~ 261 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI----INA 261 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC----EEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce----EEe
Confidence 56889999999999999987665444 4788999999999999999999999999999999999888876542 445
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee---------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS---------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~---------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.++|++.+ ++++.|+.|++||++++..+..+. +|...|++++|+|+ +.+|++|+.||+|+|||+++|+
T Consensus 262 ~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 262 LCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD-GQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECSSSSE-EEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT-SSEEEEEETTSCEEEEEEEC--
T ss_pred eecCCCCce-eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEeCCCcC
Confidence 566677755 556679999999999887766553 68889999999999 8999999999999999999875
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=346.99 Aligned_cols=284 Identities=26% Similarity=0.400 Sum_probs=255.5
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
..+....+.+|.+.|++++|+|++++|++++.|++|++||.. ......+.+|...|.+++|+|+++++++++.++
T Consensus 292 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-----~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 366 (577)
T 2ymu_A 292 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-----GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDK 366 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-----CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 346678889999999999999999999999999999999986 234567888999999999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
.|++||. +++....+. .|...|.+++|+|++++|++++.|+.|++||.+++.+..+.++ .|.+++|+|+++.++
T Consensus 367 --~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 367 --TVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp --EEEEEET-TCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred --EEEEEcC-CCCEEEEec-CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 8999996 455555554 6788999999999999999999999999999999988888776 699999999999999
Q ss_pred EEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+++.|+.|++||...........+...|.+++|+|+++++++++.|+.|++||. +++.++.+.+|...+. .+.++|
T Consensus 443 ~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~---~l~~s~ 518 (577)
T 2ymu_A 443 SASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR---GVAFSP 518 (577)
T ss_dssp EEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE---EEEECT
T ss_pred EEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEE---EEEEcC
Confidence 999999999999876655666678899999999999999999999999999995 6788899999988544 455679
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
++++|++++.||.|++||. +++++.++.+|.+.|++++|+|+ +.+|+|++.||+|++||
T Consensus 519 dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~d-g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD-GQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEeC
Confidence 9999999999999999995 68899999999999999999999 78999999999999997
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=348.80 Aligned_cols=294 Identities=14% Similarity=0.199 Sum_probs=250.2
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED- 369 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~- 369 (604)
......+.+|.+.|++++|+|||++||+|+.||+|+|||+. .........+.+|..+|.+++|+|+++.|++++.+.
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~--~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT--QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESS--STTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECC--CCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC
Confidence 34667899999999999999999999999999999999986 223344567889999999999999999999988753
Q ss_pred -ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCC
Q psy10566 370 -CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGK 444 (604)
Q Consensus 370 -~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~ 444 (604)
.+.|++||. +.....+ .+|...|.+++|+|++. .|++|+.|++|++||.. ++....+.+| .|.+++|+|+|+
T Consensus 127 ~~~~v~~wd~--~~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 127 RFGHVFLFDT--GTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp CSEEEEETTT--CCBCBCC-CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred ceeEEEEeeC--CCCccee-cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC
Confidence 247888884 4444444 37889999999999987 59999999999999984 5666777776 699999999999
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccc--------cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLL--------QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~--------~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~ 516 (604)
.+++++.|++|++||..+++....+ .|...|.+++|+|++++|++++.|++|++||+.+++.+.++..+...
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 9999999999999999877654443 57889999999999999999999999999999999988887643221
Q ss_pred e-EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 517 Q-FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 517 ~-~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
. ..+...+ ++..+++++.||.|++||..++++...+.+|...|++++|+|+ +.+|++++.||+|++||+.++.
T Consensus 284 ~~~~~~~~~---~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd-g~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 284 EDQQLGIIW---TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD-GKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp GGCEEEEEE---CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred cceeEEEEE---cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCCCc
Confidence 1 1222222 5788999999999999999999988899999999999999999 8999999999999999998764
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=327.40 Aligned_cols=292 Identities=11% Similarity=0.117 Sum_probs=245.7
Q ss_pred ccceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d 368 (604)
.+....+.+|.+.|++++|+|++ ++||+|+.||.|+|||+. +..........+|...|.+++|+| ++.+|++++.|
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYD--VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETT--STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCC--CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 34566889999999999999999 899999999999999998 333333444457999999999999 77999999999
Q ss_pred CceEEEEEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCC
Q psy10566 369 DCHELWVWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGK 444 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~ 444 (604)
+ .|++||+.+... ..+. ..+...|.+++|+|++++|++|+.|+.|++||++++.+..+.++ .|.+++|+|+++
T Consensus 141 ~--~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 141 G--ATTLRDFSGSVI-QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp T--EEEEEETTSCEE-EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCT
T ss_pred C--EEEEEECCCCce-EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCC
Confidence 8 899999997443 3333 23457799999999999999999999999999998888888776 799999999999
Q ss_pred -EEEEEeCCCeEEEEEcCC----CcccccccCCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCCceeeEeeccccce-
Q psy10566 445 -SVLAADTHHRIRTYNFEH----LTDSNLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ- 517 (604)
Q Consensus 445 -~l~~~~~dg~I~i~d~~~----~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~- 517 (604)
.+++++.|+.|++||+++ ........+...+.+++|+| ++.++++++.|+.|++||+++++....+.+|....
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 899999999999999998 44455557889999999999 99999999999999999999998887777554211
Q ss_pred ---E----------EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--CCCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 518 ---F----------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG--HTRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 518 ---~----------~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--h~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
. .+..+.++|++++ +|+.||.|++||+.+++++..+.+ |...+.+++|+|+ +.+|++|+ ||
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~-g~~l~s~s-d~ 373 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT-GDVLASGM-GF 373 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTT-SSEEEEEE-TT
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecC-ccEEEEec-CC
Confidence 0 1122344567766 778999999999999999999987 4677888899999 88999997 99
Q ss_pred cEEEECCCC
Q psy10566 583 TVRIWGPHL 591 (604)
Q Consensus 583 ~I~iW~~~~ 591 (604)
.|++|++++
T Consensus 374 ~i~iw~~~~ 382 (383)
T 3ei3_B 374 NILIWNRED 382 (383)
T ss_dssp EEEEEECC-
T ss_pred cEEEEecCC
Confidence 999999875
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=318.13 Aligned_cols=288 Identities=15% Similarity=0.189 Sum_probs=253.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.....|.+|.+.|++++|+|+|++|++|+.||.|+|||+. .......+.+|...|.+++|+|++++|++++.|+
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-- 96 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL----NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY-- 96 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT--
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCC----CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC--
Confidence 3445689999999999999999999999999999999998 5567788999999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCC-C-----------eeeeeece--
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-----GQFYQCDIEG-Q-----------VLDSWEGV-- 432 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~-~-----------~~~~~~~~-- 432 (604)
.|++||+.+++....+. +...|.+++|+|+++++++++.+ +.|.+||+.. . ....+..+
T Consensus 97 ~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred eEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 89999999999888877 67889999999999999999999 9999999842 1 12222222
Q ss_pred --eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC-Ccccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee
Q psy10566 433 --RVNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 433 --~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~-~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
.+.+++|+|+++.+++++.+|.|++||+.+ ..... ...+...|.+++|+|++.++++++.|+.|++||+++++.+.
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 799999999999999999999999999998 44433 33478899999999999999999999999999999999888
Q ss_pred EeeccccceEEEEeeeCCCCCcEEEEEeCCC--------------cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 509 KFQGVTQGQFTIHSCFGGANQDFVASGSEDG--------------KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 509 ~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg--------------~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
.+.. .. .+..+.++|+++++++++.++ .+++||..+++++..+.+|...|++++|+|+ +.+
T Consensus 255 ~~~~-~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~ 329 (369)
T 3zwl_B 255 KYET-DC---PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ-GTS 329 (369)
T ss_dssp EEEC-SS---CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT-SSE
T ss_pred eecC-CC---CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC-CCE
Confidence 8873 33 244456679999999999988 8999999999999999999999999999999 899
Q ss_pred EEEEeCCCcEEEECCCCC
Q psy10566 575 IASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~ 592 (604)
|++++.||.|++|+++.+
T Consensus 330 l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 330 YASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEETTSEEEEEEECHH
T ss_pred EEEEcCCCeEEEEECccc
Confidence 999999999999999764
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=330.89 Aligned_cols=295 Identities=13% Similarity=0.156 Sum_probs=237.6
Q ss_pred ceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCc
Q psy10566 293 TTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDC 370 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~ 370 (604)
......+|...|+|++|+| ++.+||+|+.||+|+|||+. .........+.+|.+.|++|+|+| ++.+|++++.|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~--~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~- 187 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFG--IKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG- 187 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSS--CCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECC--CCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-
Confidence 3456678999999999999 56799999999999999998 333445566788999999999998 688999999998
Q ss_pred eEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCC-EE
Q psy10566 371 HELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGK-SV 446 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~-~l 446 (604)
+|++||++++....... ..+...+.+++|+|++.+|++|+.||.|++||++++.+..+.+| .|.+++|+|++. .+
T Consensus 188 -~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 188 -TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp -CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred -EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEE
Confidence 89999998776544333 23445678999999999999999999999999998888777776 799999999876 67
Q ss_pred EEEeCCCeEEEEEcCCCcccc----cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc----eE
Q psy10566 447 LAADTHHRIRTYNFEHLTDSN----LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG----QF 518 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~----~~ 518 (604)
++++.|+.|++||+++..... ...|..+|.+++|+|++.+|++++.|+.|++||+.++.....+..|... ..
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 346 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLT 346 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSC
T ss_pred EEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccce
Confidence 789999999999998765432 2357889999999999999999999999999999998887777655432 11
Q ss_pred EEEeeeCCCCCcEEEEEe------------CCCcEEEEeCCCCcceEEee-CCCCCeeEE-EEcCCCCcEEEEEeCCCcE
Q psy10566 519 TIHSCFGGANQDFVASGS------------EDGKVYIWHVKRELPIATLS-GHTRTVSCV-AWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs------------~dg~I~iwd~~~~~~~~~l~-~h~~~V~~v-~~sp~~~~~l~s~s~Dg~I 584 (604)
.+. +.+++++.++++++ .++.|++||..+++.+..+. +|...|.++ +|+|+ +.+|++|+ |++|
T Consensus 347 ~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspd-g~~lasg~-d~~i 423 (435)
T 4e54_B 347 PIK-AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPM-GDTLASAM-GYHI 423 (435)
T ss_dssp CCB-CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTT-SSCEEEEC-SSEE
T ss_pred eEE-EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCC-CCEEEEEc-CCcE
Confidence 222 22346666666654 34679999999999988875 678889887 69999 78898876 7899
Q ss_pred EEECCCCCCC
Q psy10566 585 RIWGPHLNTN 594 (604)
Q Consensus 585 ~iW~~~~~~~ 594 (604)
+||++++++.
T Consensus 424 ~iW~~~~gk~ 433 (435)
T 4e54_B 424 LIWSQQEART 433 (435)
T ss_dssp EECCCC----
T ss_pred EEEECCcCee
Confidence 9999998764
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=324.72 Aligned_cols=291 Identities=14% Similarity=0.130 Sum_probs=250.0
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC--ceeEeeEEeccCCCCeeEEEECCC----C---CeE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT--FTCQHRKTLEGHTLGVAYLAWSPD----S---SHL 362 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~--~~~~~~~~l~~h~~~V~~l~~spd----~---~~l 362 (604)
...+.+.+|.+.|++++|+| ++|++|+.||+|+||++.... ........+.+|..+|.+++|+|+ + ++|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 45678899999999999999 799999999999999998322 002256778899999999999999 9 999
Q ss_pred EEEeCCCceEEEEEECCCceE-----EEEecCCC-----CCCeEEEEEe----cCCCE-EEEEecCCeEEEEEcCC----
Q psy10566 363 LVVGPEDCHELWVWNIETELL-----RVKLNHSP-----EDSLTSCSWN----RDGTK-FVCGGIRGQFYQCDIEG---- 423 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~-----~~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~iwd~~~---- 423 (604)
++++.|+ .|++||+.++.. ...+. .| ...|.+++|+ |+++. |++++.||.|++||+..
T Consensus 85 ~s~~~dg--~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 85 ATTSFSG--DLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEETTS--CEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEcCCC--CEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 9999998 899999998875 55555 45 4889999999 99999 99999999999999954
Q ss_pred ---Ceee-----eee---------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc----C---CCCeeEEE
Q psy10566 424 ---QVLD-----SWE---------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ----E---DHPVMSFT 479 (604)
Q Consensus 424 ---~~~~-----~~~---------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~----~---~~~i~~~~ 479 (604)
+.+. .+. ...+.+++|+|++ .+++++.|+.|++||+++......+. + ...+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 4544 553 3369999999999 99999999999999999876665554 4 88999999
Q ss_pred ECCCCCEEEEEecC---CeEEEEecCCCceeeEeec-------------cccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 480 IDATDRLALLNVST---QGVHLWDLRDRILLRKFQG-------------VTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 480 ~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
|+|++.++++++.| +.|++||+++++.+..+.+ |... +..+.++|++++|++|+.||.|++
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW---VMSLSFNDSGETLCSAGWDGKLRF 317 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC---EEEEEECSSSSEEEEEETTSEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc---EEEEEECCCCCEEEEEeCCCeEEE
Confidence 99999999999999 9999999999999999988 7664 444556799999999999999999
Q ss_pred EeCCCCcceEEee------CC---------------CCCeeEEEEcCCCC----------cEEEEEeCCCcEEEECCCCC
Q psy10566 544 WHVKRELPIATLS------GH---------------TRTVSCVAWNPVYH----------QMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 544 wd~~~~~~~~~l~------~h---------------~~~V~~v~~sp~~~----------~~l~s~s~Dg~I~iW~~~~~ 592 (604)
||+.+++++..+. +| ...|++++|+|+ + .+|++++.||.|++|+++++
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~-g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK-GWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT-TTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc-cccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999999999999 88 999999999999 5 79999999999999999875
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=341.96 Aligned_cols=291 Identities=16% Similarity=0.266 Sum_probs=246.6
Q ss_pred cceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCc-eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTF-TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~-~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.....+++|.+.|++++|+|++ ++|+|||.|++|+||++..... .......+.+|...|.+++|+|++++|++++.|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 3445789999999999999875 6999999999999999974322 2345678899999999999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee----ce--eEEEEEEcCCC
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE----GV--RVNCLWCRSDG 443 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~--~v~~l~~s~~g 443 (604)
+|++||+.++.....+. +|...|.+++|+|++++|++|+.|++|++||..+....... +| .|.+++|+|++
T Consensus 453 --~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 453 --ELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp --EEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred --cEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 89999999999888776 78899999999999999999999999999999765544432 23 59999999987
Q ss_pred --CEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 444 --KSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 444 --~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
..+++++.|+.|++||+++......+ .|...|.+++|+|+++++++++.|+.|++||+++++.+..+..+. .+
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~----~v 605 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS----VI 605 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS----CE
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC----cE
Confidence 57999999999999999987655444 578899999999999999999999999999999998887776543 35
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC-------------------CCeeEEEEcCCCCcEEEEEeCC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT-------------------RTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-------------------~~V~~v~~sp~~~~~l~s~s~D 581 (604)
.++.++|++.++++++ ++.|+|||+.+++.+..+..+. ..+++++|+|+ +.+|+||+.|
T Consensus 606 ~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd-g~~l~sgs~D 683 (694)
T 3dm0_A 606 HALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD-GSTLFSGYTD 683 (694)
T ss_dssp EEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTT-SSEEEEEETT
T ss_pred EEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCC-CCEEEEEcCC
Confidence 5566779998887775 5569999999998888775432 13789999999 8999999999
Q ss_pred CcEEEECCCC
Q psy10566 582 CTVRIWGPHL 591 (604)
Q Consensus 582 g~I~iW~~~~ 591 (604)
|+|+||++..
T Consensus 684 g~i~iW~i~~ 693 (694)
T 3dm0_A 684 GVIRVWGIGR 693 (694)
T ss_dssp SEEEEEEC--
T ss_pred CeEEEEeccC
Confidence 9999999853
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-37 Score=331.60 Aligned_cols=285 Identities=26% Similarity=0.399 Sum_probs=255.1
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+.+..+.+|...|.+++|+|++++|++++.|+.|++|+.. ......+.+|...|.+++|+|+++.+++++.|+
T Consensus 252 ~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~- 325 (577)
T 2ymu_A 252 GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-----GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDK- 325 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-----CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCC-
Confidence 46678899999999999999999999999999999999975 345677889999999999999999999999998
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLA 448 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~ 448 (604)
.|++||...... ..+. .|...|.+++|+|+++.+++++.|+.|++||.+++.+..+.++ .|.+++|+|+++++++
T Consensus 326 -~i~~w~~~~~~~-~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 402 (577)
T 2ymu_A 326 -TVKLWNRNGQHL-QTLT-GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIAS 402 (577)
T ss_dssp -CEEEEETTSCEE-EEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred -eEEEEeCCCCee-EEEe-CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 899999876554 3343 6788999999999999999999999999999999988888776 6999999999999999
Q ss_pred EeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCC
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
++.|+.|++||...........+...|.+++|+|+++++++++.|+.|++||. +++.+..+.+|...+ .++.++|+
T Consensus 403 ~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v---~~~~~spd 478 (577)
T 2ymu_A 403 ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV---RGVAFSPD 478 (577)
T ss_dssp EETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCE---EEEEECTT
T ss_pred EeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCE---EEEEEcCC
Confidence 99999999999766555556668899999999999999999999999999996 567788888888754 44566899
Q ss_pred CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 529 ~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+++|++++.|+.|++||. +++++..+.+|...|++++|+|+ +.+|++++.||.|++||..
T Consensus 479 ~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp SCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT-SSCEEEEETTSEEEEECTT
T ss_pred CCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEEEEEeCC
Confidence 999999999999999995 68889999999999999999999 8899999999999999964
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=304.85 Aligned_cols=287 Identities=16% Similarity=0.112 Sum_probs=247.5
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.+..+.+.+|.+.|++++| |++.+|++|+.||.|++||+. .......+..|...|.+++|+|+++++++++.++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD----DQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEES----SSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC----CCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 34678899999999999999 999999999999999999998 5566777888999999999999999999999998
Q ss_pred ceEEEEEECCCc---eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcC-CC
Q psy10566 370 CHELWVWNIETE---LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRS-DG 443 (604)
Q Consensus 370 ~~~i~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~-~g 443 (604)
.|++|++... .....+ ..|...|.+++| +++.+++++.||.|++|| .++....+..+ .+.++.+.+ ++
T Consensus 82 --~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 82 --MINGVPLFATSGEDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp --CEEEEETTCCTTSCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTT
T ss_pred --eEEEEEeeecCCCCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCC
Confidence 8999998764 334444 368889999999 578999999999999999 66666666554 688999888 99
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
+.+++++.|+.|++||...........+...+.+++++|++. +++++.|+.|++||+++++.+..+.+|...+. .+
T Consensus 156 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~---~~ 231 (313)
T 3odt_A 156 NKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY---CI 231 (313)
T ss_dssp TEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEE---EE
T ss_pred CEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEE---EE
Confidence 999999999999999954433333333788999999999998 99999999999999999999999998887544 44
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
.++|++ .+++|+.||.|++||+.+++++..+..|...|.+++|+|+ +. +++++.||.|++|++.+++.
T Consensus 232 ~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN-GD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT-SC-EEEEETTSCEEEEESCGGGC
T ss_pred EEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC-CC-EEEEeCCCcEEEEeCCCCce
Confidence 556888 5889999999999999999999999999999999999999 55 66799999999999987653
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=303.28 Aligned_cols=251 Identities=17% Similarity=0.272 Sum_probs=220.7
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
....++.+|.+.|.+++|+|++++|++++.|+ +|++||+.++.....+. .|..+|.+++|+|+++++++|+.|+.|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg--~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSG--RVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTS--EEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCC--cEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 34577889999999999999999999999998 89999999999888776 6778899999999999999999999999
Q ss_pred EEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECC-CCCEEEEEe
Q psy10566 418 QCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDA-TDRLALLNV 491 (604)
Q Consensus 418 iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~-~~~~l~~~~ 491 (604)
+||+ +++.+..+.+| .|.+++|+|+++++++++.|++|++||+++... .....|...|.+++|+| ++..+++++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9999 57888888777 699999999999999999999999999987632 23445788999999999 678999999
Q ss_pred cCCeEEEEecCCCceeeEeecc-ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 492 STQGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 492 ~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.|++|++||++++.....+..+ ...+..+.. ...+++.+|++|+.||+|++||+++++++.++.+|...|.+++|+|+
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~ 239 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDY-YPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEE-CCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEE-EEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCC
Confidence 9999999999988777666543 344444332 22358889999999999999999999999999999999999999999
Q ss_pred CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|+||+.||+|++||+.+++
T Consensus 240 -~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 240 -LPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp -SSEEEEEETTSCEEEEETTTCC
T ss_pred -CCEEEEEcCCCeEEEEECCCCc
Confidence 7899999999999999998865
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=312.21 Aligned_cols=290 Identities=15% Similarity=0.148 Sum_probs=242.7
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.+..|.++|++++|+|++++||+|+.|+.|+|||+. .........+.+|...|.+++|+|++++|++++.|+ .|++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg--~i~v 78 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--GNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR--NAYV 78 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEE--TTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS--CEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC--CCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC--eEEE
Confidence 345699999999999999999999999999999998 333447888899999999999999999999999998 8999
Q ss_pred EECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe----eeee-ec--eeEEEEEEcCCCCEEE
Q psy10566 376 WNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV----LDSW-EG--VRVNCLWCRSDGKSVL 447 (604)
Q Consensus 376 wd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~-~~--~~v~~l~~s~~g~~l~ 447 (604)
||+.+++...... ..|...|.+++|+|+++++++++.|+.|++||++... .... .. ..+.+++|+|+++.++
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 9999887554432 4678899999999999999999999999999995322 2333 22 3799999999999999
Q ss_pred EEeCCCeEEEEEcC------------------CCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee
Q psy10566 448 AADTHHRIRTYNFE------------------HLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 448 ~~~~dg~I~i~d~~------------------~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
+++.|+.|++||+. .......+ .+...+.+++|+|++.++++++.|+.|++||+++++.+.
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 99999999999964 23333323 567889999999999999999999999999999999999
Q ss_pred EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC--Cc--------------------------------ce--
Q psy10566 509 KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR--EL--------------------------------PI-- 552 (604)
Q Consensus 509 ~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~--~~--------------------------------~~-- 552 (604)
.+..|...+. .+.++|++.++++| .||.|++|++.+ ++ ..
T Consensus 239 ~~~~~~~~v~---~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (372)
T 1k8k_C 239 TLASETLPLL---AVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGS 314 (372)
T ss_dssp EEECSSCCEE---EEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-----
T ss_pred EEccCCCCeE---EEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccC
Confidence 9998876544 44556899988888 999999999987 42 00
Q ss_pred ----EEe-eCCCCCeeEEEEcCCCC---cEEEEEeCCCcEEEECCCCCC
Q psy10566 553 ----ATL-SGHTRTVSCVAWNPVYH---QMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 553 ----~~l-~~h~~~V~~v~~sp~~~---~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..+ .+|.+.|++++|++.++ .+|+||+.||.|++|++.+++
T Consensus 315 ~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 315 AAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp ----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 223 48999999999875536 899999999999999987643
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=313.27 Aligned_cols=294 Identities=13% Similarity=0.180 Sum_probs=240.6
Q ss_pred CccceeecccCCCcEEEEEEcCCCCe-EEEEEC---CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC---CCeE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLK-LATGSK---DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD---SSHL 362 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~-lasgs~---dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd---~~~l 362 (604)
|....+.+.+|.+.|++++|+|++.. +++|+. ||.|+|||+. +....... ..+|...|.+++|+|+ +.+|
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~--~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQ--HGDLKLLR-EIEKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEEC--SSSEEEEE-EEEESSCEEEEECTTCCTTTCCE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCC--CCccccee-eecccCcEEEEEEcCCCCCCceE
Confidence 33445667899999999999999964 456665 9999999998 22322222 2368999999999999 6999
Q ss_pred EEEeCCCceEEEEEECCCce-EEEEecCCCCCCeEEEEE------ecCCCEEEEEecCCeEEEEEcCC-C-eeeeeece-
Q psy10566 363 LVVGPEDCHELWVWNIETEL-LRVKLNHSPEDSLTSCSW------NRDGTKFVCGGIRGQFYQCDIEG-Q-VLDSWEGV- 432 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~------~~~~~~l~s~~~dg~i~iwd~~~-~-~~~~~~~~- 432 (604)
++++.|+ .|++||+.++. ....+. .|...|.+++| +|+++.|++++.||.|++||+.. . .+..+..+
T Consensus 84 ~~~~~dg--~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 84 ATGDFGG--NLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp EEEETTS--CEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred EEecCCC--eEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 9999998 89999999887 555555 78889999954 67999999999999999999953 3 45555321
Q ss_pred -----eEEEEE----EcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC---CCCEEEEEecCCeEEEEe
Q psy10566 433 -----RVNCLW----CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA---TDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 433 -----~v~~l~----~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~I~lwd 500 (604)
.+.+++ |+++++.+++++.|+.|++||+++........+...+.+++|+| ++.++++++.||.|++||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 577887 78999999999999999999999988777777889999999999 999999999999999999
Q ss_pred cCCCceeeEee-----ccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCC-------------------cceEEe
Q psy10566 501 LRDRILLRKFQ-----GVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRE-------------------LPIATL 555 (604)
Q Consensus 501 ~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~-------------------~~~~~l 555 (604)
+++++....+. +|...+. .+.++|++. ++++|+.||.|++||+.++ +++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 241 MRTQHPTKGFASVSEKAHKSTVW---QVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEETTTEEEEEEEECCSSCEE---EEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred CcCCCcccceeeeccCCCcCCEE---EEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 99887776665 6766444 455568888 8999999999999999854 457788
Q ss_pred eCCCCCeeEEEEcCCCCcEEE-EEeCCCcEEEECCCCCC
Q psy10566 556 SGHTRTVSCVAWNPVYHQMIA-SVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 556 ~~h~~~V~~v~~sp~~~~~l~-s~s~Dg~I~iW~~~~~~ 593 (604)
.+|...|++++|+|+ +.+|+ +++.||.|++|++.+..
T Consensus 318 ~~~~~~v~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 318 TLSTQPISSLDWSPD-KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp ECCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECC--
T ss_pred ccCCCCeeEEEEcCC-CCeEEEEecCCCcEEEEECCCcc
Confidence 899999999999999 55565 89999999999998653
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=304.05 Aligned_cols=282 Identities=13% Similarity=0.185 Sum_probs=243.2
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec--cCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE--GHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~--~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
..+|.+.|++++|+|++++|++++ ||.|++||+..... ......+. +|...|.+++|+|+++++++++.++ .|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~ 122 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN-KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS--TLS 122 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC-CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS--EEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc-eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC--cEE
Confidence 347999999999999999999998 99999999974321 11223333 7899999999999999999999998 899
Q ss_pred EEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEE
Q psy10566 375 VWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 375 vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~ 449 (604)
+||+.+++ ....+. .|...|.+++|+|+++++++++.||.|++||+. ++.+..+..+ .+.+++++|+++.++++
T Consensus 123 ~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE
Confidence 99999887 333343 577889999999999999999999999999995 5666666654 79999999999999999
Q ss_pred eCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 450 DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
+.|+.|++||+++.+......+...+.+++|+|+++++++++.++.|++||+++++.. .+..|... +..+.++|++
T Consensus 202 ~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~---v~~~~~~~~~ 277 (337)
T 1gxr_A 202 GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESC---VLSLKFAYCG 277 (337)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSC---EEEEEECTTS
T ss_pred ecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccc---eeEEEECCCC
Confidence 9999999999999887777788899999999999999999999999999999988654 45566664 4445567999
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+++++++.||.|++||+.+++.+... .|...|.+++|+|+ +.+|++++.||.|++|++
T Consensus 278 ~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVD-DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTT-SCEEEEEETTSCEEEEEE
T ss_pred CEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCC-CCEEEEecCCCeEEEEEE
Confidence 99999999999999999999887554 48889999999999 889999999999999986
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=311.75 Aligned_cols=283 Identities=16% Similarity=0.217 Sum_probs=234.5
Q ss_pred ecccCCCcEEEEEEcCC----CCeEEEEECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCC----CCeE
Q psy10566 296 VLNDHCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPD----SSHL 362 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspd----g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd----~~~l 362 (604)
...+|.+.|++++|+|+ ...+++++.++.|+|||+.. ...+..+. .|...|.+++|+|+ +.+|
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS----QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG----GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC----CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Confidence 45589999999999984 34566666677999999982 22223333 26688999999999 6689
Q ss_pred EEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeee---ece--eEE
Q psy10566 363 LVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSW---EGV--RVN 435 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~---~~~--~v~ 435 (604)
++++.|+ .|++||+.+++.+..+. .|...|.+++|+| ++.+|++++.||.|++||+. ++.+..+ .++ .|.
T Consensus 89 ~~~~~dg--~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 89 AVAGSRG--IIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 165 (366)
T ss_dssp EEEETTC--EEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEE
T ss_pred EEecCCC--EEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCcee
Confidence 9999998 89999999999888776 6889999999999 99999999999999999995 5666665 333 799
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-----------------------------CCCCeeEEEECCCCCE
Q psy10566 436 CLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-----------------------------EDHPVMSFTIDATDRL 486 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-----------------------------~~~~i~~~~~s~~~~~ 486 (604)
+++|+|+++.+++++.|+.|++||+++......+. +...|.+++|+ +++
T Consensus 166 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 166 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred EEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 99999999999999999999999998765433222 77889999998 779
Q ss_pred EEEEecCCeEEEEecCCCce--------------eeEeeccccceEEEEeeeCCCC--CcEEEEEeCCCcEEEEeCCCCc
Q psy10566 487 ALLNVSTQGVHLWDLRDRIL--------------LRKFQGVTQGQFTIHSCFGGAN--QDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 487 l~~~~~dg~I~lwd~~~~~~--------------~~~~~~~~~~~~~i~~~~~~~~--~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
+++++.|+.|++||+.++.. +..+.+|... +..+.++|+ +++|++|+.||.|++||+.+++
T Consensus 244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD---IWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC---SSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc---EEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 99999999999999988644 5566666654 334556677 9999999999999999999886
Q ss_pred ce----EEeeCC--CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 551 PI----ATLSGH--TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 551 ~~----~~l~~h--~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+. ..+.+| ...|++++|+|+ +.+|++++.||.|++||+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 321 PHKAKCTTLTHHKCGAAIRQTSFSRD-SSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp GGGCEEEEECCTTCCSCEEEEEECTT-SSEEEEEETTSEEEEEEC--
T ss_pred CccccceEEcccccCCceEEEEeCCC-CCeEEEEeCCCEEEEEEecC
Confidence 54 477887 799999999999 89999999999999999853
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-36 Score=310.07 Aligned_cols=278 Identities=18% Similarity=0.240 Sum_probs=243.8
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
+|.+.|++++|+|++++|++|+.||.|++||. .......+.+|...|.+++|+|++++|++++.++ .|++||+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~ 178 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-----TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN--VTILWNV 178 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEET-----TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTC--CEEEEET
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-----CCCeeeeccCCCccEEEEEECCCCCEEEEEecCC--eEEEEEC
Confidence 37889999999999999999999999999994 3456778889999999999999999999999998 8999999
Q ss_pred CCceEEEEecCCCCCC---------------eEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEc
Q psy10566 379 ETELLRVKLNHSPEDS---------------LTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCR 440 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s 440 (604)
.+++....+.. +... +.+++|+|++ .+++++.+|.|++||+. ++.+..+..+ .+.+++|+
T Consensus 179 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 179 ISGTVMQHFEL-KETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp TTTEEEEEECC-C---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE
T ss_pred CCCcEEEEeec-cccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC
Confidence 99998887763 3344 8999999975 58899999999999995 4555556554 79999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEE
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
|+++.+++++.|+.|++||+.+......+. +...+.+++|+|++ .+++++.|+.|++||+++++.+..+..|...+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i-- 333 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI-- 333 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE--
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE--
Confidence 999999999999999999999877655554 78899999999999 99999999999999999999999998887754
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc--------------------ceEEeeCCCC--CeeEEEEcCCCCcEEEE
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKREL--------------------PIATLSGHTR--TVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~--------------------~~~~l~~h~~--~V~~v~~sp~~~~~l~s 577 (604)
..+.++|++++|++|+.||.|++||+.+++ ++..+.+|.. .|++++|+|+ +.+|++
T Consensus 334 -~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~ 411 (425)
T 1r5m_A 334 -FAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA-GNKISV 411 (425)
T ss_dssp -EEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT-SSEEEE
T ss_pred -EEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC-CceEEE
Confidence 445567999999999999999999999888 8899999976 9999999999 789999
Q ss_pred EeCCCcEEEECCC
Q psy10566 578 VSDDCTVRIWGPH 590 (604)
Q Consensus 578 ~s~Dg~I~iW~~~ 590 (604)
++.||.|++|+++
T Consensus 412 ~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 412 AYSLQEGSVVAIP 424 (425)
T ss_dssp EESSSCCEEEECC
T ss_pred EecCceEEEEeec
Confidence 9999999999986
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=316.13 Aligned_cols=285 Identities=14% Similarity=0.126 Sum_probs=226.3
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.+..|.+.|++++|+|+|++||+|+.|+.|+|||+. +........+.+|...|.+++|+|++++|++++.|+ +|++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~--~v~v 81 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQD--GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR--NAYV 81 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEE--TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS--SEEE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEcc--CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC--eEEE
Confidence 345577899999999999999999999999999998 333367788899999999999999999999999998 8999
Q ss_pred EECCCce---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC----eeeeeec-e--eEEEEEEcCCCCE
Q psy10566 376 WNIETEL---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ----VLDSWEG-V--RVNCLWCRSDGKS 445 (604)
Q Consensus 376 wd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~-~--~v~~l~~s~~g~~ 445 (604)
||+.++. ....+. .|...|.+++|+|++++|++++.|+.|++||++.. ....+.+ | .|.+++|+|++++
T Consensus 82 wd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp C------CCCCEEECC-CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEcCCCCceeeeeEec-ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 9999877 444443 68889999999999999999999999999999543 3555654 4 7999999999999
Q ss_pred EEEEeCCCeEEEEEcCCC------------------cccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce-
Q psy10566 446 VLAADTHHRIRTYNFEHL------------------TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL- 506 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~------------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~- 506 (604)
+++++.|+.|++||+... .....+.+...|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 999999999999998532 2222236788899999999999999999999999999999887
Q ss_pred ---eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc--c-------------------------e----
Q psy10566 507 ---LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL--P-------------------------I---- 552 (604)
Q Consensus 507 ---~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~--~-------------------------~---- 552 (604)
+..+.+|...+. .+.++|++++|++|+.++.+ +|+..... . .
T Consensus 241 ~~~~~~~~~~~~~v~---~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (377)
T 3dwl_C 241 PRALITVKLSQLPLR---SLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVS 316 (377)
T ss_dssp EEECCCEECSSSCEE---EEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----
T ss_pred ceeeEeecCCCCceE---EEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccc
Confidence 788888877544 44556899999999877766 66654111 0 0
Q ss_pred -----EEe----------------eCCCCCeeEEEEcCCCCc---EEEEEeCCCcEEEECC
Q psy10566 553 -----ATL----------------SGHTRTVSCVAWNPVYHQ---MIASVSDDCTVRIWGP 589 (604)
Q Consensus 553 -----~~l----------------~~h~~~V~~v~~sp~~~~---~l~s~s~Dg~I~iW~~ 589 (604)
..+ ..|.+.|+++++.+.++. .|+|||.||.|+|||+
T Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 317 FTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp --------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 011 139999999998765334 7999999999999985
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=315.57 Aligned_cols=294 Identities=12% Similarity=0.144 Sum_probs=238.3
Q ss_pred ccceeec-ccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCC-ce-eEeeEEeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 291 CETTQVL-NDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVT-FT-CQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 291 ~~~~~~l-~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~-~~-~~~~~~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
.+.+..+ .+|.+.|++++|+| ++++||+|+.||+|+|||+.... .. ......+ +|...|.+++|+|++++|++++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEe
Confidence 4667778 89999999999999 99999999999999999987200 11 2123333 4999999999999999999999
Q ss_pred CCCceEEEEEECC---CceEEEEe--------cC-C--CCCCeEEEE--EecCCCEEEEEecCCeEEEEEc-CCCeeeee
Q psy10566 367 PEDCHELWVWNIE---TELLRVKL--------NH-S--PEDSLTSCS--WNRDGTKFVCGGIRGQFYQCDI-EGQVLDSW 429 (604)
Q Consensus 367 ~d~~~~i~vwd~~---~~~~~~~~--------~~-~--~~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~ 429 (604)
.|+ .|++||+. +++..... .. . +...+.++. +++++.++++|+.||.|++||+ .++.+..+
T Consensus 131 ~dg--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 131 KDG--QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp TTS--EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCC--EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 998 89999995 44333221 11 1 455677777 5578999999999999999999 56777777
Q ss_pred ec----eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEEC----CCCCEEEEEecCCeEEEE
Q psy10566 430 EG----VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTID----ATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 430 ~~----~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s----~~~~~l~~~~~dg~I~lw 499 (604)
.+ ..|.+++|+|+++.+++++.||.|++||+++......+ .+..+|.+++++ +++.++++++.|+.|++|
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 65 37999999999999999999999999999987766544 567789999555 567899999999999999
Q ss_pred ecCCCceeeEeeccccceE-----------------------EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 500 DLRDRILLRKFQGVTQGQF-----------------------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~-----------------------~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
|+++++.+..+.++..... .+.++.++ ++++|++|+.||.|++||+.+++....+.
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 289 NFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp ETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 9999998888876542111 12333444 66899999999999999999999888877
Q ss_pred C-------------------------------------CCCCeeEEEEcCC-CCcEEEEEeCCCcEEEEC
Q psy10566 557 G-------------------------------------HTRTVSCVAWNPV-YHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 557 ~-------------------------------------h~~~V~~v~~sp~-~~~~l~s~s~Dg~I~iW~ 588 (604)
+ |...|++++|+++ +..+|+||+.||.|+||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 6 8899999999987 357999999999999995
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=316.02 Aligned_cols=310 Identities=14% Similarity=0.179 Sum_probs=252.9
Q ss_pred cCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeE
Q psy10566 273 LENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352 (604)
Q Consensus 273 ~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~ 352 (604)
.+....+|+....... +....+ .|...|++++|+|++++|++|+.||.|++|++............+.+|...|.+
T Consensus 43 ~d~~v~iw~~~~~~~~---~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~ 118 (416)
T 2pm9_A 43 TDSSLELWSLLAADSE---KPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKT 118 (416)
T ss_dssp CCCCCEEEESSSGGGC---SCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCE
T ss_pred CCCeEEEEEccCCCCC---cEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEE
Confidence 3455666765432211 122333 589999999999999999999999999999998322223467888999999999
Q ss_pred EEECCC-CCeEEEEeCCCceEEEEEECCCce------EEEEe--cCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcC
Q psy10566 353 LAWSPD-SSHLLVVGPEDCHELWVWNIETEL------LRVKL--NHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIE 422 (604)
Q Consensus 353 l~~spd-~~~l~s~~~d~~~~i~vwd~~~~~------~~~~~--~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~ 422 (604)
++|+|+ +.+|++++.|+ .|++||+.++. ..... ...|...|.+++|+|+ +..+++++.||.|++||++
T Consensus 119 ~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNG--EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp EEECSSSTTBEEEECSSS--CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEEcCCCCCEEEEEcCCC--eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 999998 89999999998 89999999876 33222 2357789999999998 7899999999999999995
Q ss_pred -CCeeeeeec--------eeEEEEEEcCCC-CEEEEEeCCC---eEEEEEcCCC-cccccc--cCCCCeeEEEECC-CCC
Q psy10566 423 -GQVLDSWEG--------VRVNCLWCRSDG-KSVLAADTHH---RIRTYNFEHL-TDSNLL--QEDHPVMSFTIDA-TDR 485 (604)
Q Consensus 423 -~~~~~~~~~--------~~v~~l~~s~~g-~~l~~~~~dg---~I~i~d~~~~-~~~~~~--~~~~~i~~~~~s~-~~~ 485 (604)
++.+..+.. ..+.+++|+|++ ..+++++.++ .|++||+++. .....+ .+...|.+++|+| ++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH 276 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC
Confidence 555555543 469999999997 6899999998 9999999985 344444 4788999999999 999
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEee--------
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATLS-------- 556 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l~-------- 556 (604)
++++++.|+.|++||+++++.+..+.+|...+.. +.++|++ .++++++.||.|++||+.++.......
T Consensus 277 ~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~---~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 353 (416)
T 2pm9_A 277 LLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFK---TKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQE 353 (416)
T ss_dssp CEEEEESSSEEEEECSSSCCEEEEEECSSSCCCC---EEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---------
T ss_pred eEEEEeCCCCEEEeeCCCCccceeecCCCCceEE---EEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccC
Confidence 9999999999999999999999999988875444 4557888 899999999999999998765433221
Q ss_pred ---------------------------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 557 ---------------------------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 557 ---------------------------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.|..++++++|+|+ +.+|++++.||+|+||++.+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 354 SETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFG-GKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------CCSCCCSSCCCCCSTTCCCSCCCEEETT-TEEECBCTTSSCBCCBCCCCC
T ss_pred CcccccccccccccccccccccccCCccccCCccceEEeeC-CeEEEEeCCCCeEEEEEeccC
Confidence 16678889999999 899999999999999999864
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=297.54 Aligned_cols=264 Identities=19% Similarity=0.265 Sum_probs=231.2
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+++.|....+|+.... .......+.+|...|.+++|+|++.++++|+.|++|++||+. ..+.+..+..|...
T Consensus 53 tgs~D~~v~vW~~~~~----~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~----~~~~~~~~~~~~~~ 124 (321)
T 3ow8_A 53 TGSLDDLVKVWKWRDE----RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE----NGKQIKSIDAGPVD 124 (321)
T ss_dssp EEETTSCEEEEEEETT----EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TTEEEEEEECCTTC
T ss_pred EEcCCCCEEEEECCCC----CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC----CCCEEEEEeCCCcc
Confidence 4555777778875322 123456789999999999999999999999999999999998 55667888889999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~ 428 (604)
+.+++|+|++++|++++.++ .|++||+.+++....+. .+...|.+++|+|++++|++|+.||.|++||+. ++.+..
T Consensus 125 ~~~~~~spdg~~l~~g~~dg--~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 125 AWTLAFSPDSQYLATGTHVG--KVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp CCCEEECTTSSEEEEECTTS--EEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCC--cEEEEEcCCCceeEEec-CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 99999999999999999998 89999999998877776 567789999999999999999999999999994 677777
Q ss_pred eece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 429 WEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 429 ~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
+.++ .|.+++|+|+++++++++.|+.|++||+++...... ..|...|.+++|+|++.++++++.|++|++||+.+++
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 7766 699999999999999999999999999988765544 4478889999999999999999999999999999999
Q ss_pred eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 506 LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 506 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++..+.+|...+.. +.++|++++|++++.||.|++||..
T Consensus 282 ~~~~~~~h~~~v~~---v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 282 CVHTFFDHQDQVWG---VKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECCCSSCEEE---EEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEcCCCCcEEE---EEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999885544 4557999999999999999999963
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=308.84 Aligned_cols=378 Identities=18% Similarity=0.276 Sum_probs=233.2
Q ss_pred CChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHH
Q psy10566 84 RTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILE 163 (604)
Q Consensus 84 ~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 163 (604)
..++|++|+|+|||+|+||.+++++|++|+++.++. ....+...++++.|+.+..+-.++.. ++
T Consensus 6 ~q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~w~~~~~l~~~~~~---------------~~ 69 (410)
T 1vyh_C 6 RQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNE-ELDKKYAGLLEKKWTSVIRLQKKVME---------------LE 69 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHhCCCCCc-chhhhhhchhhhhhhheeeHHHHHHH---------------HH
Confidence 357899999999999999999999999999988764 34566778889999887764332211 00
Q ss_pred HHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhhccccchHHHhhhhccCCCChhhHHHHHHHhhhcCCCCccCC
Q psy10566 164 QKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLP 243 (604)
Q Consensus 164 ~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p 243 (604)
.+.-+. ..++.... + + ........|..... ....+.
T Consensus 70 ~~~~~~-------------~~~~~~~~--~-----~---------~~~~~~~~~~~~~~---------------~~~~l~ 105 (410)
T 1vyh_C 70 SKLNEA-------------KEEFTSGG--P-----L---------GQKRDPKEWIPRPP---------------EKYALS 105 (410)
T ss_dssp ---------------------------------------------------CCCCCCSS---------------CSCEEE
T ss_pred HHHHHH-------------HHHHhccC--C-----c---------cccCCccccccCCC---------------ceEeec
Confidence 000000 00000000 0 0 00000000110000 000000
Q ss_pred hhHHHHHHHHHHHHhHhcCCCCCCC---cccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEE
Q psy10566 244 PRRLQTLLSQAVDLQKYHCPYHNTK---VDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGS 320 (604)
Q Consensus 244 ~~rl~~ll~q~~~~q~~~~~~~~~~---~~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs 320 (604)
.++ ..+....+++.. ..++.|....+||... .+..+.+.+|.+.|++++|+|+|++|++|+
T Consensus 106 gh~----------~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~------~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs 169 (410)
T 1vyh_C 106 GHR----------SPVTRVIFHPVFSVMVSASEDATIKVWDYET------GDFERTLKGHTDSVQDISFDHSGKLLASCS 169 (410)
T ss_dssp CCS----------SCEEEEEECSSSSEEEEEESSSCEEEEETTT------CCCCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ccC----------CcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------CcEEEEEeccCCcEEEEEEcCCCCEEEEEe
Confidence 000 000111122211 1344566777787543 356688999999999999999999999999
Q ss_pred CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEE
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW 400 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 400 (604)
.|++|+|||+. ....+..+.+|...|.+++|+|++++|++++.|+ +|++||+.++.++..+. +|...|.+++|
T Consensus 170 ~D~~i~iwd~~----~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~--~i~~wd~~~~~~~~~~~-~h~~~v~~~~~ 242 (410)
T 1vyh_C 170 ADMTIKLWDFQ----GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK--TIKMWEVQTGYCVKTFT-GHREWVRMVRP 242 (410)
T ss_dssp TTSCCCEEETT----SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTS--EEEEEETTTCCEEEEEE-CCSSCEEEEEE
T ss_pred CCCeEEEEeCC----CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCC--eEEEEECCCCcEEEEEe-CCCccEEEEEE
Confidence 99999999998 5567888999999999999999999999999998 89999999999888776 68889999999
Q ss_pred ecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCC--------------------CCEEEEEeCCCeEEE
Q psy10566 401 NRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSD--------------------GKSVLAADTHHRIRT 457 (604)
Q Consensus 401 ~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~--------------------g~~l~~~~~dg~I~i 457 (604)
+|++.++++|+.|+.|++||+. ++....+.+| .|.+++|+|+ +.++++++.|+.|++
T Consensus 243 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 9999999999999999999994 5666666665 6999999996 678999999999999
Q ss_pred EEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe
Q psy10566 458 YNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 458 ~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs 536 (604)
||+.++..... ..|...|.+++|+|+++++++++.|+.|++||+.+++++..+.+|...+ .++.++|++.+|++|+
T Consensus 323 wd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v---~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV---TSLDFHKTAPYVVTGS 399 (410)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCE---EEEEECSSSSCEEEEE
T ss_pred EECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE---EEEEEcCCCCEEEEEe
Confidence 99998765544 4578899999999999999999999999999999999999999998854 4456679999999999
Q ss_pred CCCcEEEEeCC
Q psy10566 537 EDGKVYIWHVK 547 (604)
Q Consensus 537 ~dg~I~iwd~~ 547 (604)
.||+|+||+.+
T Consensus 400 ~D~~i~vW~~r 410 (410)
T 1vyh_C 400 VDQTVKVWECR 410 (410)
T ss_dssp TTSEEEEEC--
T ss_pred CCCcEEEEeCC
Confidence 99999999863
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=303.41 Aligned_cols=298 Identities=16% Similarity=0.220 Sum_probs=241.2
Q ss_pred cceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeE----E-----eccCCCCeeEEEECC-CCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRK----T-----LEGHTLGVAYLAWSP-DSS 360 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~----~-----l~~h~~~V~~l~~sp-d~~ 360 (604)
+....+.+|.+.|++++|+| ++++||+|+.||.|+|||+........... . ..+|...|.+++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 34567888999999999999 999999999999999999984322111110 0 135999999999999 778
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC---CCEEEEEecCCeEEEEEcC-CCeeeeeece--eE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD---GTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RV 434 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v 434 (604)
++++++.|+ .|++||+.++.....+. +...+.++.|++. +..+++++.||.|++||+. ++.+..+.++ .|
T Consensus 114 ~l~s~~~d~--~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v 189 (408)
T 4a11_B 114 MFTSSSFDK--TLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI 189 (408)
T ss_dssp CEEEEETTS--EEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE
T ss_pred EEEEEeCCC--eEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE
Confidence 999999998 89999999999888776 5677999999984 4599999999999999995 6666666655 79
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcc-cc----------------cccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 435 NCLWCRSDGK-SVLAADTHHRIRTYNFEHLTD-SN----------------LLQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 435 ~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~-~~----------------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
.+++|+|++. .+++++.||.|++||++.... .. ...+...|.+++|+|+++++++++.|+.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999999 488999999999999976541 11 13467889999999999999999999999
Q ss_pred EEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 497 HLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
++||+.+++....+..+... ...+........+..+++++.|+.|++||+.+++++..+.+|.+.|++++|+|+ +.+
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~ 348 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN-FQE 348 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETT-TTE
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCC-CCE
Confidence 99999998776554432211 011111222344556777788999999999999999999999999999999999 899
Q ss_pred EEEEeCCCcEEEECCCCCCC
Q psy10566 575 IASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~~~ 594 (604)
|++++.||.|++|++.+++.
T Consensus 349 l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTSCEEEEEECC---
T ss_pred EEEECCCCeEEEEeCCCCCc
Confidence 99999999999999998764
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=301.38 Aligned_cols=277 Identities=18% Similarity=0.276 Sum_probs=231.9
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.++.++||++ ++||+|. |++|+|||.. ++.......+.+|...|++|+|+|+|++|++|+.|+ +|++||+.+++
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~--tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--EVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--CEEEEETTTTE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECC--CCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--eEEEEEcCCCc
Confidence 3667999986 4787775 9999999998 444444556667888999999999999999999998 89999999999
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
.+..+. +|...+.+++| ++..+++|+.|+.+++||.. ...+..+.+| .+..+.++++++.+++++.|+.+++|
T Consensus 181 ~~~~~~-~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 181 RLRNMT-SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEe-CCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 888876 78888888776 46799999999999999984 4555666665 69999999999999999999999999
Q ss_pred EcCCCccc-----ccccCCCCeeEEEECCCCCEE-EE--EecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc
Q psy10566 459 NFEHLTDS-----NLLQEDHPVMSFTIDATDRLA-LL--NVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD 530 (604)
Q Consensus 459 d~~~~~~~-----~~~~~~~~i~~~~~s~~~~~l-~~--~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 530 (604)
+....... ....+...|.+++|+|.+..+ ++ |+.|+.|++||+.++.+...+..+.. +..+.++++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~----v~~~~~~~~~~ 333 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ----VCSILWSPHYK 333 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC----EEEEEEETTTT
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc----eeeeeecCCCC
Confidence 99876432 234467889999999977544 44 34689999999999999988887654 23344457888
Q ss_pred EEEEEe--CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 531 FVASGS--EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 531 ~l~sgs--~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+++++ .||.|+|||+.+++++.++.+|.+.|++++|+|+ +.+|+||+.||+|+|||+....
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd-g~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSCSS
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCCCC
Confidence 887765 7999999999999999999999999999999999 8899999999999999997643
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-35 Score=295.43 Aligned_cols=263 Identities=17% Similarity=0.245 Sum_probs=229.0
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
..+.|....+|+.. ....+..+..|...|.+++|+|+|++|++|+.|+.|++|++............+.+|...
T Consensus 72 s~s~Dg~v~iWd~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~ 145 (340)
T 1got_B 72 SASQDGKLIIWDSY------TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY 145 (340)
T ss_dssp EEETTTEEEEEETT------TCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSC
T ss_pred EEeCCCcEEEEECC------CCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCcc
Confidence 34446667777643 245677888999999999999999999999999999999998544445667788999999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~ 428 (604)
|.++.|++++. +++++.|+ +|++||+.++.....+. +|...|.+++|+|++.++++|+.|+.|++||+ .+.....
T Consensus 146 v~~~~~~~~~~-l~s~s~d~--~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 146 LSCCRFLDDNQ-IVTSSGDT--TCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221 (340)
T ss_dssp EEEEEEEETTE-EEEEETTS--CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEEEECCCCc-EEEEECCC--cEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence 99999998875 88899998 89999999999888776 68889999999999999999999999999999 5677777
Q ss_pred eece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 429 WEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 429 ~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
+.+| .|.+++|+|+++.+++++.|+.|++||++.......+.+ ...|.+++|+|+++++++|+.|+.|++||+.+
T Consensus 222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 7766 699999999999999999999999999998765554443 34799999999999999999999999999999
Q ss_pred CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 504 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
++.+..+.+|...+. ++.++|++.+|++|+.||.|+|||
T Consensus 302 ~~~~~~~~~h~~~v~---~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 302 ADRAGVLAGHDNRVS---CLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCEEEEEECCSSCEE---EEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcEeeEeecCCCcEE---EEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999988544 455679999999999999999997
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=305.39 Aligned_cols=286 Identities=20% Similarity=0.216 Sum_probs=241.4
Q ss_pred ccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEe----CCCCc--eeEeeEEecc----------CCCCeeEEEECCCCC
Q psy10566 298 NDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDV----DPVTF--TCQHRKTLEG----------HTLGVAYLAWSPDSS 360 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~----~~~~~--~~~~~~~l~~----------h~~~V~~l~~spd~~ 360 (604)
..|.+.|++++|+|+|+ +||+|+.||.|++|++ ..... .......+.. |...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34569999999999999 9999999999999999 62221 0002333333 678999999999999
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--e----
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--R---- 433 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~---- 433 (604)
+|++++.++ .|++|| .++.....+. .|...|.+++|+|++++|++++.||.|++||+. ++.+..+..+ .
T Consensus 122 ~l~~~~~dg--~i~i~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 122 SIVTGVENG--ELRLWN-KTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEEETTS--CEEEEE-TTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEEeCCC--eEEEEe-CCCCeeeecc-CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 999999998 899999 5666666665 688899999999999999999999999999994 5555555443 2
Q ss_pred -----------EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 434 -----------VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 434 -----------v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
+.++.+++++ .+++++.++.|++||+.+......+ .+...+.+++|+|+++++++++.|+.|++||+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECS
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 7888898875 5889999999999999987665444 57889999999999999999999999999999
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
++++.+..+.+|...+.. +.++|++ ++++++.||.|++||+.+++.+..+..|...|.+++|+|+ +.+|++++.|
T Consensus 277 ~~~~~~~~~~~~~~~i~~---~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d 351 (425)
T 1r5m_A 277 GNGNSQNCFYGHSQSIVS---ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD-GQKYAVAFMD 351 (425)
T ss_dssp SSBSCSEEECCCSSCEEE---EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT-SSEEEEEETT
T ss_pred CCCccceEecCCCccEEE---EEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC-CCEEEEEECC
Confidence 999999999888775444 4556888 9999999999999999999999999999999999999999 8999999999
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
|.|++|++.++.
T Consensus 352 g~i~i~~~~~~~ 363 (425)
T 1r5m_A 352 GQVNVYDLKKLN 363 (425)
T ss_dssp SCEEEEECHHHH
T ss_pred CeEEEEECCCCc
Confidence 999999997654
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=312.92 Aligned_cols=287 Identities=14% Similarity=0.198 Sum_probs=240.0
Q ss_pred CCCcEEEEEEcCCCC-eEEEE----------ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 300 HCDEVWFCKFSPDGL-KLATG----------SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 300 H~~~V~~v~fspdg~-~lasg----------s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
+...|.+++|+|+|+ +||+| +.|+.|+|||+...... .....+ .|...|.+++|+|++++|++++.|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d 88 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE-KPIASL-QVDSKFNDLDWSHNNKIIAGALDN 88 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-SCSCCC-CCSSCEEEEEECSSSSCEEEEESS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC-cEEEEE-ecCCceEEEEECCCCCeEEEEccC
Confidence 345788999999997 99999 88999999999832111 122333 588999999999999999999999
Q ss_pred CceEEEEEECCC----ceEEEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCe-------eeee---ec--
Q psy10566 369 DCHELWVWNIET----ELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQV-------LDSW---EG-- 431 (604)
Q Consensus 369 ~~~~i~vwd~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~-------~~~~---~~-- 431 (604)
+ .|++||+.+ ......+. .|...|.+++|+|+ +.++++++.||.|++||+.... .... ..
T Consensus 89 g--~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 89 G--SLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp S--CEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred C--eEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 8 899999988 33555554 78899999999998 8999999999999999995322 2222 22
Q ss_pred eeEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccccC-------CCCeeEEEECCCC-CEEEEEecCC---eEEEE
Q psy10566 432 VRVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQE-------DHPVMSFTIDATD-RLALLNVSTQ---GVHLW 499 (604)
Q Consensus 432 ~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~~-------~~~i~~~~~s~~~-~~l~~~~~dg---~I~lw 499 (604)
..+.+++|+|+ +..+++++.|+.|++||+++.+....+.. ...+.+++|+|++ .++++++.++ .|++|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 37999999999 78999999999999999998766555443 6789999999997 6899999998 99999
Q ss_pred ecCCC-ceeeEee-ccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEE
Q psy10566 500 DLRDR-ILLRKFQ-GVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 500 d~~~~-~~~~~~~-~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
|++++ .++..+. +|...+.. +.++| ++++|++++.||.|++||+.+++++..+.+|...|++++|+|+++.+|+
T Consensus 246 d~~~~~~~~~~~~~~~~~~v~~---~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 246 DLRNANTPLQTLNQGHQKGILS---LDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp ETTSTTSCSBCCCSCCSSCEEE---EEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred eCCCCCCCcEEeecCccCceeE---EEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEE
Confidence 99986 6677777 77775444 44567 8999999999999999999999999999999999999999999448999
Q ss_pred EEeCCCcEEEECCCCCCC
Q psy10566 577 SVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~~~~ 594 (604)
+++.||.|++|++.....
T Consensus 323 s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 323 CASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ECCSSSEEEEEESCCCCC
T ss_pred EEecCCcEEEEEccCCCC
Confidence 999999999999988763
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=284.04 Aligned_cols=276 Identities=17% Similarity=0.261 Sum_probs=224.4
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL 383 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~ 383 (604)
+.+|+||+++ +||+| .|++|+|||+. ++.......+.+|...|++++|+|++++|++|+.|+ +|++||+++++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~--tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--EVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--EEEEEETTTTEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECC--CCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--cEEEeecCCcee
Confidence 5679999986 77776 49999999998 333334445567888999999999999999999998 899999999998
Q ss_pred EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy10566 384 RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYN 459 (604)
Q Consensus 384 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d 459 (604)
+..+. +|...+.++ ++++..+++++.++.+.+|+.. ...+..+.++ .+..+.+.++++.+++++.|+.|++||
T Consensus 102 ~~~~~-~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 102 LRNMT-SHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEEE-CCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEec-CccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 88876 666666654 5567899999999999999984 3455555554 689999999999999999999999999
Q ss_pred cCCCcccc-----cccCCCCeeEEEECCCCCEEE---EEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 460 FEHLTDSN-----LLQEDHPVMSFTIDATDRLAL---LNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 460 ~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~---~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
+++.+... ...+...+.++.++|++..++ +++.++.|++||............... +..+.+.++++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~----v~~~~~~~~~~~ 254 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ----VCSILWSPHYKE 254 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC----EEEEEEETTTTE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee----eeeeeecccccc
Confidence 98765322 233577899999999876443 556789999999998877666554332 223344577777
Q ss_pred EEEEe--CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 532 VASGS--EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 532 l~sgs--~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++ .||.|+|||+.+++++.++.+|.+.|++++|+|+ +.+|+|||.||+|+|||+....
T Consensus 255 ~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd-g~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 255 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSCCC
T ss_pred eEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCCCC
Confidence 76654 7999999999999999999999999999999999 8899999999999999997643
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=296.63 Aligned_cols=298 Identities=15% Similarity=0.128 Sum_probs=244.5
Q ss_pred CCCCccceeecccCCCcEEEEEEcCC---CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEE
Q psy10566 287 EEFPCETTQVLNDHCDEVWFCKFSPD---GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL 363 (604)
Q Consensus 287 ~~~p~~~~~~l~~H~~~V~~v~fspd---g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~ 363 (604)
...|.+.+..+.+|.+.|++++|+|+ |++|++|+.||.|+|||+.. ........+.+|...|.+++|+|++++|+
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD--SGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT--TSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC--CCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 44577888899999999999999999 69999999999999999983 12333477888999999999999999999
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEE--ecCCCEEEEEecCCeEEEEEcC-CCeeeeeece-eEEEEEE
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW--NRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV-RVNCLWC 439 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~ 439 (604)
+++.|+ .|++||+.++...... .|...|.+++| +|++.+|++++.||.|++||+. ++.+..+..+ .+.++.+
T Consensus 103 s~~~dg--~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 103 TASCDK--TAKMWDLSSNQAIQIA--QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV 178 (368)
T ss_dssp EEETTS--EEEEEETTTTEEEEEE--ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred EEcCCC--cEEEEEcCCCCceeec--cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence 999998 8999999999877754 47889999999 8899999999999999999994 5666666554 4455544
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCcccccc---cCCCCeeEEEECCCCCE----EEEEecCCeEEEEecCCC---ceeeE
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLL---QEDHPVMSFTIDATDRL----ALLNVSTQGVHLWDLRDR---ILLRK 509 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~---~~~~~i~~~~~s~~~~~----l~~~~~dg~I~lwd~~~~---~~~~~ 509 (604)
. +..+++++.++.+.+|++......... .....+.++.+.++... +++++.|+.|++||++.. ..+..
T Consensus 179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred c--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 4 558899999999999999875432211 23455666666665554 999999999999999987 56677
Q ss_pred eeccccceE---------EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 510 FQGVTQGQF---------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 510 ~~~~~~~~~---------~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
+.+|..... .+.++.++|++++|++|+.||.|++||+.+++++..+.+|...|++++|+|+ +.+|++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~s~ 335 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHN-GNIFAYASS 335 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTT-SSCEEEEEC
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCC-CCeEEEEec
Confidence 777664211 3566677899999999999999999999999999999999999999999999 899999999
Q ss_pred CCcEEEECCCCCC
Q psy10566 581 DCTVRIWGPHLNT 593 (604)
Q Consensus 581 Dg~I~iW~~~~~~ 593 (604)
|+..+.|++-..+
T Consensus 336 d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 336 YDWSKGHEFYNPQ 348 (368)
T ss_dssp CCSTTCGGGCCTT
T ss_pred ccccccccccCCC
Confidence 9877666654443
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=328.12 Aligned_cols=292 Identities=15% Similarity=0.180 Sum_probs=256.1
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+..+.+.+|.+.|++++|+|+|++||+|+.||.|+|||+. ++.....+.+|..+|.+++|+|++++|++++.++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-- 77 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYE----TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF-- 77 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS--
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECC----CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC--
Confidence 4567899999999999999999999999999999999998 5667788889999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--Ceeeeeece--eEEEEEEcC-CCCEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV--RVNCLWCRS-DGKSV 446 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~--~v~~l~~s~-~g~~l 446 (604)
.|++||+.+++....+. .|...|.+++|+|+++++++++.||.|++||++. .....+.++ .+.+++|+| ++..+
T Consensus 78 ~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred eEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 89999999999888776 6888999999999999999999999999999953 445555554 699999999 89999
Q ss_pred EEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
++++.||.|++||+.+........ +...+.+++|+| ++.++++++.||.|++||+.+++.+..+.+|...+ .+
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v---~~ 233 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV---SF 233 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE---EE
T ss_pred EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE---EE
Confidence 999999999999998766554443 347899999999 99999999999999999999999999999887754 44
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.++|+++++++|+.||.|++||..+++.+..+..|...|.+++|+|++..++++++.|+.+.+|++....
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 55679999999999999999999999999999999999999999999954443444456678889876543
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=304.93 Aligned_cols=300 Identities=14% Similarity=0.174 Sum_probs=242.9
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
+....+|+... .+....+.+| ..+....|+|++++||+|+.||.|+|||+. .......+.+|...|.++
T Consensus 77 d~~v~i~d~~~------~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~~ 145 (420)
T 3vl1_A 77 DGHDFLFNTII------RDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSN----FNLQREIDQAHVSEITKL 145 (420)
T ss_dssp TTEEEEEECCS------EETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTT----SCEEEEETTSSSSCEEEE
T ss_pred CCcEEEEEecc------cceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCC----CcceeeecccccCccEEE
Confidence 44555565432 2223445555 555666899999999999999999999988 556677788999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV 432 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~ 432 (604)
+|+|++++|++++.|+ .|++||+.+++....+. +|...|.+++|+|++++|++++.||.|++||+. ++.+..+..+
T Consensus 146 ~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 222 (420)
T 3vl1_A 146 KFFPSGEALISSSQDM--QLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRK 222 (420)
T ss_dssp EECTTSSEEEEEETTS--EEEEEETTTCCCCEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBT
T ss_pred EECCCCCEEEEEeCCC--eEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecC
Confidence 9999999999999998 89999999998877775 688999999999999999999999999999995 6666666531
Q ss_pred -----eEEE---------------------EEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCC
Q psy10566 433 -----RVNC---------------------LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATD 484 (604)
Q Consensus 433 -----~v~~---------------------l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~ 484 (604)
.+.+ ++|+|+++.+++++.||.|++||+++........ +...+.+++|+|++
T Consensus 223 ~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (420)
T 3vl1_A 223 ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNN 302 (420)
T ss_dssp TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSC
T ss_pred CCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCC
Confidence 3444 4557899999999999999999999876554443 56789999999999
Q ss_pred C-EEEEEecCCeEEEEecCCCce-eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC---------cceE
Q psy10566 485 R-LALLNVSTQGVHLWDLRDRIL-LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE---------LPIA 553 (604)
Q Consensus 485 ~-~l~~~~~dg~I~lwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~---------~~~~ 553 (604)
. ++++++.||.|++||+++++. +..+.++... .+..+++ +++++|++++.||.|++||+... ....
T Consensus 303 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~--~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 379 (420)
T 3vl1_A 303 ANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT--PINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPT 379 (420)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS--CEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCE
T ss_pred CCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC--CceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCcc
Confidence 9 999999999999999998754 7777764433 2333444 57889999999999999998863 2234
Q ss_pred EeeCCCCCeeEEEEcCCCCc---EEEEEeCCCcEEEECCCC
Q psy10566 554 TLSGHTRTVSCVAWNPVYHQ---MIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 554 ~l~~h~~~V~~v~~sp~~~~---~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.+|.+.|.+++|+|+ +. .+++++.+|.+.+|++..
T Consensus 380 ~~~~~~~~v~~~~~s~~-~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 380 FLVSNDDAVSQFCYVSD-DESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EECCSSCCCCEEEEECC-SSSSCEEEEEETTTEEEEEESCC
T ss_pred EEccCCcceEEEEEccC-CCCcceEEEEcCCceEEEEeccC
Confidence 56678899999999999 56 677777899999999865
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=287.32 Aligned_cols=262 Identities=18% Similarity=0.226 Sum_probs=203.7
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CCeEEEEeCCCce
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPEDCH 371 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~~~ 371 (604)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+. .........+.+|..+|.+++|+|+ +++|++++.|+
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~--~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-- 77 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-- 77 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBC--SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT--
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecC--CCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC--
Confidence 34678999999999999999999999999999999997 2234567889999999999999864 88999999999
Q ss_pred EEEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-e--eeeeece--eEEEEEEcCC
Q psy10566 372 ELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ-V--LDSWEGV--RVNCLWCRSD 442 (604)
Q Consensus 372 ~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~--~~~~~~~--~v~~l~~s~~ 442 (604)
+|++||+.++. ....+ ..|...|.+++|+|+ +.+|++++.|+.|++||+... . ...+.+| .|.+++|+|+
T Consensus 78 ~v~iWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEEEEBSSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred EEEEEEcCCCceEEEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 89999998874 33333 367888999999997 889999999999999998532 1 2233333 4666777665
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc----eeeEeeccccceE
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI----LLRKFQGVTQGQF 518 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~----~~~~~~~~~~~~~ 518 (604)
+..-. +. ....++++++++++.|+.|++||++++. ....+.+|...+.
T Consensus 157 ~~~~~-----~~-----------------------~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 157 TIEED-----GE-----------------------HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp C----------------------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred ccccc-----cc-----------------------CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceE
Confidence 42100 00 0012346899999999999999998765 5667888887544
Q ss_pred EEEeeeCCCC---CcEEEEEeCCCcEEEEeCCCCcc---eEEe--eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 519 TIHSCFGGAN---QDFVASGSEDGKVYIWHVKRELP---IATL--SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 519 ~i~~~~~~~~---~~~l~sgs~dg~I~iwd~~~~~~---~~~l--~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.+.++|+ +.+|++|+.|++|+|||+.++.. ...+ .+|...|.+++|+|+ +.+||+++.||+|++|+..
T Consensus 209 ---~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 209 ---DVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ---EEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS-SCCEEEEETTSCEEEEEEC
T ss_pred ---EEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCC-CCEEEEEcCCCcEEEEEEC
Confidence 4555677 48999999999999999987431 2233 467889999999999 8999999999999999986
Q ss_pred CC
Q psy10566 591 LN 592 (604)
Q Consensus 591 ~~ 592 (604)
..
T Consensus 285 ~~ 286 (297)
T 2pm7_B 285 LE 286 (297)
T ss_dssp TT
T ss_pred CC
Confidence 43
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=300.32 Aligned_cols=286 Identities=16% Similarity=0.115 Sum_probs=218.5
Q ss_pred CcEEEEEEcCCCCeEEEEECCC-------eEEEEEeCCCCce------eEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDT-------TVIIWDVDPVTFT------CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg-------~i~iwd~~~~~~~------~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.+|++++|+|||++||+||.|. .|++|++...... ......+.+|...|.+++++ ++.+++++.+
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 4799999999999999997543 5999999743221 12234577888999988765 4567766432
Q ss_pred C---------ceEEEEEECCCceEEE----Eec----CCCCCCeEEEEEecCCCEEEEEe--cCCeEEEEEcC-CCeeee
Q psy10566 369 D---------CHELWVWNIETELLRV----KLN----HSPEDSLTSCSWNRDGTKFVCGG--IRGQFYQCDIE-GQVLDS 428 (604)
Q Consensus 369 ~---------~~~i~vwd~~~~~~~~----~~~----~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~-~~~~~~ 428 (604)
+ ...+++|++.+..... ... ..+...+.+++|+|||+++++++ .|++|++||+. ++.+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 1 1279999986643211 111 12345688999999999987554 68999999995 555555
Q ss_pred eec-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc---cccCCCCeeEEEECCCCCEEEEEecCC----eEEEEe
Q psy10566 429 WEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN---LLQEDHPVMSFTIDATDRLALLNVSTQ----GVHLWD 500 (604)
Q Consensus 429 ~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~dg----~I~lwd 500 (604)
+.. ..|.+++|+|+|+++++++.+ .+.+|+..++.... ...+...+.+++|+|++..+++++.++ .+++||
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 543 379999999999999998855 56666665554322 234677899999999999999999887 688899
Q ss_pred cCCCce----eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe-eCCCCCeeEEEEcCCCCcEE
Q psy10566 501 LRDRIL----LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 501 ~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~l 575 (604)
+..... ...+.+|... +.++.++|+|++||+|+.|++|+|||+.+++++.++ .+|...|++|+|+|+ +.+|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~---V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd-g~~l 327 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKG---ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD-STYV 327 (365)
T ss_dssp EETTEEEEEEEEEEESSCSC---EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT-SCEE
T ss_pred cccceecceeeeeecCCCCC---eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCC-CCEE
Confidence 877643 3445566664 455667899999999999999999999999999875 789999999999999 8999
Q ss_pred EEEeCCCcEEEECCCCCCC
Q psy10566 576 ASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~~~~ 594 (604)
||||.|++||||++.....
T Consensus 328 aS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 328 ASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp EEEETTSEEEEEECCTTTT
T ss_pred EEEeCCCeEEEEEcCCCCc
Confidence 9999999999999976543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=298.78 Aligned_cols=284 Identities=15% Similarity=0.230 Sum_probs=233.8
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
..+|.+.+.+.++++++..+++++.|+.|++||+. .......+.. |...|.+++|+|++++|++++.++ .|++
T Consensus 87 ~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~----~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg--~i~i 160 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSNLNVVAVALERNVYVWNAD----SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG--LVDI 160 (401)
T ss_dssp CTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETT----TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS--CEEE
T ss_pred CCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCC----CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC--eEEE
Confidence 34777765444444344668888999999999998 3333344443 889999999999999999999998 8999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEEEEeC
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~ 451 (604)
||+.+++....+. .|...|.+++| ++..+++++.||.|++||++ +..+..+.++ .|.+++|+|+++.+++++.
T Consensus 161 wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 161 YDVESQTKLRTMA-GHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp EETTTCCEEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EECcCCeEEEEec-CCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 9999999888876 78899999999 56799999999999999995 5556666665 7999999999999999999
Q ss_pred CCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEE-EEe--cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 452 HHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLAL-LNV--STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 452 dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~-~~~--~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
|+.|++||+++......+ .+...|.+++|+|++..++ +++ .|+.|++||+.+++.+..+..+. .+..+.++|
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~----~v~~~~~s~ 313 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS----QVTSLIWSP 313 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS----CEEEEEECS
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC----cEEEEEECC
Confidence 999999999987655444 5788999999999875554 443 69999999999999988886433 355566789
Q ss_pred CCcEEEEE--eCCCcEEEEeCCCCcceE--EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 528 NQDFVASG--SEDGKVYIWHVKRELPIA--TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 528 ~~~~l~sg--s~dg~I~iwd~~~~~~~~--~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
++++++++ +.||.|++||+.+++... .+.+|...|.+++|+|+ +.+|++++.||.|++|++.+++.
T Consensus 314 ~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 314 HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD-GRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT-SSEEEEECTTSEEEEEECCC---
T ss_pred CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCcc
Confidence 99999994 489999999999865544 46799999999999999 89999999999999999988764
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=302.89 Aligned_cols=285 Identities=16% Similarity=0.272 Sum_probs=230.8
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC-------ceeEeeEEeccCC------------CCeeEEEECCCC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT-------FTCQHRKTLEGHT------------LGVAYLAWSPDS 359 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~-------~~~~~~~~l~~h~------------~~V~~l~~spd~ 359 (604)
.|.+.|++++|+|+|++||+|+.||.|+||++.... ........+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 378999999999999999999999999999998322 2233577888998 889999999998
Q ss_pred --CeEEEEeCCCceEEEEEECCCceEE---------------------------------------EEecCCCCCCeEEE
Q psy10566 360 --SHLLVVGPEDCHELWVWNIETELLR---------------------------------------VKLNHSPEDSLTSC 398 (604)
Q Consensus 360 --~~l~s~~~d~~~~i~vwd~~~~~~~---------------------------------------~~~~~~~~~~v~~~ 398 (604)
..|++++.|+ +|++||+.++... ..+..+|...|.++
T Consensus 106 ~~~~l~s~s~d~--~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 106 NAAQFLLSTNDK--TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SSSEEEEEECSS--CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CcceEEEeCCCC--eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 7899999998 8999999875442 13345788999999
Q ss_pred EEecCCCEEEEEecCCeEEEEEcC--CCeeee-------eece--eEEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCcc-
Q psy10566 399 SWNRDGTKFVCGGIRGQFYQCDIE--GQVLDS-------WEGV--RVNCLWCRSDG-KSVLAADTHHRIRTYNFEHLTD- 465 (604)
Q Consensus 399 ~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~-------~~~~--~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~~~~- 465 (604)
+|+|++++|++| .|+.|++||++ ++.+.. +.++ .|.+++|+|++ +.+++++.||.|++||+++...
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 79999999997 333332 2233 69999999998 9999999999999999998765
Q ss_pred ---ccccc-CCC------------CeeEEEECCCCCEEEEEecCCeEEEEecCC-CceeeEeeccccceE----------
Q psy10566 466 ---SNLLQ-EDH------------PVMSFTIDATDRLALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQF---------- 518 (604)
Q Consensus 466 ---~~~~~-~~~------------~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~---------- 518 (604)
...+. +.. .|.+++|+|+++++++++. +.|++||+++ ++++..+.+|.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 33333 333 8999999999999999999 9999999997 888888888764211
Q ss_pred --EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC---------------------------------CCCCee
Q psy10566 519 --TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---------------------------------HTRTVS 563 (604)
Q Consensus 519 --~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~---------------------------------h~~~V~ 563 (604)
.+..+.++|++++|++|+.||.|++||+.+++.+ .+.+ +...|.
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 0112455799999999999999999999988765 3332 245789
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 564 CVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.++|+|+ +.+||+++.++ +++|..+
T Consensus 421 ~~~~~p~-~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 421 HTAWHPK-ENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EEEECSS-SSEEEEECSSC-EEEEECC
T ss_pred EEEECCC-CCEEEEEecce-eeeeccc
Confidence 9999999 88999998876 7777543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=301.98 Aligned_cols=284 Identities=15% Similarity=0.223 Sum_probs=242.6
Q ss_pred ceeecccCCCcE-EEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 293 TTQVLNDHCDEV-WFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~H~~~V-~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
....+.+|.+.| .++.| ++++|++|+.||+|++||+. +.+....+.+|...|.+++|+|++ .+++++.|+
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~----~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg-- 183 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDR-- 183 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTS--
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECC----CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCC--
Confidence 446788999885 66666 56799999999999999998 566788899999999999999988 899999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEe--cCCCEEEEEecCCeEEEEEcCCCe------------------------
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWN--RDGTKFVCGGIRGQFYQCDIEGQV------------------------ 425 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~------------------------ 425 (604)
+|++||+.+++....+. +|...|.+++|+ +++.++++|+.||.|++||+....
T Consensus 184 ~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp CEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 89999999999888776 688999999999 477899999999999999995321
Q ss_pred eeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 426 LDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 426 ~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
+....++.....+++++++.+++++.|+.|++||+.+.+....+ .+...|.+++|+|+++++++++.|+.|++||++++
T Consensus 263 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 263 VGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred EEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 33445554334455788999999999999999999987665544 47889999999999999999999999999999999
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
+.+..+.+|...+..+. + +++++++|+.||.|++||+.++....... |...+..++|+|+ +.++++++ ||.|
T Consensus 343 ~~~~~~~~h~~~v~~~~---~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~-~~~l~~~~-dg~i 414 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLR---L--SDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVS-DNILVSGS-ENQF 414 (464)
T ss_dssp EEEEEECCCSSCEEEEE---E--CSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEEC-SSEEEEEE-TTEE
T ss_pred cEEEEEeCCCCcEEEEE---E--cCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeC-CCEEEEec-CCeE
Confidence 99999999988665543 3 36899999999999999999988766654 6777888999999 78999988 8999
Q ss_pred EEECCCCCCC
Q psy10566 585 RIWGPHLNTN 594 (604)
Q Consensus 585 ~iW~~~~~~~ 594 (604)
++||+.+++.
T Consensus 415 ~iwd~~~g~~ 424 (464)
T 3v7d_B 415 NIYNLRSGKL 424 (464)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 9999998763
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=291.42 Aligned_cols=294 Identities=17% Similarity=0.215 Sum_probs=223.9
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCCce
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPEDCH 371 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~~~ 371 (604)
...+.+|.+.|++++|+|++++||+|+.||.|+|||+............+.+|...|.+++|+| ++.+|++++.|+
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-- 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-- 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS--
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC--
Confidence 3567899999999999999999999999999999999855545567888899999999999999 699999999998
Q ss_pred EEEEEECCCc---------eEEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcC-CCeeeeee---------
Q psy10566 372 ELWVWNIETE---------LLRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIE-GQVLDSWE--------- 430 (604)
Q Consensus 372 ~i~vwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~-~~~~~~~~--------- 430 (604)
.|++||+.++ .....+. .|...|.+++|+|+ +.++++++.||.|++||+. ++.+..+.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred eEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 8999999887 4455554 68889999999999 9999999999999999984 33332221
Q ss_pred ------ceeEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCC----CEEEEEecCC
Q psy10566 431 ------GVRVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATD----RLALLNVSTQ 494 (604)
Q Consensus 431 ------~~~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg 494 (604)
...+.++.|+|+ +..+++++.++.+.+|+...... .....|...|.+++|+|++ .++++++.||
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 126899999997 99999999999998888776653 2333578899999999998 8999999999
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE----eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG----SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg----s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.|++||++++........... .......++....++.+ .....+.+|+....+++..+.+|...|++++|+|+
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLT---NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp CEEEEEEEECC------------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred eEEEEeCCCCcCccccCCccc---ceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 999999987655443332222 11112222333333333 34556777777788889999999999999999999
Q ss_pred CCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+.+|++++.||.|++|++.++..
T Consensus 318 -~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 318 -GTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp -SCCEEEEETTSCEEEEEECTTSC
T ss_pred -CCEEEEecCCCcEEEEecCcCcc
Confidence 78999999999999999998754
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=305.52 Aligned_cols=279 Identities=13% Similarity=0.101 Sum_probs=232.3
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
..+++++|+|+|++|++|+.||.|++||+. .......+..| ..+....|+|++++|++++.++ .|++||+.++
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~ 129 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTI----IRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEG--DIKVLDSNFN 129 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECC----SEETTTTSCSC-CEEEEEEECSSSCEEEEEETTS--CEEEECTTSC
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEec----ccceeeEEecC-CceEEEEEecCCCEEEEEECCC--CEEEEeCCCc
Confidence 345579999999999999999999999987 44444455555 4455667899999999999998 8999999998
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
.....+. .|...|++++|+|++++|++|+.|+.|++||+ +++.+..+.+| .|.+++|+|+++.+++++.|+.|++|
T Consensus 130 ~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 130 LQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp EEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 8776654 78899999999999999999999999999999 46777777766 79999999999999999999999999
Q ss_pred EcCCCccccccc----C---------------------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec-
Q psy10566 459 NFEHLTDSNLLQ----E---------------------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG- 512 (604)
Q Consensus 459 d~~~~~~~~~~~----~---------------------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~- 512 (604)
|+++.+....+. + ...+.+++|+|+++++++++.||.|++||+++++.+..+..
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc
Confidence 999876554443 2 24455566689999999999999999999999988777654
Q ss_pred cccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCCcc-eEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 513 VTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRELP-IATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~~~-~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|... +.++.++|++. +|++|+.||.|++||+++++. +..+.+ |...|+++.|. + +.+|++++.||.|++|++
T Consensus 289 ~~~~---v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 289 FTCS---CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-A-GALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TSSC---EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-T-TEEEEEETTTEEEEEEEE
T ss_pred cCCC---ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-C-CCEEEEecCCccEEEEec
Confidence 4443 44455678888 999999999999999998754 777777 67788888665 5 689999999999999999
Q ss_pred CCCC
Q psy10566 590 HLNT 593 (604)
Q Consensus 590 ~~~~ 593 (604)
....
T Consensus 364 ~~~~ 367 (420)
T 3vl1_A 364 SDPE 367 (420)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 8754
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=290.09 Aligned_cols=285 Identities=10% Similarity=0.053 Sum_probs=239.8
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHE 372 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~ 372 (604)
.....+|.+.|++++|+|++++|++|+.||.|+||++...... .....+.+|...|.+++|+|+++ +|++++.++ .
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~ 80 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN-VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG--E 80 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE-EEEEEEEECSSCEEEEEEEESSSEEEEEEETTS--C
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc-ccceeeeecCCceEEEEECCCCCcEEEEEcCCC--e
Confidence 3455689999999999999999999999999999999843322 22345558999999999999999 999999998 8
Q ss_pred EEEEEC-CCceEEEEecCC--CCCCeEEEEEecCCCEEEEEecCCeEEEEEcC----------CCeeeeee-ceeEEEEE
Q psy10566 373 LWVWNI-ETELLRVKLNHS--PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE----------GQVLDSWE-GVRVNCLW 438 (604)
Q Consensus 373 i~vwd~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~----------~~~~~~~~-~~~v~~l~ 438 (604)
|++||+ .++.. ..+. . |...|.+++|+| +..+++++.|+.|++||+. ++.+..+. ...+.+++
T Consensus 81 i~~wd~~~~~~~-~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 157 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALT-NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp EEEECSSSSSSE-EECB-SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred EEEEEeccCCce-Eecc-ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEE
Confidence 999999 88866 3333 5 888999999999 9999999999999999984 33333333 23799999
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCC-Cccc---ccccCCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCC------cee
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEH-LTDS---NLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDR------ILL 507 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~-~~~~---~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~------~~~ 507 (604)
+++++ +++++.++.|++||+++ .... ....+...+.+++|+| +++++++++.||.|++||++.. +..
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 99988 99999999999999988 4432 2334678899999999 9999999999999999999887 777
Q ss_pred eEeecccc------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEeC
Q psy10566 508 RKFQGVTQ------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-TRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 508 ~~~~~~~~------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
..+..|.. ....+.++.++|++++|++|+.||.|++||+.+++++..+.+| ...|++++ |+ +.+|++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~-~~~l~s~s~ 312 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CS-DNILCLATS 312 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--EC-SSEEEEEEE
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CC-CCeEEEEec
Confidence 88887754 1123455666799999999999999999999999999999998 99999999 88 899999999
Q ss_pred CCc-EEEECC
Q psy10566 581 DCT-VRIWGP 589 (604)
Q Consensus 581 Dg~-I~iW~~ 589 (604)
||+ .+.|..
T Consensus 313 Dg~~~~~~~~ 322 (342)
T 1yfq_A 313 DDTFKTNAAI 322 (342)
T ss_dssp CTHHHHCSSS
T ss_pred CCcccccccc
Confidence 999 777764
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=286.60 Aligned_cols=246 Identities=9% Similarity=0.023 Sum_probs=204.1
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
...|...|.+++|+|++ .|++|+.||+|+|||+..+.........+.+|...|++++|+|++++|++++.|+ +|++|
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--~i~iw 154 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--CIKVW 154 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--CEEEE
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--eEEEE
Confidence 34577889999999986 6889999999999999854433444556678999999999999999999999998 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeeee----ceeEEEEEEcCC-CCEEEEE
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSWE----GVRVNCLWCRSD-GKSVLAA 449 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~----~~~v~~l~~s~~-g~~l~~~ 449 (604)
|+.+++++..+. +|...|.+++|+|++. .|++++.|++|++||++ ++....+. +..+.+++|+|+ +++++++
T Consensus 155 d~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 155 DLAQQVVLSSYR-AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp ETTTTEEEEEEC-CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred ECCCCcEEEEEc-CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 999999988886 7889999999999885 78999999999999994 55555443 336899999985 5678899
Q ss_pred eCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 450 DTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+.|+.|++||+++.+....+ .|...|.+++|+|++ ++|++++.|++|++||+.++++. .+.+|...+ .++.|+|
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V---~~v~~sp 309 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFV---RDATWSP 309 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCE---EEEEECS
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCE---EEEEEeC
Confidence 99999999999987765544 578899999999998 57899999999999999998765 567888754 4455678
Q ss_pred CCc-EEEEEeCCCcEEEEeCCCCc
Q psy10566 528 NQD-FVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 528 ~~~-~l~sgs~dg~I~iwd~~~~~ 550 (604)
++. +|++|+.||+|++|++.+..
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCeEEEEEcCCCeEEEEECCCCC
Confidence 775 67899999999999998754
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=288.76 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=236.7
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
|.+.|.+++|+|||++++++..++.+.+|... .........+|...|.+++|+|+++++++++ ++ .|++||+.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg--~i~iw~~~ 80 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIP----RHARQINTLNHGEVVCAVTISNPTRHVYTGG-KG--CVKVWDIS 80 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCC----SEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BS--EEEEEETT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccC----CccccceeccCCCceEEEEEecCCcEEEEcC-CC--eEEEEECC
Confidence 56789999999999999998888877777654 2233344447999999999999999999988 77 89999998
Q ss_pred CceEEEEe----cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---eeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 380 TELLRVKL----NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ---VLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 380 ~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++.....+ ...|...|.+++|+|+++++++++.||.|++||++.. ....+..+ .+.+++|+|+++.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe
Confidence 76532221 1257789999999999999999999999999999643 34444444 699999999999999999
Q ss_pred CCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.++.|++||+++.+....+. +...+.+++|+|+++++++++.|+.|++||+++++.+..+.. ... +..+.++|++
T Consensus 161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~---v~~~~~s~~~ 236 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF-TSQ---IFSLGYCPTG 236 (337)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SSC---EEEEEECTTS
T ss_pred CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC-CCc---eEEEEECCCC
Confidence 99999999999876655544 688999999999999999999999999999999988877653 332 4445667999
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++++.||.|++||+.+++. ..+..|...|.+++|+|+ +.+|++++.||.|++|++.+++
T Consensus 237 ~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp SEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCC-CCEEEEecCCCcEEEEECCCCe
Confidence 9999999999999999998775 467789999999999999 8899999999999999998875
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=308.64 Aligned_cols=289 Identities=17% Similarity=0.265 Sum_probs=237.8
Q ss_pred ccceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC---CeeEEEECCC-CCeEEEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL---GVAYLAWSPD-SSHLLVV 365 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~spd-~~~l~s~ 365 (604)
.+....+.+|.+.|++++|+|+++ +|++++.|+.|++||+. ..+....+.+|.. .|.+++|+|+ +++++++
T Consensus 150 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 150 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP----PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT----TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEE
T ss_pred CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC----CcceeeeecccCCCCceEEEEEECCCCCCEEEEE
Confidence 346778899999999999999998 89999999999999988 6677888999999 9999999999 9999999
Q ss_pred eCCCceEEEEEECCCceEEEEecC---CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece---------
Q psy10566 366 GPEDCHELWVWNIETELLRVKLNH---SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--------- 432 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--------- 432 (604)
+.++ .|++||+.+++....+.. .|...|.+++|+ ++.++++++.|+.|++||+. ++.+..+..+
T Consensus 226 ~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 226 GSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp ETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred eCCC--eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 9998 899999999999888844 788999999999 99999999999999999985 3333222111
Q ss_pred --------------------------------------eEE---------------------------------EEEE--
Q psy10566 433 --------------------------------------RVN---------------------------------CLWC-- 439 (604)
Q Consensus 433 --------------------------------------~v~---------------------------------~l~~-- 439 (604)
.|. ++++
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~ 382 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSK 382 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCS
T ss_pred EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECC
Confidence 111 2222
Q ss_pred --------------------------------cCC--------------------------------------CCEEEEE
Q psy10566 440 --------------------------------RSD--------------------------------------GKSVLAA 449 (604)
Q Consensus 440 --------------------------------s~~--------------------------------------g~~l~~~ 449 (604)
+|+ ++.++++
T Consensus 383 ~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 462 (615)
T 1pgu_A 383 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVG 462 (615)
T ss_dssp TTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEE
T ss_pred CcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEe
Confidence 111 3334444
Q ss_pred eC-CCeEEEEEcCCCcc--cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec-cccceEEEEeeeC
Q psy10566 450 DT-HHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG-VTQGQFTIHSCFG 525 (604)
Q Consensus 450 ~~-dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~-~~~~~~~i~~~~~ 525 (604)
+. ++.|++||+.+... .....+...|.+++|+|+++++++++.|+.|++||+.+++.+..+.+ |...+ ..+.+
T Consensus 463 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v---~~~~~ 539 (615)
T 1pgu_A 463 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI---NAISW 539 (615)
T ss_dssp ETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCE---EEEEE
T ss_pred ecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCce---eEEEE
Confidence 44 55555555554433 33344678899999999999999999999999999999999988887 77654 44566
Q ss_pred CC----------CCcEEEEEeCCCcEEEEeCCCC-cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 526 GA----------NQDFVASGSEDGKVYIWHVKRE-LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 526 ~~----------~~~~l~sgs~dg~I~iwd~~~~-~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+| ++++|++|+.||.|++||+.++ +++..+.+|...|++++|+|+ +. |++++.||+|++|+++.
T Consensus 540 sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~-~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 540 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET-TE-EEEEETTSCEEEEEEC-
T ss_pred cCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCC-CC-eEEecCCceEEEEeeec
Confidence 78 9999999999999999999998 789999999999999999999 67 99999999999999875
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=285.66 Aligned_cols=270 Identities=16% Similarity=0.225 Sum_probs=224.2
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
..+.|....+|+..... .....++..+.+|...|++++|+|+|++|++|+.|++|+|||+. +.+....+.+|...
T Consensus 35 s~s~D~~v~~W~~~~~~-~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~----~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 35 SASRDKTLISWKLTGDD-QKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVA----TGETYQRFVGHKSD 109 (319)
T ss_dssp EEETTSEEEEEEEEEET-TEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EecCCccEEEecCCCCC-ccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECC----CCCeeEEEccCCCc
Confidence 45556777788754321 11234577899999999999999999999999999999999998 55677889999999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC------CCEEEEEecCCeEEEEEcC-
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD------GTKFVCGGIRGQFYQCDIE- 422 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~- 422 (604)
|.+++|+|++.++++++.|+ +|++||+... +...+. +|...|.++.|+|. +..+++++.|+.|++||+.
T Consensus 110 v~~~~~~~~~~~l~s~s~D~--~i~vwd~~~~-~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 185 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDK--TIKVWTIKGQ-CLATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185 (319)
T ss_dssp EEEEEECTTSCEEEEEETTS--CEEEEETTSC-EEEEEC-CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEeCCC--eEEEEECCCC-eEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc
Confidence 99999999999999999999 8999999754 444444 68889999999984 4589999999999999995
Q ss_pred CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEe
Q psy10566 423 GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 423 ~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd 500 (604)
++....+.+| .|.+++|+|+++++++++.|+.|++||+.+.+....+....++.+++|+|++.++++++. +.+++|+
T Consensus 186 ~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~-~~i~v~~ 264 (319)
T 3frx_A 186 FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA-TGIKVFS 264 (319)
T ss_dssp TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET-TEEEEEE
T ss_pred chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC-CCcEEEE
Confidence 4556666665 799999999999999999999999999999887777777889999999999999988775 4599999
Q ss_pred cCCCceeeEeecccc-----ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 501 LRDRILLRKFQGVTQ-----GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 501 ~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
+..+..+..+..+.. ....+.++.++|+|++|++|+.||.|+|||+.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 265 LDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred eCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 998777666543211 1123445677899999999999999999998764
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-34 Score=336.09 Aligned_cols=288 Identities=19% Similarity=0.305 Sum_probs=254.7
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.....+.+|.+.|++++|+|+|++||+|+.||+|+|||+. +...+..+.+|...|.+++|+|+++++++++.|+
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~-- 679 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAE----TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADK-- 679 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECC----CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCC--
Confidence 3445788999999999999999999999999999999998 5567788999999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSV 446 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l 446 (604)
+|++||+.+++.+..+. .|...|.+++|+| ++..+++|+.||.|++||+ .++.+..+.+| .|.+++|+|+++.+
T Consensus 680 ~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eEEEEECCCCceEEEEc-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEE
Confidence 89999999999888886 6888999999999 5568999999999999999 46777777666 69999999999999
Q ss_pred EEEeCCCeEEEEEcCCCccccccc--------------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQ--------------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ- 511 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~--------------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~- 511 (604)
++++.||.|++||+.+......+. ....+.+++|+|++..+++++ ++.+.+||+.++..+..+.
T Consensus 759 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~ 837 (1249)
T 3sfz_A 759 ASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHT 837 (1249)
T ss_dssp EEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEEC
T ss_pred EEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcC
Confidence 999999999999998765433222 133688999999999999887 6899999999998887776
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+|... +.++.++|+++++++|+.||.|++||+.++..+..+.+|.+.|++++|+|+ +..|++++.||.|++|++..
T Consensus 838 ~~~~~---v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd-g~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 838 GHHST---IQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPD-GSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp SSSSC---CCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEHHH
T ss_pred CCCCc---eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCC-CCEEEEEeCCCeEEEEEccc
Confidence 55554 344566799999999999999999999999999999999999999999999 88999999999999999754
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=288.41 Aligned_cols=264 Identities=19% Similarity=0.247 Sum_probs=199.4
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCCceE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPEDCHE 372 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~~~~ 372 (604)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+. .........+.+|...|.+++|+| ++++|++++.|+ +
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~--~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~--~ 82 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR--NGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR--K 82 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEE--TTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS--C
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEec--CCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC--E
Confidence 3567999999999999999999999999999999997 333445778999999999999986 489999999998 8
Q ss_pred EEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-e---eeeeece--eEEEEEEcCC
Q psy10566 373 LWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ-V---LDSWEGV--RVNCLWCRSD 442 (604)
Q Consensus 373 i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~---~~~~~~~--~v~~l~~s~~ 442 (604)
|++||+.++. ....+ .+|...|.+++|+|+ +.+|++|+.|+.|++||+... . ...+.+| .+.+++|+|+
T Consensus 83 v~iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp EEEECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEECCCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 9999999874 34444 368889999999997 789999999999999998643 1 1222222 4666677765
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC---ceeeEeeccccceEE
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR---ILLRKFQGVTQGQFT 519 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~---~~~~~~~~~~~~~~~ 519 (604)
+.. +.+ .+... . ....++.++++++.|+.|++||++.. ..+..+.+|...
T Consensus 162 ~~~-------~~~--~~~~~----------~-----~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~--- 214 (316)
T 3bg1_A 162 VVP-------GSL--IDHPS----------G-----QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW--- 214 (316)
T ss_dssp CCC---------------CC----------S-----CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC---
T ss_pred cCC-------ccc--ccccc----------c-----cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc---
Confidence 320 000 00000 0 01123578999999999999999765 456777888775
Q ss_pred EEeeeCCCCC----cEEEEEeCCCcEEEEeCCCC---c-ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 520 IHSCFGGANQ----DFVASGSEDGKVYIWHVKRE---L-PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 520 i~~~~~~~~~----~~l~sgs~dg~I~iwd~~~~---~-~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+..+.++|++ .+|++|+.||+|+|||+.+. . ....+..|...|.+++|+|+ +.+||+++.||+|++|+...
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~-g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTT-TCCEEEEESSSCEEEEEECT
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEECC
Confidence 4445667875 89999999999999998763 1 23456678999999999999 88999999999999999764
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=285.80 Aligned_cols=270 Identities=17% Similarity=0.228 Sum_probs=219.9
Q ss_pred ccccCccccccccCcCcC-CCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC
Q psy10566 270 DESLENVSLLVDHLCTKE-EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL 348 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~-~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~ 348 (604)
..+.|....+|+...... .....+...+.+|.+.|++++|+|++.+|++|+.|++|+|||+. +......+.+|..
T Consensus 44 sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~----~~~~~~~~~~h~~ 119 (343)
T 2xzm_R 44 SGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR----TGTTYKRFVGHQS 119 (343)
T ss_dssp EEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT----SSCEEEEEECCCS
T ss_pred EEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC----CCcEEEEEcCCCC
Confidence 455577788888643221 12234567899999999999999999999999999999999998 5566788999999
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEe-cCCCCCCeEEEEEecCC----------CEEEEEecCCeEE
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKL-NHSPEDSLTSCSWNRDG----------TKFVCGGIRGQFY 417 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~----------~~l~s~~~dg~i~ 417 (604)
.|.+++|+|++++|++++.|+ +|++||+......... ...|...|.+++|+|++ .++++++.||.|+
T Consensus 120 ~v~~v~~sp~~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 120 EVYSVAFSPDNRQILSAGAER--EIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTS--CEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred cEEEEEECCCCCEEEEEcCCC--EEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 999999999999999999998 8999999854333222 12577889999999987 7899999999999
Q ss_pred EEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CcccccccCCCCeeEEEECCCCCEEEEEecCC
Q psy10566 418 QCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 418 iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 494 (604)
+||..++....+.+| .|.+++|+|+|+++++++.|+.|++||+.. ......+.+...|.+++|+|++.+++++ .|+
T Consensus 198 iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~ 276 (343)
T 2xzm_R 198 VWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQ 276 (343)
T ss_dssp EEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESS
T ss_pred EEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCC
Confidence 999877777777666 699999999999999999999999999954 3344444466789999999999877655 677
Q ss_pred eEEEEecCCCceee--Eee-----------ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 495 GVHLWDLRDRILLR--KFQ-----------GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 495 ~I~lwd~~~~~~~~--~~~-----------~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
.|++||+.+++... .+. +|.. .+.++.++|+|++|++|+.||.|++|++.++
T Consensus 277 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 277 GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP---QCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCC---CEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCC---ceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 89999998876544 333 3333 3555677899999999999999999998764
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-35 Score=309.47 Aligned_cols=314 Identities=11% Similarity=0.095 Sum_probs=226.1
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC------CCeEEEEECCCeEEEEEeCCCCce-------e
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD------GLKLATGSKDTTVIIWDVDPVTFT-------C 337 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd------g~~lasgs~dg~i~iwd~~~~~~~-------~ 337 (604)
.+.+....+|+..... .......++.+|.+.|++++|+|+ +.+||+|+.||+|+|||+...... .
T Consensus 179 ~s~D~tI~iWd~~~~~--~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 179 EKHSSCIQIFKMNTST--LHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp ---CEEEEEEEEETTT--CCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred CCCCceEEEEEccCCC--CCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence 3445666788753321 112223567789999999999997 579999999999999999733211 1
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEE--EEecCC-CEEEEEecCC
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSC--SWNRDG-TKFVCGGIRG 414 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~s~~~dg 414 (604)
.....+.+|...|++++|+|++ .|++|+.|+ +|++||+.++.........|...|.++ +|+|++ .+|++|+.|+
T Consensus 257 ~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg--tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~ 333 (524)
T 2j04_B 257 KPSLTLSLADSLITTFDFLSPT-TVVCGFKNG--FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG 333 (524)
T ss_dssp SCSEEECCTTTCEEEEEESSSS-EEEEEETTS--EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS
T ss_pred CceEEEEcCCCCEEEEEecCCC-eEEEEeCCC--EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC
Confidence 1235788899999999999865 899999998 999999997743322223688999999 578887 8999999999
Q ss_pred eEEEEEcC-CCeeeeeece----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-ccccCCCCeeEEEECCCCCEEE
Q psy10566 415 QFYQCDIE-GQVLDSWEGV----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-NLLQEDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 415 ~i~iwd~~-~~~~~~~~~~----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~ 488 (604)
+|++||++ ++.+..+.++ .+.+++|+|++..+++++.|++|++||+++.... .+..|...|.+++|+|++.+++
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEE
Confidence 99999994 4444444433 3788999999999999999999999999987653 3556889999999999999999
Q ss_pred EEecCCeEEEEecCCCceeeEeeccc--cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCCCCCeeEE
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQGVT--QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCV 565 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h~~~V~~v 565 (604)
+|+.|++|++||+..+ ....+.... .....+..+.++|+++.+ ....+ +.+|+.. ++..+.++.+|...|++|
T Consensus 414 Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~-~~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~V 489 (524)
T 2j04_B 414 AGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKY-RIDSS--YEVYPLTVNDVSKAKIDAHGINITCT 489 (524)
T ss_dssp EEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEE-EECCC--CCCCC-------------CCCSCCCE
T ss_pred EEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeE-EccCC--ceecccccCCcceeeecCCCceEEEE
Confidence 9999999999998654 322221111 111134456677888855 23222 3344443 577888999999999999
Q ss_pred EEcCCC--CcEEEEEeCCCcEEEECCCCCC
Q psy10566 566 AWNPVY--HQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 566 ~~sp~~--~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|+|++ +..+|+|+.||+|+||++....
T Consensus 490 afsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 490 KWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp EECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred ECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 999994 3499999999999999987654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=307.15 Aligned_cols=287 Identities=15% Similarity=0.193 Sum_probs=245.7
Q ss_pred cceeecccCCCc-EEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCc------eeEeeEEeccCCCCeeEEEECCCCCeE
Q psy10566 292 ETTQVLNDHCDE-VWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTF------TCQHRKTLEGHTLGVAYLAWSPDSSHL 362 (604)
Q Consensus 292 ~~~~~l~~H~~~-V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~------~~~~~~~l~~h~~~V~~l~~spd~~~l 362 (604)
+....+.+|.+. |++++|+| ++++||+|+.||+|+|||+. ++ .......+..|..+|.+++|+|+++++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 131 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT--FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 131 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE--EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC--CCcccccccccccchhhcccccEEEEEEeCCCCEE
Confidence 678889999999 99999999 99999999999999999996 22 346778888999999999999999999
Q ss_pred EEEeCCCc--eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeeeece-----e
Q psy10566 363 LVVGPEDC--HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSWEGV-----R 433 (604)
Q Consensus 363 ~s~~~d~~--~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~~~-----~ 433 (604)
++++.+.. +.|++|| ++.....+. .|...|.+++|+|++. .+++++.|+.|++||+. ++.+..+.++ .
T Consensus 132 ~~~~~~~~~~~~v~~~d--~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 132 CVVGEGRDNFGVFISWD--SGNSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 208 (615)
T ss_dssp EEEECCSSCSEEEEETT--TCCEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred EEeccCCCCccEEEEEE--CCCcceeee-cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCce
Confidence 99998731 3788888 555666665 7888999999999998 89999999999999995 5666666554 6
Q ss_pred EEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccc-----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 434 VNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLL-----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 434 v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
|.+++|+|+ ++.+++++.|+.|++||+.+.+....+ .+...|.+++|+ ++.++++++.|+.|++||+++++.+
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 999999999 999999999999999999988777666 788999999999 9999999999999999999999999
Q ss_pred eEeeccccc-eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 508 RKFQGVTQG-QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 508 ~~~~~~~~~-~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
..+..+... ...+..+.+ ++++++++|+.||.|++||+.+++++..+.+|...|++++| |+ +++++.||.|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~ 361 (615)
T 1pgu_A 288 QKWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP----LISGSYDGRIME 361 (615)
T ss_dssp EEEECCTTCGGGCEEEEEE-EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT----TEEEETTSCEEE
T ss_pred EEEcCCCCcccCceeEEEe-CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC----cEEECCCCeEEE
Confidence 888876211 112222333 38899999999999999999999999999999999999999 75 777888888888
Q ss_pred ECCC
Q psy10566 587 WGPH 590 (604)
Q Consensus 587 W~~~ 590 (604)
|++.
T Consensus 362 w~~~ 365 (615)
T 1pgu_A 362 WSSS 365 (615)
T ss_dssp TTTT
T ss_pred EEch
Confidence 8765
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=293.92 Aligned_cols=275 Identities=23% Similarity=0.342 Sum_probs=232.8
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
....+|...|+|++| ++++|++|+.||+|++||+. +.+....+.+|...|.+++| +++++++++.|+ +|+
T Consensus 127 ~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg--~i~ 196 (435)
T 1p22_A 127 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN----TLECKRILTGHTGSVLCLQY--DERVIITGSSDS--TVR 196 (435)
T ss_dssp ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESS----SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS--CEE
T ss_pred ecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCC----CCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCC--eEE
Confidence 344567888999887 78999999999999999998 56677889999999999999 788999999998 899
Q ss_pred EEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCee---eeeece--eEEEEEEcCCCCEEEE
Q psy10566 375 VWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVL---DSWEGV--RVNCLWCRSDGKSVLA 448 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~---~~~~~~--~v~~l~~s~~g~~l~~ 448 (604)
+||+.+++....+. .|...|.+++|+ +..+++|+.||.|++||+. +... ....++ .|.++.+ +++.+++
T Consensus 197 vwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s 271 (435)
T 1p22_A 197 VWDVNTGEMLNTLI-HHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVS 271 (435)
T ss_dssp EEESSSCCEEEEEC-CCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred EEECCCCcEEEEEc-CCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEE
Confidence 99999999888876 688899999997 4599999999999999995 3332 344444 6888888 7899999
Q ss_pred EeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
++.||.|++||+++......+. +...+.++.+ ++.++++++.||.|++||+++++.+..+.+|...+..+ .+
T Consensus 272 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~---~~-- 344 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RF-- 344 (435)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE---EC--
T ss_pred EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE---Ee--
Confidence 9999999999999877655444 6788999988 57899999999999999999999999999988865554 33
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCc---------ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKREL---------PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~---------~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
++.++++|+.||.|++||+.++. ++..+.+|.+.|++++| + +.+|++++.||+|++||+.+...
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~-~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--D-EFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--C-SSCEEECCSSSEEEEEC------
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--C-CCEEEEEeCCCEEEEEECCCCCC
Confidence 78899999999999999997665 78899999999999999 4 67899999999999999987653
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=289.49 Aligned_cols=276 Identities=25% Similarity=0.394 Sum_probs=240.3
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.+.+.+|.+.|.. +++++|++|++|+.||+|++||+. +.+....+.+|...|.+++|+ ++.+++++.|+ +|
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg--~i 181 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAV----TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDR--TL 181 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETT----TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTS--CE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECC----CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCC--eE
Confidence 4578899987643 355568999999999999999998 556788899999999999998 56999999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++||+.+++....+. .|...|.+++|+ ++.+++|+.||.|++||+. ++.+..+.++ .+.++.+ +++.+++++
T Consensus 182 ~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 182 KVWNAETGECIHTLY-GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp EEEETTTTEEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred EEEECCcCcEEEEEC-CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 999999999888876 788899999995 5789999999999999994 7777777765 6888888 789999999
Q ss_pred CCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.|+.|++||+++......+ .+...+.++.+ ++.++++++.|+.|++||+++++.+..+.+|......+. +++
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~-----~~~ 329 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-----LKD 329 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-----EET
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE-----EeC
Confidence 9999999999887665544 46788999999 789999999999999999999999999998887554442 357
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSG---HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++|+.||.|++||+.+++++..+.+ |...|++++|+ +.+|++|+.||.|++||+.+++
T Consensus 330 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 330 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCc
Confidence 7999999999999999999999999987 88899999996 4689999999999999999876
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=284.45 Aligned_cols=264 Identities=16% Similarity=0.284 Sum_probs=226.4
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC--ceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT--FTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~--~~~~~~~~l~~h~ 347 (604)
+.+.|....+||.. +.+..+.+..|...|.+++|+|+|.+||+|+.|+.+++|++.... ........+.+|.
T Consensus 81 s~s~Dg~v~vWd~~------~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~ 154 (354)
T 2pbi_B 81 SSSQDGKVIVWDSF------TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT 154 (354)
T ss_dssp EEETTSEEEEEETT------TCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS
T ss_pred EEeCCCeEEEEECC------CCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC
Confidence 44556677778743 345567788899999999999999999999999999999986321 1123456677899
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEc-CCC
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDI-EGQ 424 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~-~~~ 424 (604)
..|.+++|+|++..|++++.|+ +|++||+++++.+..+. +|...|.+++|+| +++.|++|+.||.|++||+ .++
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~--~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDG--TCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTS--EEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEEeCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999999998 89999999999888776 6888999999988 5789999999999999999 577
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
.+..+.+| .|.+++|+|++..+++++.|++|++||++.......+.. ...+.+++|+|++.++++++.|+.|++|
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence 77777766 699999999999999999999999999988765444432 3478999999999999999999999999
Q ss_pred ecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
|+.+++.+..+.+|...+ .++.++|++++|++|+.||+|+||+
T Consensus 312 d~~~~~~~~~l~~h~~~v---~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 312 DVLKGSRVSILFGHENRV---STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTTCSEEEEECCCSSCE---EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCceEEEEECCCCcE---EEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999998854 4456679999999999999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=281.84 Aligned_cols=274 Identities=17% Similarity=0.226 Sum_probs=212.0
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCe
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V 350 (604)
.+.|....+|+..... .........+|.+.|++++|+|+|++||+|+.|++|+||++. .........+.+|...|
T Consensus 34 ~~~D~~i~iw~~~~~~---~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~--~~~~~~~~~~~~h~~~v 108 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDS---WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN--QDDFECVTTLEGHENEV 108 (345)
T ss_dssp EETTSCEEEEEEETTE---EEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC--CC-EEEEEEECCCSSCE
T ss_pred EcCCCeEEEEEcCCCc---ceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc--CCCeEEEEEccCCCCCc
Confidence 4446667777643221 001122347899999999999999999999999999999997 33456678899999999
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCce---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ--- 424 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--- 424 (604)
.+++|+|++++|++++.|+ +|++||+.++. +...+ ..|...|.+++|+|++.+|++|+.|+.|++||....
T Consensus 109 ~~v~~sp~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 109 KSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp EEEEECTTSSEEEEEETTS--CEEEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred eEEEEeCCCCEEEEEECCC--eEEEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 9999999999999999998 89999998764 23333 478889999999999999999999999999999543
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc----------------cc-cCCCCeeEEEECCCCC
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN----------------LL-QEDHPVMSFTIDATDR 485 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~----------------~~-~~~~~i~~~~~s~~~~ 485 (604)
....+.+| .|.+++|+|+|++|++++.|++|++||........ .. .+...|.+++|+|++.
T Consensus 186 ~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~ 265 (345)
T 3fm0_A 186 CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG 265 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC
T ss_pred EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC
Confidence 33455555 79999999999999999999999999974321110 11 1567899999999999
Q ss_pred EEEEEecCCeEEEEecCCCce----e-----eEeeccccceEEEEeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 486 LALLNVSTQGVHLWDLRDRIL----L-----RKFQGVTQGQFTIHSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~----~-----~~~~~~~~~~~~i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
.+++++.|+.|++|+...+.. . ....+|... +.++.++|++ .+|++|+.||+|++|++.+++....+
T Consensus 266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~---V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD---VNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC---EEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc---EeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 999999999999999876431 1 122355554 4555667877 59999999999999999988765544
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=288.30 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=208.7
Q ss_pred cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC-----------------CCCCeEEEEEecCCCEE
Q psy10566 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS-----------------PEDSLTSCSWNRDGTKF 407 (604)
Q Consensus 345 ~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l 407 (604)
+|...|.+++|+|+|++|++++ ++ .+++|++.++.....+... +...|.+++|+|++++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~--~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NK--TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BS--CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CC--cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 5999999999999999999876 44 6999999999887766522 12248999999999999
Q ss_pred EEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-C
Q psy10566 408 VCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-T 483 (604)
Q Consensus 408 ~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-~ 483 (604)
++|+.|+.|++||+. ++.+..+.+| .|.+++|+|+++.+++++.|+.|++||+++......+.+...+.+++++| +
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 218 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC
Confidence 999999999999995 5666777766 69999999999999999999999999999988777777788899999999 8
Q ss_pred CCEEEEEecCCeEEEEecCCCceeeEe-------eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC--------
Q psy10566 484 DRLALLNVSTQGVHLWDLRDRILLRKF-------QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-------- 548 (604)
Q Consensus 484 ~~~l~~~~~dg~I~lwd~~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-------- 548 (604)
++++++++.|+.|++||++++..+..+ .+|... +.++.++|++++|++|+.||.|++||+.+
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~---v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS---VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC---EEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC---EEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 999999999999999999999887776 345553 44556679999999999999999999975
Q ss_pred ----CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 549 ----ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 549 ----~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+...+.+|...|.+++|+|+ +.+|++|+.||.|++||+.++.
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCcceEEEecccCcEEEEEECCC-CCEEEEEeCCCeEEEEECCCCe
Confidence 3445678899999999999999 7899999999999999998875
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=289.42 Aligned_cols=278 Identities=15% Similarity=0.202 Sum_probs=197.0
Q ss_pred EEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC----ceEEEEEECCC
Q psy10566 305 WFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED----CHELWVWNIET 380 (604)
Q Consensus 305 ~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~----~~~i~vwd~~~ 380 (604)
..+.+.+++.++.+. .+.....|++.. ....+|...|++++|+|||++|++++.+. .+.|++|+..+
T Consensus 9 sg~d~g~~~~~~~~~-g~~~~~~w~~p~--------~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~ 79 (357)
T 4g56_B 9 SGVDLGTENLYFQSN-GSSKGSAWGRPV--------TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPE 79 (357)
T ss_dssp ----------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC
T ss_pred cCCCCCccceEEecC-CCccccccCCCC--------CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCC
Confidence 345666666665544 467789999861 22346999999999999999999999743 24899999877
Q ss_pred ceEEEEec---CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeee----eeece--eEEEEEEcCCCCEEEEEe
Q psy10566 381 ELLRVKLN---HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLD----SWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 381 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~----~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
+.....+. ..|...|.+++|+|++. +++++.||+|++||+. ++... ...+| .|.+++|+|+++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs 158 (357)
T 4g56_B 80 GAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG 158 (357)
T ss_dssp ---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe
Confidence 65432221 24677899999999975 5667889999999994 33221 12233 699999999999999999
Q ss_pred CCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
.|+.|++||+.+......+ .|...|.+++|++++. .+++++.|+.|++||+++++....+..+.... .+.++.++|+
T Consensus 159 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~-~v~~v~~sp~ 237 (357)
T 4g56_B 159 KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT-IPTSVTWHPE 237 (357)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS-CEEEEEECTT
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc-cccchhhhhc
Confidence 9999999999988765554 4788999999999885 78899999999999999988877665433322 2333444565
Q ss_pred -CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 529 -QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 529 -~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|++|+.|+.|++||+++++++..+.+|...|++++|+|++..+||+|+.||+|+|||+++++
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 67899999999999999999999999999999999999999966889999999999999998765
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=288.16 Aligned_cols=293 Identities=22% Similarity=0.321 Sum_probs=248.1
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
+....+|+.. ..+.+..+.+|.+.|++++|+ +.+|++|+.||+|++||+. +.+....+.+|...|.++
T Consensus 138 dg~i~vwd~~------~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 138 DNTLKVWSAV------TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE----TGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp TSCEEEEETT------TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEE
T ss_pred CCcEEEEECC------CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC----cCcEEEEECCCCCcEEEE
Confidence 4455555543 346778899999999999998 5699999999999999998 556778899999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV 432 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~ 432 (604)
+|+ ++.+++++.|+ .|++||+.+++....+. .|...|.+++| ++..+++|+.||.|++||+ .++.+..+.++
T Consensus 206 ~~~--~~~l~s~s~dg--~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 278 (445)
T 2ovr_B 206 HLH--EKRVVSGSRDA--TLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 278 (445)
T ss_dssp EEE--TTEEEEEETTS--EEEEEESSSCCEEEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCC
T ss_pred Eec--CCEEEEEeCCC--EEEEEECCCCcEEEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCC
Confidence 995 56899999998 89999999999887776 67889999999 7899999999999999999 46777777665
Q ss_pred --eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 433 --RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 433 --~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
.+.++.+ ++..+++++.|+.|++||+++.+....+ .+...+.++.+ +++++++++.||.|++||+++++.+..
T Consensus 279 ~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~ 354 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQT 354 (445)
T ss_dssp SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 6888888 8899999999999999999987765544 45677777776 567999999999999999999999999
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe-----eCCCCCeeEEEEcCCCCcEEEEEeCCCc-
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL-----SGHTRTVSCVAWNPVYHQMIASVSDDCT- 583 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l-----~~h~~~V~~v~~sp~~~~~l~s~s~Dg~- 583 (604)
+.++......+.++.+ +++++++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+ +.++++|+.||+
T Consensus 355 ~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~dg~~ 431 (445)
T 2ovr_B 355 LQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSRNGTE 431 (445)
T ss_dssp ECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS-EEEEEEECSSSSS
T ss_pred EccCCCCCCCEEEEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCC-EEEEEEcccCCCC
Confidence 9873322223444443 4689999999999999999999999888 468899999999999 899999999998
Q ss_pred ---EEEECCCCC
Q psy10566 584 ---VRIWGPHLN 592 (604)
Q Consensus 584 ---I~iW~~~~~ 592 (604)
|.|||++..
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 999999764
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=274.25 Aligned_cols=252 Identities=16% Similarity=0.278 Sum_probs=219.0
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeE
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 416 (604)
......+.+|...|++++|+|++++|++++.|+ .|++|+..+++....+. .|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg--~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK--LIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCC--eEEEEeCCCcccchhhc-cCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 455678899999999999999999999999998 89999999998877775 788899999999999999999999999
Q ss_pred EEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEec
Q psy10566 417 YQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 417 ~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
++||+ +++.+..+.++ .|.++.|+|+++.+++++.|+.|++||+++.+....+ .+..++.+++|+|++.++++++.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999 46777777766 6999999999999999999999999999987655444 46789999999999999999999
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee--EEEEcCC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS--CVAWNPV 570 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~--~v~~sp~ 570 (604)
|+.|++||+++++.+..+...... .+..+.++|+++++++++.||.|++||+.+++++..+.+|...+. ...+++.
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCC--CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred CCcEEEEECCCCceeeEEeccCCC--ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 999999999999888776543322 344466789999999999999999999999999999999876543 3345544
Q ss_pred CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++.+|++|+.||.|++||+.+++
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCC
T ss_pred CCcEEEEECCCCEEEEEECCCch
Confidence 48899999999999999998775
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-33 Score=327.96 Aligned_cols=295 Identities=19% Similarity=0.265 Sum_probs=249.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d 368 (604)
.+.+..+.+|.+.|.+++|+|+|++||+|+.||+|+|||+. +.+.+..+.+|...|.+++|+| ++..+++++.|
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d 722 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA----TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSND 722 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETT
T ss_pred CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC----CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCC
Confidence 46778899999999999999999999999999999999998 5567888999999999999999 45588899999
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeee-----------------
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWE----------------- 430 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~----------------- 430 (604)
+ .|++||+.++.+...+. +|...|.+++|+|+++.+++++.||.|++||+. ++....+.
T Consensus 723 ~--~v~vwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1249)
T 3sfz_A 723 F--FLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799 (1249)
T ss_dssp S--CEEEEETTSSSEEEEEC-CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred C--eEEEEECCCcchhheec-CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence 8 89999999999888776 788999999999999999999999999999984 22211110
Q ss_pred --------------------------------------c--eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-c
Q psy10566 431 --------------------------------------G--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-L 469 (604)
Q Consensus 431 --------------------------------------~--~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~ 469 (604)
+ ..+.+++|+|+++.+++++.++.|++||+.+...... .
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 879 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR 879 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC
Confidence 1 2577899999999999999999999999998765444 3
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee-----------------------------eEeecccc-----
Q psy10566 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL-----------------------------RKFQGVTQ----- 515 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~-----------------------------~~~~~~~~----- 515 (604)
.|...|.+++|+|++.++++++.|+.|++||+.+.... ....+...
T Consensus 880 ~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1249)
T 3sfz_A 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYL 959 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEE
T ss_pred CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEc
Confidence 57889999999999999999999999999997642110 00001100
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
....+.++.++|+++++++|+.||.|++||+.+++.+..+.+|...|++++|+|+ +.+|++++.||.|++|++.++.
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD-GKTLISSSEDSVIQVWNWQTGD 1036 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSS-SSCEEEECSSSBEEEEETTTTE
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCc
Confidence 0112455677899999999999999999999999999999999999999999999 8899999999999999998764
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=290.02 Aligned_cols=251 Identities=17% Similarity=0.310 Sum_probs=215.7
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
...+..++.+|.+.|++++|+|++++|++++.|+ +|++||+.++.....+. .|...|.+++|+|+++++++|+.|+.
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~--~v~iWd~~~~~~~~~~~-~h~~~v~~~~~s~~g~~las~~~d~~ 131 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDG--RLIVWNALTSQKTHAIK-LHCPWVMECAFAPNGQSVACGGLDSA 131 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTS--EEEEEETTTTEEEEEEE-CCCTTCCCCEECTTSSEEEECCSSSC
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCccceEEe-cCCCCEEEEEECCCCCEEEEeeCCCc
Confidence 4556788999999999999999999999999999 89999999999888776 67888999999999999999999999
Q ss_pred EEEEEcCCC--------eeeeeece--eEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccc------cCCCCeeEE
Q psy10566 416 FYQCDIEGQ--------VLDSWEGV--RVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPVMSF 478 (604)
Q Consensus 416 i~iwd~~~~--------~~~~~~~~--~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i~~~ 478 (604)
+++||+... ....+.+| .+.++.|.|+ +..+++++.|++|++||+.++.....+ .|...+.++
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 211 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL 211 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence 999998431 22334454 5788888886 457999999999999999987655433 467789999
Q ss_pred EECC-CCCEEEEEecCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 479 TIDA-TDRLALLNVSTQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 479 ~~s~-~~~~l~~~~~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
++++ ++.++++|+.|+.|++||++ .+..+..+.+|...+.. +.++|++++|++|+.||+|++||+++++.+..+.
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~---v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINS---VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCE---EEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEE---EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9977 88999999999999999998 45788889999886554 4557999999999999999999999999988886
Q ss_pred CCC-------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 557 GHT-------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 557 ~h~-------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+. ..|++++|+|+ +.+|++|+.||.|++||+..++
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTCC
T ss_pred ccccccccccCceEEEEECCC-CCEEEEEECCCCEEEEECCCCc
Confidence 553 24899999999 8999999999999999987654
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=275.36 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=204.8
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc--eEEEEecCC-CCCCeEEEEEecCCCEEEEEecC
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHS-PEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~--~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
.+.+..+.+|..+|.+++|+|+ +|++++.|+ +|++||+.++ .....+... |...|.+++|+|++++|++|+.|
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~--~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDR--KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSS--CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCC--EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 4567888999999999999998 999999998 8999999875 344445333 88999999999999999999999
Q ss_pred CeEEEEEcCC--------Ceeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-c---c-cccccCCCCeeEE
Q psy10566 414 GQFYQCDIEG--------QVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL-T---D-SNLLQEDHPVMSF 478 (604)
Q Consensus 414 g~i~iwd~~~--------~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~-~---~-~~~~~~~~~i~~~ 478 (604)
+.|++||++. +.+..+.+| .|.+++|+|+++++++++.|++|++||+... . . ..+..|...|.++
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 9999999842 344556565 6999999999999999999999999999532 1 1 2234578899999
Q ss_pred EECCCCCEEEEEecCCeEEEEecCCC--ceeeEeeccccceEEEEeeeCCCC--CcEEEEEeCCCcEEEEeCCCC-----
Q psy10566 479 TIDATDRLALLNVSTQGVHLWDLRDR--ILLRKFQGVTQGQFTIHSCFGGAN--QDFVASGSEDGKVYIWHVKRE----- 549 (604)
Q Consensus 479 ~~s~~~~~l~~~~~dg~I~lwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~sgs~dg~I~iwd~~~~----- 549 (604)
+|+|++.+|++++.|++|++||..++ +++..+.+|...+..+ .++|+ +.+|++|+.|++|++||+..+
T Consensus 160 ~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~---~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 160 IWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSS---DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE---EECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEE---EecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 99999999999999999999999876 6778888998865544 44576 678999999999999998764
Q ss_pred ---cceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 550 ---LPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 550 ---~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+...+.+ |...|.+++|+++ .+|++++.||+|++|+..++
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEETT
T ss_pred ceeEEeeecccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCCC
Confidence 34555655 8999999999975 48999999999999998764
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=313.07 Aligned_cols=303 Identities=9% Similarity=0.103 Sum_probs=233.0
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee---------E
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR---------K 341 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~---------~ 341 (604)
.+.+....+||... .+++..+. |.+.|++++|+|++++|++|+.||+|++||+.. ...... .
T Consensus 75 ~s~D~~v~lWd~~~------~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~--~~~~~~~i~~~~~~~~ 145 (902)
T 2oaj_A 75 INAKDTVYVLSLYS------QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR--DQLSSFKLDNLQKSSF 145 (902)
T ss_dssp EETTCEEEEEETTT------CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTT--TEEEEEEECCHHHHHT
T ss_pred EECcCeEEEEECCC------CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCC--Cccccceecccccccc
Confidence 34466677787543 24455664 778999999999999999999999999999983 222111 2
Q ss_pred EeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEecCC-----------------CCCCeEEEEEecC
Q psy10566 342 TLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKLNHS-----------------PEDSLTSCSWNRD 403 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~ 403 (604)
.+.+|..+|.+++|+|++ ..+++++.|+ .| +||+.+++....+... |...|.+++|+|+
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 346799999999999964 6788888887 89 9999999888776522 2467999999999
Q ss_pred CCEEEEEecCCeEEEEEcC-CCeeee--e-----e-------------ceeEEEE-------------------------
Q psy10566 404 GTKFVCGGIRGQFYQCDIE-GQVLDS--W-----E-------------GVRVNCL------------------------- 437 (604)
Q Consensus 404 ~~~l~s~~~dg~i~iwd~~-~~~~~~--~-----~-------------~~~v~~l------------------------- 437 (604)
|.+|++|+.||.|++||+. ++.+.. + + ...|.++
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 9999999999999999983 332210 0 0 0001000
Q ss_pred --------------------------------------------------------------------------------
Q psy10566 438 -------------------------------------------------------------------------------- 437 (604)
Q Consensus 438 -------------------------------------------------------------------------------- 437 (604)
T Consensus 303 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~ 382 (902)
T 2oaj_A 303 QSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYP 382 (902)
T ss_dssp CCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETT
T ss_pred ceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECC
Confidence
Q ss_pred -----------------------------------------------------------EEcCCCCEEEEEeCCCeEEEE
Q psy10566 438 -----------------------------------------------------------WCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 438 -----------------------------------------------------------~~s~~g~~l~~~~~dg~I~i~ 458 (604)
+|+|+++.+++++.|++|++|
T Consensus 383 ~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlW 462 (902)
T 2oaj_A 383 SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIY 462 (902)
T ss_dssp TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEE
T ss_pred CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEE
Confidence 113456678888888889999
Q ss_pred EcCCCcccc--c----------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc---------------------
Q psy10566 459 NFEHLTDSN--L----------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI--------------------- 505 (604)
Q Consensus 459 d~~~~~~~~--~----------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~--------------------- 505 (604)
|+.++.... . ..|...|.+++|+|++++|++|+.||+|++||+.+++
T Consensus 463 d~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (902)
T 2oaj_A 463 DASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFS 542 (902)
T ss_dssp ESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCC
T ss_pred ECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeecc
Confidence 987764321 0 1466789999999999999999999999999998662
Q ss_pred ------------------------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE-----Eee
Q psy10566 506 ------------------------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA-----TLS 556 (604)
Q Consensus 506 ------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~-----~l~ 556 (604)
++..+.+|...+. ++.++|+| +||+|+.|++|++||++++..+. .+.
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~---svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~ 618 (902)
T 2oaj_A 543 LNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTS---AINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREIS 618 (902)
T ss_dssp GGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEE---EEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTC
T ss_pred ccCCccccccccccCCCCCCCccceeEEEEcCCCcEE---EEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhc
Confidence 3566777777544 45568999 99999999999999998877654 233
Q ss_pred -CCCCCeeEEEEc-----CCC--CcEEEEEeCCCcEEEECC
Q psy10566 557 -GHTRTVSCVAWN-----PVY--HQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 557 -~h~~~V~~v~~s-----p~~--~~~l~s~s~Dg~I~iW~~ 589 (604)
+|.+.|++|+|+ ||+ +.+|++|+.||+|++|++
T Consensus 619 ~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 619 GAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp SSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred cccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 899999999999 883 489999999999999998
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=278.80 Aligned_cols=254 Identities=19% Similarity=0.262 Sum_probs=205.6
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~ 369 (604)
+++.++.+|.+.|++++|+|++++||+|+.||.|+|||+. .........+.+|...|.+++|+|+ +.+|++++.|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecC--CCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3567889999999999999999999999999999999997 4466778889999999999999987 99999999998
Q ss_pred ceEEEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-eeeeeeceeEEEEEEcCCCC
Q psy10566 370 CHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ-VLDSWEGVRVNCLWCRSDGK 444 (604)
Q Consensus 370 ~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~v~~l~~s~~g~ 444 (604)
.|++||+.++. ....+. .|...|.+++|+|+ +.++++++.|+.|++||+... ....
T Consensus 80 --~v~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~---------------- 140 (379)
T 3jrp_A 80 --KVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP---------------- 140 (379)
T ss_dssp --CEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE----------------
T ss_pred --EEEEEEcCCCceeEeeeec-CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee----------------
Confidence 89999999987 444443 67888999999998 889999999999999888532 1100
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-------------CCCEEEEEecCCeEEEEecCCCc----ee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-------------TDRLALLNVSTQGVHLWDLRDRI----LL 507 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~I~lwd~~~~~----~~ 507 (604)
.....+...|.+++|+| ++.++++++.|+.|++||++++. ..
T Consensus 141 ---------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 199 (379)
T 3jrp_A 141 ---------------------IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 199 (379)
T ss_dssp ---------------------EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred ---------------------EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE
Confidence 00112344566666666 79999999999999999998764 44
Q ss_pred eEeeccccceEEEEeeeCCCC---CcEEEEEeCCCcEEEEeCCCCcc---eEEe--eCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 508 RKFQGVTQGQFTIHSCFGGAN---QDFVASGSEDGKVYIWHVKRELP---IATL--SGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~---~~~l~sgs~dg~I~iwd~~~~~~---~~~l--~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
..+.+|... +.++.++|+ +++|++++.||.|++||+.++.. ...+ ..|...|++++|+|+ +.+|++++
T Consensus 200 ~~~~~h~~~---v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~ 275 (379)
T 3jrp_A 200 STLEGHSDW---VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS-GNVLALSG 275 (379)
T ss_dssp EEECCCSSC---EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS-SCCEEEEE
T ss_pred EEEecccCc---EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCC-CCEEEEec
Confidence 566677764 444556788 89999999999999999998642 2222 348889999999999 78999999
Q ss_pred CCCcEEEECCCC
Q psy10566 580 DDCTVRIWGPHL 591 (604)
Q Consensus 580 ~Dg~I~iW~~~~ 591 (604)
.||.|++|++..
T Consensus 276 ~dg~i~iw~~~~ 287 (379)
T 3jrp_A 276 GDNKVTLWKENL 287 (379)
T ss_dssp SSSSEEEEEEEE
T ss_pred CCCcEEEEeCCC
Confidence 999999999874
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-32 Score=284.03 Aligned_cols=293 Identities=18% Similarity=0.256 Sum_probs=240.6
Q ss_pred ccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCee
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~ 351 (604)
+.+....+|+.. ..+.+..+.+|.+.|++++|+|++ +|++|+.||+|++||+. +......+.+|...|.
T Consensus 139 s~dg~i~vwd~~------~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~----~~~~~~~~~~h~~~v~ 207 (464)
T 3v7d_B 139 ADDKMIRVYDSI------NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK----KGCCTHVFEGHNSTVR 207 (464)
T ss_dssp ETTSCEEEEETT------TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT----TTEEEEEECCCSSCEE
T ss_pred cCCCcEEEEECC------CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC----CCcEEEEECCCCCccE
Confidence 334555666643 346788899999999999999998 99999999999999998 5567888999999999
Q ss_pred EEEEC--CCCCeEEEEeCCCceEEEEEECCCceEE----------------------EEecCCCCCCeEEEEEecCCCEE
Q psy10566 352 YLAWS--PDSSHLLVVGPEDCHELWVWNIETELLR----------------------VKLNHSPEDSLTSCSWNRDGTKF 407 (604)
Q Consensus 352 ~l~~s--pd~~~l~s~~~d~~~~i~vwd~~~~~~~----------------------~~~~~~~~~~v~~~~~~~~~~~l 407 (604)
+++|+ +++.++++++.|+ .|++||+.++... .....+|...|.++ +++++++
T Consensus 208 ~l~~~~~~~~~~l~s~s~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l 283 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTGSRDN--TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIV 283 (464)
T ss_dssp EEEEEESSSCEEEEEEETTS--CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEE
T ss_pred EEEEecCCCCCEEEEEcCCC--cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEE
Confidence 99998 5788999999998 8999999876532 22233566777766 6789999
Q ss_pred EEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCC
Q psy10566 408 VCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDAT 483 (604)
Q Consensus 408 ~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~ 483 (604)
++|+.||.|++||+ .++.+..+.++ .+.+++++|+++.+++++.|+.|++||+.+++....+ .|...|.+++++
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-- 361 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-- 361 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--
Confidence 99999999999999 46677777665 6999999999999999999999999999987765544 478899999997
Q ss_pred CCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-eeCCCCCe
Q psy10566 484 DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LSGHTRTV 562 (604)
Q Consensus 484 ~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V 562 (604)
+.++++++.||.|++||+.++.....+.. ... +..+.++++++++++|+ ||.|++||+.+++++.. +.+|.+.|
T Consensus 362 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~---~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v 436 (464)
T 3v7d_B 362 DKFLVSAAADGSIRGWDANDYSRKFSYHH-TNL---SAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQI 436 (464)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC-TTC---CCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEE
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeeecC-CCC---ccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcE
Confidence 58999999999999999998876655532 221 22234468999999998 89999999999999885 67789999
Q ss_pred eEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 563 SCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 563 ~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.+++|++ ..++++++.||.+.+|-
T Consensus 437 ~~v~~~~--~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 437 WSVNFKG--KTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEEET--TEEEEEEEETTEEEEEE
T ss_pred EEEEecC--CEEEEEEEeCCeEEEEE
Confidence 9999983 57888888888776654
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-32 Score=308.33 Aligned_cols=201 Identities=12% Similarity=0.103 Sum_probs=171.2
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
..||.+.|++++|+|+|++||+|+.||+|+||+.. .......+ .|..+|.+++|+| +++|++++.|+ +|++|
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~----~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~--~v~lW 84 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQ----QVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKD--TVYVL 84 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECST----TCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTC--EEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCC----CcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcC--eEEEE
Confidence 45899999999999999999999999999999987 33334443 4788999999999 88999999998 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee------------eece--eEEEEEEcCC
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS------------WEGV--RVNCLWCRSD 442 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------------~~~~--~v~~l~~s~~ 442 (604)
|+.+++.+..+. +...|++++|+|+++++++|+.||.|++||++...... ..+| .|.+++|+|+
T Consensus 85 d~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 85 SLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp ETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred ECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 999999887775 55789999999999999999999999999997554321 1223 6999999996
Q ss_pred -CCEEEEEeCCCeEEEEEcCCCccccccc-------------------CCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 443 -GKSVLAADTHHRIRTYNFEHLTDSNLLQ-------------------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 443 -g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------------------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
+..+++++.|+.| +||+++.+....+. +...|.+++|+|++.++++++.|+.|++||++
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 5789999999999 99999876544332 23679999999999999999999999999998
Q ss_pred CCceee
Q psy10566 503 DRILLR 508 (604)
Q Consensus 503 ~~~~~~ 508 (604)
+++++.
T Consensus 242 ~g~~~~ 247 (902)
T 2oaj_A 242 SGHMIM 247 (902)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 887654
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-31 Score=295.12 Aligned_cols=270 Identities=15% Similarity=0.218 Sum_probs=223.0
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.+.|....+|+..... .......+.+.+|.+.|.+++|+|+|++|++|+.||+|+|||+. .......+.+|...
T Consensus 400 s~s~D~~i~~W~~~~~~-~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~----~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDD-KAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA----AGVSTRRFVGHTKD 474 (694)
T ss_dssp EEETTSEEEEEECCCST-TCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EEeCCCcEEEEEccCCC-cccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC----CCcceeEEeCCCCC
Confidence 34456667777754322 12234567899999999999999999999999999999999998 55667889999999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec--CCCCCCeEEEEEecCC--CEEEEEecCCeEEEEEcC-CC
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN--HSPEDSLTSCSWNRDG--TKFVCGGIRGQFYQCDIE-GQ 424 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~-~~ 424 (604)
|.+++|+|++++|++++.|+ +|++||........... .+|...|.+++|+|++ ..+++++.|+.|++||++ ++
T Consensus 475 v~~~~~s~~~~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDR--TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 552 (694)
T ss_dssp EEEEEECTTSSCEEEEETTS--CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred EEEEEEeCCCCEEEEEeCCC--EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999998 89999987654433322 3577889999999987 589999999999999995 56
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
....+.+| .|.+++|+|+++++++++.|+.|++||+.+.+....+.....+.+++|+|++.++++++ ++.|++||++
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETT
T ss_pred EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECC
Confidence 66777766 69999999999999999999999999999988777777788899999999998777665 5669999999
Q ss_pred CCceeeEeeccccc----------------eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 503 DRILLRKFQGVTQG----------------QFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 503 ~~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++..+..+..+... ...+.++.++|+|++|++|+.||.|+|||+.
T Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 632 SKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 99888777543211 1124556778999999999999999999985
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=286.21 Aligned_cols=270 Identities=14% Similarity=0.241 Sum_probs=223.2
Q ss_pred EEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEECCC---ce
Q psy10566 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWNIET---EL 382 (604)
Q Consensus 308 ~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~---~~ 382 (604)
.|+|++..+++++ .|+.. ++.+..+ .+|...|++++|+| ++++|++++.|+ +|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~------~w~~~-----g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg--~v~vwd~~~~~~~~ 100 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLR-----GKLIATLMENEPNSITSSAVSPGETPYLITGSDQG--VIKIWNLKEIIVGE 100 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCC-----CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTS--EEEEEEHHHHHTTC
T ss_pred hcCCccccccccc------ccccc-----ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCc--eEEEeECcccccCc
Confidence 4788998888765 38753 4567777 88999999999999 999999999998 899999877 43
Q ss_pred ---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc----CCCeeeeeeceeEEEEE----------------E
Q psy10566 383 ---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI----EGQVLDSWEGVRVNCLW----------------C 439 (604)
Q Consensus 383 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~----~~~~~~~~~~~~v~~l~----------------~ 439 (604)
....+ .|...|.+++|+|++++|++|+.||.|++||+ .++.......+.+..+. +
T Consensus 101 ~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 101 VYSSSLTY--DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp CCSCSEEE--ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred ccceeeec--cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 22222 47889999999999999999999999999998 46666655555555554 4
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCccccccc---CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-cccc
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ---EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-GVTQ 515 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~-~~~~ 515 (604)
++++..+++++.|+.|++||+++.+....+. +...|.+++|+|++.++++++.||.|++||+++++++..+. .+..
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 4679999999999999999999887665554 57899999999999999999999999999999999988876 5555
Q ss_pred ceEEEEee-eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC--------------------------CCCeeEEEEc
Q psy10566 516 GQFTIHSC-FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH--------------------------TRTVSCVAWN 568 (604)
Q Consensus 516 ~~~~i~~~-~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h--------------------------~~~V~~v~~s 568 (604)
.+..+... .+++++.+|++|+.||.|++||+.+++.+..+.+| ...|++++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 44444332 56678999999999999999999999988887654 4558888888
Q ss_pred CCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+ +.+|++|+.||.|++||+.+++.
T Consensus 339 -~-~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 339 -N-DKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp -T-TEEEEEEGGGTEEEEEETTCGGG
T ss_pred -C-ceEEEecCCCCeEEEEECCCccc
Confidence 5 68999999999999999988763
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-31 Score=266.84 Aligned_cols=282 Identities=9% Similarity=0.092 Sum_probs=213.9
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEE-EeCCCce
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV-VGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s-~~~d~~~ 371 (604)
++..+.+|.+.|++++|+|||++||+|+.++ ++||+++ ......... ...+..+++.++++.++. ++.++
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~-- 81 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVH----PVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKE-- 81 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEET----TEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTT--
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecC----Ccceeeeee--cCCeEEEEEcCCCCEEEEEECCcc--
Confidence 3456788999999999999999999998665 7899988 333333322 235888999999988855 45555
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--CeeeeeeceeEEEEEEcCCCCEEEE-
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGVRVNCLWCRSDGKSVLA- 448 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~v~~l~~s~~g~~l~~- 448 (604)
+|++||..+++.+..+. +...|.+++|+++. ++++ .++.|++||+.. +.+..+.. ....+++++ ..+++
T Consensus 82 ~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK--VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp EEEEEETTTTEEEEEEE--CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEET--TEEEEE
T ss_pred EEEEEECCCCcEEEEEE--CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEEc--cEEEEe
Confidence 89999999999888876 55689999998764 3333 488999999953 45555555 555566777 55665
Q ss_pred -EeCCCeEEEEEcCCCc-----------------ccccccCCCCeeEEEECCCCCEEEEEecCCe-EEEEecCCCceeeE
Q psy10566 449 -ADTHHRIRTYNFEHLT-----------------DSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRK 509 (604)
Q Consensus 449 -~~~dg~I~i~d~~~~~-----------------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-I~lwd~~~~~~~~~ 509 (604)
++.+|.|++||+.+.. ...+..|..+|.+++|+|+++++++++.|++ |++||+++++.+..
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 5889999999998754 3445668899999999999999999999998 99999999999999
Q ss_pred ee-c-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc--eEEee---------------------CCCCCeeE
Q psy10566 510 FQ-G-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP--IATLS---------------------GHTRTVSC 564 (604)
Q Consensus 510 ~~-~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~--~~~l~---------------------~h~~~V~~ 564 (604)
+. + |... +.++.++|++++|++|+.|++|+|||+..+.. ...+. .+......
T Consensus 234 ~~~g~h~~~---v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (355)
T 3vu4_A 234 FRRGLDRAD---VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCK 310 (355)
T ss_dssp EECTTCCSC---EEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCE
T ss_pred EEcCCCCCc---EEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceE
Confidence 98 5 7664 44566689999999999999999999976531 11111 11223477
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 565 VAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 565 v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
++|+|+ +..+++++.||.+++|++..+...
T Consensus 311 ~a~~~d-~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 311 IAWISE-SSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp EEESSS-SEEEEEETTTTEEEEEEEEEETTT
T ss_pred EEEeCC-CCEEEEEeCCCeEEEEEEEcCCCC
Confidence 999999 889999999999999998776543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=282.39 Aligned_cols=259 Identities=10% Similarity=0.003 Sum_probs=207.8
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
-...|.+++|||||+++||++.|++|+ |.. .. ..+.+|...|.+++|+|+| .++ .+.+|+
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~----~~---~~l~gh~~~v~~V~FsPdg-------~~~--~~~~~~-- 73 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPK----YA---KDINCNSKNLFHVKEFPLE-------FEN--KLDFEL-- 73 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EEC----CC---SCCSSBGGGTEEEEEECCC-------CCC--TTTTSC--
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccc----cc---ceecCCCccEEEEEECCCC-------Ccc--eEEEEe--
Confidence 457899999999999999999999999 654 22 2347899999999999998 344 344444
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece------eEEEEEEcCCCCEEEEEeCCC
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV------RVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~v~~l~~s~~g~~l~~~~~dg 453 (604)
++....+...+...|.+++|+|+|..+++++.||.|++||.++ .+..+..+ .+.+++|+|||+++++|+.||
T Consensus 74 -~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 74 -AQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp -CCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred -CCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 3322333334578899999999999999999999999999765 44444422 399999999999999999999
Q ss_pred eEEEEEcCCCcc-------ccc-----ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce---eeEee-ccccce
Q psy10566 454 RIRTYNFEHLTD-------SNL-----LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL---LRKFQ-GVTQGQ 517 (604)
Q Consensus 454 ~I~i~d~~~~~~-------~~~-----~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~---~~~~~-~~~~~~ 517 (604)
+|++||+.++.. ... ..|...|.+++|+|+| +++++.|++|++||+.++.. .+++. +|...+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence 999999998753 122 3356799999999999 88899999999999988774 34563 565544
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE--cCCCCcEEEEEeCCCcEEEECCC
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW--NPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~--sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
..+ .++ |+.+|+++ +++|++||+.+++......+|.+.|.+++| +|+ +..+++++.||+ ++|..+
T Consensus 230 ~sv---aFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d-~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 230 TDL---KIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE-STILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCE---EEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS-CEEEEECSSCEE-EEEESS
T ss_pred EEE---EEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC-CCEEEEEcCCCC-EEEeec
Confidence 444 344 58899997 699999999988874444489999999999 999 799999999999 999875
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=281.27 Aligned_cols=281 Identities=15% Similarity=0.239 Sum_probs=224.4
Q ss_pred cEEEEEEcCCCCe-EEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEECCC
Q psy10566 303 EVWFCKFSPDGLK-LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 303 ~V~~v~fspdg~~-lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
....++++|+... +++++.||.|+||++............+.+|...|.+++|+| ++.+|++++.|+ +|++||+.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg--~v~vw~~~~ 113 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC--TVMVWEIPD 113 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS--EEEEEECCT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC--eEEEEEccC
Confidence 4456899998764 446789999999998632211134556788999999999999 999999999998 899999998
Q ss_pred c-------eEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcC-CCeeeee--ece--eEEEEEEcCCCCEEE
Q psy10566 381 E-------LLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIE-GQVLDSW--EGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 381 ~-------~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~-~~~~~~~--~~~--~v~~l~~s~~g~~l~ 447 (604)
+ .....+. +|...|.+++|+|++ ..+++++.||.|++||+. ++.+..+ .++ .|.+++|+|+++.++
T Consensus 114 ~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 114 GGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 7 3444444 688999999999998 699999999999999994 6666677 444 799999999999999
Q ss_pred EEeCCCeEEEEEcCCCcccccc--cCCCC-eeEEEECCCCCEEEEE---ecCCeEEEEecCCCce-eeEee-ccccceEE
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLL--QEDHP-VMSFTIDATDRLALLN---VSTQGVHLWDLRDRIL-LRKFQ-GVTQGQFT 519 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~--~~~~~-i~~~~~s~~~~~l~~~---~~dg~I~lwd~~~~~~-~~~~~-~~~~~~~~ 519 (604)
+++.|+.|++||+++......+ .+... +.++.|+|++.+++++ +.|+.|++||++++.. +.... .+...
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 269 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG--- 269 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS---
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc---
Confidence 9999999999999987766554 34444 8999999999999999 7899999999998765 33333 23333
Q ss_pred EEeeeCCCCCcEEE-EEeCCCcEEEEeCCCCcc-eEEeeC--CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 520 IHSCFGGANQDFVA-SGSEDGKVYIWHVKRELP-IATLSG--HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 520 i~~~~~~~~~~~l~-sgs~dg~I~iwd~~~~~~-~~~l~~--h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+..+.++|++++++ +|+.||.|++||+.++++ +..+.. |...|.+++|+|+ +.++++ .|+.+++|++.++
T Consensus 270 v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~-~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK-RGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG-GGSCGG--GTEEEEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecc-ccccee--cceeEEEEEcCCC
Confidence 33455678999886 555799999999999885 555554 4589999999999 666654 5779999998764
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-31 Score=274.07 Aligned_cols=270 Identities=14% Similarity=0.148 Sum_probs=224.9
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC----C---CeEEEEECCCeEEEEEeCCCCceeEe----
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD----G---LKLATGSKDTTVIIWDVDPVTFTCQH---- 339 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd----g---~~lasgs~dg~i~iwd~~~~~~~~~~---- 339 (604)
.+.+....+|+........+......+.+|...|++++|+|+ | ++|++++.||.|++|++. ....
T Consensus 32 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~----~~~~~~~~ 107 (397)
T 1sq9_A 32 CSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT----REDETKKV 107 (397)
T ss_dssp EETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEE----ECTTTCCE
T ss_pred EcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEcc----CCcccccc
Confidence 344667778887665555566788899999999999999999 9 999999999999999998 3333
Q ss_pred -eEEeccC-----CCCeeEEEEC----CCCCe-EEEEeCCCceEEEEEECCC------ceEEE-----Eec------CCC
Q psy10566 340 -RKTLEGH-----TLGVAYLAWS----PDSSH-LLVVGPEDCHELWVWNIET------ELLRV-----KLN------HSP 391 (604)
Q Consensus 340 -~~~l~~h-----~~~V~~l~~s----pd~~~-l~s~~~d~~~~i~vwd~~~------~~~~~-----~~~------~~~ 391 (604)
...+..| ...|.+++|+ |++++ |++++.++ .|++||+.+ +..+. .+. ..|
T Consensus 108 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (397)
T 1sq9_A 108 IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG--TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 185 (397)
T ss_dssp EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS--CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC--cEEEEeCCccccccccceeeccCcceeeeeeccccCC
Confidence 6777888 5899999999 99999 99999998 899999988 55443 332 356
Q ss_pred CCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec---e-----eEEEEEEcCCCCEEEEEeCC---CeEEEEE
Q psy10566 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG---V-----RVNCLWCRSDGKSVLAADTH---HRIRTYN 459 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~---~-----~v~~l~~s~~g~~l~~~~~d---g~I~i~d 459 (604)
...|.+++|+|++ .+++++.||.|++||+. ++.+..+.. + .+.+++|+|+++++++++.| +.|++||
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEE
Confidence 7889999999999 99999999999999995 666777665 3 69999999999999999999 9999999
Q ss_pred cCCCccccccc--------------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee------cc------
Q psy10566 460 FEHLTDSNLLQ--------------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ------GV------ 513 (604)
Q Consensus 460 ~~~~~~~~~~~--------------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~------~~------ 513 (604)
+.+.+....+. +...|.+++|+|+++++++++.|+.|++||+++++.+..+. +|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1sq9_A 265 TEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILA 344 (397)
T ss_dssp TTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCC
T ss_pred CCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhc
Confidence 98876555443 68899999999999999999999999999999999999998 66
Q ss_pred ---------ccceEEEEeeeCCCCC----------cEEEEEeCCCcEEEEeCCCCc
Q psy10566 514 ---------TQGQFTIHSCFGGANQ----------DFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 514 ---------~~~~~~i~~~~~~~~~----------~~l~sgs~dg~I~iwd~~~~~ 550 (604)
... +..+.++|++ ++|++|+.||.|++||+.+|+
T Consensus 345 g~~~~~~~~~~~---v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 345 VDEHGDSLAEPG---VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp BCTTSCBCSSCC---EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccCCc---eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 554 4445566887 799999999999999998764
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-30 Score=259.29 Aligned_cols=273 Identities=16% Similarity=0.211 Sum_probs=227.2
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.+.|....+|+..... .....+.+.+.+|.+.|.+++|+|+|++|++|+.|+.|++|+.. ..........+...
T Consensus 56 S~s~D~~i~vWd~~~~~-~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~----~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 56 SASRDKTIIMWKLTRDE-TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT----TGTTTRRFVGHTKD 130 (340)
T ss_dssp EEETTSCEEEEEECCSS-SCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EEcCCCeEEEEECCCCC-cccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec----ccceeeeecCCCCc
Confidence 45667788888865432 22345677899999999999999999999999999999999988 44556667778889
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCC--CEEEEEecCCeEEEEEcC-CCee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG--TKFVCGGIRGQFYQCDIE-GQVL 426 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~-~~~~ 426 (604)
+..+.+++++.++++++.|+ .+++||.............|...+..++|++++ ..+++++.|+.|++||+. ++.+
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~--~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDK--TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK 208 (340)
T ss_dssp EEEEEECTTSSCEEEEETTS--CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eeEEEEeecCccceeecCCC--eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence 99999999999999999998 899999988877766666888999999999865 578899999999999995 5666
Q ss_pred eeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 427 DSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 427 ~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
..+.++ .|.+++|+|+++++++++.|+.|++||+.+......+.+...+.+++++|++.+ ++++.|+.|++||++++
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSE-EEEEETTEEEEEETTTT
T ss_pred eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCce-eeccCCCEEEEEECCCC
Confidence 666665 699999999999999999999999999999888888888889999999998765 55667999999999988
Q ss_pred ceeeEeeccc------cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 505 ILLRKFQGVT------QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 505 ~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
..+..+.... .....+.++.++|++++|++|+.||.|+|||+++|+
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 288 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 7776665321 112245556778999999999999999999999885
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-30 Score=275.01 Aligned_cols=284 Identities=14% Similarity=0.111 Sum_probs=224.5
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-------------------------------------
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE------------------------------------- 344 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~------------------------------------- 344 (604)
.++.+++|+|||++|+++ .++.|++||+..+.. ...+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNH-WEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTE-EEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCc-ceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 578999999999976665 578999999874330 11222222
Q ss_pred -----------------cCCCCeeEEEECCCCCeE-EEEeCCCceEEEEEECC--CceEEEEecC-CCCCCeEEEEEecC
Q psy10566 345 -----------------GHTLGVAYLAWSPDSSHL-LVVGPEDCHELWVWNIE--TELLRVKLNH-SPEDSLTSCSWNRD 403 (604)
Q Consensus 345 -----------------~h~~~V~~l~~spd~~~l-~s~~~d~~~~i~vwd~~--~~~~~~~~~~-~~~~~v~~~~~~~~ 403 (604)
+|...|.+++|+|++++| ++++.|+ .|++||+. ++.....+.. .+...|.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDK--SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGT--EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCC--eEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 344579999999999996 7888888 89999999 7777666542 45678999999999
Q ss_pred CCEEEEEecCCeEEEEEcC-CCeee----eeece--eEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCccccc--ccC
Q psy10566 404 GTKFVCGGIRGQFYQCDIE-GQVLD----SWEGV--RVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLTDSNL--LQE 471 (604)
Q Consensus 404 ~~~l~s~~~dg~i~iwd~~-~~~~~----~~~~~--~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~~~~~--~~~ 471 (604)
+++|++|+.+|.|++|++. +.... .+.++ .|.+++|+|+ ++++++++.|+.|++||+.+...... ..|
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 9999999999999999984 33222 44444 7999999999 99999999999999999998765543 357
Q ss_pred CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc----------------------cceEEEEeeeCCCCC
Q psy10566 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT----------------------QGQFTIHSCFGGANQ 529 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~----------------------~~~~~i~~~~~~~~~ 529 (604)
...|.+++|+ +++++++++.|+.|++||+++++.+..+..+. .....+..+.++|++
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 8899999999 99999999999999999999999888876432 112234556667999
Q ss_pred cEEEEEe-CCCcEEEEeC--CCC---cceEEeeCCCCCeeEEEEcCCCCcEEEEEeC------CCcEEEECCCCC
Q psy10566 530 DFVASGS-EDGKVYIWHV--KRE---LPIATLSGHTRTVSCVAWNPVYHQMIASVSD------DCTVRIWGPHLN 592 (604)
Q Consensus 530 ~~l~sgs-~dg~I~iwd~--~~~---~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~------Dg~I~iW~~~~~ 592 (604)
+++++++ .|+.|+||++ .++ +.+..+.+| +.|.+++|+|+ +.++++++. +..|.+|.++..
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~-~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHND-EFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETT-EEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCC-cEEEEEecccCCCCCCcceEEEEEEcC
Confidence 9999999 8999999999 565 677788888 88999999996 444444343 556899987654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-30 Score=294.68 Aligned_cols=301 Identities=13% Similarity=0.134 Sum_probs=244.9
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
+....+|+.. ....+..+.+|.+.|++++|+|+|++|++|+.||.|+|||+. +......+.+|...|.++
T Consensus 34 ~g~v~iwd~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~----~~~~~~~~~~~~~~v~~~ 103 (814)
T 3mkq_A 34 SGRVEIWNYE------TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN----TGEKVVDFEAHPDYIRSI 103 (814)
T ss_dssp TSEEEEEETT------TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEE
T ss_pred CCEEEEEECC------CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC----CCcEEEEEecCCCCEEEE
Confidence 3445566543 245678889999999999999999999999999999999998 556778889999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeeeec
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSWEG 431 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~ 431 (604)
+|+|++++|++++.|+ .|++||+.++.........|...|.+++|+| ++..+++++.||.|++||+. +.....+..
T Consensus 104 ~~s~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 104 AVHPTKPYVLSGSDDL--TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EECSSSSEEEEEETTS--EEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEeCCCCEEEEEcCCC--EEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence 9999999999999998 8999999987444444447888999999999 88999999999999999994 444444433
Q ss_pred ---eeEEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 432 ---VRVNCLWCRS--DGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 432 ---~~v~~l~~s~--~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
..+.+++|+| ++..+++++.||.|++||+.+......+. +...+.+++|+|++.++++++.||.|++||+.+++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4689999999 99999999999999999998876555444 77899999999999999999999999999999999
Q ss_pred eeeEeeccccceEEEEeeeCCCCCc--EEEEEeCCCcEEEEeCCCCcceEE-----------------------------
Q psy10566 506 LLRKFQGVTQGQFTIHSCFGGANQD--FVASGSEDGKVYIWHVKRELPIAT----------------------------- 554 (604)
Q Consensus 506 ~~~~~~~~~~~~~~i~~~~~~~~~~--~l~sgs~dg~I~iwd~~~~~~~~~----------------------------- 554 (604)
.+..+..+...+.. +.++|++. ++++++ ++.+.+|++..+.....
T Consensus 262 ~~~~~~~~~~~v~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 337 (814)
T 3mkq_A 262 VEKTLNVGLERSWC---IATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNE 337 (814)
T ss_dssp EEEEECCSSSSEEE---EEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCC
T ss_pred EEEEeecCCCcEEE---EEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccc
Confidence 99999888775444 44567876 455555 66688888764332221
Q ss_pred --------------eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 555 --------------LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 555 --------------l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+..+...+.+++|+|+ +.++++++ ||.+.+|++...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~la~~~-~~~~~i~~~~~~ 387 (814)
T 3mkq_A 338 EVEQDEPLSLQTKELGSVDVFPQSLAHSPN-GRFVTVVG-DGEYVIYTALAW 387 (814)
T ss_dssp CCCSSSCBCCCCEEECCCSSCCSEEEECTT-SSEEEEEE-TTEEEEEETTTT
T ss_pred ccccCccceeeeecCCCCccCCceeEECCC-CCEEEEec-CCEEEEEECccc
Confidence 1234456789999998 78888887 889999987543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-30 Score=271.21 Aligned_cols=278 Identities=15% Similarity=0.209 Sum_probs=219.8
Q ss_pred cCccccccccCcCcCCCCcccee--ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCe
Q psy10566 273 LENVSLLVDHLCTKEEFPCETTQ--VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350 (604)
Q Consensus 273 ~~~~~l~~d~~~~~~~~p~~~~~--~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V 350 (604)
++....+|+... .++.+ .+.+|.+.|++|+|+|+|++||+|+.||+|+|||+. +.+.+..+.+|...|
T Consensus 123 ld~tV~lWd~~t------g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~----~~~~~~~~~~h~~~v 192 (420)
T 4gga_A 123 LDNSVYLWSASS------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ----QQKRLRNMTSHSARV 192 (420)
T ss_dssp ETTEEEEEETTT------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCE
T ss_pred eCCEEEEEECCC------CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC----CCcEEEEEeCCCCce
Confidence 355666776543 23344 455788899999999999999999999999999998 567788999999999
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CC----e
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQ----V 425 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~----~ 425 (604)
.+++|+ +..+++++.|+ .+++||............+|...+..+.|+|++.++++++.|+.+++|+.. ++ .
T Consensus 193 ~~~s~~--~~~l~sgs~d~--~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~ 268 (420)
T 4gga_A 193 GSLSWN--SYILSSGSRSG--HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP 268 (420)
T ss_dssp EEEEEE--TTEEEEEETTS--EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC
T ss_pred EEEeeC--CCEEEEEeCCC--ceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccccee
Confidence 998875 57899999998 899999987665544445788999999999999999999999999999984 22 2
Q ss_pred eeeeece--eEEEEEEcCCCCEE-EE--EeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEEE
Q psy10566 426 LDSWEGV--RVNCLWCRSDGKSV-LA--ADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVHL 498 (604)
Q Consensus 426 ~~~~~~~--~v~~l~~s~~g~~l-~~--~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~l 498 (604)
+.....+ .|.+++|+|++..+ ++ |+.|+.|++||+.++.....+.....+.++.|+++++.+++++ .|+.|++
T Consensus 269 ~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~i 348 (420)
T 4gga_A 269 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVI 348 (420)
T ss_dssp SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEE
T ss_pred eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEE
Confidence 3333333 69999999976544 43 3579999999999998888888888999999999999998876 6899999
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
||+.+++++..+.+|...+. ++.++|+|++|+||+.||+|+|||+....+......+...+....+
T Consensus 349 wd~~~~~~v~~l~gH~~~V~---~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 349 WKYPTMAKVAELKGHTSRVL---SLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp EETTTCCEEEEECCCSSCEE---EEEECTTSSCEEEEETTTEEEEECCSCSSCC---------------
T ss_pred EECCCCcEEEEEcCCCCCEE---EEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 99999999999999988544 4566899999999999999999999887777766666555444444
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-31 Score=270.41 Aligned_cols=249 Identities=14% Similarity=0.237 Sum_probs=209.8
Q ss_pred eeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEec-CCCCCCeEEEEEec-CCCEEEEEec
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNR-DGTKFVCGGI 412 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~s~~~ 412 (604)
.......+.+|...|.+++|+|++ ++|++++.|+ .|++||+.++.....+. .+|...|.+++|+| ++.++++++.
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGG--DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTS--CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCC--eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC
Confidence 345566788999999999999999 8999999998 89999999888776665 36889999999999 7899999999
Q ss_pred CCeEEEEEcCCCeeeeeece-----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCC-E
Q psy10566 413 RGQFYQCDIEGQVLDSWEGV-----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR-L 486 (604)
Q Consensus 413 dg~i~iwd~~~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~-~ 486 (604)
|+.|++||+++..+..+..+ .+.+++|+|+++.+++++.|+.|++||++.........+...|.+++|+|++. +
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 99999999988877777654 49999999999999999999999999996555555566889999999999999 9
Q ss_pred EEEEecCCeEEEEecCC----CceeeEeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC--
Q psy10566 487 ALLNVSTQGVHLWDLRD----RILLRKFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHT-- 559 (604)
Q Consensus 487 l~~~~~dg~I~lwd~~~----~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-- 559 (604)
+++++.|+.|++||+++ +..+..+ +|... +.++.++| ++++|++++.||.|++||+++++....+.+|.
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~---v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKP---VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSC---EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBC
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCc---eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccc
Confidence 99999999999999998 5556555 46554 44455678 99999999999999999999998887777553
Q ss_pred ---------------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 560 ---------------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 560 ---------------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+..++|+|+ +.+ +++.||.|++||+.+++
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~d-g~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPD-DQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCC-TTT--CTTCCCCEEEEETTTCC
T ss_pred ccccccceEEeccCCCCceEEEecCC-ccc--ccCCCCeEEEEecCCCc
Confidence 23444666666 343 77799999999998876
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.4e-31 Score=294.60 Aligned_cols=252 Identities=18% Similarity=0.250 Sum_probs=204.5
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CCeEEEEeCCCce
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPEDCH 371 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~~~ 371 (604)
+.++.+|.+.|++++|+|+|++|++|+.||+|+|||+. .........+.+|..+|++++|+|+ +++|++++.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~--~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-- 77 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-- 77 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS--
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecC--CCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC--
Confidence 45789999999999999999999999999999999997 4466778899999999999999998 99999999998
Q ss_pred EEEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC---eeeeeeceeEEEEEEcCCCC
Q psy10566 372 ELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ---VLDSWEGVRVNCLWCRSDGK 444 (604)
Q Consensus 372 ~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~v~~l~~s~~g~ 444 (604)
.|++||+.++. ....+ ..|...|++++|+|+ +..+++|+.||.|++||+... ....+
T Consensus 78 ~I~vwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~--------------- 141 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII--------------- 141 (753)
T ss_dssp CEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE---------------
T ss_pred eEEEEECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe---------------
Confidence 89999999986 44444 368889999999998 899999999999999888532 11111
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-------------CCCEEEEEecCCeEEEEecCCC----cee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-------------TDRLALLNVSTQGVHLWDLRDR----ILL 507 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~I~lwd~~~~----~~~ 507 (604)
..+...|.+++|+| ++..+++++.||.|++||++++ ...
T Consensus 142 ------------------------~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 142 ------------------------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp ------------------------ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred ------------------------ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee
Confidence 12344566666666 6899999999999999999887 455
Q ss_pred eEeeccccceEEEEeeeCCCC---CcEEEEEeCCCcEEEEeCCCCc-----ceEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 508 RKFQGVTQGQFTIHSCFGGAN---QDFVASGSEDGKVYIWHVKREL-----PIATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~---~~~l~sgs~dg~I~iwd~~~~~-----~~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
..+.+|...+ .++.++|+ ++++++|+.||.|++||+.++. .+....+|.+.|++++|+|+ +.++++++
T Consensus 198 ~~~~~h~~~V---~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd-g~~l~s~s 273 (753)
T 3jro_A 198 STLEGHSDWV---RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS-GNVLALSG 273 (753)
T ss_dssp EEECCCSSCE---EEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTT-TCCEEEEC
T ss_pred eeecCCCCcE---EEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCC-CCEEEEEc
Confidence 6777777754 44555788 8999999999999999999864 33344568899999999999 88999999
Q ss_pred CCCcEEEECCCCCC
Q psy10566 580 DDCTVRIWGPHLNT 593 (604)
Q Consensus 580 ~Dg~I~iW~~~~~~ 593 (604)
.||.|++|++..+.
T Consensus 274 ~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 274 GDNKVTLWKENLEG 287 (753)
T ss_dssp SSSCEECCBCCSSS
T ss_pred CCCEEEEEecCCCC
Confidence 99999999998644
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-30 Score=267.47 Aligned_cols=252 Identities=15% Similarity=0.200 Sum_probs=206.7
Q ss_pred ceeeccc-CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 293 TTQVLND-HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~-H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
....+.. |.+.|++++|+|++++|++|+.||.|++||+. .......+.+|...|.+++| ++..+++++.|+
T Consensus 125 ~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-- 196 (401)
T 4aez_A 125 VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE----SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSG-- 196 (401)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTS--
T ss_pred EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc----CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCC--
Confidence 3444444 89999999999999999999999999999998 55667888899999999999 457999999998
Q ss_pred EEEEEECCCc-eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 372 ELWVWNIETE-LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 372 ~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
.|++||+... .....+ ..|...|.+++|+|++.+|++|+.||.|++||+. ++.+..+..+ .|.+++|+|++..++
T Consensus 197 ~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp EEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEE
T ss_pred CEEEEecccCcceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEE
Confidence 8999999854 444444 4688999999999999999999999999999995 5666666554 799999999876554
Q ss_pred -EEe--CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEEEEecCCCceeeE--eeccccceEEE
Q psy10566 448 -AAD--THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVHLWDLRDRILLRK--FQGVTQGQFTI 520 (604)
Q Consensus 448 -~~~--~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~lwd~~~~~~~~~--~~~~~~~~~~i 520 (604)
+++ .|+.|++||+.+......+.+...+.+++|+|++.++++++ .||.|++||+.++..... +.+|...+.
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~-- 353 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVL-- 353 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCC--
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEE--
Confidence 443 69999999999988888888889999999999999999954 899999999998765544 557766544
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
.+.++|++.+|++++.||.|++||+.+++.+....
T Consensus 354 -~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 354 -YSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp -EEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred -EEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 34557999999999999999999999988776554
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-30 Score=262.96 Aligned_cols=241 Identities=16% Similarity=0.202 Sum_probs=208.5
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
+..|..+|.+++|+|++++|++++.++ .|++||+.+++ ....+. .|...|.+++|+|+++++++++.||.|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNH--EVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSS--EEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCC--EEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 345889999999999999999999998 89999999987 666665 6888999999999999999999999999999
Q ss_pred cCCCe-eeee--e--ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc----ccc-ccCCCCeeEEEECCCCCEEEEE
Q psy10566 421 IEGQV-LDSW--E--GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD----SNL-LQEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 421 ~~~~~-~~~~--~--~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~----~~~-~~~~~~i~~~~~s~~~~~l~~~ 490 (604)
++... .... . ...+.+++|+|+++.+++++.++.|++||+..... ... ..+...|.+++|+|++.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 95433 2222 2 23799999999999999999999999999988653 222 3467899999999999999999
Q ss_pred ecCCeEEEEecC------------------CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 491 VSTQGVHLWDLR------------------DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 491 ~~dg~I~lwd~~------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
+.|+.|++||++ .++.+..+.+|...+ ..+.++|++++|++++.||.|++||+++++++
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV---HGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE---EEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE---EEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 999999999953 677888888777744 44556799999999999999999999999999
Q ss_pred EEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 553 ~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..+..|...|++++|+|+ +.+++++ .||.|++|++..
T Consensus 238 ~~~~~~~~~v~~~~~~~~-~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITE-SSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEECSSCCEEEEEEEET-TEEEEEE-TTSSCEEEEEET
T ss_pred EEEccCCCCeEEEEEecC-CCEEEEE-eCCeEEEEEccC
Confidence 999999999999999998 7778777 899999999987
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-29 Score=255.79 Aligned_cols=251 Identities=12% Similarity=0.147 Sum_probs=218.8
Q ss_pred ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC
Q psy10566 335 FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 335 ~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
+.......+.+|...|++++|+|++++|++++.|+ .|++||+.+++....+. .|...|.+++|+|++++|++++.||
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDS--SASVWYSLNGERLGTLD-GHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSS--CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTT
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCC--EEEEEeCCCchhhhhhh-hcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 34455677899999999999999999999999998 89999999999888876 6888999999999999999999999
Q ss_pred eEEEEEcC-CCeeeeeec-eeEEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCcccc------------cccCCC--
Q psy10566 415 QFYQCDIE-GQVLDSWEG-VRVNCLWCRSDGKSVLAADTH-----HRIRTYNFEHLTDSN------------LLQEDH-- 473 (604)
Q Consensus 415 ~i~iwd~~-~~~~~~~~~-~~v~~l~~s~~g~~l~~~~~d-----g~I~i~d~~~~~~~~------------~~~~~~-- 473 (604)
.|++||+. ++.+..+.. ..+.+++|+|+++.+++++.+ +.|++||+....... ...+..
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred eEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 99999994 666666653 379999999999999999999 999999997754321 122233
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCC-CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
.+.+++|+|+++++++++.||.|++||+++ +..+..+..|...+ ..+.++|++++|++++.||.|++||+.+++.+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI---SDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE---EEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce---eEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 899999999999999999999999999998 78888888887754 44556799999999999999999999999999
Q ss_pred EEeeCCCCCeeEEEEcCCCCcEEEEEeCCC--------------cEEEECCCCCC
Q psy10566 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDDC--------------TVRIWGPHLNT 593 (604)
Q Consensus 553 ~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg--------------~I~iW~~~~~~ 593 (604)
..+. +...+.+++|+|+ +.++++++.++ .+++|+..++.
T Consensus 254 ~~~~-~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 254 KKYE-TDCPLNTAVITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp EEEE-CSSCEEEEEECSS-SSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred eeec-CCCCceeEEecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 8888 7788999999999 78999999888 89999998765
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-31 Score=281.83 Aligned_cols=276 Identities=12% Similarity=0.051 Sum_probs=208.7
Q ss_pred CccceeecccCCCcEEEEEEcCCC---------CeEEE-------------------EECCCeEEEEEeCCCCceeEeeE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDG---------LKLAT-------------------GSKDTTVIIWDVDPVTFTCQHRK 341 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg---------~~las-------------------gs~dg~i~iwd~~~~~~~~~~~~ 341 (604)
+.+...++. +.+.|++|+|+|++ ++||+ ++.|++|+||++...........
T Consensus 123 ~~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~ 201 (524)
T 2j04_B 123 GKRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQ 201 (524)
T ss_dssp CCSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEE
T ss_pred CCcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEE
Confidence 344444454 67889999999886 56666 55788999999974332233345
Q ss_pred EeccCCCCeeEEEECCC------CCeEEEEeCCCceEEEEEECCCceEE-----------EEecCCCCCCeEEEEEecCC
Q psy10566 342 TLEGHTLGVAYLAWSPD------SSHLLVVGPEDCHELWVWNIETELLR-----------VKLNHSPEDSLTSCSWNRDG 404 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd------~~~l~s~~~d~~~~i~vwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~ 404 (604)
.+.+|.+.|.+++|+|+ +.+|++++.|+ +|++||+.++... ..+ .+|...|++++|+++
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dg--tvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~sv~~s~~- 277 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEG--TINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITTFDFLSP- 277 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTS--CEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEEEEESSS-
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCC--eEEEEEcCCCccccccceeecCceEEE-EcCCCCEEEEEecCC-
Confidence 56778899999999997 57999999998 8999999876421 122 367789999999986
Q ss_pred CEEEEEecCCeEEEEEcC-C-Ceeeeeece--eEEEE--EEcCCC-CEEEEEeCCCeEEEEEcCCCcccccc-cCC--CC
Q psy10566 405 TKFVCGGIRGQFYQCDIE-G-QVLDSWEGV--RVNCL--WCRSDG-KSVLAADTHHRIRTYNFEHLTDSNLL-QED--HP 474 (604)
Q Consensus 405 ~~l~s~~~dg~i~iwd~~-~-~~~~~~~~~--~v~~l--~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~--~~ 474 (604)
..|++|+.||+|++||++ + .....+.+| .|.++ ++++++ ..+++++.|++|++||+++.+....+ .+. ..
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 489999999999999996 4 233445555 69988 568887 89999999999999999886554333 232 35
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE
Q psy10566 475 VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 475 i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~ 554 (604)
+.+++|+|++..+++++.|++|++||++++.++..+.+|...+. ++.++|++++|++|+.||+|++||...+ .+..
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~---sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~ 433 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTIT---AIGVSRLHPMVLAGSADGSLIITNAARR-LLHG 433 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEE---EEECCSSCCBCEEEETTTEEECCBSCSS-TTTC
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceE---EEEeCCCCCeEEEEECCCEEEEEechHh-hccc
Confidence 78999999999999999999999999999998888989888554 4566899999999999999999998754 3322
Q ss_pred eeC-----CCCCeeEEEEcCCCCcEE
Q psy10566 555 LSG-----HTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 555 l~~-----h~~~V~~v~~sp~~~~~l 575 (604)
+.. +...|.+++|+|+ +..+
T Consensus 434 ~~~~~~~~~~~~v~~v~~sp~-g~~~ 458 (524)
T 2j04_B 434 IKNSSATQKSLRLWKWDYSIK-DDKY 458 (524)
T ss_dssp C------CCCCEEEECBCCSS-SCEE
T ss_pred cccCccceeeeEEEEeccCCC-CCeE
Confidence 221 1225789999999 5544
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=267.26 Aligned_cols=246 Identities=17% Similarity=0.289 Sum_probs=204.1
Q ss_pred EEeccCCCCeeEEEECCC-CCeEEEEeCCCceEEEEEECCC----------ceEEEEecCCCCCCeEEEEEecCCC-EEE
Q psy10566 341 KTLEGHTLGVAYLAWSPD-SSHLLVVGPEDCHELWVWNIET----------ELLRVKLNHSPEDSLTSCSWNRDGT-KFV 408 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd-~~~l~s~~~d~~~~i~vwd~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 408 (604)
.....|.+.|++++|+|+ +.++++++.++ .|++||+.+ ......+. .|...|.+++|+|++. +|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg--~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSS--DVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSS--CEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCC--cEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEE
Confidence 445569999999999997 67888888888 899999986 44445554 6788999999999988 999
Q ss_pred EEecCCeEEEEEcCC-C----e---eeeeece--eEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCc---ccc-cccCCC
Q psy10566 409 CGGIRGQFYQCDIEG-Q----V---LDSWEGV--RVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLT---DSN-LLQEDH 473 (604)
Q Consensus 409 s~~~dg~i~iwd~~~-~----~---~~~~~~~--~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~---~~~-~~~~~~ 473 (604)
+|+.||.|++||+.. . . ...+.+| .|.+++|+| ++..+++++.|+.|++||+++.. ... ...+..
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 999999999999954 1 1 2334444 699999999 67889999999999999999762 322 335788
Q ss_pred CeeEEEECCCCC-EEEEEecCCeEEEEecCC-CceeeEeeccccceEEEEeeeCCCCC-cEEEEEeCCCcEEEEeCCC--
Q psy10566 474 PVMSFTIDATDR-LALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQ-DFVASGSEDGKVYIWHVKR-- 548 (604)
Q Consensus 474 ~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~-- 548 (604)
.|.+++|+|++. ++++++.||.|++||+++ ..++..+.+|...+.. +.++|++ .++++++.||.|+|||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~---i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ---VQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEE---EEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEE---EEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 999999999997 688999999999999998 5678888888775444 4556877 5799999999999999986
Q ss_pred ------------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 549 ------------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 549 ------------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+++..+.+|...|++++|+|++..+|++++.||.|+||++...
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 36677888999999999999994449999999999999998753
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=263.66 Aligned_cols=267 Identities=12% Similarity=0.065 Sum_probs=209.9
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC-------
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE------- 379 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~------- 379 (604)
..+.+++.+|++|+.||+|++||+. ..+.+..+. ...|.++.|+|+ +++++.|+ +|++|+..
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~----~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~--~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLK----DSKTITTIT--TPNPRTGGEHPA---IISRGPCN--RLLLLYPGNQITILD 110 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEES----SSSCEEEEE--EECCCTTCCCCS---EEEECSTT--EEEEEETTTEEEEEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECC----CCcEEEEEe--cCCceeeeeCCc---eEEecCCC--eEEEEEccCceEEee
Confidence 4556788899999999999999998 333344443 467888899998 89999998 89999655
Q ss_pred --CceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEcC-CCeeeeeec---eeEEEEEEcCCCCEEEEEeC
Q psy10566 380 --TELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDIE-GQVLDSWEG---VRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 380 --~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~ 451 (604)
++..+......|...|.+++|+| +++++++++.||.|++||++ ++.+..... ..+.+++|+|++.++++|+.
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 55556666666778899999999 99999999999999999995 555444422 26999999999999999999
Q ss_pred CCeEEEEEcCCCccc--cccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE--eeeCC
Q psy10566 452 HHRIRTYNFEHLTDS--NLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH--SCFGG 526 (604)
Q Consensus 452 dg~I~i~d~~~~~~~--~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~--~~~~~ 526 (604)
||.|++||+++.... .+.. |..+|.+++|+|++.++++++ ++.|++||+++++.+..+..+......+. ++.++
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEEC
Confidence 999999999988765 3444 789999999999999999999 55999999999887766654322222222 36668
Q ss_pred CCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcC---CCCcEEEEEeCCCcEEEECCC
Q psy10566 527 ANQDFVASGSE-DGKVYIWHVKRELPIATLSGHTRTVSCVAWNP---VYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 527 ~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp---~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|++++|++++. |+.|+||++.+....... .++..++|+| + ...+++++.||.++++-..
T Consensus 270 ~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 270 DSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTAD-FTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CC-CCEEEEEEETTEEEEEEEC
T ss_pred CCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccc-cceeEEEecCCceEEEEec
Confidence 99999999998 999999999766544443 5678888988 6 6788999999999987543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=271.57 Aligned_cols=239 Identities=8% Similarity=0.079 Sum_probs=194.9
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc--eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
+..+..+|++++|+|++++|++++.|+ .|++||+.++ .....+. .|...|.+++|+|++++|++++.|+.|++||
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATN--QVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSS--CBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCC--EEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 334677999999999999999999998 8999999988 4444444 7889999999999999999999999999999
Q ss_pred cCCC----eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----cccccc-CCCCeeEEEECCCCCEEEE
Q psy10566 421 IEGQ----VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT----DSNLLQ-EDHPVMSFTIDATDRLALL 489 (604)
Q Consensus 421 ~~~~----~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~----~~~~~~-~~~~i~~~~~s~~~~~l~~ 489 (604)
+... ....+.++ .|.+++|+|+++.+++++.|+.|++||+++.. ...+.. |...|.+++|+|+++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 9543 34444444 79999999999999999999999999999875 233334 7889999999999999999
Q ss_pred EecCCeEEEEecC------------------CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 490 NVSTQGVHLWDLR------------------DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 490 ~~~dg~I~lwd~~------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
++.|+.|++||+. .++++..+ +|... +.++.++|++++|++|+.||.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW---VHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS---EEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce---EEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 9999999999995 34455555 66664 44456679999999999999999999999988
Q ss_pred ----eEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 552 ----IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 552 ----~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+..+.+|...|.+++|+|+ +.+|+++++|+.+ +|+..
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANE-SAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEET-TEEEEEESSSSEE-EECCC
T ss_pred cceeeEeecCCCCceEEEEEcCC-CCEEEEEcCCcEE-EEEeC
Confidence 8889999999999999999 7899998877766 66655
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=256.46 Aligned_cols=242 Identities=14% Similarity=0.206 Sum_probs=208.6
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce----EEEEecCCCCCCeEEEEEecCCC-EEEEEecCCe
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL----LRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQ 415 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~ 415 (604)
....+|...|.+++|+|++++|++++.|+ .|++||+.++. ..... .|...|.+++|+|+++ ++++|+.||.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~--~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDG--SLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTS--EEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCC--eEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCCCe
Confidence 34557999999999999999999999998 89999998876 33333 5788999999999999 9999999999
Q ss_pred EEEEEc-CCCeeeeeec--e--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC---------CcccccccCCCCeeEEEEC
Q psy10566 416 FYQCDI-EGQVLDSWEG--V--RVNCLWCRSDGKSVLAADTHHRIRTYNFEH---------LTDSNLLQEDHPVMSFTID 481 (604)
Q Consensus 416 i~iwd~-~~~~~~~~~~--~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~---------~~~~~~~~~~~~i~~~~~s 481 (604)
|++||+ .......+.+ + .|.+++|+| ++.+++++.|+.|++||+++ .+....+.+...+.+++|+
T Consensus 81 i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN 159 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC
T ss_pred EEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec
Confidence 999999 8766677766 5 699999999 99999999999999999987 6666666788999999999
Q ss_pred CCCCEEEEEecCCeEEEEecCC-Ccee--eEeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCC------cc
Q psy10566 482 ATDRLALLNVSTQGVHLWDLRD-RILL--RKFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRE------LP 551 (604)
Q Consensus 482 ~~~~~l~~~~~dg~I~lwd~~~-~~~~--~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~------~~ 551 (604)
|++ +++++.++.|++||+++ +... .....+.. .+.++.++| +++++++|+.||.|++|++... +.
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~ 234 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY---QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSS---CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTT
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCC---ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccc
Confidence 887 99999999999999998 5432 23334444 344556678 9999999999999999999887 88
Q ss_pred eEEeeCCCC---------CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 552 IATLSGHTR---------TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 552 ~~~l~~h~~---------~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...+.+|.. .|++++|+|+ +.+|++++.||.|++||+.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTTE
T ss_pred ceeeecccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccHh
Confidence 889988865 9999999999 7899999999999999998765
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=268.11 Aligned_cols=246 Identities=15% Similarity=0.214 Sum_probs=200.8
Q ss_pred EeccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEECCCceEEEEe-cCCCCCCeEEEEEec-CCCEEEEEecCCeEEE
Q psy10566 342 TLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWNIETELLRVKL-NHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQ 418 (604)
Q Consensus 342 ~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i 418 (604)
...+|...|++|+|+| ++.+|++|+.|| .|++||+.++.....+ ..+|.+.|++++|+| ++.+|++|+.||+|++
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg--~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGG--DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTS--CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCC--EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4456888999999999 466899999998 8999999887644333 247889999999998 7899999999999999
Q ss_pred EEcCCCeeeeeece-----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCC-EEEEEec
Q psy10566 419 CDIEGQVLDSWEGV-----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR-LALLNVS 492 (604)
Q Consensus 419 wd~~~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~ 492 (604)
||+++.....+..+ .+.+++|+++++++++|+.||.|++||++......+..|...|.+++|+|++. ++++++.
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 99987766655432 46789999999999999999999999998877666777899999999999986 6778999
Q ss_pred CCeEEEEecCCCceeeEe---eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC------Cee
Q psy10566 493 TQGVHLWDLRDRILLRKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR------TVS 563 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~------~V~ 563 (604)
|+.|++||+++.+....+ .+|.. .|.++.++|+|++|++|+.||.|+|||+.++.....+..|.. .+.
T Consensus 272 d~~v~iwd~~~~~~~~~~~~~~~h~~---~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLYSLPHRH---PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSBCCBCSS---CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred cceeeEEecccccccceEEEeeeccc---cccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 999999999987655444 34554 456677789999999999999999999999998888877643 234
Q ss_pred EEEEcCCCCcEEEEEe------------CCCcEEEECCCCCC
Q psy10566 564 CVAWNPVYHQMIASVS------------DDCTVRIWGPHLNT 593 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s------------~Dg~I~iW~~~~~~ 593 (604)
...|+|+ +.++++++ +++.|++||..++.
T Consensus 349 ~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 349 KAAWHPR-YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp BCEECSS-SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred EEEEcCC-CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 5677777 45555543 34679999998875
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-30 Score=261.28 Aligned_cols=247 Identities=12% Similarity=0.103 Sum_probs=195.8
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEE-----------ECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCC
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATG-----------SKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPD 358 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasg-----------s~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd 358 (604)
..|.+|.+.|.++++++ ..+++| +.|+++++|++.............. .+...+.+++||||
T Consensus 67 ~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 35788999999887764 455554 4678899999875444444333332 24456899999999
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee----eceeE
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW----EGVRV 434 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~v 434 (604)
|+++++++.+..++|++||+.+++.+..+. |...|.+++|+|+|+++++++.++.+.+|..++..+... +...+
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCE
Confidence 999987765433499999999999988876 567799999999999999999776665555566655432 23479
Q ss_pred EEEEEcCCCCEEEEEeCCC----eEEEEEcCCCcc-----cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 435 NCLWCRSDGKSVLAADTHH----RIRTYNFEHLTD-----SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~dg----~I~i~d~~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
.+++|+|+++.+++++.++ .++.|++..... .....+..+|++++|+|+|++|++|+.|++|+|||+++++
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence 9999999999999999887 688898876533 2334567899999999999999999999999999999999
Q ss_pred eeeEe-eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 506 LLRKF-QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 506 ~~~~~-~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
++..+ .+|... |.++.|+|+|++||+||.|++|+|||+..
T Consensus 303 ~~~~~~~gH~~~---V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 303 MSKIFKQAHSFA---ITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEETTSSSSC---EEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEEecCcccCC---EEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99886 678875 44556689999999999999999999964
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-29 Score=261.25 Aligned_cols=286 Identities=9% Similarity=0.094 Sum_probs=233.0
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeE-----EeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK-----TLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~-----~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
+.+..+..| ..+.+++|+|++.++++++.|+.|++||+. +.+... .+.+|...|.+++|+|++..+++++
T Consensus 114 ~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~----~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 188 (433)
T 3bws_A 114 RFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDIN----SGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM 188 (433)
T ss_dssp EEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETT----TCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG
T ss_pred eEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECC----CCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC
Confidence 444555555 446699999988888888889999999998 233333 4557889999999999999999999
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDG 443 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g 443 (604)
.++ .|++||+.+++....+. .+...+.+++|+|+++.+++++ .++.|++||+. ++.+..+..+ .+.+++++|++
T Consensus 189 ~d~--~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 189 QAN--AVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDG 265 (433)
T ss_dssp GGT--EEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTS
T ss_pred CCC--EEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCC
Confidence 888 89999999998887776 5677899999999999886554 79999999994 5555555443 68999999999
Q ss_pred CEEEEEe--------CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEE-EEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 444 KSVLAAD--------THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA-LLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 444 ~~l~~~~--------~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
+.+++++ .|+.|++||+.+.+......+...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+.. .
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~ 344 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-F 344 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-S
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-C
Confidence 9999988 5889999999988777666666789999999999765 5558899999999999988877763 3
Q ss_pred cceEEEEeeeCCCCCcEEEEEeC---------------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSE---------------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~---------------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
.. +..+.++|+++++++++. ||.|++||..+++.+..+..+ ..+.+++|+|+ +.+|++++
T Consensus 345 ~~---~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~~~~ 419 (433)
T 3bws_A 345 DK---PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPD-NRYLVISD 419 (433)
T ss_dssp SS---EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTT-SCEEEEEE
T ss_pred CC---CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCC-CCEEEEEE
Confidence 32 334566799998888876 579999999999999888864 57899999999 67777665
Q ss_pred -CCCcEEEECCCC
Q psy10566 580 -DDCTVRIWGPHL 591 (604)
Q Consensus 580 -~Dg~I~iW~~~~ 591 (604)
.|+.|++|+++.
T Consensus 420 ~~d~~i~v~~~~~ 432 (433)
T 3bws_A 420 FLDHQIRVYRRDG 432 (433)
T ss_dssp TTTTEEEEEEETT
T ss_pred CCCCeEEEEEecC
Confidence 599999999864
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=262.90 Aligned_cols=238 Identities=18% Similarity=0.295 Sum_probs=199.8
Q ss_pred CCCcEEEEEEcCC----CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCceEEE
Q psy10566 300 HCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELW 374 (604)
Q Consensus 300 H~~~V~~v~fspd----g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~ 374 (604)
|...|++++|+|+ |.+|++|+.||.|++||+. +.+.+..+.+|...|.+++|+| ++.+|++++.|+ .|+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg--~i~ 141 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI----TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDH--ALR 141 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT----TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTS--CEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch----hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCC--eEE
Confidence 6688999999999 6799999999999999998 4566788889999999999999 899999999998 899
Q ss_pred EEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeee----------------------
Q psy10566 375 VWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSW---------------------- 429 (604)
Q Consensus 375 vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~---------------------- 429 (604)
+||+.+++....+. ..|...|.+++|+|+++++++++.||.|++||+.. +....+
T Consensus 142 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 142 LWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp EEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred EEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 99999999888773 46888999999999999999999999999999953 222111
Q ss_pred --------eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc---------------cccccCCCCeeEEEECCC--C
Q psy10566 430 --------EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD---------------SNLLQEDHPVMSFTIDAT--D 484 (604)
Q Consensus 430 --------~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~---------------~~~~~~~~~i~~~~~s~~--~ 484 (604)
....|.+++|+ ++.+++++.|+.|++||+.+... .....+...|.+++|+|+ +
T Consensus 222 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 299 (366)
T 3k26_A 222 PDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ 299 (366)
T ss_dssp CSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS
T ss_pred CccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC
Confidence 22368889998 78999999999999999987543 112235677899999999 9
Q ss_pred CEEEEEecCCeEEEEecCCCceee----Eeecc--ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 485 RLALLNVSTQGVHLWDLRDRILLR----KFQGV--TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 485 ~~l~~~~~dg~I~lwd~~~~~~~~----~~~~~--~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+++++++.||.|++||+.+++... .+.+| .. .+..+.++|++++|++|+.||.|++||+.+
T Consensus 300 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 300 KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGA---AIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCS---CEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cEEEEEecCCcEEEEECCCCCCccccceEEcccccCC---ceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 999999999999999999886543 66666 34 345566679999999999999999999853
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-29 Score=247.10 Aligned_cols=243 Identities=19% Similarity=0.277 Sum_probs=207.1
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
..+....+.+|...|.+++| |++++|++++.|+ .|++||+.++.....+. .|...|.+++|+|+++++++++.||.
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg--~v~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDG--TVRLWSKDDQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTS--EEEEEEESSSEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTSC
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCC--cEEEEECCCCEEEEEee-cCCccEEEEEECCCCCEEEEecCCCe
Confidence 34677889999999999999 9999999999998 89999999988777665 57889999999999999999999999
Q ss_pred EEEEEcC----CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-CCCEEE
Q psy10566 416 FYQCDIE----GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-TDRLAL 488 (604)
Q Consensus 416 i~iwd~~----~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~ 488 (604)
|++|++. ++.+..+.++ .+.++.+ +++.+++++.|+.|++|| ..........+..++.++.+.| ++..++
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 9999984 2445556555 6888888 688999999999999999 3333334445788999999988 899999
Q ss_pred EEecCCeEEEEecCCCceeeEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
+++.|+.|++|| .......+.. +... +.++.+++++. +++|+.||.|++||+++++++..+.+|.+.|++++|
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~---i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDV---VRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSC---EEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEECCCCEEEEe--cCceEEEEeccCccc---EEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEE
Confidence 999999999999 4556666766 5554 34455568887 999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 568 NPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 568 sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|+ + .|++++.||.|++||+.+++
T Consensus 234 ~~~-~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 234 LPN-G-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp CTT-S-CEEEEETTSEEEEECTTTCC
T ss_pred ecC-C-CEEEEecCCEEEEEECCCCc
Confidence 999 5 58899999999999998875
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-30 Score=258.33 Aligned_cols=245 Identities=15% Similarity=0.176 Sum_probs=200.6
Q ss_pred ccCCCcEEEEEEcCC---CCeEEEEECCCeEEEEEeCCCCceeE-eeEEeccCCCCeeEEE------ECCCCCeEEEEeC
Q psy10566 298 NDHCDEVWFCKFSPD---GLKLATGSKDTTVIIWDVDPVTFTCQ-HRKTLEGHTLGVAYLA------WSPDSSHLLVVGP 367 (604)
Q Consensus 298 ~~H~~~V~~v~fspd---g~~lasgs~dg~i~iwd~~~~~~~~~-~~~~l~~h~~~V~~l~------~spd~~~l~s~~~ 367 (604)
.+|.+.|.+++|+|+ |.+|++|+.||.|++||+. ... ....+.+|...|.+++ |+|++++|++++.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE----APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT----SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC----CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC
Confidence 379999999999999 6999999999999999998 333 5678889999999995 5789999999999
Q ss_pred CCceEEEEEECCCce-EEEEecC---CCCCCeEEEE----EecCCCEEEEEecCCeEEEEEcCCCeeeeeec--eeEEEE
Q psy10566 368 EDCHELWVWNIETEL-LRVKLNH---SPEDSLTSCS----WNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG--VRVNCL 437 (604)
Q Consensus 368 d~~~~i~vwd~~~~~-~~~~~~~---~~~~~v~~~~----~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~v~~l 437 (604)
|+ .|++||+.++. ....+.. .....+.+++ |+|++.++++++.||.|++||++......... ..+.++
T Consensus 138 d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~ 215 (357)
T 3i2n_A 138 DG--TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSL 215 (357)
T ss_dssp TS--CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred CC--eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEE
Confidence 98 89999999886 4555432 1234788988 78899999999999999999996544433333 379999
Q ss_pred EEcC---CCCEEEEEeCCCeEEEEEcCCCcccccc------cCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCCC---
Q psy10566 438 WCRS---DGKSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRDR--- 504 (604)
Q Consensus 438 ~~s~---~g~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~--- 504 (604)
+|+| ++..+++++.||.|++||+++......+ .+...|.+++|+|++. ++++++.||.|++||++++
T Consensus 216 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 216 EFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred EcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 9999 9999999999999999999886654433 5788999999999998 8999999999999999864
Q ss_pred ----------------ceeeEeeccccceEEEEeeeCCCCCcEEE-EEeCCCcEEEEeCCCCcc
Q psy10566 505 ----------------ILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 505 ----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs~dg~I~iwd~~~~~~ 551 (604)
+.+..+.+|... +..+.++|++++|+ +|+.||.|++||+.+.+.
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLSTQP---ISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECCSSC---EEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccCCCCccccccccceeeccccCCCC---eeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 345666777664 44556679999888 899999999999987654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-28 Score=251.25 Aligned_cols=266 Identities=11% Similarity=0.073 Sum_probs=218.8
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeE-EEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL-LVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l-~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
.++++++.|+.|++||+. ..+....+..|. .+.+++|+|+++++ ++++.++ .|++||+.+++....+...
T Consensus 3 ~l~vs~~~d~~v~v~d~~----~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~--~i~v~d~~~~~~~~~~~~~-- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVT----SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSN--DVSIIDTATNNVIATVPAG-- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETT----TTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGT--EEEEEETTTTEEEEEEECS--
T ss_pred EEEEEcCCCCEEEEEECC----CCeEEEEeecCC-CcceEEECCCCCEEEEECCCCC--eEEEEECCCCeEEEEEECC--
Confidence 468889999999999998 455667777665 48999999999987 4555677 8999999999988887643
Q ss_pred CCeEEEEEecCCCEEEEEe-cCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCccccc
Q psy10566 393 DSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDGKSV-LAADTHHRIRTYNFEHLTDSNL 468 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g~~l-~~~~~dg~I~i~d~~~~~~~~~ 468 (604)
..+.+++|+|+++++++++ .++.|++||+. ++.+..+..+ .+.+++|+|+++.+ ++++.++.|++||+.+.+....
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 3899999999999886554 67999999995 5555555443 68999999999987 6778899999999998877777
Q ss_pred ccCCCCeeEEEECCCCCEE-EEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe---CCCcEEEE
Q psy10566 469 LQEDHPVMSFTIDATDRLA-LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS---EDGKVYIW 544 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l-~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs---~dg~I~iw 544 (604)
+.....+.+++|+|+++.+ ++++.++.|++||+++++.+..+..+. .+..+.++|+++++++++ .++.|++|
T Consensus 154 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 154 VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA----APSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS----EEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred EecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC----CccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 7767788999999999988 566778999999999998887776432 334456679999999888 68999999
Q ss_pred eCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 545 HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|+.+++.+..+..|. .+.+++|+|++..++++++.|+.|++||+.+++
T Consensus 230 d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 230 DTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp ETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 999999999988775 479999999944455788999999999998764
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-29 Score=255.49 Aligned_cols=281 Identities=16% Similarity=0.179 Sum_probs=195.8
Q ss_pred ccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC---CeEEEEeCCCceEE
Q psy10566 298 NDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS---SHLLVVGPEDCHEL 373 (604)
Q Consensus 298 ~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~---~~l~s~~~d~~~~i 373 (604)
.+|.+.|.+++|+| ++.+|++++.||.|++||+. .......+. +...+.++.|+|.+ .++++++.++ .|
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v 168 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN----TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGP--KV 168 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETT----TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSS--SE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCC----CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCC--eE
Confidence 46999999999999 77899999999999999998 344445554 77889999999854 4899999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcCCC--eeeee-----------------ecee
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIEGQ--VLDSW-----------------EGVR 433 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~--~~~~~-----------------~~~~ 433 (604)
++||+.++.....+. .|...|.+++|+|++. .+++++.||.|++||+... .+..+ ....
T Consensus 169 ~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 169 QLCDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp EEEESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred EEEeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 999999998877776 6788999999999998 5889999999999999422 22222 1236
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
|.+++|+|+++++++++.|+.|++||+.+......... ...+........+..+++++.++.|++||+.+++.+
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 99999999999999999999999999998765433221 122223333445567777888999999999999999
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
..+.+|...+.. +.++|++++|++|+.||.|++||+.+++++.....+. ....+.|.....+.+++.|+.+++|
T Consensus 328 ~~~~~~~~~v~~---~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W 401 (408)
T 4a11_B 328 TMLKGHYKTVDC---CVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSSSDEEGGTSAW 401 (408)
T ss_dssp EEECCCSSCEEE---EEEETTTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred eeeccCCCeEEE---EEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecccCccCceeec
Confidence 999999875444 5557999999999999999999999998876655443 2234555435667788889999999
Q ss_pred CCCCC
Q psy10566 588 GPHLN 592 (604)
Q Consensus 588 ~~~~~ 592 (604)
+....
T Consensus 402 ~~~~~ 406 (408)
T 4a11_B 402 SHPQF 406 (408)
T ss_dssp -----
T ss_pred CCccc
Confidence 87653
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=261.94 Aligned_cols=255 Identities=18% Similarity=0.287 Sum_probs=209.5
Q ss_pred cceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCce---eEeeEEeccCCCCeeEEEECCCC-CeEEEEe
Q psy10566 292 ETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFT---CQHRKTLEGHTLGVAYLAWSPDS-SHLLVVG 366 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~ 366 (604)
.....+.+|.+.|++++|+| ++.+||+|+.||+|+|||+...... ......+.+|...|.+++|+|++ ..|++++
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc
Confidence 45567889999999999999 9999999999999999999832111 14567888999999999999998 6899999
Q ss_pred CCCceEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeee-ece---eEEEEEEc
Q psy10566 367 PEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSW-EGV---RVNCLWCR 440 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~-~~~---~v~~l~~s 440 (604)
.|+ .|++||+.+++....+. ..|...|.+++|+|++++|++++.||.|++||++ ++.+..+ ..+ .+.++.|+
T Consensus 152 ~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 152 CDN--VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV 229 (402)
T ss_dssp TTS--CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC
T ss_pred CCC--EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc
Confidence 998 89999999999888884 4788999999999999999999999999999995 5666666 444 38899999
Q ss_pred CCCCEEEEE---eCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCce-eeEeec
Q psy10566 441 SDGKSVLAA---DTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRIL-LRKFQG 512 (604)
Q Consensus 441 ~~g~~l~~~---~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~-~~~~~~ 512 (604)
|++..++++ +.++.|++||+++... .....+...+.+++|+|++++++++ +.|+.|++||+.+++. +..+..
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE
T ss_pred CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc
Confidence 999999999 7999999999988654 2223467789999999999999754 4799999999999874 555555
Q ss_pred cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
+.. ...+..+.++|++.++++ .++.+++|++.+++.
T Consensus 310 ~~~-~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 310 FSS-KESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp ECC-SSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ccc-CCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 431 113444556789988775 567999999987654
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-29 Score=262.09 Aligned_cols=242 Identities=14% Similarity=0.183 Sum_probs=198.6
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-----------EEEEecCCCC------------CCeEEEEEec
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-----------LRVKLNHSPE------------DSLTSCSWNR 402 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-----------~~~~~~~~~~------------~~v~~~~~~~ 402 (604)
|.+.|++++|+|++++|++++.|+ .|++||+.++. ....+. +|. ..|.+++|+|
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGG--RVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTS--EEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCC--eEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcC
Confidence 678999999999999999999998 89999998876 344554 676 7899999999
Q ss_pred CC--CEEEEEecCCeEEEEEcCCCee----------------------------------------eee-ece--eEEEE
Q psy10566 403 DG--TKFVCGGIRGQFYQCDIEGQVL----------------------------------------DSW-EGV--RVNCL 437 (604)
Q Consensus 403 ~~--~~l~s~~~dg~i~iwd~~~~~~----------------------------------------~~~-~~~--~v~~l 437 (604)
++ ..+++++.|+.|++||+..... ..+ .+| .|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 7999999999999999853111 111 233 69999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCC-Ccccc--------cccCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCce-
Q psy10566 438 WCRSDGKSVLAADTHHRIRTYNFEH-LTDSN--------LLQEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRIL- 506 (604)
Q Consensus 438 ~~s~~g~~l~~~~~dg~I~i~d~~~-~~~~~--------~~~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~- 506 (604)
+|+|+++.++++ .|+.|++||+.. ..... ...+...|.+++|+|++ .++++++.||.|++||+++++.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 799999999984 32222 34678899999999998 9999999999999999999886
Q ss_pred ---eeEeeccccce---------EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-CcceEEeeCCCCC------------
Q psy10566 507 ---LRKFQGVTQGQ---------FTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRT------------ 561 (604)
Q Consensus 507 ---~~~~~~~~~~~---------~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~~~------------ 561 (604)
+..+.++.... ..+.++.++|++++|++++. |.|++||+++ ++++..+.+|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 67777765410 03455666799999999999 9999999997 8999999988642
Q ss_pred ---eeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 562 ---VSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 562 ---V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+..++|+|+ +.+|++|+.||.|++||+.+++
T Consensus 342 i~~~~~~~~s~~-~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 342 IFDKFECCWNGS-DSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp GGCCCCEEECTT-SSEEEEECSTTEEEEEETTTCC
T ss_pred cccceEEEECCC-CCEEEEeccCCEEEEEEcCCCc
Confidence 334999999 8899999999999999998775
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-28 Score=242.85 Aligned_cols=262 Identities=16% Similarity=0.208 Sum_probs=215.7
Q ss_pred ccCccccccccCcCcCCCCccceee--cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQV--LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~--l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.|....+||... .++++. +.+|...|++++|+|+|++||+|+.||+|+||++. +.+.+..+.+|...
T Consensus 42 g~D~tV~iWd~~t------g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~----~~~~~~~~~~h~~~ 111 (318)
T 4ggc_A 42 ALDNSVYLWSASS------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ----QQKRLRNMTSHSAR 111 (318)
T ss_dssp EETTEEEEEETTT------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EeCCEEEEEECCC------CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC----CceeEEEecCccce
Confidence 3466677787543 344444 45788899999999999999999999999999998 56778889999988
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ce---
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QV--- 425 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~--- 425 (604)
+.++.+ ++..+++++.++ .+++|+...+........+|...+..+.|.++++++++++.||.|++||+.. +.
T Consensus 112 ~~~~~~--~~~~l~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 187 (318)
T 4ggc_A 112 VGSLSW--NSYILSSGSRSG--HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 187 (318)
T ss_dssp EEEEEE--ETTEEEEEETTS--EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC
T ss_pred EEEeec--CCCEEEEEecCC--ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc
Confidence 877655 567899999998 8999999887655555557889999999999999999999999999999942 21
Q ss_pred -eeeee--ceeEEEEEEcCCCCEE---EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEE
Q psy10566 426 -LDSWE--GVRVNCLWCRSDGKSV---LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVH 497 (604)
Q Consensus 426 -~~~~~--~~~v~~l~~s~~g~~l---~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~ 497 (604)
..... ...+.++.+++++..+ ++++.++.|++||...........+...+..+.++|++..+++++ .|+.|+
T Consensus 188 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 188 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEE
Confidence 12222 2368899999977644 356678999999999988887788889999999999999988765 689999
Q ss_pred EEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
+||+++++++.++.+|...+. ++.++|++++|++|+.||+|+|||+....
T Consensus 268 iwd~~~~~~~~~l~gH~~~V~---~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTSRVL---SLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEETTTCCEEEEECCCSSCEE---EEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEECCCCcEEEEEcCCCCCEE---EEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999999988544 45667999999999999999999997654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-27 Score=246.75 Aligned_cols=289 Identities=15% Similarity=0.087 Sum_probs=230.1
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE- 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d- 368 (604)
.+....+.+|. .+.+++|+|+|+++ ++++.|++|++||+. +.+....+..+. .+.+++|+|+++++++++.+
T Consensus 22 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~----~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~ 95 (391)
T 1l0q_A 22 NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS 95 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECC----CCeEEEEEECCC-CccceEECCCCCEEEEEECCC
Confidence 35566777675 48999999999976 677789999999997 445566666554 89999999999988766654
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCCCE
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDGKS 445 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g~~ 445 (604)
+ .|++||+.+++....+. +...+.+++|+|+++.+ ++++.++.|++||+. ++.+..+..+ .+.+++|+|+++.
T Consensus 96 ~--~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 96 S--TLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTK 171 (391)
T ss_dssp T--EEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSE
T ss_pred C--EEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCE
Confidence 5 89999999999887776 34568999999999977 678889999999994 5655555543 6789999999998
Q ss_pred E-EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe---cCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 446 V-LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV---STQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 446 l-~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
+ ++++.++.|++||+.+.+....+.+...+.+++|+|+++++++++ .++.|++||+.+++.+..+..+.. +.
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----~~ 247 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD----PA 247 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS----EE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC----cc
Confidence 7 567788999999999988777777778899999999999999988 689999999999998888877653 23
Q ss_pred eeeCCCCCcEE-EEEeCCCcEEEEeCCCCcceEEeeCCCCCee---EEEEcC------------C--C-------CcEEE
Q psy10566 522 SCFGGANQDFV-ASGSEDGKVYIWHVKRELPIATLSGHTRTVS---CVAWNP------------V--Y-------HQMIA 576 (604)
Q Consensus 522 ~~~~~~~~~~l-~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~---~v~~sp------------~--~-------~~~l~ 576 (604)
.+.++|+++++ ++++.|+.|++||+.+++.+..+..|..+.. .+.+.| + . ...+.
T Consensus 248 ~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~ 327 (391)
T 1l0q_A 248 GIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFT 327 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEE
T ss_pred EEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEE
Confidence 35557999877 6778899999999999999998887754421 122222 1 0 14567
Q ss_pred EEeCCCcEEEECCCCCC
Q psy10566 577 SVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~~~ 593 (604)
+.+.|..+++|++..+.
T Consensus 328 ~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 328 DLSKDATEWKWDFGDGS 344 (391)
T ss_dssp ECCBSCSEEEEECSSSC
T ss_pred eCCCCceEEEEECCCCc
Confidence 77789999999997765
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-28 Score=237.20 Aligned_cols=285 Identities=12% Similarity=0.113 Sum_probs=191.9
Q ss_pred cceeecccCCC----cEEEEEEcCCCC---eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEE
Q psy10566 292 ETTQVLNDHCD----EVWFCKFSPDGL---KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV 364 (604)
Q Consensus 292 ~~~~~l~~H~~----~V~~v~fspdg~---~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s 364 (604)
+.+..|+...+ .|.++-|-.-|- .+++++ ...|++|+..+. ...+..+++.+|..+|..+.|.||...|++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 103 (356)
T 2w18_A 26 QLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDA-WQWEKLYTWHFAEVPVLQIVPVPDVYNLVC 103 (356)
T ss_dssp EEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSS-SBEEEEEEEECCSSCEEEECCCTTCCSCEE
T ss_pred eeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCC-ccceeeEEEeccCceeEEEEEcCcccceee
Confidence 33444444433 355666655443 677777 568999999843 355889999999999988888887655544
Q ss_pred EeCCC--ceEEEEEECCC-----ceEEEEecCCCCCCeEEEEEecCCCEEEEEe--cCCeEEEEEc--CCCeeeeeece-
Q psy10566 365 VGPED--CHELWVWNIET-----ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG--IRGQFYQCDI--EGQVLDSWEGV- 432 (604)
Q Consensus 365 ~~~d~--~~~i~vwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~- 432 (604)
..-.+ ...|+..-... +..... .++...|.++ ++++.+.+++ .|+.|++|++ +|+.+.....+
T Consensus 104 ~~~~~~~~~~v~sla~spd~~~~~~~l~s--~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~ 178 (356)
T 2w18_A 104 VALGNLEIREIRALFCSSDDESEKQVLLK--SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMP 178 (356)
T ss_dssp EEECSSSEEEEEEECC------CCEEEEE--EEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECC
T ss_pred eeeccccccceEEEEECCCccccccEEEe--CCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCC
Confidence 43322 01111111111 111111 1122223332 4444444433 4888888888 36666655444
Q ss_pred -eEEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCccccccc-C---CCCeeEEEECCCCCEE------------EEEec
Q psy10566 433 -RVNCLWCRS---DGKSVLAADTHHRIRTYNFEHLTDSNLLQ-E---DHPVMSFTIDATDRLA------------LLNVS 492 (604)
Q Consensus 433 -~v~~l~~s~---~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~---~~~i~~~~~s~~~~~l------------~~~~~ 492 (604)
.+..++|++ ++..+++++.|++|++||+.+++....+. + ...+.+++|+|++.++ ++|+.
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------C
T ss_pred CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 678888888 78999999999999999999988766664 2 2357788999999887 55778
Q ss_pred CCeEEEEecCCCceeeEee-----ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee-EEE
Q psy10566 493 TQGVHLWDLRDRILLRKFQ-----GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS-CVA 566 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~-~v~ 566 (604)
|++|++||..+++.+..+. +|.... +. .+.++.++++|+.||+|+|||+.+++++.++.+|...+. +++
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~--ls---g~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRF--LE---GDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK 333 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCE--EE---EEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCccee--Ec---cccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 8999999999998876652 444331 11 122367899999999999999999999999999987655 689
Q ss_pred EcCCCCcEEEEEeCCCcEEEECC
Q psy10566 567 WNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 567 ~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|+|+ +.+|+||+.|++|||||+
T Consensus 334 fSPD-G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 334 WSGT-DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ECSS-SSEEEEECTTSCEEEEEE
T ss_pred ECCC-CCEEEEEECCCcEEEecC
Confidence 9999 899999999999999985
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-28 Score=251.70 Aligned_cols=280 Identities=11% Similarity=0.052 Sum_probs=193.1
Q ss_pred EEEEE---cCCCCeEEEEECCCeEEEEEeCCCC------ceeEeeEEeccCCCCeeEEEE--------------------
Q psy10566 305 WFCKF---SPDGLKLATGSKDTTVIIWDVDPVT------FTCQHRKTLEGHTLGVAYLAW-------------------- 355 (604)
Q Consensus 305 ~~v~f---spdg~~lasgs~dg~i~iwd~~~~~------~~~~~~~~l~~h~~~V~~l~~-------------------- 355 (604)
.++.| +|++..|++++.|+.|.+|+..... .....+..+ .+..++..+.|
T Consensus 19 ~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (393)
T 4gq1_A 19 YTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGNVNSS 97 (393)
T ss_dssp EEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC----------C
T ss_pred eEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcceeec
Confidence 34445 4555445555568889999764211 111111111 23334444444
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEE----ecCCCCCCeEEEEEec--------CCCEEEEEecCCeEEEEEcC-
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVK----LNHSPEDSLTSCSWNR--------DGTKFVCGGIRGQFYQCDIE- 422 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~----~~~~~~~~v~~~~~~~--------~~~~l~s~~~dg~i~iwd~~- 422 (604)
++++.++++++.|+ +|++||..++..... ...+|.+.|.+++|+| |+++|++|+.|++|++||+.
T Consensus 98 ~~~~~~las~~~d~--~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQDN--TVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEETTS--CEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeCCC--cEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 44566899999998 899999998865432 2357999999999998 88999999999999999994
Q ss_pred CCeeeeeece--eEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCccccc--------------------------ccCCC
Q psy10566 423 GQVLDSWEGV--RVNCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDSNL--------------------------LQEDH 473 (604)
Q Consensus 423 ~~~~~~~~~~--~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~~--------------------------~~~~~ 473 (604)
+..+....++ .+.+++|+|++. .+++++.|+.|++||+++...... ..+..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 4444444333 799999999875 799999999999999987543211 12456
Q ss_pred CeeEEEEC-CCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE----------------EeeeCC-CCCcEEEEE
Q psy10566 474 PVMSFTID-ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI----------------HSCFGG-ANQDFVASG 535 (604)
Q Consensus 474 ~i~~~~~s-~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i----------------~~~~~~-~~~~~l~sg 535 (604)
.+.++.|+ ++++.+++++.|+++++||+..+.....+..+......+ ..++++ .++.++++|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 67888876 899999999999999999998877666665444322211 122332 345577888
Q ss_pred eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+.||.|++||+.+++++..+.+|..+|++++|+|+ +++||++++|| +.+|++
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspd-G~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQD-GSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTT-SSEEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCC-CCEEEEEeCCC-eEEEEE
Confidence 99999999999999999999999999999999999 89999999877 555544
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=262.27 Aligned_cols=243 Identities=14% Similarity=0.138 Sum_probs=201.0
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC-----CeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL-----GVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~-----~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
+|.+.|++|+|||||++||+++.||+|+|||.+ . ....+. |.. .|.+++|||||++|++++.|+ +|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~----~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG--tV 153 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN----K--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG--EL 153 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETT----E--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS--EE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC----c--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC--EE
Confidence 568899999999999999999999999999965 2 555666 665 599999999999999999999 89
Q ss_pred EEEECCCceE-------EEEe---cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee----eeee-ce--eEEE
Q psy10566 374 WVWNIETELL-------RVKL---NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL----DSWE-GV--RVNC 436 (604)
Q Consensus 374 ~vwd~~~~~~-------~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~-~~--~v~~ 436 (604)
++||+.++.. +..+ ..+|...|.+++|+|+| +++++.|+.|++||+.+... ..+. ++ .|.+
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 9999998852 4444 24678899999999999 88999999999999965443 2342 44 5999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCcc-cccccCCCCeeEEEE--CCCCCEEEEEecCCeEEEEecCCCceeeEeecc
Q psy10566 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTD-SNLLQEDHPVMSFTI--DATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg~I~i~d~~~~~~-~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~ 513 (604)
++|+ |+.+++++ +++|++||+.+... ....+|...+..+++ +|++..+++++.+|+ ++|....
T Consensus 232 vaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~---------- 297 (588)
T 2j04_A 232 LKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE---------- 297 (588)
T ss_dssp EEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS----------
T ss_pred EEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc----------
Confidence 9999 68888887 69999999998877 444478999999999 999999999999999 9999771
Q ss_pred ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
+ .++|++..+++. |+++++|+...+. +..+.+ ...|++++|+|+ +..+|+++.
T Consensus 298 ------~---~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPd-G~~lA~~~~ 350 (588)
T 2j04_A 298 ------L---HVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPD-GYSIAIVYD 350 (588)
T ss_dssp ------E---EEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTT-SSEEEEEEE
T ss_pred ------E---EECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCC-CCEEEEEEe
Confidence 1 135888777764 9999999976444 445554 677999999999 889998874
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-28 Score=253.37 Aligned_cols=250 Identities=17% Similarity=0.303 Sum_probs=204.4
Q ss_pred eeecccCCCcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCC------CceeEeeEEeccCCCCeeEEEECCCCC-eEEEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPV------TFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVV 365 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~------~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~ 365 (604)
...+.+|.+.|++++|+|+ +.+||+++.||.|+||++... .........+.+|...|.+++|+|++. +|+++
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3456789999999999997 679999999999999999721 112566788899999999999999998 99999
Q ss_pred eCCCceEEEEEECCCceE-------EEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCC----Ceeeeeece-
Q psy10566 366 GPEDCHELWVWNIETELL-------RVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEG----QVLDSWEGV- 432 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~-------~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~- 432 (604)
+.|+ .|++||+.++.. ...+ ..|...|.+++|+| ++..|++++.||.|++||++. +.+..+..+
T Consensus 201 ~~dg--~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 201 SDDH--TICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp CTTS--CEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred eCCC--eEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 9998 899999987321 1222 36888999999999 778999999999999999953 355555444
Q ss_pred -eEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCC-ccc-ccccCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCC----
Q psy10566 433 -RVNCLWCRSDGK-SVLAADTHHRIRTYNFEHL-TDS-NLLQEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRD---- 503 (604)
Q Consensus 433 -~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~-~~~-~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~---- 503 (604)
.|.+++|+|++. .+++++.||.|++||++.. ... ....+...|.+++|+|++. ++++++.|+.|++||+..
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 799999999987 6889999999999999874 333 3345789999999999995 688999999999999987
Q ss_pred ----------CceeeEeeccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCC
Q psy10566 504 ----------RILLRKFQGVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 504 ----------~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~ 549 (604)
...+..+.+|...+ ..+.++|++. ++++++.||.|+||++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v---~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKI---SDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCE---EEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCCCCCCc---eEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 24556666776644 4455678888 9999999999999998753
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-28 Score=245.31 Aligned_cols=253 Identities=14% Similarity=0.206 Sum_probs=203.3
Q ss_pred eeEeeEEeccCCCCeeEEEECCC---CCeEEEEeCCCceEEEEEECCC-ceEEEEecCCCCCCeEEEEEecCCCEEEEEe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPD---SSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd---~~~l~s~~~d~~~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 411 (604)
....+..+.+|...|++++|+|+ |++|++++.|+ .|++||+.+ +.........|...|.+++|+|++++|++++
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN--DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTS--EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCC--cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 44556788899999999999999 59999999998 899999997 5555344447889999999999999999999
Q ss_pred cCCeEEEEEcCCCeeeeeece--eEEEEEE--cCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEE
Q psy10566 412 IRGQFYQCDIEGQVLDSWEGV--RVNCLWC--RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA 487 (604)
Q Consensus 412 ~dg~i~iwd~~~~~~~~~~~~--~v~~l~~--s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l 487 (604)
.||.|++||++.........+ .|.+++| +++++.+++++.|+.|++||+++.+....+.....+.++.+.+ ..+
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~ 183 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY--PMA 183 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET--TEE
T ss_pred CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC--Cee
Confidence 999999999965544444444 7999999 8999999999999999999999988777777667777776664 588
Q ss_pred EEEecCCeEEEEecCCCceeeEee-c-cccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCC---cceEEeeCCCC-
Q psy10566 488 LLNVSTQGVHLWDLRDRILLRKFQ-G-VTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRE---LPIATLSGHTR- 560 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~~~~~~~~-~-~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~---~~~~~l~~h~~- 560 (604)
++++.++.+++||++......... . .......+....... ....+++|+.||.|++||+... ..+..+.+|..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 899999999999998764433222 1 122222332222111 2234999999999999999987 66888888876
Q ss_pred -----------CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 561 -----------TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 561 -----------~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|++++|+|+ +.+|++++.||.|++||+.++.
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~-~~~l~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDART 306 (368)
T ss_dssp ----CCCEEECCEEEEEECTT-TCCEEEEETTSCEEEEETTTTE
T ss_pred cccccccccccceEEEEEecC-CCEEEEEccCCeEEEEECCCCc
Confidence 7999999999 7899999999999999998764
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-27 Score=242.95 Aligned_cols=241 Identities=13% Similarity=0.108 Sum_probs=185.7
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEE-EEEecCC
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKF-VCGGIRG 414 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg 414 (604)
....+..+..|...|.+++|+|||++|++++.++ +++||+.++........ ..+..+++.++++.+ ++++.|+
T Consensus 8 ~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~---~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 8 TRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS---FEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp -----------CCCCCEEEECTTSSEEEEECSSE---EEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSSTT
T ss_pred ccCCccccccCCCceEEEEECCCCCEEEEEcCCE---EEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECCcc
Confidence 3445566788999999999999999999888765 78999998877665442 247888999988877 5677889
Q ss_pred eEEEEEc-CCCeeeeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-cccccccCCCCeeEEEECCCCCEEEE--
Q psy10566 415 QFYQCDI-EGQVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL-TDSNLLQEDHPVMSFTIDATDRLALL-- 489 (604)
Q Consensus 415 ~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~-- 489 (604)
.|++||. +++.+..+... .|.++.++++. +++ ..++.|++||+.+. +....+.. +...+++++ .++++
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~s 154 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSN 154 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEE
T ss_pred EEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeC
Confidence 9999998 46666665533 78999998764 333 34789999999887 44444433 555666777 56666
Q ss_pred EecCCeEEEEecCCCc----------------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc-EEEEeCCCCcce
Q psy10566 490 NVSTQGVHLWDLRDRI----------------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK-VYIWHVKRELPI 552 (604)
Q Consensus 490 ~~~dg~I~lwd~~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~-I~iwd~~~~~~~ 552 (604)
|+.+|.|++||+.++. .+..+.+|...+ .++.++|+|++|++|+.||+ |++||+.+++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v---~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI---KMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCE---EEEEECTTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce---EEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 5789999999999865 267888888854 44566799999999999998 999999999999
Q ss_pred EEee-C-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 553 ATLS-G-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 553 ~~l~-~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.++. + |...|++++|+|+ +.+|++++.|++|++||+....
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEECTTCCSCEEEEEECTT-SCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEcCCCCCcEEEEEECCC-CCEEEEEECCCEEEEEEccCCC
Confidence 9998 6 9999999999999 8999999999999999998764
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-28 Score=251.56 Aligned_cols=257 Identities=17% Similarity=0.299 Sum_probs=201.0
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+....+.+|.+.|++++| ++++|++|+.||+|++||+. +.+....+.+|...|.+++|++ ..+++++.|+
T Consensus 163 ~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg- 233 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN----TGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDR- 233 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS----SCCEEEEECCCCSCEEEEECCT--TEEEEEETTS-
T ss_pred CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC----CCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCC-
Confidence 5677889999999999999 78899999999999999998 5567788999999999999975 4899999998
Q ss_pred eEEEEEECCCceEEE--EecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCE
Q psy10566 371 HELWVWNIETELLRV--KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~ 445 (604)
.|++||+.++.... ....+|...|.+++| +++++++|+.||.|++||+ .++.+..+.++ .+.++.+ +++.
T Consensus 234 -~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~ 308 (435)
T 1p22_A 234 -SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRL 308 (435)
T ss_dssp -CEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTE
T ss_pred -cEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCE
Confidence 89999998876442 334478889999999 7889999999999999999 46777777766 5778777 5789
Q ss_pred EEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc---------eeeEeecccc
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI---------LLRKFQGVTQ 515 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~---------~~~~~~~~~~ 515 (604)
+++++.||.|++||++++.....+. +...|.++++ ++.++++++.||.|++||+.++. .+..+.+|..
T Consensus 309 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~ 386 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 386 (435)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC
Confidence 9999999999999999876655444 7788999998 78899999999999999998766 7788888888
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp 569 (604)
.+..+.. ++.+|++|+.||.|++||+.++....... ...+..++.|.+
T Consensus 387 ~v~~l~~-----~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~ 434 (435)
T 1p22_A 387 RVFRLQF-----DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYIS 434 (435)
T ss_dssp CCCCEEE-----CSSCEEECCSSSEEEEEC------------------------
T ss_pred CeEEEEe-----CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeeec
Confidence 6655532 67889999999999999998876554433 233455555543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-27 Score=234.39 Aligned_cols=226 Identities=16% Similarity=0.206 Sum_probs=182.8
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~ 347 (604)
..+.|....+|+.... ..+++.+|.+|.+.|++++|+|+ |++||+|+.|++|+|||+. .+.......+.+|.
T Consensus 26 s~s~D~~v~iw~~~~~----~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~--~~~~~~~~~~~~h~ 99 (297)
T 2pm7_B 26 TCSSDKTIKIFEVEGE----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE--NGRWSQIAVHAVHS 99 (297)
T ss_dssp EEETTSCEEEEEBCSS----CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS--SSCBCCCEEECCCS
T ss_pred EEeCCCEEEEEecCCC----CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC--CCceEEEEEeecCC
Confidence 3445667777775321 23467889999999999999874 8999999999999999998 33334566788899
Q ss_pred CCeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceE-EEEecCCCCCCeEEEEEecC-------------CCEEEEEe
Q psy10566 348 LGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELL-RVKLNHSPEDSLTSCSWNRD-------------GTKFVCGG 411 (604)
Q Consensus 348 ~~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~-------------~~~l~s~~ 411 (604)
..|.+++|+|+ +.+|++++.|+ +|++||+.++.. .......|...|.+++|+|+ +++|++|+
T Consensus 100 ~~v~~v~~~p~~~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs 177 (297)
T 2pm7_B 100 ASVNSVQWAPHEYGPMLLVASSDG--KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTS--EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEE
T ss_pred CceeEEEeCcCCCCcEEEEEECCC--cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc
Confidence 99999999998 88999999998 899999987632 11222368889999999997 57999999
Q ss_pred cCCeEEEEEcC-CC----eeeeeece--eEEEEEEcCCC---CEEEEEeCCCeEEEEEcCCCcc---ccc---ccCCCCe
Q psy10566 412 IRGQFYQCDIE-GQ----VLDSWEGV--RVNCLWCRSDG---KSVLAADTHHRIRTYNFEHLTD---SNL---LQEDHPV 475 (604)
Q Consensus 412 ~dg~i~iwd~~-~~----~~~~~~~~--~v~~l~~s~~g---~~l~~~~~dg~I~i~d~~~~~~---~~~---~~~~~~i 475 (604)
.|+.|++||++ +. ....+.+| .|.+++|+|++ .++++++.|++|++||+..... ... ..+...+
T Consensus 178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v 257 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 257 (297)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE
Confidence 99999999995 33 44566666 69999999985 8899999999999999987431 112 2456789
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
.+++|+|++++|++++.|+.|++|+...
T Consensus 258 ~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 258 WRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9999999999999999999999999763
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-26 Score=243.70 Aligned_cols=234 Identities=13% Similarity=0.169 Sum_probs=195.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce---EEEEecC-----------------------------------
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---LRVKLNH----------------------------------- 389 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~----------------------------------- 389 (604)
.++.+++|+|+|++|++++ ++ .|++||+.+|+ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~--~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KN--CILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TT--EEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CC--eEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 4789999999999666654 55 79999999988 4444331
Q ss_pred ------------------CCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcC---CCeeeeeec----eeEEEEEEcCCC
Q psy10566 390 ------------------SPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIE---GQVLDSWEG----VRVNCLWCRSDG 443 (604)
Q Consensus 390 ------------------~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~---~~~~~~~~~----~~v~~l~~s~~g 443 (604)
.+...|.+++|+|++++| ++++.||.|++||+. ++.+..+.. ..+.+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 123369999999999996 889999999999986 556666542 369999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCccc-----ccccCCCCeeEEEECCC---CCEEEEEecCCeEEEEecCCCceeeE-eeccc
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDS-----NLLQEDHPVMSFTIDAT---DRLALLNVSTQGVHLWDLRDRILLRK-FQGVT 514 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~-----~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~I~lwd~~~~~~~~~-~~~~~ 514 (604)
+.+++++.+|.|++|++.+.... ....+...|.+++|+|+ ++++++++.|+.|++||++++..+.. +.+|.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 99999999999999999876654 34457889999999999 99999999999999999999988877 45777
Q ss_pred cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-------------------------CCCeeEEEEcC
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-------------------------TRTVSCVAWNP 569 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-------------------------~~~V~~v~~sp 569 (604)
..+.. +.++ ++++|++|+.|+.|++||+.+++++..+..+ ...|.+++|+|
T Consensus 242 ~~v~~---~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 242 HFVSS---ICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp SCEEE---EEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CceEE---EEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 75444 4556 9999999999999999999999988888632 35799999999
Q ss_pred CCCcEEEEEe-CCCcEEEECC
Q psy10566 570 VYHQMIASVS-DDCTVRIWGP 589 (604)
Q Consensus 570 ~~~~~l~s~s-~Dg~I~iW~~ 589 (604)
+ +.+|++++ .|+.|++|++
T Consensus 318 ~-~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 N-LPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp S-SSEEEEEETTCSEEEEEEE
T ss_pred C-CCEEEEEECCCCeEEEEEe
Confidence 9 78888888 8999999999
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-27 Score=235.06 Aligned_cols=226 Identities=18% Similarity=0.198 Sum_probs=183.7
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~ 347 (604)
..+.|....+|+..... ...+..+.+|.+.|++++|+| ++++||+|+.|++|+|||+. ++.......+.+|.
T Consensus 30 sgs~D~~v~lwd~~~~~----~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~--~~~~~~~~~~~~h~ 103 (316)
T 3bg1_A 30 TCSSDRSVKIFDVRNGG----QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE--NGTWEKSHEHAGHD 103 (316)
T ss_dssp EEETTTEEEEEEEETTE----EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS--SSCCCEEEEECCCS
T ss_pred EEeCCCeEEEEEecCCC----cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC--CCcceEEEEccCCC
Confidence 34556677778753211 234678999999999999986 48999999999999999998 33334567788999
Q ss_pred CCeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceE--EEEecCCCCCCeEEEEEecC-----------------CCE
Q psy10566 348 LGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELL--RVKLNHSPEDSLTSCSWNRD-----------------GTK 406 (604)
Q Consensus 348 ~~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~-----------------~~~ 406 (604)
..|.+++|+|+ +.+|++++.|+ +|++||+.++.. .......|...|.+++|+|+ +++
T Consensus 104 ~~V~~v~~~p~~~g~~lasgs~D~--~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (316)
T 3bg1_A 104 SSVNSVCWAPHDYGLILACGSSDG--AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR 181 (316)
T ss_dssp SCCCEEEECCTTTCSCEEEECSSS--CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCB
T ss_pred CceEEEEECCCCCCcEEEEEcCCC--CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccce
Confidence 99999999998 78999999998 899999987632 22344578888999999997 478
Q ss_pred EEEEecCCeEEEEEcCC----Ceeeeeece--eEEEEEEcCCC----CEEEEEeCCCeEEEEEcCCCc-----ccccccC
Q psy10566 407 FVCGGIRGQFYQCDIEG----QVLDSWEGV--RVNCLWCRSDG----KSVLAADTHHRIRTYNFEHLT-----DSNLLQE 471 (604)
Q Consensus 407 l~s~~~dg~i~iwd~~~----~~~~~~~~~--~v~~l~~s~~g----~~l~~~~~dg~I~i~d~~~~~-----~~~~~~~ 471 (604)
|++|+.|+.|++||++. +.+..+.+| .|.+++|+|++ ..+++++.|++|++||+.+.. ......+
T Consensus 182 l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 261 (316)
T 3bg1_A 182 FASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF 261 (316)
T ss_dssp EECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC
T ss_pred EEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC
Confidence 99999999999999963 245566666 69999999986 889999999999999997631 1223346
Q ss_pred CCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
...|.+++|+|++.+|++++.|+.|++|+...
T Consensus 262 ~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 262 NDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp SSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 78999999999999999999999999999753
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-27 Score=239.64 Aligned_cols=227 Identities=11% Similarity=0.066 Sum_probs=184.2
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---------
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ--------- 424 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------- 424 (604)
.+.+++..+++++.|+ .|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.++.
T Consensus 43 ~~~~d~~~l~sg~~Dg--~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDG--ALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETT--EEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCC--cEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 4456788999999999 89999999998777765 356788889988 999999999999987532
Q ss_pred -eeeeee-c--eeEEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 425 -VLDSWE-G--VRVNCLWCRS--DGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 425 -~~~~~~-~--~~v~~l~~s~--~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
.+..+. + ..|.+++++| +++++++++.|+.|++||+++....... .+...+.+++|+|++.++++|+.||.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 233333 2 2599999999 9999999999999999999988765443 245579999999999999999999999
Q ss_pred EEEecCCCcee-eEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC---CCCCee--EEEEcC
Q psy10566 497 HLWDLRDRILL-RKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---HTRTVS--CVAWNP 569 (604)
Q Consensus 497 ~lwd~~~~~~~-~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~--~v~~sp 569 (604)
++||+++++.+ ..+.. |... +.++.++|++.+|++++ |+.|++||+++++.+..+.. |...+. +++|+|
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~---v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAK---IKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSC---EEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred EEEECCCCCCCccEEeccCCCC---EEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 99999999887 77887 7774 44556679999999999 55999999999887665554 444454 699999
Q ss_pred CCCcEEEEEeC-CCcEEEECCCCCC
Q psy10566 570 VYHQMIASVSD-DCTVRIWGPHLNT 593 (604)
Q Consensus 570 ~~~~~l~s~s~-Dg~I~iW~~~~~~ 593 (604)
+ +.+|++++. |+.|++|++....
T Consensus 271 ~-g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 271 S-GKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp T-SSEEEEEETTTTEEEEEEECTTT
T ss_pred C-CCEEEEecCCCCcEEEEEEcccc
Confidence 9 899999998 9999999986654
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=232.18 Aligned_cols=277 Identities=14% Similarity=0.108 Sum_probs=195.9
Q ss_pred ccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCc-----eeEeeEEec
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTF-----TCQHRKTLE 344 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~-----~~~~~~~l~ 344 (604)
+.+....+|+.... ..+.+....+.+|.+.|++++|+| |+++|++|+.||+|++||+..... .......+.
T Consensus 30 ~~dg~i~iw~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 30 SSDQHIKVFKLDKD--TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp ETTSEEEEEEECSS--SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred eCCCeEEEEECCCC--CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeec
Confidence 33556667765432 223356778899999999999999 699999999999999999984321 125678888
Q ss_pred cCCCCeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceEEEEec------------CCCCCCeEEEEEecC---CCEE
Q psy10566 345 GHTLGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELLRVKLN------------HSPEDSLTSCSWNRD---GTKF 407 (604)
Q Consensus 345 ~h~~~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~------------~~~~~~v~~~~~~~~---~~~l 407 (604)
+|...|.+++|+|+ +.++++++.|+ .|++||+.+++....+. ..+...+.+++|+|+ +..+
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDG--ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTC--EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCC--cEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEE
Confidence 99999999999999 99999999998 89999998875332211 246678999999997 9999
Q ss_pred EEEecCCeEEEEEcCCCe---eeeeece--eEEEEEEcCCC----CEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeE
Q psy10566 408 VCGGIRGQFYQCDIEGQV---LDSWEGV--RVNCLWCRSDG----KSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMS 477 (604)
Q Consensus 408 ~s~~~dg~i~iwd~~~~~---~~~~~~~--~v~~l~~s~~g----~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~ 477 (604)
++++.++.+.+|+..... +..+.+| .|.+++|+|++ +.+++++.||.|++||++......... .......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 265 (351)
T 3f3f_A 186 AVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNM 265 (351)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------
T ss_pred EEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceec
Confidence 999999999888875432 4455554 79999999998 899999999999999998754332221 1222223
Q ss_pred EEECCCCCEEEEE----ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE
Q psy10566 478 FTIDATDRLALLN----VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553 (604)
Q Consensus 478 ~~~s~~~~~l~~~----~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~ 553 (604)
...++.......+ .....+.+|+....+.+..+.+|...+ ..+.++|++++|++|+.||.|+|||+.+++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 266 FDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV---WSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp -------------------------CCSEEEEEEEEECTTSSCE---EEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred cCCCcccccccccccccccceeeeecccccccEEEEEecccccE---EEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 3333333333333 334456777777778888888888754 445667999999999999999999999886655
Q ss_pred Ee
Q psy10566 554 TL 555 (604)
Q Consensus 554 ~l 555 (604)
.+
T Consensus 343 ~~ 344 (351)
T 3f3f_A 343 CM 344 (351)
T ss_dssp EE
T ss_pred he
Confidence 44
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-25 Score=233.52 Aligned_cols=285 Identities=7% Similarity=0.005 Sum_probs=219.7
Q ss_pred CCCcEEEEE---EcCCCCeEEEEE--------------CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeE
Q psy10566 300 HCDEVWFCK---FSPDGLKLATGS--------------KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL 362 (604)
Q Consensus 300 H~~~V~~v~---fspdg~~lasgs--------------~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l 362 (604)
....+..++ |+|++..++..+ .++.+.||.++...........+..+ ..+.+++|+|++..+
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 445677788 888877655432 23333566555323344556666655 446699999966666
Q ss_pred EEEeCCCceEEEEEECCCceEEEEec----CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEE
Q psy10566 363 LVVGPEDCHELWVWNIETELLRVKLN----HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVN 435 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~ 435 (604)
++++.++ .|++||+.+++...... ..|...|.+++|++++..+++++.|+.|++||++ ++.+..+..+ .+.
T Consensus 138 ~~~~~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~ 215 (433)
T 3bws_A 138 IPLLEDE--GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK 215 (433)
T ss_dssp EEBTTSS--SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE
T ss_pred EEeCCCC--eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee
Confidence 6666665 79999999998876432 2567789999999999999999999999999995 5666666543 699
Q ss_pred EEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--------cCCeEEEEecCCCce
Q psy10566 436 CLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--------STQGVHLWDLRDRIL 506 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------~dg~I~lwd~~~~~~ 506 (604)
+++|+|+++.+++++ .++.|++||+.+++....+.....+.+++++|+++.+++++ .|+.|++||+.+++.
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 999999999886554 79999999999887777676677799999999999999988 488999999999887
Q ss_pred eeEeeccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC-----
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD----- 580 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~----- 580 (604)
+..+. +... +..+.++|+++ ++++++.|+.|++||+.+++.+..+. +...+.+++|+|+ +.++++++.
T Consensus 296 ~~~~~-~~~~---~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~d-g~~l~~~~~~~~~~ 369 (433)
T 3bws_A 296 IDTIG-PPGN---KRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPD-GKYLYVSCRGPNHP 369 (433)
T ss_dssp EEEEE-EEEC---EEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTT-SSEEEEEECCCCCT
T ss_pred Eeecc-CCCC---cceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCC-CCEEEEEecCCCcc
Confidence 76653 2222 33345578886 45677899999999999999888876 6778999999999 677776665
Q ss_pred ----------CCcEEEECCCCCC
Q psy10566 581 ----------DCTVRIWGPHLNT 593 (604)
Q Consensus 581 ----------Dg~I~iW~~~~~~ 593 (604)
||.|++||+.+++
T Consensus 370 ~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 370 TEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp TTCTTSCCSSCCEEEEEETTTTE
T ss_pred ccccccccccceEEEEEECCCCc
Confidence 5799999998764
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-26 Score=235.80 Aligned_cols=243 Identities=15% Similarity=0.080 Sum_probs=169.6
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce-eEeeEEeccCCCCeeEEEECC--------CCCeEEEEeC
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT-CQHRKTLEGHTLGVAYLAWSP--------DSSHLLVVGP 367 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~sp--------d~~~l~s~~~ 367 (604)
...|...+....+++++.+||+|+.|++|+|||+...... ......+.+|.+.|.+++|+| |+++|++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 3455666666677778889999999999999999833211 123445789999999999998 8899999999
Q ss_pred CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeee----------------
Q psy10566 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSW---------------- 429 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~---------------- 429 (604)
|+ +|++||+.++....... .|...|.+++|+|++. +|++++.||+|++||+. ++.....
T Consensus 165 D~--tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~ 241 (393)
T 4gq1_A 165 DC--TLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT 241 (393)
T ss_dssp TS--EEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEES
T ss_pred CC--eEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccc
Confidence 98 99999998887766665 4678899999999874 79999999999999984 2221111
Q ss_pred ---------ece--eEEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCC------------------eeEE
Q psy10566 430 ---------EGV--RVNCLWCR-SDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHP------------------VMSF 478 (604)
Q Consensus 430 ---------~~~--~v~~l~~s-~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~------------------i~~~ 478 (604)
.++ .+.++.|+ ++++.+++++.|+++++||+........+. +... ....
T Consensus 242 ~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
T 4gq1_A 242 LPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGA 321 (393)
T ss_dssp GGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCC
T ss_pred ccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeE
Confidence 011 35667765 899999999999999999997654332211 1111 1122
Q ss_pred EECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 479 TIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 479 ~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
.++| ++.++++|+.||.|++||+.++.....+.+|... |..+.|+|+|++||+++++| +.+|.+
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~---V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP---IVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC---EEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc---EEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 2333 3446677888999999999999988888877764 55567789999999999877 555554
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-25 Score=223.51 Aligned_cols=225 Identities=16% Similarity=0.200 Sum_probs=185.7
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCee
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~ 351 (604)
+....+|+... ...+....+.+|.+.|++++|+|+ +.+|++|+.||.|++||+. .........+.+|...|.
T Consensus 32 dg~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~ 105 (379)
T 3jrp_A 32 DKTIKIFEVEG----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE--NGRWSQIAVHAVHSASVN 105 (379)
T ss_dssp TSCEEEEEEET----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEE
T ss_pred CCcEEEEecCC----CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC--CCceeEeeeecCCCcceE
Confidence 44556666431 134567789999999999999987 9999999999999999998 444457788889999999
Q ss_pred EEEECCC--CCeEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEec-------------CCCEEEEEecCC
Q psy10566 352 YLAWSPD--SSHLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNR-------------DGTKFVCGGIRG 414 (604)
Q Consensus 352 ~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~-------------~~~~l~s~~~dg 414 (604)
+++|+|+ +.++++++.|+ .|++||+.++. ....+ ..|...|.+++|+| ++..+++++.||
T Consensus 106 ~~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 106 SVQWAPHEYGPLLLVASSDG--KVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp EEEECCGGGCSEEEEEETTS--EEEEEECCTTSCCCEEEE-ECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred EEEeCCCCCCCEEEEecCCC--cEEEEecCCCCceeeEEe-cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 9999999 99999999998 89999998873 22223 36788999999999 699999999999
Q ss_pred eEEEEEcC-CC----eeeeeece--eEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCcc------cccccCCCCeeEE
Q psy10566 415 QFYQCDIE-GQ----VLDSWEGV--RVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLTD------SNLLQEDHPVMSF 478 (604)
Q Consensus 415 ~i~iwd~~-~~----~~~~~~~~--~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~~------~~~~~~~~~i~~~ 478 (604)
.|++||+. +. ....+.+| .|.+++|+|+ ++++++++.||.|++||+..... .....+...+.++
T Consensus 183 ~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 262 (379)
T 3jrp_A 183 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRA 262 (379)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEE
T ss_pred eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEE
Confidence 99999994 32 33445444 6999999999 89999999999999999988631 1222367889999
Q ss_pred EECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 479 TIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 479 ~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
+|+|+++++++++.||.|++||+......
T Consensus 263 ~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 263 SWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred EEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 99999999999999999999999865443
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-24 Score=231.51 Aligned_cols=274 Identities=13% Similarity=0.094 Sum_probs=220.7
Q ss_pred EEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC--CCceEEE
Q psy10566 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI--ETELLRV 385 (604)
Q Consensus 308 ~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~--~~~~~~~ 385 (604)
+|+|++.++++++.|++|.+||.. +.+.+.++..+.. +.+++|+|||+++++++.++ +|.+||+ .+++.+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~----t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~--~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGD----SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDA--RIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETT----TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTS--EEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECC----CceEEEEEecCcc-cceEEECCCCCEEEEECCCC--eEEEEECcCCCCcEEE
Confidence 378899999999999999999988 5556677773333 89999999999999999997 8999999 8888888
Q ss_pred EecCCCCCCeEEEEEec----CCCEEEEEec-CCeEEEEEc-CCCeeeeeec-------------eeEEEEEEcCCCCE-
Q psy10566 386 KLNHSPEDSLTSCSWNR----DGTKFVCGGI-RGQFYQCDI-EGQVLDSWEG-------------VRVNCLWCRSDGKS- 445 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~----~~~~l~s~~~-dg~i~iwd~-~~~~~~~~~~-------------~~v~~l~~s~~g~~- 445 (604)
.+. +...+..++|+| +|+++++++. +++|.+||. +++.+..+.. .++..+.+++++..
T Consensus 217 ~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 217 EIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 776 345689999999 9999999885 899999998 4666665543 15789999997765
Q ss_pred EEEEeCCCeEEEEEcCCCcccc--cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec----cccceE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSN--LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG----VTQGQF 518 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~----~~~~~~ 518 (604)
+++...++.|.+||..+.+... .+.....+..+.|+|+++++++++ .+++|.+||+.+++++..+.. |.....
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred EEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 5556678999999998765433 344566788899999999877665 588999999999999888874 332222
Q ss_pred EEEeeeCCCC-CcEEEEEe-CCCcEEEEeCCC-------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-------CCC
Q psy10566 519 TIHSCFGGAN-QDFVASGS-EDGKVYIWHVKR-------ELPIATLSGHTRTVSCVAWNPVYHQMIASVS-------DDC 582 (604)
Q Consensus 519 ~i~~~~~~~~-~~~l~sgs-~dg~I~iwd~~~-------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-------~Dg 582 (604)
. +.+|+ +.++++++ .|++|.+||+.+ ++++.++.+|.+.+..++++|+ ++.|++++ .++
T Consensus 375 ~----~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd-g~~l~v~~~~~~~~~~~~ 449 (543)
T 1nir_A 375 N----FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK-SSHLYVDTTFNPDARISQ 449 (543)
T ss_dssp E----EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT-CCEEEECCTTCSSHHHHT
T ss_pred c----cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC-CCcEEEecCCCCCcccCc
Confidence 1 12355 66777776 589999999998 8999999999988999999999 78888876 278
Q ss_pred cEEEECCCCCCCC
Q psy10566 583 TVRIWGPHLNTNK 595 (604)
Q Consensus 583 ~I~iW~~~~~~~~ 595 (604)
+|.+||+.+.+..
T Consensus 450 ~v~v~d~~~~~~~ 462 (543)
T 1nir_A 450 SVAVFDLKNLDAK 462 (543)
T ss_dssp CEEEEETTCTTSC
T ss_pred eEEEEECCCCCCC
Confidence 9999999988744
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-24 Score=225.72 Aligned_cols=282 Identities=11% Similarity=0.046 Sum_probs=212.8
Q ss_pred CCcEEEEEEcCCCC-eEEEEE----CCC----eEEEEEe--CCCCceeEeeEEeccCCCCeeEEEECC------------
Q psy10566 301 CDEVWFCKFSPDGL-KLATGS----KDT----TVIIWDV--DPVTFTCQHRKTLEGHTLGVAYLAWSP------------ 357 (604)
Q Consensus 301 ~~~V~~v~fspdg~-~lasgs----~dg----~i~iwd~--~~~~~~~~~~~~l~~h~~~V~~l~~sp------------ 357 (604)
...|...+|++.|. ++++|+ .|| +|+|||+ . ++.......+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGA--PGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSS--TTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCC--CCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 35677888998886 666776 467 8999999 6 333323356888988888887775
Q ss_pred --CCCeEEEEeCC-Cc---eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---eEEEEEcCCCeeee
Q psy10566 358 --DSSHLLVVGPE-DC---HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---QFYQCDIEGQVLDS 428 (604)
Q Consensus 358 --d~~~l~s~~~d-~~---~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~ 428 (604)
.+..++.++.+ +. +.|++||+..+... .+. .|...+.+++|+|+|+.|++++.++ .|++||+.+.....
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~-~l~-~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQF-VVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCSCE-EEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCCCE-EEe-CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE
Confidence 25566666654 11 48999999865433 332 3667899999999999999999885 99999996443344
Q ss_pred eece--eEEEEEEcCCCCEEE-EEeCCC--eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC-C--eEEEEe
Q psy10566 429 WEGV--RVNCLWCRSDGKSVL-AADTHH--RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST-Q--GVHLWD 500 (604)
Q Consensus 429 ~~~~--~v~~l~~s~~g~~l~-~~~~dg--~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~I~lwd 500 (604)
+..+ .+.+++|+|+|+.++ +++.++ .|++||+.+++...+..+...+.+++|+|+|+.|++++.+ + .|++||
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 4443 689999999999888 555555 4999999988776667777889999999999999988864 4 688889
Q ss_pred cCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC---CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEE
Q psy10566 501 LRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED---GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d---g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s 577 (604)
+.+++. ..+..+.. .+..+.++|+|++|++++.+ +.|++||+.+++. ..+..|. .+.+++|+|+ +.+|++
T Consensus 298 ~~~~~~-~~l~~~~~---~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spd-g~~l~~ 370 (415)
T 2hqs_A 298 INGGAP-QRITWEGS---QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPN-GTMVIY 370 (415)
T ss_dssp TTSSCC-EECCCSSS---EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTT-SSEEEE
T ss_pred CCCCCE-EEEecCCC---cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCC-CCEEEE
Confidence 988764 33333333 34445668999999988864 5899999998876 4566664 8999999999 777877
Q ss_pred EeCCC---cEEEECCCCCC
Q psy10566 578 VSDDC---TVRIWGPHLNT 593 (604)
Q Consensus 578 ~s~Dg---~I~iW~~~~~~ 593 (604)
++.|+ .|++|++..+.
T Consensus 371 ~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 371 SSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEETTEEEEEEEETTSCC
T ss_pred EEcCCCccEEEEEECCCCc
Confidence 77776 79999987553
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-24 Score=226.23 Aligned_cols=263 Identities=14% Similarity=0.114 Sum_probs=208.4
Q ss_pred eecccCCCcEEEEEEcC--------------CCCeEEEEECC------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEE
Q psy10566 295 QVLNDHCDEVWFCKFSP--------------DGLKLATGSKD------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fsp--------------dg~~lasgs~d------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~ 354 (604)
..+.+|...+..+++++ .+..++.++.+ +.|++||++ . .....+.+|...|.+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~--g---~~~~~l~~~~~~v~~~~ 185 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD--G---YNQFVVHRSPQPLMSPA 185 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT--S---CSCEEEEEESSCEEEEE
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC--C---CCCEEEeCCCCcceeeE
Confidence 56889999998888875 25667766654 799999987 2 23466777899999999
Q ss_pred ECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEE-EEecCC--eEEEEEcCCCeeeeee
Q psy10566 355 WSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV-CGGIRG--QFYQCDIEGQVLDSWE 430 (604)
Q Consensus 355 ~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~ 430 (604)
|+|||++|++++.++ ...|++||+.+++..... .+...+.+++|+|||+.|+ +++.++ .|++||+.+.....+.
T Consensus 186 ~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~--~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 186 WSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA--SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee--cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc
Confidence 999999999998763 238999999999876433 3567899999999999888 566555 4999999655445555
Q ss_pred ce--eEEEEEEcCCCCEEEEEeCC-C--eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecC
Q psy10566 431 GV--RVNCLWCRSDGKSVLAADTH-H--RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLR 502 (604)
Q Consensus 431 ~~--~v~~l~~s~~g~~l~~~~~d-g--~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~ 502 (604)
.+ .+.+++|+|+|+.+++++.+ + .|++||+.++....+..+...+.+++|+|+|+++++++.+ ..|++||+.
T Consensus 264 ~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 264 DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 44 68899999999999888864 4 6888899887765555567788999999999999988875 579999999
Q ss_pred CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC---cEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG---KVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg---~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
+++.. .+..+. .+....++|+|++|++++.++ .|++||+. +.....+.+|.+.|.+++|+|.
T Consensus 344 ~~~~~-~l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 344 TGGVQ-VLSSTF----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp TCCEE-ECCCSS----SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCC
T ss_pred CCCEE-EecCCC----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccc
Confidence 88764 344432 234456679999999998877 79999987 5667889999999999999997
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-25 Score=213.63 Aligned_cols=209 Identities=14% Similarity=0.154 Sum_probs=150.7
Q ss_pred CcEEEEEEcCC----CCeEEEEEC--------------------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC
Q psy10566 302 DEVWFCKFSPD----GLKLATGSK--------------------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP 357 (604)
Q Consensus 302 ~~V~~v~fspd----g~~lasgs~--------------------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp 357 (604)
..|+.++|+|| ++++++++. |+.|++|++.+ .++.+..+.+|...++.++|+|
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---DGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT---TSCEEEEEEECCCSSCEEEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC---CCceeeeeccCCCceeeEEeec
Confidence 46777777888 777777653 88888888852 2445667778888899999998
Q ss_pred ---CCCeEEEEeCCCceEEEEEECCCceEEEEecCCC--CCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece
Q psy10566 358 ---DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP--EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV 432 (604)
Q Consensus 358 ---d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 432 (604)
++..|++++.|+ +|++||+.+|+++..+..++ ...+.+++|+|+|..+++++.+..+ |
T Consensus 189 ~~g~~~~LaSgS~D~--TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~--w------------- 251 (356)
T 2w18_A 189 VQGMQEALLGTTIMN--NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK--E------------- 251 (356)
T ss_dssp EETSTTEEEEEETTS--EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------------------
T ss_pred cCCCCceEEEecCCC--cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc--c-------------
Confidence 779999999999 99999999999998886332 3468888999999998887653321 2
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc------cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
.+++|+.|++|++||..+++....+ .+...+.+..+ ++.++++++.|++|+|||+.++++
T Consensus 252 ------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~ 317 (356)
T 2w18_A 252 ------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQC 317 (356)
T ss_dssp ------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSE
T ss_pred ------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence 3678888888899988877654332 12223333333 377899999999999999999999
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
+.++.+|...+. .++.|+|+|++|++|+.|++|+|||+
T Consensus 318 l~tL~gH~~~vv--s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 318 TALLPPVSDQHW--SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECCC--CCC--CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCCeE--EEEEECCCCCEEEEEECCCcEEEecC
Confidence 999998876433 23466899999999999999999995
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-23 Score=224.73 Aligned_cols=294 Identities=11% Similarity=0.061 Sum_probs=221.6
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC----CCCeEEEE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP----DSSHLLVV 365 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp----d~~~l~s~ 365 (604)
..+++.++..+.. +.+++|+|||++|++++.|++|.+||+.. .+.+.+..+. +...+..++|+| ||++++++
T Consensus 168 t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~--~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 168 SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWA--KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTS--SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEE
T ss_pred CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcC--CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEE
Confidence 3456777773333 89999999999999999999999999921 1455667776 445689999999 99999998
Q ss_pred eC-CCceEEEEEECCCceEEEEecCC----------CCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCC-Ceee--eee
Q psy10566 366 GP-EDCHELWVWNIETELLRVKLNHS----------PEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEG-QVLD--SWE 430 (604)
Q Consensus 366 ~~-d~~~~i~vwd~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~-~~~~--~~~ 430 (604)
+. ++ +|.+||..+++++..+... ....+.++.++|++.. +++...++.|.+||... +.+. .+.
T Consensus 244 ~~~~~--~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 244 AYWPP--QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp EEESS--EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE
T ss_pred EccCC--eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec
Confidence 86 55 8999999999988776531 1236899999997765 55666789999999953 3222 222
Q ss_pred -ceeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCccccccc-----CCCCeeEEEECCC-CCEEEEEe-cCCeEEEEec
Q psy10566 431 -GVRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLLQ-----EDHPVMSFTIDAT-DRLALLNV-STQGVHLWDL 501 (604)
Q Consensus 431 -~~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~~-----~~~~i~~~~~s~~-~~~l~~~~-~dg~I~lwd~ 501 (604)
+..+.++.|+|+|+++++++ .+++|.+||..+++....+. |......+ ++|+ +..++++. .+++|.+||+
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence 23577899999999877655 58899999999987665544 22233333 4677 55555554 5799999999
Q ss_pred CC-------CceeeEeeccccceEEEEeeeCCCCCcEEEEEe-------CCCcEEEEeCCCCcce-EEe--------eCC
Q psy10566 502 RD-------RILLRKFQGVTQGQFTIHSCFGGANQDFVASGS-------EDGKVYIWHVKRELPI-ATL--------SGH 558 (604)
Q Consensus 502 ~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs-------~dg~I~iwd~~~~~~~-~~l--------~~h 558 (604)
.+ .++++++.++...... +.++|++++|++++ .+++|.+||+.+++.. ..+ ..+
T Consensus 401 ~~~~~~~~~~~~v~~l~~~g~~~~~---v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~ 477 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQGQGGGSLF---IKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 477 (543)
T ss_dssp CTTTCTTTBTSEEEEEECSCSCCCC---EECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred CCCCCchhcCeEEEEEEcCCCCceE---EEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCC
Confidence 98 8899999988765433 44579999999987 2779999999999887 443 356
Q ss_pred CCCeeEEEEcCCCCcEEEEEe----CCCcEEEECCCCCC
Q psy10566 559 TRTVSCVAWNPVYHQMIASVS----DDCTVRIWGPHLNT 593 (604)
Q Consensus 559 ~~~V~~v~~sp~~~~~l~s~s----~Dg~I~iW~~~~~~ 593 (604)
...+..+.|+|++..++++.. .|+.|.|||.++++
T Consensus 478 ~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 478 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 788999999999544444432 47999999999876
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-25 Score=244.88 Aligned_cols=226 Identities=16% Similarity=0.194 Sum_probs=187.6
Q ss_pred ccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.+....+|+... -.......+.+|.+.|++++|+|+ +++|++|+.||+|++||+. ++.......+.+|...
T Consensus 28 ~~dg~I~vwd~~~----~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~--~~~~~~~~~~~~h~~~ 101 (753)
T 3jro_A 28 SSDKTIKIFEVEG----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE--NGRWSQIAVHAVHSAS 101 (753)
T ss_dssp ETTTEEEEEEEET----TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSC
T ss_pred ECCCcEEEEecCC----CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC--CCcccccccccCCCCC
Confidence 3455566676431 134667889999999999999998 9999999999999999998 4444577888899999
Q ss_pred eeEEEECCC--CCeEEEEeCCCceEEEEEECCCceE--EEEecCCCCCCeEEEEEec-------------CCCEEEEEec
Q psy10566 350 VAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELL--RVKLNHSPEDSLTSCSWNR-------------DGTKFVCGGI 412 (604)
Q Consensus 350 V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l~s~~~ 412 (604)
|.+++|+|+ +..+++++.|+ .|++||+.++.. ...+ ..|...|.+++|+| ++..+++|+.
T Consensus 102 V~~v~~sp~~~~~~l~sgs~dg--~I~vwdl~~~~~~~~~~~-~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 102 VNSVQWAPHEYGPLLLVASSDG--KVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp EEEEEECCGGGCSEEEEEETTS--EEEEEECCSSSCCCCEEE-ECCSSCEEEEEECCCC---------CGGGCCEEEEET
T ss_pred eEEEEECCCCCCCEEEEEeCCC--cEEEEEeecCCCcceeEe-ecCCCceEEEEecCcccccccccccCCCCCEEEEEEC
Confidence 999999999 99999999998 899999988732 2222 36788999999999 5899999999
Q ss_pred CCeEEEEEcCC-----Ceeeeeece--eEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCc------ccccccCCCCee
Q psy10566 413 RGQFYQCDIEG-----QVLDSWEGV--RVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLT------DSNLLQEDHPVM 476 (604)
Q Consensus 413 dg~i~iwd~~~-----~~~~~~~~~--~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~------~~~~~~~~~~i~ 476 (604)
||.|++||+.. .....+.+| .|.+++|+|+ ++.+++++.||.|++||+.+.. ......+...+.
T Consensus 179 dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~ 258 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLW 258 (753)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCC
T ss_pred CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceE
Confidence 99999999943 334455554 6999999999 8999999999999999998863 222334678899
Q ss_pred EEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 477 SFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 477 ~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
+++|+|++.++++++.||.|++||+.++..
T Consensus 259 ~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 259 RASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp CEEECTTTCCEEEECSSSCEECCBCCSSSC
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEecCCCCC
Confidence 999999999999999999999999986543
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=241.73 Aligned_cols=279 Identities=14% Similarity=0.128 Sum_probs=211.8
Q ss_pred CCcEEEEEEcCCCCeEEEEEC-CC-----eEEEEEeCCCCceeEeeEEeccCC------------------------CCe
Q psy10566 301 CDEVWFCKFSPDGLKLATGSK-DT-----TVIIWDVDPVTFTCQHRKTLEGHT------------------------LGV 350 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~-dg-----~i~iwd~~~~~~~~~~~~~l~~h~------------------------~~V 350 (604)
...|.+++|||||++|++++. |+ .|++||+. + .+....+..+. ..|
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~--~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIG--S--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETT--T--CCEEEEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECC--C--CceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 457999999999999999998 88 89999998 2 23333333332 348
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCc---eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETE---LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 427 (604)
.+++|||||++|++++. + .|++||+.++ ... .+. .+...+.+++|+|||++|++++ ++.|++||+.+....
T Consensus 112 ~~~~~SpDg~~l~~~~~-~--~i~~~d~~~~~~~~~~-~l~-~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-G--ELYLYDLKQEGKAAVR-QLT-HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp CCCEECTTSSEEEEEET-T--EEEEEESSSCSTTSCC-BCC-CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred ceeEECCCCCEEEEEeC-C--cEEEEECCCCCcceEE-Ecc-cCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence 89999999999999887 4 7999999988 433 333 4557799999999999999887 469999999654443
Q ss_pred eeec-e-e-----------------EEEEEEcCCCCEEEEEeCCC---------------------------------eE
Q psy10566 428 SWEG-V-R-----------------VNCLWCRSDGKSVLAADTHH---------------------------------RI 455 (604)
Q Consensus 428 ~~~~-~-~-----------------v~~l~~s~~g~~l~~~~~dg---------------------------------~I 455 (604)
.+.. . . +..++|+|||+.|++++.|+ .|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 3321 1 1 47799999999999987765 78
Q ss_pred EEEEcCC-Ccccccc---cCCCCeeEEEECCCCCEEEEEec-----CCeEEEEecCCCceeeEeeccccc-eEEEEeeeC
Q psy10566 456 RTYNFEH-LTDSNLL---QEDHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQGVTQG-QFTIHSCFG 525 (604)
Q Consensus 456 ~i~d~~~-~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~-----dg~I~lwd~~~~~~~~~~~~~~~~-~~~i~~~~~ 525 (604)
++||+.+ ++..... .+...+..++| |||+.|++++. +..|++||+.+++....+..+... ...+....+
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 9999988 6654433 34567899999 99999998764 467999999999877766654421 101223556
Q ss_pred CCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCCCCCeeEE-EEcCCCCcEEEEEeCCC--cEEEECCCC
Q psy10566 526 GANQDFVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCV-AWNPVYHQMIASVSDDC--TVRIWGPHL 591 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h~~~V~~v-~~sp~~~~~l~s~s~Dg--~I~iW~~~~ 591 (604)
+|+|+++++++.||.+.||.+. ++. ...+..|...|..+ .|+|++..++++++.|+ .++||+++.
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 7999999999999988888765 455 78888888889887 59999444556677676 899998864
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-23 Score=207.96 Aligned_cols=269 Identities=12% Similarity=0.148 Sum_probs=189.5
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC--CceE--EEEecCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE--TELL--RVKLNHS 390 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~--~~~~--~~~~~~~ 390 (604)
.+++++.|+.|++|+++. ++.......+ .|...+.+++|+|+++++++++.++ +.|.+|++. ++.. +..+..
T Consensus 7 l~~~~~~~~~v~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~- 82 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNH-EGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESAL- 82 (343)
T ss_dssp EEEEEGGGTEEEEEEECT-TSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEEC-
T ss_pred EEEeCCCCCeEEEEEECC-CCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeecccccc-
Confidence 445557899999999963 2333344443 3777899999999999999988873 389999997 5553 333332
Q ss_pred CCCCeEEEEEecCCCEEEEEec-CCeEEEEEcC-C---Ceeeeeece-eEEEEEEcCCCCEEEEEe-CCCeEEEEEcCC-
Q psy10566 391 PEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIE-G---QVLDSWEGV-RVNCLWCRSDGKSVLAAD-THHRIRTYNFEH- 462 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~-~---~~~~~~~~~-~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~- 462 (604)
...+..++|+|+++++++++. ++.|.+||++ + +....+... .+.+++|+|+++.+++++ .++.|.+||+.+
T Consensus 83 -~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 83 -PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp -SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred -CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 237889999999998877765 8899999992 2 233333332 578899999999888887 899999999987
Q ss_pred Ccccc------cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCC--Cce--eeEeeccc---cceEEEEeeeCCCC
Q psy10566 463 LTDSN------LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRD--RIL--LRKFQGVT---QGQFTIHSCFGGAN 528 (604)
Q Consensus 463 ~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~--~~~--~~~~~~~~---~~~~~i~~~~~~~~ 528 (604)
++... .......+..++|+|+++++++++ .++.|.+||+.. ++. ...+.... .....+..+.++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred CceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 43321 122345788899999999776665 789999999954 432 22222111 11112334556799
Q ss_pred CcEEEE-EeCCCcEEEEeCC--C--CcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CCCcEEEECCC
Q psy10566 529 QDFVAS-GSEDGKVYIWHVK--R--ELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DDCTVRIWGPH 590 (604)
Q Consensus 529 ~~~l~s-gs~dg~I~iwd~~--~--~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~Dg~I~iW~~~ 590 (604)
++++++ +..++.|++||+. + .+.+..+..+.. +.+++|+|+ +.+|++++ .|+.|.+|+++
T Consensus 242 g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d-g~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 242 GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS-GKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT-SSEEEEECTTTCEEEEEEEE
T ss_pred CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC-CCEEEEecCCCCeEEEEEEc
Confidence 987774 4579999999998 3 345555665554 899999999 66666665 68999999554
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-22 Score=204.38 Aligned_cols=276 Identities=9% Similarity=0.051 Sum_probs=196.2
Q ss_pred EEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE-E
Q psy10566 307 CKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL-R 384 (604)
Q Consensus 307 v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~-~ 384 (604)
..|.+++. .+++++.++.|.+||.. +.+....+..+...+ +++|+|+++++++++... +.|++||..+++. .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~-~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTD----TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFC-QTLVQIETQLEPPKV 76 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETT----TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTT-CEEEEEECSSSSCEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCc----ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCC-CeEEEEECCCCceeE
Confidence 34666655 47788889999999988 334445555556667 999999999887777633 2899999999886 5
Q ss_pred EEecCCCCCCeEEEEEecCCCEEEEEecCC---eEEEEEcC-CCeeeeeec-eeEEEEEEcCCCCEEEEE-eCCCe-EEE
Q psy10566 385 VKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---QFYQCDIE-GQVLDSWEG-VRVNCLWCRSDGKSVLAA-DTHHR-IRT 457 (604)
Q Consensus 385 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~-~~~~~~~~~-~~v~~l~~s~~g~~l~~~-~~dg~-I~i 457 (604)
..+. .+..+..+++|+|++++++++..++ .|.+||+. ++.+..+.. ....+++|+|+|++++++ ..++. |.+
T Consensus 77 ~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 77 VAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred Eecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEE
Confidence 5444 3344444499999999999655553 89999995 555555543 357899999999866655 45577 999
Q ss_pred EEcCCCcc-----cccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCce---eeEeeccccceEEEEeeeCCCC
Q psy10566 458 YNFEHLTD-----SNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRIL---LRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 458 ~d~~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~---~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
|++..... .........+..++|+|+++++++++ .++.|++||+.+++. +..+..... +..+.++|+
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~----~~~~~~spd 231 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL----PGTIVVSRD 231 (331)
T ss_dssp EEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC----CCCEEECTT
T ss_pred EEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC----CceEEECCC
Confidence 99875322 12234456689999999999766655 588999999999888 666654322 233456799
Q ss_pred CcEEEEEe-CCCcEEEEeCCCCcc--eEEeeCC----CC---CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 529 QDFVASGS-EDGKVYIWHVKRELP--IATLSGH----TR---TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 529 ~~~l~sgs-~dg~I~iwd~~~~~~--~~~l~~h----~~---~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|++++.++ .++.|.+||..+++. +..+..+ .. .+..++|+|++..+++++..++.|.+|++....
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 99776655 478899999999887 4444332 22 235689999944445666667899999998654
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-23 Score=202.40 Aligned_cols=252 Identities=16% Similarity=0.146 Sum_probs=190.4
Q ss_pred EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC-ceEEEEecCCCCCCeE
Q psy10566 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLT 396 (604)
Q Consensus 318 sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~-~~~~~~~~~~~~~~v~ 396 (604)
+++.|++|++||+. .... ..+..|...|.+++|+|++++|++++ ++ .|++||+.+ ++........+...+.
T Consensus 17 ~~~~~~~i~~~d~~----~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIR----TRKM-RVVWQTPELFEAPNWSPDGKYLLLNS-EG--LLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETT----TTEE-EEEEEESSCCEEEEECTTSSEEEEEE-TT--EEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCCcceeEEEEeCC----CCce-eeeccCCcceEeeEECCCCCEEEEEc-CC--eEEEEeCCCCCCceEecccccccccc
Confidence 34678999999997 2222 24455888999999999999999976 55 799999999 8776655434456789
Q ss_pred EEEEecCCCEEEEEec--CC--eEEEEEcCCCeeeeeec-eeEEEEEEcCCCCEEE-EEeCCCeEEEEEcC--CCccccc
Q psy10566 397 SCSWNRDGTKFVCGGI--RG--QFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVL-AADTHHRIRTYNFE--HLTDSNL 468 (604)
Q Consensus 397 ~~~~~~~~~~l~s~~~--dg--~i~iwd~~~~~~~~~~~-~~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~--~~~~~~~ 468 (604)
+++|+|+++++++++. ++ .|..++..+.....+.. ..+..++|+|+++.++ ++..++.+++|++. +.....+
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 9999999999999983 34 44555555444444433 3588899999999887 67788989999864 4444455
Q ss_pred ccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC--------
Q psy10566 469 LQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-------- 538 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-------- 538 (604)
..+...+.+++|+|+++.+++++ .++.+++|++. .+..+..+..+.. .+..+.++|++++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY---GDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE---EEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc---ccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 55677899999999999888776 48889999886 4555666665543 44556678999999988876
Q ss_pred ---CcEEEEeCCCCcc--eEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 539 ---GKVYIWHVKRELP--IATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 539 ---g~I~iwd~~~~~~--~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
+.|++||+.+++. +..+.+|...+.+++|+|+ +..|++++.|
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~ 292 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPD-GDEFAYVRYF 292 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTT-SSEEEEEEEC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCC-CCEEEEEEec
Confidence 5699999998876 4445578889999999999 6767666655
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-21 Score=197.95 Aligned_cols=269 Identities=12% Similarity=0.072 Sum_probs=205.2
Q ss_pred CCCcEEEEEEcCCCCeEEEEEC-------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSK-------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~-------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
....+..++|+|+|+++++++. ++.|.+||.. +.+....+.. ...+..++|+|+++++++++..+ +.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~-~~ 112 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV----TLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVN-SA 112 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT----TCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTT-TE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC----CCeEEEEEec-CCCcceEEECCCCCEEEEEecCC-CE
Confidence 3456889999999998888774 5689999987 3344444443 34578899999999776665543 28
Q ss_pred EEEEECCCceEEEEecCCCCC--------CeEEEEEecCCCEEEEEe--cCCeEEEEEcC-CCeeeeee--ceeEEEEEE
Q psy10566 373 LWVWNIETELLRVKLNHSPED--------SLTSCSWNRDGTKFVCGG--IRGQFYQCDIE-GQVLDSWE--GVRVNCLWC 439 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~-~~~~~~~~--~~~v~~l~~ 439 (604)
|.+||..+++....+...... .+.+++|+|+++.+++++ .++.|.+||.. ++....+. +..+.++++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 999999999987777643222 268899999999888776 47899999995 55555555 235788999
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCccccccc-----CCCCeeEEEECCCCCEEEEEecC-CeEEEEecCCCceeeEeecc
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-----EDHPVMSFTIDATDRLALLNVST-QGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~d-g~I~lwd~~~~~~~~~~~~~ 513 (604)
+|+|+.+++++.++.|.+||..+.+...... +...+..++++|+++++++++.+ +.|.+||+.+++.+..+...
T Consensus 193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 9999999999999999999999876654443 24457789999999988777654 89999999999888877754
Q ss_pred ccceEEEEeeeCCCCCcEEEEEe-CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGS-EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
.. ..+.++|+++++++++ .++.|.+||..+++.+..+..+ ..+.+++|+|+ +.+++.+..+
T Consensus 273 ~~-----~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~v~~~~ 334 (353)
T 3vgz_A 273 ES-----LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSAD-GKTLYVSVKQ 334 (353)
T ss_dssp SC-----CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTT-SCEEEEEEEC
T ss_pred CC-----ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCC-CCEEEEEEcc
Confidence 32 1234468998665555 6899999999999998888754 46899999999 5544444444
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-22 Score=203.18 Aligned_cols=265 Identities=9% Similarity=-0.027 Sum_probs=197.1
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-C-CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-L-GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~-~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
++|++++.++.|.+||.. +.+....+.... . .+..++|+|+++.+++++..+ +.|++||+.+++....+...+
T Consensus 2 ~~~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTE----KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-ESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETT----TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-TEEEEEETTTCCEEEEEECCB
T ss_pred cEEEEcCCCCeEEEEECC----CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-CeEEEEECCCCCeEeeEEcCC
Confidence 478999999999999997 344455554222 2 488999999998776655543 389999999998877665332
Q ss_pred C----CCeEEEEEecCCCEEEEEe------------cCCeEEEEEcC-CCeeeeee-ceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 392 E----DSLTSCSWNRDGTKFVCGG------------IRGQFYQCDIE-GQVLDSWE-GVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 392 ~----~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~-~~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
. ..+.+++|+|+|+++++++ .++.|.+||+. ++.+..+. +..+.+++++|+|++++++ ++
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SS
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CC
Confidence 1 2577899999999998886 57999999995 44444444 3357788999999988888 68
Q ss_pred eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC------------------------eEEEEecCCCceeeE
Q psy10566 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ------------------------GVHLWDLRDRILLRK 509 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------------------------~I~lwd~~~~~~~~~ 509 (604)
.|.+||+.+.+....+........+.++|++..+++....+ .|.+||+.+++.. .
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~ 233 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-M 233 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-E
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-E
Confidence 89999998876654443322112337889988776554332 4789999988765 3
Q ss_pred ee--ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 510 FQ--GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 510 ~~--~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
+. .+.. .+..+.++|++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+ +.+|++++.|+.|++|
T Consensus 234 ~~~~~~~~---~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 234 REVRIMDV---FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTD-GSTVWLGGALGDLAAY 306 (337)
T ss_dssp EEEEECSS---CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTT-SCEEEEESBSSEEEEE
T ss_pred eecCCCCC---ceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCC-CCEEEEEcCCCcEEEE
Confidence 22 2222 22335567999999988 799999999999988887744 46789999999 6777778889999999
Q ss_pred CCCCCC
Q psy10566 588 GPHLNT 593 (604)
Q Consensus 588 ~~~~~~ 593 (604)
|+.+++
T Consensus 307 d~~~~~ 312 (337)
T 1pby_B 307 DAETLE 312 (337)
T ss_dssp ETTTCC
T ss_pred ECcCCc
Confidence 998875
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=226.78 Aligned_cols=283 Identities=13% Similarity=0.126 Sum_probs=200.0
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC---CeeEEEECCCCCeEEEEeCCCc-------eE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL---GVAYLAWSPDSSHLLVVGPEDC-------HE 372 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~spd~~~l~s~~~d~~-------~~ 372 (604)
.+.+++|+|||+++++ +.||+|++||+. +.+....+.+|.. .|.+++|||||++|++++.++. +.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~----~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVE----TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGG----GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECC----CCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 4677899999998876 689999999998 4444556666654 4999999999999999987521 37
Q ss_pred EEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeeece------------------
Q psy10566 373 LWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWEGV------------------ 432 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~------------------ 432 (604)
+++||+.+++...... ..+...+..++|+|||+.|+.++. +.|++||+.+ +.......+
T Consensus 93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 9999999987632221 133345889999999999999886 7999999964 333322221
Q ss_pred --eEEEEEEcCCCCEEEEEeCCC----------------------------------eEEEEEcCCCccccccc-C----
Q psy10566 433 --RVNCLWCRSDGKSVLAADTHH----------------------------------RIRTYNFEHLTDSNLLQ-E---- 471 (604)
Q Consensus 433 --~v~~l~~s~~g~~l~~~~~dg----------------------------------~I~i~d~~~~~~~~~~~-~---- 471 (604)
.+.+++|+|||+.|++++.++ .|++||+.+.+....+. +
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 127899999999999887553 79999998876433222 2
Q ss_pred --CCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCceeeEeeccccc-eEE-EEeeeCCCCCcEEEE--EeCCC--
Q psy10566 472 --DHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRILLRKFQGVTQG-QFT-IHSCFGGANQDFVAS--GSEDG-- 539 (604)
Q Consensus 472 --~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~~~~~~~~~~~~-~~~-i~~~~~~~~~~~l~s--gs~dg-- 539 (604)
...+..++|+|||+++++.... ..|++||+.+++....+..+... ... .....++|+|+.|+. +..++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 4578899999999988776543 57999999998877665443221 110 013456799997664 45667
Q ss_pred ----cEEEEe-CCCCcc--eEEeeCCCCCeeE-EEEcCCCCcEEEEE-eCC--CcEEEECCCCC
Q psy10566 540 ----KVYIWH-VKRELP--IATLSGHTRTVSC-VAWNPVYHQMIASV-SDD--CTVRIWGPHLN 592 (604)
Q Consensus 540 ----~I~iwd-~~~~~~--~~~l~~h~~~V~~-v~~sp~~~~~l~s~-s~D--g~I~iW~~~~~ 592 (604)
.|++|| ..++.. ...+..+...+.. ++|+|+ +..|+.. ..+ +.+++|+++..
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEK-GNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETT-TTEEEEEESSSCTTCCEEEEECSS
T ss_pred cceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCC-CCEEEEEEcCCCCcceEEEEEeCC
Confidence 577788 344441 5555544444554 699999 5666544 444 88999998654
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-22 Score=230.10 Aligned_cols=288 Identities=9% Similarity=0.014 Sum_probs=208.3
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECC----C--eEEEEEeCCCCceeEeeEEeccCCCCe-------eEEEECCCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKD----T--TVIIWDVDPVTFTCQHRKTLEGHTLGV-------AYLAWSPDS 359 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~d----g--~i~iwd~~~~~~~~~~~~~l~~h~~~V-------~~l~~spd~ 359 (604)
....+.+|.+.|.+++|||||++||+++.+ + .|++|++. ++ . ...+..|...+ .+++|+|||
T Consensus 44 ~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~--~g--~-~~~lt~~~~~~~~~~~~~~~~~~SpDg 118 (1045)
T 1k32_A 44 STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGE--NG--E-IKRITYFSGKSTGRRMFTDVAGFDPDG 118 (1045)
T ss_dssp CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETT--TT--E-EEECCCCCEEEETTEECSEEEEECTTC
T ss_pred cEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECC--CC--C-eEEcccCCCcccccccccccccCCCCC
Confidence 356788899999999999999999988654 3 78999987 22 2 46778888888 999999999
Q ss_pred CeEEEEeCC----CceEEEEEECCCceEEEEec-----------------------------------------------
Q psy10566 360 SHLLVVGPE----DCHELWVWNIETELLRVKLN----------------------------------------------- 388 (604)
Q Consensus 360 ~~l~s~~~d----~~~~i~vwd~~~~~~~~~~~----------------------------------------------- 388 (604)
+.+++++.+ +...|+.|++.++.......
T Consensus 119 ~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~ 198 (1045)
T 1k32_A 119 NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKK 198 (1045)
T ss_dssp CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEE
T ss_pred EEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEE
Confidence 966666644 33378999887665321110
Q ss_pred -CCCCCCeEEEEEecCCCEEEEEecCCeEEEEE-----------------------------------------cCCCee
Q psy10566 389 -HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD-----------------------------------------IEGQVL 426 (604)
Q Consensus 389 -~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd-----------------------------------------~~~~~~ 426 (604)
..|...+.++.|+++ ..+++++.++.+.+|. +.+..+
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l 277 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKI 277 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCE
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEe
Confidence 122334445555554 3444444455555554 322222
Q ss_pred eeeece-------------eEEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCcccccccCCC-CeeEEEECCCCCEEEEEe
Q psy10566 427 DSWEGV-------------RVNCLWCR-SDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH-PVMSFTIDATDRLALLNV 491 (604)
Q Consensus 427 ~~~~~~-------------~v~~l~~s-~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~ 491 (604)
..+.+. .+..++|+ |+|+.+++++ ++.|.+|+...........+.. .+..++|+ +|+.+++++
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s 355 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGT 355 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEE
T ss_pred eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEE
Confidence 222221 35678888 8888887777 7788888887766555555555 78899999 999999998
Q ss_pred cCCeEE-EEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 492 STQGVH-LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 492 ~dg~I~-lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.++.+. +||+.+++... +.++... +..+.++|+|++|++++.++.|++||+.+++....+.+|.+.+.+++|+|+
T Consensus 356 ~~~~l~~~~d~~~~~~~~-l~~~~~~---~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 356 REGDFLGIYDYRTGKAEK-FEENLGN---VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp TTEEEEEEEETTTCCEEE-CCCCCCS---EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred CCCceEEEEECCCCCceE-ecCCccc---eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 888898 99998775543 3344443 344566899999999999999999999999988888889999999999999
Q ss_pred CCcEEEEEeCCC----------cEEEECCCCCC
Q psy10566 571 YHQMIASVSDDC----------TVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg----------~I~iW~~~~~~ 593 (604)
+.+|++++.++ .|++||+.++.
T Consensus 432 -G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 432 -SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp -SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred -CCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 77777776654 89999998764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-22 Score=215.33 Aligned_cols=273 Identities=12% Similarity=0.013 Sum_probs=200.6
Q ss_pred CCcEEEEEEcCCCCeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEeC---CCceEEEE
Q psy10566 301 CDEVWFCKFSPDGLKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGP---EDCHELWV 375 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~~---d~~~~i~v 375 (604)
..+|++++|+|||++||+++. ||++.||+++ . .. ...+..|. ..+.+++|+|| +.+++++. +....++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~--~--g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYD--G--GE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEE--T--TE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEc--C--CC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 457999999999999999887 9999999986 2 22 24445555 68999999999 67776664 23224555
Q ss_pred EEC--CCceEEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCC
Q psy10566 376 WNI--ETELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 376 wd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~d 452 (604)
++. ..+.. .+.. ...+...+|+|+++. +++.+.++.+.+||+++.....+......+++|+|||+.+++++.+
T Consensus 95 ~~~~~~g~~~--~l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 95 VNTSRPGEEQ--RLEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp EETTSTTCCE--ECTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEE
T ss_pred EeccCCCccc--cccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEc
Confidence 665 33333 3332 223557789998864 3344445555699996655544444433889999999999988877
Q ss_pred ----CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC--eEEEEecCCCceeeEeeccccceEEE-----E
Q psy10566 453 ----HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ--GVHLWDLRDRILLRKFQGVTQGQFTI-----H 521 (604)
Q Consensus 453 ----g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~I~lwd~~~~~~~~~~~~~~~~~~~i-----~ 521 (604)
+.|++||+.+++...+..+...+..++|+|||+.|+++..++ .|++||+.+++.. .+.++...+..+ .
T Consensus 171 ~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp ETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 789999999888777777778899999999999999888888 8999999998777 555554322111 1
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCc---EEEECCCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCT---VRIWGPHL 591 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~---I~iW~~~~ 591 (604)
...++|+|.++++++.||.+++|++ |+... .+.+.|.+++|+ + +.++++++.+.+ +.+|+...
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-T-TEEEEEEEETTEEEEEEEETTCC
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-C-CEEEEEEcCCCCCCeEEEEcCCC
Confidence 1226799999999999999999999 66544 345778999999 7 788888887744 77777654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-21 Score=216.41 Aligned_cols=277 Identities=11% Similarity=0.024 Sum_probs=201.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC-
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET- 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~- 380 (604)
..|.+++|||| ++++.+. ++.|++||+. ++ .. ..+..+...+.+++|||||+.|+++ .++ .|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~--~~--~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~--~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDML--AR--KV-TYLFDTNEETASLDFSPVGDRVAYV-RNH--NLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETT--TT--EE-EEEECCTTCCTTCEECTTSSEEEEE-ETT--EEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECC--CC--ce-EEccCCcccccCCcCCCCCCEEEEE-ECC--eEEEEecCcc
Confidence 56999999999 6565553 6999999997 22 22 3344567789999999999999986 455 799999998
Q ss_pred ----ceEEEEecCCCCC-------------CeEEEEEecCCCEEEEEe--------------------------------
Q psy10566 381 ----ELLRVKLNHSPED-------------SLTSCSWNRDGTKFVCGG-------------------------------- 411 (604)
Q Consensus 381 ----~~~~~~~~~~~~~-------------~v~~~~~~~~~~~l~s~~-------------------------------- 411 (604)
++........... .+.+++|+|||++|++++
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 7765544322221 148899999999999987
Q ss_pred -cCCeEEEEEcCCCeeeeee-----ceeEEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCC-cccccccC--C---CC
Q psy10566 412 -IRGQFYQCDIEGQVLDSWE-----GVRVNCLWCRSDGKSVLAADTHH-----RIRTYNFEHL-TDSNLLQE--D---HP 474 (604)
Q Consensus 412 -~dg~i~iwd~~~~~~~~~~-----~~~v~~l~~s~~g~~l~~~~~dg-----~I~i~d~~~~-~~~~~~~~--~---~~ 474 (604)
.+..|++||+++....... ...+.+++|+|||+.+++++.++ .|++||+.++ ........ . ..
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 4468999999654433322 23689999999999999987775 8999999887 33333321 1 12
Q ss_pred eeEEEECC--CCCEEEEEecCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-CC----cEEEEeC
Q psy10566 475 VMSFTIDA--TDRLALLNVSTQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DG----KVYIWHV 546 (604)
Q Consensus 475 i~~~~~s~--~~~~l~~~~~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg----~I~iwd~ 546 (604)
+.+++|+| +|++++++..++.+++|++. ++..+..+..+...+.. ...++|+++.|+.++. ++ .|+.||.
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~--~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTN--FAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEE--EEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEe--eeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 46789999 99999999999999999886 56666777665543322 2456799987765554 44 6778888
Q ss_pred CCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE-eCC---CcEEEECCCCCC
Q psy10566 547 KRELPIATLSGHTRTVSCVAWNPVYHQMIASV-SDD---CTVRIWGPHLNT 593 (604)
Q Consensus 547 ~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~-s~D---g~I~iW~~~~~~ 593 (604)
.+++ ...+. |...+.+++|+|+ +.+++.. +.+ +.|++|++.+++
T Consensus 390 ~~~~-~~~l~-~~~~~~~~~~spd-g~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 390 KGGK-TKDLT-PESGMHRTQLSPD-GSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCCC-CEESC-CSSSEEEEEECTT-SSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCC-ceecc-CCCceEEEEECCC-CCEEEEEecCCCCCcEEEEEECCCCe
Confidence 7766 44454 6778999999999 5555544 443 569999998764
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-21 Score=191.17 Aligned_cols=263 Identities=10% Similarity=0.056 Sum_probs=187.6
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECC-CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKD-TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~d-g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd 377 (604)
.|...+.+++|+|+|++|++++.+ +.|.+|+++..++....+..+..+. .+.+++|+|+++++++++.++ +.|.+||
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~-~~i~~~d 112 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNA-GNVSVTR 112 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCC-CeEEEEE
Confidence 477889999999999999988876 9999999974444555555665544 789999999999888777633 3899999
Q ss_pred CC---CceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC--CCeee----ee---eceeEEEEEEcCCCC
Q psy10566 378 IE---TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE--GQVLD----SW---EGVRVNCLWCRSDGK 444 (604)
Q Consensus 378 ~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~--~~~~~----~~---~~~~v~~l~~s~~g~ 444 (604)
+. +......+. ....+.+++|+|+++++++++ .++.|.+||+. ++... .. .+..+..++|+|+++
T Consensus 113 ~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 113 LEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred CCCCcccccccccc--CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 94 444444443 334588999999999888887 89999999995 33322 11 123678899999999
Q ss_pred EEEEEe-CCCeEEEEEcCC--Cccc--cc---cc----CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecC--CC--cee
Q psy10566 445 SVLAAD-THHRIRTYNFEH--LTDS--NL---LQ----EDHPVMSFTIDATDRLALLNV-STQGVHLWDLR--DR--ILL 507 (604)
Q Consensus 445 ~l~~~~-~dg~I~i~d~~~--~~~~--~~---~~----~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~--~~--~~~ 507 (604)
++++++ .++.|.+||+.. +... .. .. ....+..++|+|++++++++. .++.|.+||+. ++ +.+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 776655 789999999954 2211 11 11 123566899999999887555 68999999998 22 334
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEe-CCCcEEEEe--CCCCcc--eEEeeCCCCCeeEEEEcCC
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGS-EDGKVYIWH--VKRELP--IATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd--~~~~~~--~~~l~~h~~~V~~v~~sp~ 570 (604)
..+..+.. +..+.++|+|+++++++ .++.|.+|+ ..+++. +..+.. .....+++|.|+
T Consensus 271 ~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~ 333 (343)
T 1ri6_A 271 GFQPTETQ----PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAH 333 (343)
T ss_dssp EEEECSSS----CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEE
T ss_pred eeecCCCc----cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcc
Confidence 44433322 33355679999888887 589999995 446643 444443 245677888776
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.8e-22 Score=220.73 Aligned_cols=278 Identities=10% Similarity=0.053 Sum_probs=203.4
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.|.+++|||||++|++++. +.|++||+..... .....+..|...+.+++|||||++|++++.+ .|++||+.+++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~--~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~---~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK--AAVRQLTHGEGFATDAKLSPKGGFVSFIRGR---NLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCST--TSCCBCCCSSSCEEEEEECTTSSEEEEEETT---EEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCc--ceEEEcccCCcccccccCCCCCCEEEEEeCC---cEEEEecCCCC
Confidence 4889999999999999986 9999999982200 0234566788889999999999999998754 69999999987
Q ss_pred EEEEecCCCCCC----------------eEEEEEecCCCEEEEEecCC--------------------------------
Q psy10566 383 LRVKLNHSPEDS----------------LTSCSWNRDGTKFVCGGIRG-------------------------------- 414 (604)
Q Consensus 383 ~~~~~~~~~~~~----------------v~~~~~~~~~~~l~s~~~dg-------------------------------- 414 (604)
....... +... +.+++|+|||++|++++.|+
T Consensus 184 ~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 184 QMQLTAD-GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEECCCC-CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred EEEeccC-CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 6654432 2221 47899999999999998765
Q ss_pred -eEEEEEcCC-Ceeeeee-----ceeEEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCCcccccccCCC-----CeeE
Q psy10566 415 -QFYQCDIEG-QVLDSWE-----GVRVNCLWCRSDGKSVLAADT-----HHRIRTYNFEHLTDSNLLQEDH-----PVMS 477 (604)
Q Consensus 415 -~i~iwd~~~-~~~~~~~-----~~~v~~l~~s~~g~~l~~~~~-----dg~I~i~d~~~~~~~~~~~~~~-----~i~~ 477 (604)
.|.+||+++ ....... ...+..++| |||+.+++++. +..|++||+.+++......... .+..
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCc
Confidence 788899865 4333322 246889999 99999987764 5679999999877655544322 4568
Q ss_pred EEECCCCCEEEEEecCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEE-EEeCCC--cEEEEeCCC-Ccce
Q psy10566 478 FTIDATDRLALLNVSTQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGSEDG--KVYIWHVKR-ELPI 552 (604)
Q Consensus 478 ~~~s~~~~~l~~~~~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs~dg--~I~iwd~~~-~~~~ 552 (604)
++|+|+|++++++..+|.+++|.+. ++. ...+..+...+..+ ..++|+++.|+ +++.++ .++||++.. +...
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~ 418 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDEL--LAVDEKAGLAYFRAGIESARESQIYAVPLQGGQP 418 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEE--EEEETTTTEEEEEECSSCTTCBEEEEEETTCCCC
T ss_pred eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeE--eEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCe
Confidence 9999999988888889987777765 344 66666655443322 34679998765 455555 899999874 6667
Q ss_pred EEeeCCCCCeeEEEEcCCCCcEEEEEeCC---CcEEEECCCCC
Q psy10566 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDD---CTVRIWGPHLN 592 (604)
Q Consensus 553 ~~l~~h~~~V~~v~~sp~~~~~l~s~s~D---g~I~iW~~~~~ 592 (604)
..+.. ...+.+++|+|++..++++++.. +.+.+|+...+
T Consensus 419 ~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 419 QRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred eeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 77775 66789999999944444444443 46888887543
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=226.65 Aligned_cols=282 Identities=12% Similarity=0.054 Sum_probs=225.2
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
...+.+|.+.+.++.|+++ .++++++.|+++.||.++... .....+..|. .+...+|+|||+.++++. ++ .|
T Consensus 196 ~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g---~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~--~i 267 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDG---KDLRKHTSFT-DYYPRHLNTDGRRILFSK-GG--SI 267 (1045)
T ss_dssp EEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTS---CSCEECCCCC-SSCEEEEEESSSCEEEEE-TT--EE
T ss_pred eEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCC---CcceEecCCC-CcceeeEcCCCCEEEEEe-CC--EE
Confidence 3455899999999999998 677778888999999886322 2234555554 467789999999998875 55 79
Q ss_pred EEEECCCceEEEEecCC----------CCCCeEEEEEe-cCCCEEEEEecCCeEEEEEcCCCeeeeeece---eEEEEEE
Q psy10566 374 WVWNIETELLRVKLNHS----------PEDSLTSCSWN-RDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV---RVNCLWC 439 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~----------~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~v~~l~~ 439 (604)
++||+...... .+... +...+.+++|+ |+|+.+++++ ++.+.+|++.+.....+..+ .+..++|
T Consensus 268 ~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1045)
T 1k32_A 268 YIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGG 345 (1045)
T ss_dssp EEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECS
T ss_pred EEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeE
Confidence 99999555443 44321 23368999999 9999999888 88999999965544444332 6889999
Q ss_pred cCCCCEEEEEeCCCeEE-EEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceE
Q psy10566 440 RSDGKSVLAADTHHRIR-TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQF 518 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~-i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~ 518 (604)
+ +|+.+++++.++.+. +||+.+.....+..+...+..++|+|+|+++++++.++.|++||+.+++......++....
T Consensus 346 s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v- 423 (1045)
T 1k32_A 346 D-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI- 423 (1045)
T ss_dssp S-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC-
T ss_pred c-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc-
Confidence 9 999999999888898 9999887665555666789999999999999999999999999999998877776666543
Q ss_pred EEEeeeCCCCCcEEEEEeCCC----------cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 519 TIHSCFGGANQDFVASGSEDG----------KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg----------~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
..+.++|+|++|++++.++ .|++||+.+++ +..+..|...+.+++|+|+ +..|++++.++..++|+
T Consensus 424 --~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spd-G~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 424 --TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDAD-SKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp --CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTT-SCEEEEEESCCCCCEEC
T ss_pred --cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCC-CCEEEEEecccCCcCcc
Confidence 3345689999999887754 89999999887 7778889888999999999 78888999988888887
Q ss_pred CCC
Q psy10566 589 PHL 591 (604)
Q Consensus 589 ~~~ 591 (604)
...
T Consensus 500 ~~~ 502 (1045)
T 1k32_A 500 RVV 502 (1045)
T ss_dssp SSS
T ss_pred hhc
Confidence 653
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-20 Score=186.33 Aligned_cols=269 Identities=12% Similarity=0.126 Sum_probs=184.5
Q ss_pred CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEE--EEecCCCCCCeEE
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLR--VKLNHSPEDSLTS 397 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~--~~~~~~~~~~v~~ 397 (604)
.++.|.+|+++..++....+... .+...+..++|+|||+ +++++. .+.+.|++|++.++... ..+. .+...+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~-~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLL-AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV-APGTPPAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEE-EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE-EESCCCSE
T ss_pred CCCCEEEEEEcCCCCeEEEeeee-eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee-cCCCCCEE
Confidence 35679999988555555444333 3456788899999999 666554 22348999999877632 2222 24566889
Q ss_pred EEEecCCCEEEEEe-cCCeEEEEEcC--CCe--eeeeec-----------eeEEEEEEcCCCCEEEEEeCCCeEEEEEcC
Q psy10566 398 CSWNRDGTKFVCGG-IRGQFYQCDIE--GQV--LDSWEG-----------VRVNCLWCRSDGKSVLAADTHHRIRTYNFE 461 (604)
Q Consensus 398 ~~~~~~~~~l~s~~-~dg~i~iwd~~--~~~--~~~~~~-----------~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~ 461 (604)
++|+|+|+++++++ .++.|.+|+++ +.. +..+.. ..+.+++++|+|+.+++...++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 99999999988888 67999999984 222 222211 137789999999966666668899999998
Q ss_pred -CCccccc----ccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCC--Cce--eeEeeccccc---eEEEEeeeCCCC
Q psy10566 462 -HLTDSNL----LQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRD--RIL--LRKFQGVTQG---QFTIHSCFGGAN 528 (604)
Q Consensus 462 -~~~~~~~----~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~--~~~--~~~~~~~~~~---~~~i~~~~~~~~ 528 (604)
++..... ......+..++|+|+|++++++ ..++.|.+|++.. ++. +..+...... ......+.++|+
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 3332211 1223467789999999976664 5678999999874 433 2222222211 123455667899
Q ss_pred CcEE-EEEeCCCcEEEEeCCC---CcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CCCcEEEE--CCCCCC
Q psy10566 529 QDFV-ASGSEDGKVYIWHVKR---ELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DDCTVRIW--GPHLNT 593 (604)
Q Consensus 529 ~~~l-~sgs~dg~I~iwd~~~---~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~Dg~I~iW--~~~~~~ 593 (604)
|++| +++..++.|.+|++.. .+.+..+..+...+.+++|+|+ +.+|++++ .++.|.+| |..+++
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 9977 5556689999999972 3556667777777899999999 66666655 45999999 544444
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-21 Score=216.10 Aligned_cols=275 Identities=9% Similarity=0.064 Sum_probs=196.6
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee-EEeccCC-----------------CCeeEEEECCCCCeEEEE
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHT-----------------LGVAYLAWSPDSSHLLVV 365 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~-~~l~~h~-----------------~~V~~l~~spd~~~l~s~ 365 (604)
+..+.|+ |..+++++.|+ | +||+. +++.. ..+..|. ..|.+++|+|| ..++.+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~----tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~ 98 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKA----NGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF 98 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECC----CCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE
Confidence 3446777 66677777787 8 99998 22221 1222222 56999999999 666665
Q ss_pred eCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC------Ceeeeeece-e-----
Q psy10566 366 GPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG------QVLDSWEGV-R----- 433 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~-~----- 433 (604)
. ++ .|++||+.+++...... +...+.+++|+|||+.++++ .++.|++||+.+ +........ .
T Consensus 99 ~-~~--~i~~~d~~~~~~~~l~~--~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g 172 (706)
T 2z3z_A 99 T-QG--GLVGFDMLARKVTYLFD--TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYG 172 (706)
T ss_dssp E-TT--EEEEEETTTTEEEEEEC--CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEES
T ss_pred E-CC--EEEEEECCCCceEEccC--CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcc
Confidence 4 35 89999999987665543 45668889999999999985 789999999964 433322221 2
Q ss_pred ----------EEEEEEcCCCCEEEEEe---------------------------------CCCeEEEEEcCCCcccccc-
Q psy10566 434 ----------VNCLWCRSDGKSVLAAD---------------------------------THHRIRTYNFEHLTDSNLL- 469 (604)
Q Consensus 434 ----------v~~l~~s~~g~~l~~~~---------------------------------~dg~I~i~d~~~~~~~~~~- 469 (604)
+.+++|+|||+.|++++ .+..|++||+.+++.....
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~ 252 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT 252 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc
Confidence 47899999999999987 4467999999887654443
Q ss_pred --cCCCCeeEEEECCCCCEEEEEecCC-----eEEEEecCCCceeeEeeccccc--eEEEEeeeCCC--CCcEEEEEeCC
Q psy10566 470 --QEDHPVMSFTIDATDRLALLNVSTQ-----GVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGA--NQDFVASGSED 538 (604)
Q Consensus 470 --~~~~~i~~~~~s~~~~~l~~~~~dg-----~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~--~~~~l~sgs~d 538 (604)
.+...+.+++|+|+|+.+++++.++ .|++||+.+++....+...... ...+..+.++| +|+++++++.|
T Consensus 253 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC
Confidence 3456789999999999999988775 8999999998444333321111 11122345678 99999999999
Q ss_pred CcEEEEeCC-CCcceEEeeCCCCCeeE-EEEcCCCCcEEEEEeCCC----cEEEECCCCCC
Q psy10566 539 GKVYIWHVK-RELPIATLSGHTRTVSC-VAWNPVYHQMIASVSDDC----TVRIWGPHLNT 593 (604)
Q Consensus 539 g~I~iwd~~-~~~~~~~l~~h~~~V~~-v~~sp~~~~~l~s~s~Dg----~I~iW~~~~~~ 593 (604)
|.++||++. ++..+..+..|...+.+ ++|+|++..++++++.++ .|..|++.++.
T Consensus 333 g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 999999886 67778888888888887 799999444555666665 66677776654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-21 Score=212.92 Aligned_cols=284 Identities=8% Similarity=0.024 Sum_probs=196.1
Q ss_pred cceeecccCCC---cEEEEEEcCCCCeEEEEECC---------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC
Q psy10566 292 ETTQVLNDHCD---EVWFCKFSPDGLKLATGSKD---------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359 (604)
Q Consensus 292 ~~~~~l~~H~~---~V~~v~fspdg~~lasgs~d---------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~ 359 (604)
+....+.+|.. .|.+++|||||++||+++.+ +.|.+||+. ++....+....+|...+.+++|||||
T Consensus 48 ~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~--~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 48 TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP--HGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS--SCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC--CCceEeccCCccccccccccEECCCC
Confidence 34456666665 49999999999999999864 788899998 33322333334555668999999999
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCC-----------------CeEEEEEecCCCEEEEEecCC--------
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPED-----------------SLTSCSWNRDGTKFVCGGIRG-------- 414 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~l~s~~~dg-------- 414 (604)
+.|++++. + .|++||+.+++.......+... .+.+++|+|||+.|++++.++
T Consensus 126 ~~la~~~~-~--~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 126 QQLIFIFE-N--NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp TCEEEEET-T--EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred CEEEEEEC-C--eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEe
Confidence 99999886 4 6999999998776555422221 237899999999999987653
Q ss_pred --------------------------eEEEEEcCCCe-eeeee--------ceeEEEEEEcCCCCEEEEEeC----CCeE
Q psy10566 415 --------------------------QFYQCDIEGQV-LDSWE--------GVRVNCLWCRSDGKSVLAADT----HHRI 455 (604)
Q Consensus 415 --------------------------~i~iwd~~~~~-~~~~~--------~~~v~~l~~s~~g~~l~~~~~----dg~I 455 (604)
.|++||+.+.. ...+. ...+..++|+|||+.+++... +..|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 282 (723)
T 1xfd_A 203 PTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL 282 (723)
T ss_dssp CCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred eccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence 79999996433 34443 246889999999998877653 3579
Q ss_pred EEEEcCCCccccccc--CCCCe----eEEEECCCCCEEEEE--ecCC------eEEEEe-cCCCce--eeEeeccccceE
Q psy10566 456 RTYNFEHLTDSNLLQ--EDHPV----MSFTIDATDRLALLN--VSTQ------GVHLWD-LRDRIL--LRKFQGVTQGQF 518 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~--~~~~i----~~~~~s~~~~~l~~~--~~dg------~I~lwd-~~~~~~--~~~~~~~~~~~~ 518 (604)
++||+.+++...... +...+ ..++|+|+|+.++.. ..++ .|++|| ..++.. ...+.......
T Consensus 283 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~- 361 (723)
T 1xfd_A 283 TLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV- 361 (723)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE-
T ss_pred EEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEE-
Confidence 999998876555432 22333 378999999977754 4566 577777 344431 44444322222
Q ss_pred EEEeeeCCCCCcEEEEEeCC---CcEEEEeCCCCc--ceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 519 TIHSCFGGANQDFVASGSED---GKVYIWHVKREL--PIATLSG---HTRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~d---g~I~iwd~~~~~--~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
.....++|+|+.|+..+.+ +.+++|++.... ....+.. |...+..++|+|++..++++++..+
T Consensus 362 -~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 362 -TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp -EEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred -EeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence 2224567999998766655 789999986432 3444544 6777899999999544444444443
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-20 Score=185.93 Aligned_cols=271 Identities=11% Similarity=0.110 Sum_probs=188.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEEC-CCeEEEEEeCCCCceeEe-eEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSK-DTTVIIWDVDPVTFTCQH-RKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~-dg~i~iwd~~~~~~~~~~-~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.+....+..+...+ +++|+|+|+++++++. ++.|.+||... ... ...+..+..+..+++|+|++++++++..+
T Consensus 30 ~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 104 (331)
T 3u4y_A 30 LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL----EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGL 104 (331)
T ss_dssp CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS----SSCEEEEEEECSSCCCCEEECTTSSEEEECCCS
T ss_pred cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC----CceeEEecccCCCCccceEECCCCCEEEEecCC
Confidence 34455555666677 9999999997766665 88999999982 222 45556566666669999999999944433
Q ss_pred Cce--EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCe-EEEEEcC--CCeeee----e-eceeEEEE
Q psy10566 369 DCH--ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQ-FYQCDIE--GQVLDS----W-EGVRVNCL 437 (604)
Q Consensus 369 ~~~--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~-i~iwd~~--~~~~~~----~-~~~~v~~l 437 (604)
.+ .|++||+.+++....+.. .....+++|+|+|++++++ ..++. |.+|+++ +..... . .+.....+
T Consensus 105 -~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 181 (331)
T 3u4y_A 105 -NHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNI 181 (331)
T ss_dssp -SSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEE
T ss_pred -CCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccce
Confidence 23 799999999988877653 3457999999999866655 45577 9999985 222211 1 12357899
Q ss_pred EEcCCCCEEEEEe-CCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCce--eeEe
Q psy10566 438 WCRSDGKSVLAAD-THHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRIL--LRKF 510 (604)
Q Consensus 438 ~~s~~g~~l~~~~-~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~--~~~~ 510 (604)
+|+|+|+++++++ .++.|.+||+.+.+. ...+.....+..++|+|+|++++++.. ++.|.+||+.+++. +..+
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~ 261 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSF 261 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccc
Confidence 9999999765554 688999999998776 555666677889999999998777654 67899999998876 3333
Q ss_pred ecc----ccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 511 QGV----TQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 511 ~~~----~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
... .........+.++|+++++++++. ++.|.+||+.... +..+.+....-....++|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~-~~~~~~~~~~g~~~~~~~~ 325 (331)
T 3u4y_A 262 GHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV-VGYVAGIEANGGIAICHPD 325 (331)
T ss_dssp ECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE-EEECTTCCCBSCEEECCCC
T ss_pred ccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc-ccceecccccCCeEEECCc
Confidence 322 111111122456799998866555 6799999998644 3344444333233445554
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-20 Score=189.48 Aligned_cols=272 Identities=12% Similarity=0.089 Sum_probs=183.0
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEe-CCCceEEEEEECCCceE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVG-PEDCHELWVWNIETELL 383 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~-~d~~~~i~vwd~~~~~~ 383 (604)
.+++++++.++++++.+++|.+||.. +.+....+..+. ..+..++|+|+++++++++ .++ .|++||+.+++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~--~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVA----SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG--DIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETT----TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTT--EEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECC----CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCC--cEEEEeCCCCcE
Confidence 45788999999999999999999988 344455555433 2578999999998776555 444 899999999988
Q ss_pred EEEecCCC-----CCCeEEEEEecCCCEEEEEecC------------CeEEEEEcCC----Ceeeeeece-eEEEEEEcC
Q psy10566 384 RVKLNHSP-----EDSLTSCSWNRDGTKFVCGGIR------------GQFYQCDIEG----QVLDSWEGV-RVNCLWCRS 441 (604)
Q Consensus 384 ~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~----~~~~~~~~~-~v~~l~~s~ 441 (604)
...+...+ ...+.+++|+|+|+++++++.+ +.|.+||+.. +.+..+... .+.+++++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 77665332 2337889999999999999866 8999999853 222333322 578889999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccccccCCC-------------------------CeeEEEECCCCCEEEEEecCC-e
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH-------------------------PVMSFTIDATDRLALLNVSTQ-G 495 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~-------------------------~i~~~~~s~~~~~l~~~~~dg-~ 495 (604)
+|+ +++++. .|.+||..+++....+.... ....+++++++.......... .
T Consensus 158 dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 666543 49999998876544333221 233455555442110000001 1
Q ss_pred EEEEecCCCceee-EeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc
Q psy10566 496 VHLWDLRDRILLR-KFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573 (604)
Q Consensus 496 I~lwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~ 573 (604)
+..+|..+++... .+..... ....+.++| ++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+ +.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~ 307 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTE---LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKK-GD 307 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSS---CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSS-SS
T ss_pred EEEEeccCCcEEecccccCCC---cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCC-CC
Confidence 2224444433211 1111111 123345568 99999888 889999999999988887643 45789999999 66
Q ss_pred EEEEEeCCCcEEEECCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|++++.++.|++||+.+++
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CEEEESBSSEEEEEETTTTE
T ss_pred EEEEecCCCeEEEEeccccc
Confidence 66667889999999998765
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-20 Score=194.35 Aligned_cols=293 Identities=14% Similarity=0.046 Sum_probs=199.8
Q ss_pred ccceeecccCCCcEEE-----EEEcCCCCeEEEEEC-CCe--EEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeE
Q psy10566 291 CETTQVLNDHCDEVWF-----CKFSPDGLKLATGSK-DTT--VIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL 362 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~-----v~fspdg~~lasgs~-dg~--i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l 362 (604)
...+..+..|...+.. .+|||||++|++++. +|. |.+||+. .........++...+..++|+|||+.|
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~----~g~~~~lt~~~~~~~~~~~~spdg~~l 95 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN----TQVATQLTEGRGDNTFGGFLSPDDDAL 95 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT----TCEEEECCCSSCBCSSSCEECTTSSEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC----CCceEEeeeCCCCCccceEEcCCCCEE
Confidence 4456677778777776 899999999999887 674 7777776 344445555666666678899999999
Q ss_pred EEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEE--EecCCCEEEEE----------------------ecCCeEEE
Q psy10566 363 LVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCS--WNRDGTKFVCG----------------------GIRGQFYQ 418 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~----------------------~~dg~i~i 418 (604)
+.++.++ .|++||+.+++...... .+...+.... ++|+++.++.. ..+..|.+
T Consensus 96 ~~~~~~~--~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 96 FYVKDGR--NLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp EEEETTT--EEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred EEEeCCC--eEEEEECCCCcceeeee-chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 9999887 89999999988665544 2334343333 48899988743 23468999
Q ss_pred EEcCCCeeeeeece--eEEEEEEcC-CCCEEEEEeCC------CeEEEEEcCCCcccccccCC--CCeeEEEECCCCCEE
Q psy10566 419 CDIEGQVLDSWEGV--RVNCLWCRS-DGKSVLAADTH------HRIRTYNFEHLTDSNLLQED--HPVMSFTIDATDRLA 487 (604)
Q Consensus 419 wd~~~~~~~~~~~~--~v~~l~~s~-~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~~~--~~i~~~~~s~~~~~l 487 (604)
||+.+.....+... .+..+.|+| +|+.++....+ ..|.++|........+..+. ..+...+|+|+|+.|
T Consensus 173 ~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 173 VDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCE
T ss_pred EECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEE
Confidence 99964444444332 588999999 99998887763 37888888776655555444 357788999999977
Q ss_pred EEEec-CC----eEEEEecCCCceee--EeeccccceEEEEeeeCCCCCcEEEEE---------eCCCcEEEEeCCCCcc
Q psy10566 488 LLNVS-TQ----GVHLWDLRDRILLR--KFQGVTQGQFTIHSCFGGANQDFVASG---------SEDGKVYIWHVKRELP 551 (604)
Q Consensus 488 ~~~~~-dg----~I~lwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~sg---------s~dg~I~iwd~~~~~~ 551 (604)
+..+. ++ .|++||+.+++... .+.++...........++|+|+.|+.. ..+..|++||+.+++.
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred EEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 65443 22 39999999887433 222211000000012356888877754 4567899999998765
Q ss_pred eEEeeCCCC-----------CeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 552 IATLSGHTR-----------TVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 552 ~~~l~~h~~-----------~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..+..|.. .+.+++|+|++..+++++..+|...||.++-
T Consensus 333 -~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 333 -HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp -EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred -EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 45555655 5788999999444444555678888886643
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-19 Score=181.66 Aligned_cols=272 Identities=14% Similarity=0.148 Sum_probs=186.1
Q ss_pred CCCeEEEEE----CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--CceEEEEEECCC--ceE
Q psy10566 312 DGLKLATGS----KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--DCHELWVWNIET--ELL 383 (604)
Q Consensus 312 dg~~lasgs----~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--~~~~i~vwd~~~--~~~ 383 (604)
...+++.|+ .++.|.+|.++..++........ +...+..++|+||+++|++++.+ +.+.|.+|++.. +..
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 334556664 35689999987555555555555 67778899999999999999886 224798888765 443
Q ss_pred E--EEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC-CCeeeee------ec----------eeEEEEEEcCCC
Q psy10566 384 R--VKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE-GQVLDSW------EG----------VRVNCLWCRSDG 443 (604)
Q Consensus 384 ~--~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~------~~----------~~v~~l~~s~~g 443 (604)
. .... .+......+++ +++++++++ .++.|.+|++. ...+... .+ ..+.+++|+|+|
T Consensus 90 ~~~~~~~-~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 90 HLLNTQK-TMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEEEEEE-CSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EEeeEec-cCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 2 2222 23445677777 888777776 57899999984 2221111 11 135789999999
Q ss_pred CEEEEEeC-CCeEEEEEcCCCcc--------------cccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCce-
Q psy10566 444 KSVLAADT-HHRIRTYNFEHLTD--------------SNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRIL- 506 (604)
Q Consensus 444 ~~l~~~~~-dg~I~i~d~~~~~~--------------~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~- 506 (604)
+++++++. ++.|.+|++..... .........+..++|+|+++++++++ .++.|.+||+.++..
T Consensus 167 ~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 167 KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 97766654 78999999875432 11223455678999999999888877 589999999987754
Q ss_pred -eeEeeccccceEEEEeeeCCCCCcEEEEEeCC--CcEEEEeCC--CCc--ceEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 507 -LRKFQGVTQGQFTIHSCFGGANQDFVASGSED--GKVYIWHVK--REL--PIATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 507 -~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d--g~I~iwd~~--~~~--~~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
+..+............+.++|+|++|+++..+ +.|.+|++. +++ .+..+.. ...+.+++|+|+ +.+|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spd-g~~l~~~~ 324 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPN-GKYLLVAC 324 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTT-SCEEEEEE
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCC-CCEEEEEE
Confidence 23333222211123445678999988776654 899999996 454 4445554 567889999999 66666665
Q ss_pred -CCCcEEEECCC
Q psy10566 580 -DDCTVRIWGPH 590 (604)
Q Consensus 580 -~Dg~I~iW~~~ 590 (604)
.++.|.+|+++
T Consensus 325 ~~~~~v~v~~~d 336 (361)
T 3scy_A 325 RDTNVIQIFERD 336 (361)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCCEEEEEEE
Confidence 78999996554
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-19 Score=183.70 Aligned_cols=243 Identities=10% Similarity=0.070 Sum_probs=190.5
Q ss_pred CCCeeEEEECCCCCeEEEEeCCC-----ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEE
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPED-----CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCD 420 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~-----~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd 420 (604)
...+..++|+|+++++++++.++ .+.|.+||..+++....+.. ...+..++|+|++++++++ ..++.|.+||
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 34678999999999998888652 35899999999988877763 2447889999999966554 5579999999
Q ss_pred cC-CCeeeeeece-----------eEEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCC
Q psy10566 421 IE-GQVLDSWEGV-----------RVNCLWCRSDGKSVLAAD--THHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDR 485 (604)
Q Consensus 421 ~~-~~~~~~~~~~-----------~v~~l~~s~~g~~l~~~~--~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~ 485 (604)
.. ++.+..+... .+.+++++|+|+.+++++ .++.|.+||..+.+....+. ....+..++++|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 94 6666665542 278899999999888776 47889999999887776666 556688999999999
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeecccc-ceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCCCCee
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRELPIATLSGHTRTVS 563 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~ 563 (604)
++++++.++.|.+||+.+++.+..+..... ....+..+.++|+++++++++. ++.|++||..+++.+..+..+.. .
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~ 275 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--L 275 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--C
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--c
Confidence 999999999999999999988877764221 1222333455789987776665 59999999999998888875442 6
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 564 CVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++|+|++..++++...++.|.+||+.+++
T Consensus 276 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred eEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 799999944466666689999999998765
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-20 Score=181.53 Aligned_cols=236 Identities=14% Similarity=0.061 Sum_probs=174.7
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCCCeEEEEeCC--Cc
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGPE--DC 370 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~~~l~s~~~d--~~ 370 (604)
...+..|.+.|.+++|+|+|++|++++ ++.|++||+... .........| ...|.+++|+|+++++++++.+ +.
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD---PSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC---CSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC---CCceEeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 345667899999999999999999987 889999999820 3333444455 4678999999999999999843 33
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEE-EEecCCeEEEEEc--CCCeeeeeec--eeEEEEEEcCCCCE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV-CGGIRGQFYQCDI--EGQVLDSWEG--VRVNCLWCRSDGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~--~~~~~~~~~~--~~v~~l~~s~~g~~ 445 (604)
..|+.|+..++... .+. ....+..++|+|+++.++ +++.++.+.+|++ .+.....+.. ..+.+++|+|+++.
T Consensus 110 ~~l~~~~~~~~~~~-~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 186 (297)
T 2ojh_A 110 SAIYLLPSTGGTPR-LMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRW 186 (297)
T ss_dssp CEEEEEETTCCCCE-ECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSE
T ss_pred ceEEEEECCCCceE-Eee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCE
Confidence 47778887776643 332 223488999999999887 7788999999986 3444444433 36899999999998
Q ss_pred EEEEe-CCCeEEEEEcC--CCcccccccCCCCeeEEEECCCCCEEEEEecC-----------CeEEEEecCCCceeeE--
Q psy10566 446 VLAAD-THHRIRTYNFE--HLTDSNLLQEDHPVMSFTIDATDRLALLNVST-----------QGVHLWDLRDRILLRK-- 509 (604)
Q Consensus 446 l~~~~-~dg~I~i~d~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~I~lwd~~~~~~~~~-- 509 (604)
+++++ .++.+++|++. ......+..+...+.+++|+|+++++++++.+ +.|++||+.+++....
T Consensus 187 l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 187 IYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp EEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred EEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 88766 48889999875 33333444456778899999999999988876 5699999998765433
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCC
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDG 539 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg 539 (604)
+.++... +..+.++|++++|++++.+.
T Consensus 267 ~~~~~~~---~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LFGGQGT---MNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEESTTT---SCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCcc---cccceECCCCCEEEEEEecc
Confidence 3344443 33456689999998887654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-19 Score=179.44 Aligned_cols=248 Identities=12% Similarity=0.148 Sum_probs=171.8
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEEC---CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSK---DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~---dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
..+...+..++|+|||+ |++++. ++.|.+|++. .+....+..+..+...+..++|+|+|++|++++..+ +.|.
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~--~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~-~~v~ 111 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQID--GQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK-GTAE 111 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEE--TTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT-TEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEec--CCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC-CEEE
Confidence 34567788899999999 555544 6899999997 445555666666778899999999999999888443 3899
Q ss_pred EEECC-Cce--EEEEecCC--------CCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeee--e---eceeEEE
Q psy10566 375 VWNIE-TEL--LRVKLNHS--------PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDS--W---EGVRVNC 436 (604)
Q Consensus 375 vwd~~-~~~--~~~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~--~---~~~~v~~ 436 (604)
+|++. ++. .+..+... ....+.+++|+|+|+.+++...++.|.+|+++ ++.... + .+..+..
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 99995 332 33333211 12248899999999966666678899999996 332211 1 1225778
Q ss_pred EEEcCCCCEEEE-EeCCCeEEEEEcCC--Ccccc--ccc-C------CCCeeEEEECCCCCEEEE-EecCCeEEEEecCC
Q psy10566 437 LWCRSDGKSVLA-ADTHHRIRTYNFEH--LTDSN--LLQ-E------DHPVMSFTIDATDRLALL-NVSTQGVHLWDLRD 503 (604)
Q Consensus 437 l~~s~~g~~l~~-~~~dg~I~i~d~~~--~~~~~--~~~-~------~~~i~~~~~s~~~~~l~~-~~~dg~I~lwd~~~ 503 (604)
++|+|+|+++++ ...++.|.+|++.. +.... ... . ...+..++|+|+|+++++ +..++.|.+||+..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999999996666 45678999999874 22111 111 1 145788999999998855 45589999999973
Q ss_pred C---ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-CcEEEE--eCCCCcce
Q psy10566 504 R---ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-GKVYIW--HVKRELPI 552 (604)
Q Consensus 504 ~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-g~I~iw--d~~~~~~~ 552 (604)
. +.+..+..+.... ..+.++|+|++|++++.+ +.|.+| |..++++.
T Consensus 272 ~g~~~~~~~~~~~~~~~---~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 272 DGHLTLIQQISTEGDFP---RDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GGCEEEEEEEECSSSCC---CEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCcEEEeEEEecCCCCc---CeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 2 3344444333222 234557999988888764 899999 55567654
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.9e-19 Score=178.50 Aligned_cols=262 Identities=11% Similarity=0.086 Sum_probs=182.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEECC----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKD----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
|...+..++|+|||++|++++.+ +.|.+|+++..++....+.....+...+..+++ +++++++++..+ +.|.+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~-~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG-GSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT-TEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC-CEEEE
Confidence 67788889999999999999876 799999998544555666666656667888888 888888877543 38999
Q ss_pred EECCCceEEEEe----c-C--------CCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCe-------ee------e
Q psy10566 376 WNIETELLRVKL----N-H--------SPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIEGQV-------LD------S 428 (604)
Q Consensus 376 wd~~~~~~~~~~----~-~--------~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~-------~~------~ 428 (604)
|++.....+... . . .+...+.+++|+|+|+++++++ .++.|.+|+++... +. .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 999754322111 1 0 1123358899999999776655 47899999985211 11 1
Q ss_pred --e-eceeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccc------cCCCCeeEEEECCCCCEEEEEecC--CeE
Q psy10566 429 --W-EGVRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLL------QEDHPVMSFTIDATDRLALLNVST--QGV 496 (604)
Q Consensus 429 --~-~~~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~~d--g~I 496 (604)
. .+..+..++|+|+|+++++++ .++.|.+||+.++...... .+......++|+|+|++++++..+ +.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1 123578899999999887777 6899999999865432111 123446799999999999777765 889
Q ss_pred EEEecC--CCc--eeeEeeccccceEEEEeeeCCCCCcEEEEEe-CCCcEEEEe--CCCCcceEEee-CCCCCeeEEEEc
Q psy10566 497 HLWDLR--DRI--LLRKFQGVTQGQFTIHSCFGGANQDFVASGS-EDGKVYIWH--VKRELPIATLS-GHTRTVSCVAWN 568 (604)
Q Consensus 497 ~lwd~~--~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd--~~~~~~~~~l~-~h~~~V~~v~~s 568 (604)
.+|++. +++ .+..+.. .. ....+.++|+|++|++++ .++.|.+|+ ..+++...... .+...+.|+.|.
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~-g~---~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLT-GI---HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEECTTTCCEEEEEEEEC-SS---CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEcCCCCcEEEeeEecC-CC---CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 999996 444 3333332 11 122345679999888887 578999964 45676544432 245678999886
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.5e-19 Score=179.46 Aligned_cols=274 Identities=8% Similarity=0.057 Sum_probs=186.5
Q ss_pred eEEEEECC--CeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC-CceEEEEecCC
Q psy10566 315 KLATGSKD--TTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE-TELLRVKLNHS 390 (604)
Q Consensus 315 ~lasgs~d--g~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~-~~~~~~~~~~~ 390 (604)
+++.|+.. +.|.+|+++..++....+.... .....+..++|+|++++|++++.+ .|.+|++. +++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEee
Confidence 35566653 5788888864455544444332 234568899999999999888876 69999997 77654432211
Q ss_pred CCCCeEEEEEecCCCE--EEEEe-------------cCCeEEEEEcC--CCeeeeee------ceeEEEEEEcCCCCEEE
Q psy10566 391 PEDSLTSCSWNRDGTK--FVCGG-------------IRGQFYQCDIE--GQVLDSWE------GVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~--l~s~~-------------~dg~i~iwd~~--~~~~~~~~------~~~v~~l~~s~~g~~l~ 447 (604)
..+.+.+++|+|+|++ +++++ .+|.+.+|+++ ++...... +..+.+++|+|+|++++
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 1123566899999995 44553 68999999994 55443332 34688999999999888
Q ss_pred EEeC-CCeEEEEEcC-CCcccc--ccc---CCCCeeEEEECCCCCEEEEEec-CCeEEEEecC--CCcee---eEeeccc
Q psy10566 448 AADT-HHRIRTYNFE-HLTDSN--LLQ---EDHPVMSFTIDATDRLALLNVS-TQGVHLWDLR--DRILL---RKFQGVT 514 (604)
Q Consensus 448 ~~~~-dg~I~i~d~~-~~~~~~--~~~---~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~--~~~~~---~~~~~~~ 514 (604)
+++. ++.|++||+. +++... ... +...+..++|+|+|+++++++. ++.|.+|++. +++.. ..+....
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 7764 6799999998 554321 121 2456889999999999988775 6899999875 45442 1222111
Q ss_pred c---ceE-------EEEeee-CCCCCcEEEEEeCC-C-----cEEEEeCC-CCcceE---EeeCCCCCeeEEEEcC---C
Q psy10566 515 Q---GQF-------TIHSCF-GGANQDFVASGSED-G-----KVYIWHVK-RELPIA---TLSGHTRTVSCVAWNP---V 570 (604)
Q Consensus 515 ~---~~~-------~i~~~~-~~~~~~~l~sgs~d-g-----~I~iwd~~-~~~~~~---~l~~h~~~V~~v~~sp---~ 570 (604)
. ... ....+. ++|+|++|++++.+ + .|.+|++. +++... ....+...+..++|+| +
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcC
Confidence 1 000 233445 78999988877643 2 89999996 566543 2334555678899999 7
Q ss_pred CCcEEEEEeC-CCcEEEECCCCC
Q psy10566 571 YHQMIASVSD-DCTVRIWGPHLN 592 (604)
Q Consensus 571 ~~~~l~s~s~-Dg~I~iW~~~~~ 592 (604)
+.+|++++. ++.|.+|+++..
T Consensus 321 -g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 -DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp -TTEEEEECSSSCEEEEEEEETT
T ss_pred -CCEEEEEEcCCCeEEEEEEchh
Confidence 677777775 599999998764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-20 Score=205.25 Aligned_cols=276 Identities=12% Similarity=0.127 Sum_probs=190.8
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC---CeeEEEECCCCCeEEEEeCC-------CceEEEE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL---GVAYLAWSPDSSHLLVVGPE-------DCHELWV 375 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~spd~~~l~s~~~d-------~~~~i~v 375 (604)
+++|+|||++++++ .|++|++||+. ..+....+.+|.. .|.+++|||||++|++++.. ..+.|++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIE----TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESS----SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcC----CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence 67999999766654 69999999998 3334444554433 48999999999999988761 1248999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ce--eE-----------------
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GV--RV----------------- 434 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~--~v----------------- 434 (604)
||+.+++...... ....+..++|+|||+.|+.+. ++.|++||+.+.....+. ++ .+
T Consensus 95 ~d~~~g~~~~~~~--l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 95 YDLSNGEFVRGNE--LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp EETTTTEECCSSC--CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred EECCCCcccccee--cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9999987621111 124688999999999999885 789999999543222221 11 11
Q ss_pred EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEEcCCCccc---c------cccC
Q psy10566 435 NCLWCRSDGKSVLAADTHH----------------------------------RIRTYNFEHLTDS---N------LLQE 471 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~dg----------------------------------~I~i~d~~~~~~~---~------~~~~ 471 (604)
.+++|+|||+.|++++.|. .|++||+.++... . ...+
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 4899999999999987652 7889999886542 1 1235
Q ss_pred CCCeeEEEECCCCCEEEEEecC----CeEEEEe----cCCCceeeEe----eccccceEE--EEeeeCCCCCcEEEE--E
Q psy10566 472 DHPVMSFTIDATDRLALLNVST----QGVHLWD----LRDRILLRKF----QGVTQGQFT--IHSCFGGANQDFVAS--G 535 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd----~~~~~~~~~~----~~~~~~~~~--i~~~~~~~~~~~l~s--g 535 (604)
...+.+++|+||++.+++.... ..|.+|| +.+++....+ .++...... .....++|+|+.++. +
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 331 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS 331 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE
Confidence 6678999999998777664432 2488999 8777766555 244332210 012456799985544 4
Q ss_pred eCCC--cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC----CCcEEEECCCC
Q psy10566 536 SEDG--KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD----DCTVRIWGPHL 591 (604)
Q Consensus 536 s~dg--~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~----Dg~I~iW~~~~ 591 (604)
..+| .|++||+.+++ ...+..+...|..+.++ +++.+++++.. ++.+++|.+..
T Consensus 332 ~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 332 DKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 4555 57778887766 56666666778888777 64555555544 58899998764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-19 Score=197.49 Aligned_cols=289 Identities=11% Similarity=0.067 Sum_probs=194.1
Q ss_pred cceeecccCCC---cEEEEEEcCCCCeEEEEEC---------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC
Q psy10566 292 ETTQVLNDHCD---EVWFCKFSPDGLKLATGSK---------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359 (604)
Q Consensus 292 ~~~~~l~~H~~---~V~~v~fspdg~~lasgs~---------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~ 359 (604)
+....+.+|.. .|.+++|||||++||+++. ++.|++||+. ++.......+ ...+..++|||||
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~--~g~~~~~~~l---~~~~~~~~~SPDG 121 (719)
T 1z68_A 47 QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS--NGEFVRGNEL---PRPIQYLCWSPVG 121 (719)
T ss_dssp CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT--TTEECCSSCC---CSSBCCEEECSST
T ss_pred cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC--CCccccceec---CcccccceECCCC
Confidence 34445555544 4999999999999999876 7899999998 2222000112 2568899999999
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCe-----------------EEEEEecCCCEEEEEecCC--------
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSL-----------------TSCSWNRDGTKFVCGGIRG-------- 414 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg-------- 414 (604)
+.|+++. ++ .|++||+.++........++...| .+++|+|||+.|++++.|.
T Consensus 122 ~~la~~~-~~--~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~ 198 (719)
T 1z68_A 122 SKLAYVY-QN--NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAY 198 (719)
T ss_dssp TCEEEEE-TT--EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred CEEEEEE-CC--eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEe
Confidence 9999986 44 799999998876554333332222 4899999999999988652
Q ss_pred --------------------------eEEEEEcCCCee----ee-----e--eceeEEEEEEcCCCCEEEEEeCC----C
Q psy10566 415 --------------------------QFYQCDIEGQVL----DS-----W--EGVRVNCLWCRSDGKSVLAADTH----H 453 (604)
Q Consensus 415 --------------------------~i~iwd~~~~~~----~~-----~--~~~~v~~l~~s~~g~~l~~~~~d----g 453 (604)
.|++||+.+... .. + ....+..++|+||++.+++.... .
T Consensus 199 ~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~ 278 (719)
T 1z68_A 199 SYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVS 278 (719)
T ss_dssp EECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEE
T ss_pred eccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeE
Confidence 788999965432 11 1 22368899999998766664432 2
Q ss_pred eEEEEE----cCCCcccccc-----cCCCCee-----EEEECCCCCEEEE--EecCC--eEEEEecCCCceeeEeecccc
Q psy10566 454 RIRTYN----FEHLTDSNLL-----QEDHPVM-----SFTIDATDRLALL--NVSTQ--GVHLWDLRDRILLRKFQGVTQ 515 (604)
Q Consensus 454 ~I~i~d----~~~~~~~~~~-----~~~~~i~-----~~~~s~~~~~l~~--~~~dg--~I~lwd~~~~~~~~~~~~~~~ 515 (604)
.|.+|| ..+++...+. .+...+. .+.|+|+|+.++. +..+| .|++||+.+++ ...+..+..
T Consensus 279 ~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~ 357 (719)
T 1z68_A 279 VLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKW 357 (719)
T ss_dssp EEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSS
T ss_pred EEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCce
Confidence 488899 7776665555 3445555 7899999996655 33444 57888887766 444444333
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCC--Cc-ceEEee----CCCCCeeEEEEcCCCCcEEEEEeCC--
Q psy10566 516 GQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKR--EL-PIATLS----GHTRTVSCVAWNPVYHQMIASVSDD-- 581 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~--~~-~~~~l~----~h~~~V~~v~~sp~~~~~l~s~s~D-- 581 (604)
.+..+ .++ +++.|+..+.+ +.+++|.+.. +. ....+. +|...+..+.|+|++..++++++.+
T Consensus 358 ~v~~~--~~~--d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~ 433 (719)
T 1z68_A 358 EAINI--FRV--TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGI 433 (719)
T ss_dssp CEEEE--EEE--CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSS
T ss_pred EEEEE--EEE--eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCC
Confidence 33322 333 55555555544 7888888754 42 133443 2667788999999955556566554
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
..+.+|++.+++
T Consensus 434 p~~~l~d~~~g~ 445 (719)
T 1z68_A 434 PISTLHDGRTDQ 445 (719)
T ss_dssp CEEEEECSSSCC
T ss_pred CeEEEEECCCCC
Confidence 578899987664
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-19 Score=179.51 Aligned_cols=242 Identities=15% Similarity=0.110 Sum_probs=179.8
Q ss_pred cEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEecc-C----CCCeeEEEECCCCCeEEEEe----------
Q psy10566 303 EVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEG-H----TLGVAYLAWSPDSSHLLVVG---------- 366 (604)
Q Consensus 303 ~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~-h----~~~V~~l~~spd~~~l~s~~---------- 366 (604)
.+.+++|+|+|+++ ++++.++.|.+||+. +.+....+.. + ...+.+++|+|+|+++++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLV----TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETT----TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECC----CCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccc
Confidence 48889999999865 455567899999987 3333333332 1 23678899999999998885
Q ss_pred --CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeecee-EEEEEEcCC
Q psy10566 367 --PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVR-VNCLWCRSD 442 (604)
Q Consensus 367 --~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~-v~~l~~s~~ 442 (604)
.++ .|++||+.+++....+.. ...+.+++|+|++++++++ ++.|.+||+. ++....+.... ...+.++|+
T Consensus 111 ~~~~~--~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~d 184 (337)
T 1pby_B 111 EVQPT--RVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD 184 (337)
T ss_dssp EECCC--EEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCB
T ss_pred cccCc--eEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCC
Confidence 345 899999999988777653 3457889999999988888 6899999995 44444443221 123367888
Q ss_pred CCEEEEEeCCC------------------------eEEEEEcCCCcccc--cccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 443 GKSVLAADTHH------------------------RIRTYNFEHLTDSN--LLQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 443 g~~l~~~~~dg------------------------~I~i~d~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
++.++..+..+ .|.+||..+.+... ...+...+.+++|+|++++++++ ++.|
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v 262 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVL 262 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeE
Confidence 88765544332 46899998876531 11234567889999999999988 7999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR 560 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~ 560 (604)
++||+.+++.+..+..... +..+.++|+|+++++++.++.|++||+.+++.+..+..+.+
T Consensus 263 ~~~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 263 ESFDLEKNASIKRVPLPHS----YYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp EEEETTTTEEEEEEECSSC----CCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred EEEECCCCcCcceecCCCc----eeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 9999999988877764432 22345579999999999999999999999999888876543
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.2e-18 Score=176.55 Aligned_cols=201 Identities=12% Similarity=0.031 Sum_probs=147.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC-------C--ce---eEeeEEeccCCCCeeEEEECCCCCeEE----
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV-------T--FT---CQHRKTLEGHTLGVAYLAWSPDSSHLL---- 363 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~-------~--~~---~~~~~~l~~h~~~V~~l~~spd~~~l~---- 363 (604)
+...+..+++++++.++++++.|+ ++||+.... . .. ......+ .+...|.+++|+|++++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEe
Confidence 344688999999999999999887 899876410 0 00 0011112 3567899999999999999
Q ss_pred EEeCCCceEEEEEECCCc--------eE--EEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCC-eeeeeec
Q psy10566 364 VVGPEDCHELWVWNIETE--------LL--RVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQ-VLDSWEG 431 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~--------~~--~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~-~~~~~~~ 431 (604)
+++.|+ .|++||+.++ +. ......+|...|.+++|+|+ +..|++++.||+|++||++.. ......+
T Consensus 113 sgs~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 113 SSEYGS--IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp ETTTEE--EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred ccCCCc--eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC
Confidence 555565 8999998765 11 12333467889999999997 889999999999999999643 3333333
Q ss_pred --eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEe-cCC------e
Q psy10566 432 --VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNV-STQ------G 495 (604)
Q Consensus 432 --~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~-~dg------~ 495 (604)
..+.+++|+|+|+++++++.||.|++||.+......... +...+.+++|++++.++++.+ .+| .
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 379999999999999999999999999998322111111 123789999999888776543 333 3
Q ss_pred EEEEecCCC
Q psy10566 496 VHLWDLRDR 504 (604)
Q Consensus 496 I~lwd~~~~ 504 (604)
+++|++++.
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999865
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.1e-19 Score=192.08 Aligned_cols=231 Identities=14% Similarity=0.069 Sum_probs=175.0
Q ss_pred CCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec---CCeEEE--EE
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI---RGQFYQ--CD 420 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~i--wd 420 (604)
..+|.+++|+|||+.|++++. ++ ++.+|++.++.... +...+...+..++|+|| +.+++++. +....+ ++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g--~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEG--SVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETT--EEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCC--ceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 467999999999999999887 76 89999997766544 44344457999999999 77776664 344445 55
Q ss_pred c--CCCeeeeeeceeEEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC----
Q psy10566 421 I--EGQVLDSWEGVRVNCLWCRSDGKS-VLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---- 493 (604)
Q Consensus 421 ~--~~~~~~~~~~~~v~~l~~s~~g~~-l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---- 493 (604)
. .+..........+...+++|+|+. +++...++.+.+||+.+++...+..+.. .+++|+|||+++++++.+
T Consensus 97 ~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 97 TSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp TTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred ccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 5 554442222223446678888764 3444445556699998877665554443 889999999999988877
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC--cEEEEeCCCCcceEEeeCCCCCeeEEE-----
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG--KVYIWHVKRELPIATLSGHTRTVSCVA----- 566 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg--~I~iwd~~~~~~~~~l~~h~~~V~~v~----- 566 (604)
+.|++||+.+++.. .+..+.. .+....++|||++|++++.+| .|++||+.+++.. .+.+|...+..++
T Consensus 175 ~~i~~~d~~~g~~~-~l~~~~~---~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR-VFDSGEG---SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp EEEEEEETTTCCCE-EECCSSC---EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred eEEEEEcCCCCCce-EeecCCC---ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 78999999888754 5555554 335566789999999888888 8999999999887 7888888787777
Q ss_pred ---EcCCCCcEEEEEeCCCcEEEECC
Q psy10566 567 ---WNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 567 ---~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|+|+ +.++++++.||++++|++
T Consensus 250 ~~~~spd-g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 250 WLGYLPD-GRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTT-SCEEEEEEETTEEEEEET
T ss_pred ceeEcCC-CcEEEEEEcCCcEEEEEE
Confidence 9999 599999999999999998
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=177.47 Aligned_cols=282 Identities=13% Similarity=0.014 Sum_probs=184.5
Q ss_pred ceeecccCCCc-----EEEEEEcCCCCeEEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCC-eeEEEECCCCCeEE
Q psy10566 293 TTQVLNDHCDE-----VWFCKFSPDGLKLATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLG-VAYLAWSPDSSHLL 363 (604)
Q Consensus 293 ~~~~l~~H~~~-----V~~v~fspdg~~lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~-V~~l~~spd~~~l~ 363 (604)
.+..+..+... +.+++|||||++|+.++.. ..|.+||+. ++ +. ..+..+... ...+.|+|||++|+
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~--~~--~~-~~l~~~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 22 KVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLE--TQ--QA-VQLTEGKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT--TT--EE-EECCCSSCBCTTTCEECTTSSEEE
T ss_pred ceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECC--CC--cE-EEeecCCCCccccceECCCCCEEE
Confidence 34455544333 7788999999998877543 367888876 22 22 223333333 33478999999999
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCCCCeEE-------------------EEEecCCCEEEEE-----ecCCeEEEE
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTS-------------------CSWNRDGTKFVCG-----GIRGQFYQC 419 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~iw 419 (604)
.++.++ .|++||+.+++....... +...... +.|+|+++.++.+ ..+..|++|
T Consensus 97 ~~~~~~--~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 97 YVKNEL--NLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEETTT--EEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEcCC--cEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 999887 799999998876544431 2222222 3467777766654 356689999
Q ss_pred EcCCCeeeeeec--eeEEEEEEcC-CCCEEEEEeCC------CeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEE
Q psy10566 420 DIEGQVLDSWEG--VRVNCLWCRS-DGKSVLAADTH------HRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLAL 488 (604)
Q Consensus 420 d~~~~~~~~~~~--~~v~~l~~s~-~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~ 488 (604)
|+.+........ ..+..+.|+| +++.++..+.+ ..|.+||+.+.....+..+ ...+..++|+|+|+.|+
T Consensus 174 d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 174 DIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp ETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEE
T ss_pred ECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEE
Confidence 996433333222 3588899999 78877766543 3688999876654444442 23577899999999887
Q ss_pred EEecC-----CeEEEEecCCCceeeEeeccccceEEEEeeeCCC-CCcEEEEEe----------------CCCcEEEEeC
Q psy10566 489 LNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA-NQDFVASGS----------------EDGKVYIWHV 546 (604)
Q Consensus 489 ~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs----------------~dg~I~iwd~ 546 (604)
..+.+ +.|++||+.+++........ . . . ..++| +|+++++++ .++.|++||.
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~-~---~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLENEEVMVMP-P-C-S---HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCCEEEEEECC-S-E-E---EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred EEecCCCCccceEEEEECCCCCeEEeeeCC-C-C-C---CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 77554 44999999888654332211 1 1 1 33457 999888765 3478999999
Q ss_pred CCCcceEEeeCCCC-----------CeeEEEEcCCCCcEEEEEe-CCCcEEEECCC
Q psy10566 547 KRELPIATLSGHTR-----------TVSCVAWNPVYHQMIASVS-DDCTVRIWGPH 590 (604)
Q Consensus 547 ~~~~~~~~l~~h~~-----------~V~~v~~sp~~~~~l~s~s-~Dg~I~iW~~~ 590 (604)
.+++.. .+..+.. .+..++|+|+ +..|+.++ .++...+|.++
T Consensus 328 ~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 328 KAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEE
T ss_pred ccCceE-EccCCCCccccccccccCCCCCceEccC-CCeEEEEecCCCCceEEEEE
Confidence 988753 4544544 2567899999 55555554 46666666543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-18 Score=186.17 Aligned_cols=290 Identities=9% Similarity=0.005 Sum_probs=202.0
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEE--ECCCeEEEEEeCCCCceeEeeEEeccCCCCee---------EEEEC--CCCCe
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATG--SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA---------YLAWS--PDSSH 361 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasg--s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~---------~l~~s--pd~~~ 361 (604)
..+.+|...|..++|++++-++++. +.++...||.... . .....+..|...+. ...|+ |||+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRA-D---GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECT-T---SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECC-C---CCcceeCCCCccccccccccCCccceeeeecCCCe
Confidence 4577899999999999887777777 5688999999742 1 22455666766666 66665 99999
Q ss_pred -EEEEeCCCceEEEEEECC--C-ceEEEEecCC----CCCCeEEEEEecCCCEEEEEecC----------CeEEEEEcCC
Q psy10566 362 -LLVVGPEDCHELWVWNIE--T-ELLRVKLNHS----PEDSLTSCSWNRDGTKFVCGGIR----------GQFYQCDIEG 423 (604)
Q Consensus 362 -l~s~~~d~~~~i~vwd~~--~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~ 423 (604)
|+.++... ..|++|++. + +... .+... +...+.+++|+|||+.|++++.+ ..|++||+++
T Consensus 93 ~la~~~~~~-~~l~~~~~~~~g~~~~~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 93 LLVFTHFGD-QRLYAFEPDAPGGAVPR-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEEBTTT-CCEEEECTTSTTCCCCE-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EEEEEECCC-CeEEEEcCCCCCCCCCE-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 77666532 478888887 3 4433 33321 45678899999999999998877 5899999976
Q ss_pred ------Ceeeeee-c--eeEEEEEEcCCCCEEEEEeCC--------CeEEEEEcC-CC---cccccccC-CCCeeEEEEC
Q psy10566 424 ------QVLDSWE-G--VRVNCLWCRSDGKSVLAADTH--------HRIRTYNFE-HL---TDSNLLQE-DHPVMSFTID 481 (604)
Q Consensus 424 ------~~~~~~~-~--~~v~~l~~s~~g~~l~~~~~d--------g~I~i~d~~-~~---~~~~~~~~-~~~i~~~~~s 481 (604)
.....+. . ..+..++|+|||+.|+.++.+ ..|++||+. ++ ....+... ...+..+.|+
T Consensus 171 ~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 171 SAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp TTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred CccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 4444444 3 357788999999999888755 379999998 45 34444443 5788999999
Q ss_pred CCCCEEEEEecCC--eEEEEecCCCceeeEeeccccceE-----EEEeeeCCCCCcEEEEEeCCCcEEEE--eCCCCcce
Q psy10566 482 ATDRLALLNVSTQ--GVHLWDLRDRILLRKFQGVTQGQF-----TIHSCFGGANQDFVASGSEDGKVYIW--HVKRELPI 552 (604)
Q Consensus 482 ~~~~~l~~~~~dg--~I~lwd~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~sgs~dg~I~iw--d~~~~~~~ 552 (604)
|||++++++..++ .|++||+.+++.......+..... .+..+.++++++++++++. +.++|| |..+++ +
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~ 328 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-L 328 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-E
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-E
Confidence 9999777777777 677777767665443332221100 0122344588999999998 999999 555555 6
Q ss_pred EEeeCCCCCeeEE-EEcCCCCcEEEEEeCCCc--EEEECCCCCC
Q psy10566 553 ATLSGHTRTVSCV-AWNPVYHQMIASVSDDCT--VRIWGPHLNT 593 (604)
Q Consensus 553 ~~l~~h~~~V~~v-~~sp~~~~~l~s~s~Dg~--I~iW~~~~~~ 593 (604)
..+..|...+..+ +++++ ..++++++.+.. |.+|++.+++
T Consensus 329 ~~l~~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 329 VDAAGPWTEWAATLTVSGT-RAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EECCSSCCEEEEEEEEETT-EEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEecCCCCeEEEEEecCCC-EEEEEEcCCCCCCEEEEEECCCCc
Confidence 7888888888877 66544 344555566654 4445555543
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-18 Score=177.45 Aligned_cols=209 Identities=11% Similarity=0.104 Sum_probs=156.8
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-----------Ceeeeee-------cee
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-----------QVLDSWE-------GVR 433 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----------~~~~~~~-------~~~ 433 (604)
.+++|+.... .....+..+++++++.++++++.++ +++|+... ..+.... ...
T Consensus 24 ~vri~~~~~~--------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 24 KVRIFDSPEE--------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp EEECSCCCSS--------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eEEecCCccc--------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 5777764321 1234578999999999999999888 88887521 1111111 125
Q ss_pred EEEEEEcCCCCEEE----EEeCCCeEEEEEcCCC-----cc-------cccccCCCCeeEEEECCC-CCEEEEEecCCeE
Q psy10566 434 VNCLWCRSDGKSVL----AADTHHRIRTYNFEHL-----TD-------SNLLQEDHPVMSFTIDAT-DRLALLNVSTQGV 496 (604)
Q Consensus 434 v~~l~~s~~g~~l~----~~~~dg~I~i~d~~~~-----~~-------~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~I 496 (604)
|.+++|+|+|++++ +++.|+.|++||+.+. .. .....|...|.+++|+|+ +.++++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 7788999999998764 11 112236789999999998 7899999999999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC-------CCeeEEEEcC
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT-------RTVSCVAWNP 569 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-------~~V~~v~~sp 569 (604)
++||++++..+....+|... +.++.|+|+|++|++|+.||.|++||.+ ++....+..|. ..|.+++|++
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~---v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVA---VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEEEESSSEEEEEEECGGGC---EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred EEEEcCCCcceeeccCCCCc---eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 99999998777666676664 4455668999999999999999999998 66666665442 3799999999
Q ss_pred CCCcEEEE-EeCCCc------EEEECCCCCCC
Q psy10566 570 VYHQMIAS-VSDDCT------VRIWGPHLNTN 594 (604)
Q Consensus 570 ~~~~~l~s-~s~Dg~------I~iW~~~~~~~ 594 (604)
+ ..++++ ++.||. +++|++.....
T Consensus 251 ~-~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~ 281 (434)
T 2oit_A 251 T-YVFAIVYAAADGTLETSPDVVMALLPKKEE 281 (434)
T ss_dssp T-TEEEEEEEETTCCSSSCCEEEEEECCCTTT
T ss_pred C-ceEEEEEccCCCccCCCCceEEEEeccCCC
Confidence 8 555543 445543 89999987643
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=189.81 Aligned_cols=276 Identities=12% Similarity=0.121 Sum_probs=185.1
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC-----eeEEEECCCCCeEEEEeCCCc-------
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG-----VAYLAWSPDSSHLLVVGPEDC------- 370 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~-----V~~l~~spd~~~l~s~~~d~~------- 370 (604)
...+++|+|||++++++ |++|++||+. +......+.+|... ...++|||||++|+.++.+..
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAE----YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETT----TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECC----CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 45578999999999986 9999999998 33344556666532 234889999999999887531
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ce--eE------------
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GV--RV------------ 434 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~--~v------------ 434 (604)
+.+++||+.+++... +. .+...+...+|+|||+.|+.+ .++.|++|++.+.....+. +. .+
T Consensus 92 ~~~~~~d~~~~~~~~-l~-~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EE-RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEEEEETTTTEECC-SS-CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred eEEEEEECCCCcEEE-cc-cCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 367899999998653 32 455679999999999999888 4789999999543333221 21 11
Q ss_pred -----EEEEEcCCCCEEEEEeCCC------------------------------------eEEEEEcCC---C---cccc
Q psy10566 435 -----NCLWCRSDGKSVLAADTHH------------------------------------RIRTYNFEH---L---TDSN 467 (604)
Q Consensus 435 -----~~l~~s~~g~~l~~~~~dg------------------------------------~I~i~d~~~---~---~~~~ 467 (604)
..++|||||+.|+.++.|. .|++||+.+ + ....
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 2489999999998875321 588899988 6 3222
Q ss_pred ccc------CCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCc----ee--eEe--eccccceEE--EEeeeCCC
Q psy10566 468 LLQ------EDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRI----LL--RKF--QGVTQGQFT--IHSCFGGA 527 (604)
Q Consensus 468 ~~~------~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~----~~--~~~--~~~~~~~~~--i~~~~~~~ 527 (604)
+.. +...+..++|+|||+.++..... ..|++||+.+++ +. ..+ .++...+.. .....++|
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 222 55668899999999977665442 369999999887 22 222 233322110 11244579
Q ss_pred CCcEEE-EEeC-C--CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC----CCcEEEECC
Q psy10566 528 NQDFVA-SGSE-D--GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD----DCTVRIWGP 589 (604)
Q Consensus 528 ~~~~l~-sgs~-d--g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~----Dg~I~iW~~ 589 (604)
||+.++ ..++ + ..|++||..+++.. .+......|..+.+ ++++.++++++. .+...||.+
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 999877 6664 3 46888998876654 44444555666542 333566666655 244555544
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-16 Score=162.30 Aligned_cols=265 Identities=11% Similarity=0.082 Sum_probs=190.1
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAW 355 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~ 355 (604)
+.+..+..+..+ .++|+|||+++++++ .+++|.+||.. +.+....+.. +......++|
T Consensus 42 ~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~----t~~~~~~i~~~~~~~~~g~~p~~i~~ 115 (361)
T 2oiz_A 42 KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD----KLTFEKEISLPPKRVQGLNYDGLFRQ 115 (361)
T ss_dssp CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT----TCCEEEEEEECTTBCCBCCCGGGEEE
T ss_pred eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc----CCcEEEEEEcCccccccCCCcceEEE
Confidence 445566666655 899999999998886 36789999987 3444444432 2345778999
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEE-ecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcC--CCeeeeee-
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVK-LNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIE--GQVLDSWE- 430 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~--~~~~~~~~- 430 (604)
+|||++|+++......+|.+||+.+++.+.. +... ....+.+.|++ ..+++.+.||.+.+|+.+ ++......
T Consensus 116 spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~---~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~ 192 (361)
T 2oiz_A 116 TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA---GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRS 192 (361)
T ss_dssp CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT---TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEEC
T ss_pred CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC---CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccc
Confidence 9999999998754224899999999988877 5522 23346677865 678888999999999883 44442111
Q ss_pred -----ce-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-----c-----C---CCCeeEEEECCCCCEEEEEe
Q psy10566 431 -----GV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-----Q-----E---DHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 431 -----~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-----~-----~---~~~i~~~~~s~~~~~l~~~~ 491 (604)
.. ....+.+++++..++..+.++.+.++|+......... . . ......++++|+++.++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~ 272 (361)
T 2oiz_A 193 KQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFM 272 (361)
T ss_dssp CCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEE
T ss_pred cceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEE
Confidence 10 1112234567777888888999999998754321100 0 0 11122378999998888875
Q ss_pred c-----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC--cceEEeeCC
Q psy10566 492 S-----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE--LPIATLSGH 558 (604)
Q Consensus 492 ~-----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~--~~~~~l~~h 558 (604)
. .+.|.+||+.+++.+.++..+. . ..+.++|+|+++++++. +.|.+||..++ +.+.++..+
T Consensus 273 ~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p---~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~ 346 (361)
T 2oiz_A 273 HPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--A---LSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA 346 (361)
T ss_dssp ESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--C---CEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS
T ss_pred ccCCCcccccCCCceEEEEECCCCcEEEEEecCC--e---eEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC
Confidence 4 3489999999999999988765 2 23455799999998887 99999999999 999998777
Q ss_pred CCCeeEEEEcCCC
Q psy10566 559 TRTVSCVAWNPVY 571 (604)
Q Consensus 559 ~~~V~~v~~sp~~ 571 (604)
......++++|++
T Consensus 347 G~~P~~~~~~p~G 359 (361)
T 2oiz_A 347 AEASLQVQFHPVG 359 (361)
T ss_dssp CSSEEEEEECCCS
T ss_pred CCCcEEEEecCCC
Confidence 7888999999984
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.4e-16 Score=150.57 Aligned_cols=243 Identities=11% Similarity=0.143 Sum_probs=179.5
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec------cCCCCeeEEEE-CCCCCeEEEEeC-CC
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE------GHTLGVAYLAW-SPDSSHLLVVGP-ED 369 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~------~h~~~V~~l~~-spd~~~l~s~~~-d~ 369 (604)
.+|-..+.+++++++|.++++.+.++.|.+||.+ . .....+. ++...+..+++ .+++..+++... ++
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~--g---~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~ 100 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE--G---RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH 100 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT--S---CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC--C---cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence 4566789999999999988888889999999976 1 1223332 34467899999 567766665533 55
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec----eeEEEEEEcCCCCE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG----VRVNCLWCRSDGKS 445 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~v~~l~~s~~g~~ 445 (604)
.|.+|| .+++....+...+...+.+++++++|+.+++...++.|.+||.+++.+..+.. ..+..++++++|+.
T Consensus 101 --~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 101 --QIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp --EEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred --EEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 799999 56666666654455678999999999988887888999999998887777642 25889999999998
Q ss_pred EEEEeCCCeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecCC-eEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQ-GVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg-~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
+++...++.|++||............ ...+..++++++|+++++...++ .|.+||. +++.+..+..+..... ...
T Consensus 178 ~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~~ 255 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQ-CFD 255 (286)
T ss_dssp EEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSC-EEE
T ss_pred EEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCc-cee
Confidence 87778899999999855432222222 25688999999998888887776 9999995 5666666665433221 223
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
+.++++|+++++ +.|++|++|+.....+
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred EEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 445689987777 5799999999876443
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-16 Score=158.56 Aligned_cols=240 Identities=10% Similarity=0.038 Sum_probs=182.1
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCc----------------------eEEEEEECCCceEEEEecCCCCCCeEEEEEecCC
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDC----------------------HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG 404 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~----------------------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 404 (604)
-..+.+++++|+|+.+++...+.. +.|.+||..+++....+...+-..+..++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 357899999999998888776621 2699999999988777665555678999999999
Q ss_pred CEEEEEecCCeEEEEEcCCC--eeeeee---------c--eeEEEEEEcC-CCCEEEEEe-CCCeEEEEEcCCCcccccc
Q psy10566 405 TKFVCGGIRGQFYQCDIEGQ--VLDSWE---------G--VRVNCLWCRS-DGKSVLAAD-THHRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 405 ~~l~s~~~dg~i~iwd~~~~--~~~~~~---------~--~~v~~l~~s~-~g~~l~~~~-~dg~I~i~d~~~~~~~~~~ 469 (604)
+.+++...++.|+.||.++. .+..+. + .....++++| ++..+++.+ .++.|++||... .....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-KFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-CEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-CEEEEe
Confidence 98888888999999999876 455442 1 1588999999 788777776 689999999543 333322
Q ss_pred c-C----------CCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeecc--ccceEEEEeeeCCCCCcEEEE-
Q psy10566 470 Q-E----------DHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGV--TQGQFTIHSCFGGANQDFVAS- 534 (604)
Q Consensus 470 ~-~----------~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~s- 534 (604)
. . -.....++++|+ +.++++...++.|++||..+++.+..+... ...... +.++| +..+++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~---~~~~p-g~~~~~~ 257 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFA---ISYIP-GFLFAVN 257 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEE---EEEET-TEEEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcce---eeecC-CEEEEeC
Confidence 2 1 123789999998 677777777899999999988888887533 222232 33345 333333
Q ss_pred ------EeCCCcEEEEeCCCCcceEEee---CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 535 ------GSEDGKVYIWHVKRELPIATLS---GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 535 ------gs~dg~I~iwd~~~~~~~~~l~---~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+.++.|++||..+++.+..+. ++...+.+++++|+ +.++++...++.|++|++...
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d-G~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED-GTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT-SEEEEEESSSCCEEEEEEEEC
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC-CCEEEEECCCCEEEEEeCCcc
Confidence 3345689999999999998873 67778999999999 689999999999999998754
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-16 Score=162.50 Aligned_cols=262 Identities=8% Similarity=0.058 Sum_probs=179.7
Q ss_pred CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC--------CCceEEEEEECCCceEEEEecCC--
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP--------EDCHELWVWNIETELLRVKLNHS-- 390 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~--------d~~~~i~vwd~~~~~~~~~~~~~-- 390 (604)
.|+.|.+||.. +.+....+..+..+ .++|+||+++++++.. +....|.+||..+++....+...
T Consensus 29 ~d~~v~v~D~~----t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYT----NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEETT----TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred ccCeEEEEECC----CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 47899999987 44455666666555 8999999999998863 11237999999998887766522
Q ss_pred ---CCCCeEEEEEecCCCEEEEEec--CCeEEEEEcC-CCeeee-eeceeEEEEEEcCCC-CEEEEEeCCCeEEEEEcCC
Q psy10566 391 ---PEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIE-GQVLDS-WEGVRVNCLWCRSDG-KSVLAADTHHRIRTYNFEH 462 (604)
Q Consensus 391 ---~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~-~~~~~~-~~~~~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~ 462 (604)
+......++|+|+|++++++.. ++.|.+||+. ++.+.. +.......+.+.|++ ..+++.+.||.+.+|+...
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 1235678999999999999875 5799999995 444444 332222335567765 6778888999999998865
Q ss_pred -Cccc------ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce--eeEeeccc-----cc--eEEEEeeeCC
Q psy10566 463 -LTDS------NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL--LRKFQGVT-----QG--QFTIHSCFGG 526 (604)
Q Consensus 463 -~~~~------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~--~~~~~~~~-----~~--~~~i~~~~~~ 526 (604)
++.. ..+........+.+++++..++..+.++.|.++|+..... ...+.... .. ......+.++
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred CCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 3222 1111111122333456777888888899999999875532 12221100 00 0000012345
Q ss_pred CCCcEEEEEeC-----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 527 ANQDFVASGSE-----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 527 ~~~~~l~sgs~-----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++++.++++.. .+.|.+||..+++.+.++..+. +.+++|+|+ +++|++++. ++|.+||..++
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spd-g~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQ-RNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETT-TTEEEEECS-SCEEEEECSSS
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCC-CCEEEEeCC-CeEEEEECCCC
Confidence 88777766543 3489999999999999999887 999999999 678887776 99999999987
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-16 Score=158.85 Aligned_cols=242 Identities=12% Similarity=0.036 Sum_probs=167.3
Q ss_pred cceeecccCC-CcEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccC------CCCeeEEEECCCCCeEE
Q psy10566 292 ETTQVLNDHC-DEVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGH------TLGVAYLAWSPDSSHLL 363 (604)
Q Consensus 292 ~~~~~l~~H~-~~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h------~~~V~~l~~spd~~~l~ 363 (604)
+....+..+. ..+..++|+|+|++++ +++.++.|.+||+. +.+....+..+ ...+.+++|+|+|++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~----t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 107 (349)
T 1jmx_B 32 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD----TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVY 107 (349)
T ss_dssp EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT----TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEE
T ss_pred cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC----CCcEEEEEEcccccccccccccceEECCCCCEEE
Confidence 3444554433 2578899999998654 55578999999987 33344444322 23478999999999999
Q ss_pred EEeCC------------CceEEEEEECCCceE---EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeee
Q psy10566 364 VVGPE------------DCHELWVWNIETELL---RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLD 427 (604)
Q Consensus 364 s~~~d------------~~~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~ 427 (604)
+++.+ + .|.+||+.+++. ..... +...+.+++|+|+|+ +++++. .|.+||.. ++...
T Consensus 108 ~~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 108 ATVNPTQRLNDHYVVKPP--RLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTV 180 (349)
T ss_dssp EEEEEEEECSSCEEECCC--EEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEE
T ss_pred EEcccccccccccccCCC--eEEEEECCCccccceeeecc--CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceec
Confidence 98865 4 899999988542 22232 234588999999999 555543 49999994 55555
Q ss_pred eeece--------------------------eEEEEEEcCCCC-----------EEEEEeCCCeEEEEEcCCCccccccc
Q psy10566 428 SWEGV--------------------------RVNCLWCRSDGK-----------SVLAADTHHRIRTYNFEHLTDSNLLQ 470 (604)
Q Consensus 428 ~~~~~--------------------------~v~~l~~s~~g~-----------~l~~~~~dg~I~i~d~~~~~~~~~~~ 470 (604)
.+... ....+++++++. ++......+.+.+|++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 252 (349)
T 1jmx_B 181 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD-------- 252 (349)
T ss_dssp EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE--------
T ss_pred cccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc--------
Confidence 44321 344566665542 112333345555555522
Q ss_pred CCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 471 EDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 471 ~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
....+..++++| ++++++++ ++.|.+||+.+++.+..+..... +..+.+++++++|++++.++.|++||..++
T Consensus 253 ~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 253 LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT----YYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC----CCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC----ccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 345688999999 99999988 88999999999988877764332 123455799998888888999999999999
Q ss_pred cceEEeeCC
Q psy10566 550 LPIATLSGH 558 (604)
Q Consensus 550 ~~~~~l~~h 558 (604)
+.+..+..+
T Consensus 327 ~~~~~~~~~ 335 (349)
T 1jmx_B 327 EKVKNIKLP 335 (349)
T ss_dssp EEEEEEECS
T ss_pred ceeeeeecC
Confidence 988888755
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-16 Score=161.48 Aligned_cols=242 Identities=12% Similarity=0.108 Sum_probs=163.9
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCe--EEEEe-----------
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH--LLVVG----------- 366 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~--l~s~~----------- 366 (604)
+...+..++|+|||++|++++.+ .|.+|++.. ++..........+ +.+.+++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~-~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKS-PTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEE-TTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECC-CCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 34468889999999999999888 999999861 1222222222212 23567899999995 44442
Q ss_pred --CCCceEEEEEECC-CceEEEEec---CCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcC--CCee--eeee----c
Q psy10566 367 --PEDCHELWVWNIE-TELLRVKLN---HSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIE--GQVL--DSWE----G 431 (604)
Q Consensus 367 --~d~~~~i~vwd~~-~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~--~~~~--~~~~----~ 431 (604)
.++ .+.+|++. +++....+. ..+...+.+++|+|+|+++++++. ++.|.+|+++ ++.. ..+. +
T Consensus 115 ~~~~g--~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 115 YKFAG--YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp SSSCC--EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred ecCCc--eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 355 89999997 455433322 124467899999999998887764 6799999996 4432 2232 3
Q ss_pred eeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCC--Cccc------ccccCC----C-------CeeEEE-ECCCCCEEEEE
Q psy10566 432 VRVNCLWCRSDGKSVLAADT-HHRIRTYNFEH--LTDS------NLLQED----H-------PVMSFT-IDATDRLALLN 490 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~--~~~~------~~~~~~----~-------~i~~~~-~s~~~~~l~~~ 490 (604)
..+..++|+|+|+++++++. ++.|.+|++.. ++.. ..+... . .+..++ |+|+|++++++
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEE
Confidence 46889999999999888775 68999998753 3321 111111 1 478899 99999998877
Q ss_pred ecCC------eEEEEecC-CCceeeE---eeccccceEEEEeeeCCC---CCcEEEEEeCC-CcEEEEeCCCC
Q psy10566 491 VSTQ------GVHLWDLR-DRILLRK---FQGVTQGQFTIHSCFGGA---NQDFVASGSED-GKVYIWHVKRE 549 (604)
Q Consensus 491 ~~dg------~I~lwd~~-~~~~~~~---~~~~~~~~~~i~~~~~~~---~~~~l~sgs~d-g~I~iwd~~~~ 549 (604)
..+. .|.+|++. +++.... ...+... ...+.++| +|++|++++.+ +.|.+|++...
T Consensus 273 ~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~---~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 273 SRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG---GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC---TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC---cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 6533 89999996 5654331 2222111 12234457 79999998864 89999998765
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-16 Score=158.28 Aligned_cols=259 Identities=14% Similarity=0.201 Sum_probs=175.2
Q ss_pred CcEEEEEEcCCCCeEEEEE---------CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC---C
Q psy10566 302 DEVWFCKFSPDGLKLATGS---------KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE---D 369 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs---------~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d---~ 369 (604)
..+...++ ||+++|... .++.|.+|++. ++.. ..+ ..+..++|||||++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~---~~l----~~~~~~~~SpDg~~la~~~~~~~~~ 83 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLK--NNAR---RFI----ENATMPRISPDGKKIAFMRANEEKK 83 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETT--TCCE---EEE----ESCEEEEECTTSSEEEEEEEETTTT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCC--CCce---EEc----ccCCCeEECCCCCEEEEEEeccCCC
Confidence 45677778 888887642 25678999987 2222 222 468899999999999987754 3
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC---------------------------CeEEEEEcC
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---------------------------GQFYQCDIE 422 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~iwd~~ 422 (604)
...|++||+.+++....... .. +..++|+|||+.|+.++.+ ..|++||+.
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEA--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE--SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred cceEEEEECCCCceEEEEcC--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 34699999998876555442 23 8999999999999888743 578899996
Q ss_pred CCee-eeeeceeEEEEEEcCCCCEEEEEeCCC-------eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC-
Q psy10566 423 GQVL-DSWEGVRVNCLWCRSDGKSVLAADTHH-------RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST- 493 (604)
Q Consensus 423 ~~~~-~~~~~~~v~~l~~s~~g~~l~~~~~dg-------~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 493 (604)
+... ..+....+..+.|+|+| .++++..++ ...+|.+.+++...+..+ ..+..+ +|+|+.++.++.+
T Consensus 161 ~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 161 SEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp TTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred CCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 5433 43332267788999999 777775542 334443334443333333 444443 9999998887754
Q ss_pred -------CeEEEEecCCCceeeEeeccccceEEEEe-eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEE
Q psy10566 494 -------QGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCV 565 (604)
Q Consensus 494 -------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v 565 (604)
..|++|| +++.......+.. .+.. ..++ ++ ++++++.++.++|| +.+++. ..+..+.+.|.++
T Consensus 237 ~~~~~~~~~l~~~d--~~~~~~l~~~~~~---~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~ 307 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEVMGILDEVDR---GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGF 307 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCEEESSTTCCS---EEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEE
T ss_pred cCCccccceEEEEC--CCceEeccccCCc---ccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEee
Confidence 3688888 5554433333333 2332 4556 77 89999999999999 876665 4444567889999
Q ss_pred EEcCCCCcEEEEEeCCCcE-EEECCC
Q psy10566 566 AWNPVYHQMIASVSDDCTV-RIWGPH 590 (604)
Q Consensus 566 ~~sp~~~~~l~s~s~Dg~I-~iW~~~ 590 (604)
+|+| .++++++.++.. .+|.++
T Consensus 308 ~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 308 DVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EESS---SEEEEEECSSSCCEEEEES
T ss_pred eeeC---cEEEEEcCCCChHHheEeC
Confidence 9998 467777776654 677665
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-16 Score=155.10 Aligned_cols=267 Identities=14% Similarity=0.164 Sum_probs=187.3
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
..|.+++|++++..++..+.++.++.|.- .....+..+...+.+++|+|+++.++++..++ .|++||..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~--~i~~~d~~~~ 76 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA-------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEG--NIFKINPETK 76 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC-------EEEEEEESSCCCEEEEEECTTSCEEEEETTTC--EEEEECTTTC
T ss_pred cccceeeecCCccceeEEeecccCccccc-------ceeEEEeccCccccCcEECCCCCEEEEECCCC--EEEEEeCCCC
Confidence 34777889999888877788889999932 23455666777789999999999777777666 8999999988
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCeee-ee----eceeEEEEEEcCCCCEEEEEeC-
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR----GQFYQCDIEGQVLD-SW----EGVRVNCLWCRSDGKSVLAADT- 451 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~-~~----~~~~v~~l~~s~~g~~l~~~~~- 451 (604)
+...... .+...+.+++|+|+|+.+++...+ +.|.+||.++.... .. ....+.+++++|+|+.+++...
T Consensus 77 ~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 77 EIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp CEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred cEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 7655432 245679999999999988877766 68999999765443 22 1236889999999987776653
Q ss_pred -----CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCC-CceeeEee-----ccccceEE
Q psy10566 452 -----HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRD-RILLRKFQ-----GVTQGQFT 519 (604)
Q Consensus 452 -----dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~-~~~~~~~~-----~~~~~~~~ 519 (604)
.+.|..+|..+.+..........+..++++|+++.++++ ..++.|.+||+.+ +.....+. ..... ..
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~ 234 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EG 234 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SE
T ss_pred cccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CC
Confidence 356777776554443333334457889999999866554 4578999999964 33332211 00110 12
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC------CeeEEEEcCCCCcEEEEEeC
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR------TVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~------~V~~v~~sp~~~~~l~s~s~ 580 (604)
...+.++++|+++++...++.|.+||. +++.+..+..+.. .+.+++|+|+++.+++++..
T Consensus 235 ~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 235 PDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 333555688998888888899999998 4677777765433 68999999984344444443
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.2e-15 Score=146.35 Aligned_cols=240 Identities=10% Similarity=0.075 Sum_probs=175.9
Q ss_pred cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecC-----CCCCCeEEEEEe-cCCCEEEEEec-CCeEE
Q psy10566 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH-----SPEDSLTSCSWN-RDGTKFVCGGI-RGQFY 417 (604)
Q Consensus 345 ~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~~~l~s~~~-dg~i~ 417 (604)
++-..+.+++++|++..+++...++ .|.+||.. +.....+.. .+...+..+++. +++..+++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~--~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNH--RIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGT--EEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCC--EEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 4556789999999998877777776 89999987 555554432 233468899995 66666666543 88999
Q ss_pred EEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEec
Q psy10566 418 QCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 418 iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
+||.+++.+..+.. ..+..++++++|+.+++...++.|.+||.......... .....+..++++++++.+++...
T Consensus 104 ~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 104 IYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred EECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 99988888776643 36889999999998887778899999996543222221 23356889999999998777778
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC-cEEEEeCCCCcceEEeeCCC--CCeeEEEEcC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG-KVYIWHVKRELPIATLSGHT--RTVSCVAWNP 569 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg-~I~iwd~~~~~~~~~l~~h~--~~V~~v~~sp 569 (604)
++.|++||. +++.+..+...... .....+.++++|+++++...++ .|.+||. +++.+..+..+. ..+.+++++|
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~-~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGIT-NYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTS-CSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred CCEEEEEcC-CCCEEEEEccCCcc-CCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC
Confidence 999999997 45555555433211 1223345568999888888776 9999995 567777776553 3478999999
Q ss_pred CCCcEEEEEeCCCcEEEECCCCC
Q psy10566 570 VYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 570 ~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+ +.++++ +.|++|++|++...
T Consensus 261 ~-g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 261 D-GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp T-TEEEEE-ETTTEEEEEECSCC
T ss_pred C-CcEEEE-CCCCeEEEEEcccc
Confidence 8 677777 57999999998654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.1e-16 Score=153.69 Aligned_cols=241 Identities=11% Similarity=0.088 Sum_probs=176.0
Q ss_pred CCcEEEEEEcCCCCeEEEEECC------------------------CeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEE
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKD------------------------TTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAW 355 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~d------------------------g~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~ 355 (604)
-+.|.+++++|+|+++++.+.+ ++|.+||.. +.+....+. ++-..+..+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~----~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN----NAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT----TCCEEEEECTTTCSSEEEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC----CCeEEeccCCCccCCceEEEE
Confidence 3679999999999999888777 479999986 233333333 44567899999
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCce-EEEEec--------CCCCCCeEEEEEec-CCCEEEEEe-cCCeEEEEEcCCC
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETEL-LRVKLN--------HSPEDSLTSCSWNR-DGTKFVCGG-IRGQFYQCDIEGQ 424 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~-~~~~~~--------~~~~~~v~~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~ 424 (604)
+|+|+.+++...++ .|++||..... .+..+. ..+-.....++++| ++..+++.+ .++.|++|+.++.
T Consensus 99 d~~g~l~v~d~~~~--~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 99 DTDGNYWVTDVALH--QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp CTTSCEEEEETTTT--EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred CCCCCEEEEECCCC--EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 99999777776666 89999986552 333332 12334688999999 788888876 6899999999888
Q ss_pred eeeeeece------------eEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCccccccc---CCCCeeEEEECCCCCEEE
Q psy10566 425 VLDSWEGV------------RVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQ---EDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 425 ~~~~~~~~------------~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~ 488 (604)
.+..+... ....++++|+ +..+++...++.|++||..+++....+. ....+..++++| +..+.
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEE
Confidence 88776421 3889999998 6777777788999999998665544432 355788899999 33333
Q ss_pred EE-------ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 489 LN-------VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 489 ~~-------~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+. ..+..|++||..+++.+..+............+.++++|.++++...++.|++|++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 32 3345899999999998888742211111233345579998888988999999999763
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-15 Score=169.36 Aligned_cols=288 Identities=12% Similarity=0.086 Sum_probs=185.3
Q ss_pred cceeecccCCCc-----EEEEEEcCCCCeEEEEECC---------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC
Q psy10566 292 ETTQVLNDHCDE-----VWFCKFSPDGLKLATGSKD---------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP 357 (604)
Q Consensus 292 ~~~~~l~~H~~~-----V~~v~fspdg~~lasgs~d---------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp 357 (604)
++...+.+|... ...++|||||++|+.++.+ +.+.+||+. ++ + ...+..|...+...+|||
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~--~~--~-~~~l~~~~~~~~~~~~SP 121 (740)
T 4a5s_A 47 NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN--KR--Q-LITEERIPNNTQWVTWSP 121 (740)
T ss_dssp CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT--TT--E-ECCSSCCCTTEEEEEECS
T ss_pred ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECC--CC--c-EEEcccCCCcceeeEECC
Confidence 344556666643 2447889999999998876 566799998 22 2 234667788899999999
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCe-----------------EEEEEecCCCEEEEEecCC------
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSL-----------------TSCSWNRDGTKFVCGGIRG------ 414 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg------ 414 (604)
||+.|+.+.. + .|++|++.++........++...+ ..+.|+|||+.|+.++.|.
T Consensus 122 dG~~la~~~~-~--~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~ 198 (740)
T 4a5s_A 122 VGHKLAYVWN-N--DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLI 198 (740)
T ss_dssp STTCEEEEET-T--EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred CCCEEEEEEC-C--eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceE
Confidence 9999998864 4 699999998876554332332222 3589999999999875331
Q ss_pred ------------------------------eEEEEEcCC---C---eeeee--------eceeEEEEEEcCCCCEEEEEe
Q psy10566 415 ------------------------------QFYQCDIEG---Q---VLDSW--------EGVRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 415 ------------------------------~i~iwd~~~---~---~~~~~--------~~~~v~~l~~s~~g~~l~~~~ 450 (604)
.|++||+++ . ....+ ....+..++|+|||+.++...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~ 278 (740)
T 4a5s_A 199 EYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWL 278 (740)
T ss_dssp EEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEe
Confidence 578889865 3 33333 223588999999999766654
Q ss_pred C----CCeEEEEEcCCCc----cc---cc--ccCCCCe-----eEEEECCCCCEEE-EEec-CC--eEEEEecCCCceee
Q psy10566 451 T----HHRIRTYNFEHLT----DS---NL--LQEDHPV-----MSFTIDATDRLAL-LNVS-TQ--GVHLWDLRDRILLR 508 (604)
Q Consensus 451 ~----dg~I~i~d~~~~~----~~---~~--~~~~~~i-----~~~~~s~~~~~l~-~~~~-dg--~I~lwd~~~~~~~~ 508 (604)
. +..|.+||+.+++ +. .. ..+...+ ....|+|||+.++ ..+. +| .|++||+.++....
T Consensus 279 ~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 279 RRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp ESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred CCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 3 2379999998876 22 11 1233333 3788999999877 5553 33 58899988766544
Q ss_pred EeeccccceEEEEeeeCCCCCcEE-EEEeC----CC--cEEEEeCCCCcceEEeeC----CCCCeeEEEEcCCCCcEEEE
Q psy10566 509 KFQGVTQGQFTIHSCFGGANQDFV-ASGSE----DG--KVYIWHVKRELPIATLSG----HTRTVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 509 ~~~~~~~~~~~i~~~~~~~~~~~l-~sgs~----dg--~I~iwd~~~~~~~~~l~~----h~~~V~~v~~sp~~~~~l~s 577 (604)
...+ ...+..+ .. ++++.| ++++. .+ .|+..++..+.....+.. ....+..+.|+|++..++++
T Consensus 359 lT~g-~~~v~~~--~~--~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~ 433 (740)
T 4a5s_A 359 ITKG-TWEVIGI--EA--LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR 433 (740)
T ss_dssp SCCS-SSCEEEE--EE--ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred cccC-CEEEEEE--EE--EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence 3333 3223232 22 234444 44444 23 455555555443334442 24578899999995445555
Q ss_pred EeCC--CcEEEECCCCC
Q psy10566 578 VSDD--CTVRIWGPHLN 592 (604)
Q Consensus 578 ~s~D--g~I~iW~~~~~ 592 (604)
.+.. ..+.+++..++
T Consensus 434 ~s~~~~p~~~l~~~~~~ 450 (740)
T 4a5s_A 434 CSGPGLPLYTLHSSVND 450 (740)
T ss_dssp ECSBSSCEEEEEETTTT
T ss_pred eCCCCCCEEEEEECCCC
Confidence 5443 35777777654
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-15 Score=156.64 Aligned_cols=255 Identities=12% Similarity=0.065 Sum_probs=172.6
Q ss_pred eeEeeEEeccCCCCeeE-----EEECCCCCeEEEEeC-CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10566 336 TCQHRKTLEGHTLGVAY-----LAWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~-----l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 409 (604)
+......+..|...... .+|+|||++|+.++. ++...|++||+.+++...... .+...+..++|+|||+.|+.
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-GRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC-SSCBCSSSCEECTTSSEEEE
T ss_pred CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee-CCCCCccceEEcCCCCEEEE
Confidence 34456677777665555 889999999999887 554469999999988765543 44445556789999999999
Q ss_pred EecCCeEEEEEcCC-Ceeeeeec--eeEE--EEEEcCCCCEEEEEe----------------------CCCeEEEEEcCC
Q psy10566 410 GGIRGQFYQCDIEG-QVLDSWEG--VRVN--CLWCRSDGKSVLAAD----------------------THHRIRTYNFEH 462 (604)
Q Consensus 410 ~~~dg~i~iwd~~~-~~~~~~~~--~~v~--~l~~s~~g~~l~~~~----------------------~dg~I~i~d~~~ 462 (604)
++.++.|++||+.+ +....+.. ..+. ...++++++.++... .+..|.+||+.+
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 99999999999964 33333322 2232 234589999887432 346799999998
Q ss_pred CcccccccCCCCeeEEEECC-CCCEEEEEecC------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 463 LTDSNLLQEDHPVMSFTIDA-TDRLALLNVST------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 463 ~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
++...+..+...+..+.|+| +++.++....+ ..|.++|...+.. ..+..+... ..+....++|+|+.|+..
T Consensus 178 g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~-~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 178 GESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEG-ESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp CCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTT-EEEEEEEECTTSSCEEEE
T ss_pred CceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCC-cccccceECCCCCEEEEE
Confidence 87777777777899999999 99998887763 3688888776543 333333221 123345578999977654
Q ss_pred eC-CC----cEEEEeCCCCcce--EEeeCCCC---CeeEEEEcCCCCcEEEEE--------eCCCcEEEECCCCCC
Q psy10566 536 SE-DG----KVYIWHVKRELPI--ATLSGHTR---TVSCVAWNPVYHQMIASV--------SDDCTVRIWGPHLNT 593 (604)
Q Consensus 536 s~-dg----~I~iwd~~~~~~~--~~l~~h~~---~V~~v~~sp~~~~~l~s~--------s~Dg~I~iW~~~~~~ 593 (604)
+. ++ .|++||+.+++.. ..+.++.. ....++|+|++..++++. ..+..|++|++.++.
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 43 22 3999999988743 33333111 012237999944333332 456789999998764
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-13 Score=133.18 Aligned_cols=281 Identities=10% Similarity=0.031 Sum_probs=193.4
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
+..+...+.+++++++|.++++...++.|.+||.. . ... ......+...+.+++++++|..+++...++ .|..|
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~--~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~--~i~~~ 83 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G--KIT-EYPLPTPDAKVMCLTISSDGEVWFTENAAN--KIGRI 83 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C--CEE-EEECSSTTCCEEEEEECTTSCEEEEETTTT--EEEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C--CeE-EecCCcccCceeeEEECCCCCEEEeCCCCC--eEEEE
Confidence 44566789999999999977776667899999976 2 211 122233456799999999998777766566 79999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
|.. +.............+.++++.+++..+++...++.|..||.+++...... ...+..+++.++|+..++...++
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNN 162 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCC
Confidence 986 43322221123456899999999988888777889999999665443221 23688999999998777777788
Q ss_pred eEEEEEcCCCccccc-c-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 454 RIRTYNFEHLTDSNL-L-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~-~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
.|..||. +++.... . .....+..+++++++...++...++.|.+||. ++... .+..... ...+..+..+++|++
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~-~~~~~~i~~~~~g~l 238 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTP-NARPHAITAGAGIDL 238 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSST-TCCEEEEEECSTTCE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCC-CCCceeEEECCCCCE
Confidence 9999998 5443322 1 23456789999999997777667889999999 66543 2322111 112334455688887
Q ss_pred EEEEeCCCcEEEEeCCCCcceEE-eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 532 VASGSEDGKVYIWHVKRELPIAT-LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.++...++.|.+||. +++.... +..+...+.++++ ++ +.++++.+ .+.|..++++++
T Consensus 239 ~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~-g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 239 WFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DG-ETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CS-SCEEEEET-TTEEEEEEEC--
T ss_pred EEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cC-CCEEEEec-CCcEEEEEcCcc
Confidence 776667889999998 4543222 3345567999999 77 67766655 566777776654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-14 Score=161.70 Aligned_cols=244 Identities=9% Similarity=0.012 Sum_probs=172.8
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCc---eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe-------
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDC---HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ------- 415 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~------- 415 (604)
|...+..++|||||++|+.+..++. ..|++||+.+++........ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 4456889999999999988765431 27999999999876543211 23678999999999999988765
Q ss_pred ---------EEEEEcCCCe---eeeeec--e--eEEEEEEcCCCCEEEEEeC-----CCeEEEEEcCC------C--ccc
Q psy10566 416 ---------FYQCDIEGQV---LDSWEG--V--RVNCLWCRSDGKSVLAADT-----HHRIRTYNFEH------L--TDS 466 (604)
Q Consensus 416 ---------i~iwd~~~~~---~~~~~~--~--~v~~l~~s~~g~~l~~~~~-----dg~I~i~d~~~------~--~~~ 466 (604)
|++|++.+.. ...+.. + .+..+.++|||++++.++. +..|++||+.+ + ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 9999995322 122222 2 3678999999999888765 56899999976 4 233
Q ss_pred ccccCCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCc--eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 467 NLLQEDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRI--LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 467 ~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
.+..+...+.. .++++|+.++..+.. +.|.+||+.++. ....+..+.... .+..+.+++++.+++++..|+.
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD-VLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-EEEEEEEETTTEEEEEEEETTE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC-eEEEEEEEcCCEEEEEEEECCE
Confidence 33344444443 588899888877653 359999998764 234454443321 2333333467788889888884
Q ss_pred --EEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC---CCcEEEECCCCCC
Q psy10566 541 --VYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD---DCTVRIWGPHLNT 593 (604)
Q Consensus 541 --I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~---Dg~I~iW~~~~~~ 593 (604)
|++||+.+|+.+..+..+.+.|..++++|++..++++.+. .++|..||+.+++
T Consensus 359 ~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 359 NTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6677887888888888888889999999984455555443 4789999998765
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=9.1e-15 Score=162.38 Aligned_cols=243 Identities=16% Similarity=0.178 Sum_probs=167.7
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCC-----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDT-----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC--- 370 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg-----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~--- 370 (604)
+|...+..++|||||++||.++.++ .|++||+. ++..... .+. + ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~--tg~~~~~-~~~-~-~~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD--GAKELPD-VLE-R-VKFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT--TTEEEEE-EEE-E-ECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC--CCCCCcc-ccc-C-cccceEEEEeCCCEEEEEEECCcccc
Confidence 4556789999999999999776543 89999998 3322211 222 1 23678999999999999887752
Q ss_pred -----------eEEEEEECCCceE--EEEec-CCCCCCeEEEEEecCCCEEEEEec-----CCeEEEEEcCC-------C
Q psy10566 371 -----------HELWVWNIETELL--RVKLN-HSPEDSLTSCSWNRDGTKFVCGGI-----RGQFYQCDIEG-------Q 424 (604)
Q Consensus 371 -----------~~i~vwd~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~-------~ 424 (604)
..|++|++.++.. ...+. ..+...+..+.|+|||++|+.++. +..|++||+++ .
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 1499999988752 12222 223455789999999999988775 56899999963 2
Q ss_pred -eeeeeece--eEEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCcc---cccccCCC--CeeEEEECCCCCEEEEEec
Q psy10566 425 -VLDSWEGV--RVNCLWCRSDGKSVLAADTH----HRIRTYNFEHLTD---SNLLQEDH--PVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 425 -~~~~~~~~--~v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~~~---~~~~~~~~--~i~~~~~s~~~~~l~~~~~ 492 (604)
....+..+ .+.. .++++|+.++..+.. +.|.+||+.+... ..++.+.. .+..+++++++.++++...
T Consensus 277 ~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 277 LKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp CCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred cceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 34444332 2222 578899888777653 3699999987642 33444433 5778899877788888888
Q ss_pred CCe--EEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE-e---CCCcEEEEeCCCCc
Q psy10566 493 TQG--VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG-S---EDGKVYIWHVKREL 550 (604)
Q Consensus 493 dg~--I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg-s---~dg~I~iwd~~~~~ 550 (604)
++. |++||+.+++.+..+..+.. .+..+.++++++.++.. + ..++|+.||+.+++
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~~~~~---~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFPLEVG---SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEECCCSS---EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCCCEEEecCCCCc---eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 885 66778777877777766533 33444556787655533 3 24789999999877
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-14 Score=138.75 Aligned_cols=245 Identities=11% Similarity=0.020 Sum_probs=185.4
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~ 390 (604)
.+++|++++.|+.|.+||.+ +++.+..+..+. ..+.++.++|+|+.++ +.++ .|..||. +++.+..+...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~----tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~--~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD----TKEIVWEYPLEKGWECNSVAATKAGEILF--SYSK--GAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT----TTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBS--EEEEECT-TSCEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECC----CCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCC--CEEEECC-CCCEEEEEcCC
Confidence 46789999999999999987 555667777665 4789999999999888 3344 6999999 88888888754
Q ss_pred CCCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCeeeeeec------e--eEEEEEEcCCCCEEEEEeCCCeEEEEEcC
Q psy10566 391 PEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIEGQVLDSWEG------V--RVNCLWCRSDGKSVLAADTHHRIRTYNFE 461 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~------~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~ 461 (604)
....+.++.+.++|+.+++.+. ++.+..+|.+|+.+..+.. . ....+.+.++|+++++...++.|..||..
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 3456889999999999999887 8889889999988777641 1 34456788999999999999999999998
Q ss_pred CCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc---eEEEEeeeCCCCCcEEEEEeCC
Q psy10566 462 HLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG---QFTIHSCFGGANQDFVASGSED 538 (604)
Q Consensus 462 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~sgs~d 538 (604)
++....+.....+.++...++++.++++..++.|..+|..+++.+.++...... ...+..+...++|+++++.+..
T Consensus 155 -G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 155 -GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp -SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred -CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 766666665566778888999999999988889999999999999888743211 1123334445788888776421
Q ss_pred --------CcEEEEeC-CCCcceEEeeCCC--CCeeEEE
Q psy10566 539 --------GKVYIWHV-KRELPIATLSGHT--RTVSCVA 566 (604)
Q Consensus 539 --------g~I~iwd~-~~~~~~~~l~~h~--~~V~~v~ 566 (604)
+..+++.+ .+|+.+.++..+. +.|.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTIC 272 (276)
T ss_dssp TCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEE
T ss_pred ccccccccCCceEEEECCCCCEEEEecCcccccceeeee
Confidence 23345555 4677777776543 4555553
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.66 E-value=6.8e-15 Score=162.14 Aligned_cols=241 Identities=7% Similarity=-0.040 Sum_probs=169.6
Q ss_pred EeccCCCCeeEEEECCCCCeEEEE--eCCCceEEEEEECCCceEEEEecCCCCCCeE---------EEEEe--cCCCE-E
Q psy10566 342 TLEGHTLGVAYLAWSPDSSHLLVV--GPEDCHELWVWNIETELLRVKLNHSPEDSLT---------SCSWN--RDGTK-F 407 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~~~l~s~--~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l 407 (604)
.+.+|...+..++|+++.-+++.. +.++ ...+|....+.....+. .+...+. ...|+ |||+. |
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAG--RATLVRRRADGAEESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTT--EEEEEEECTTSCEEESS-CTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCC--cEEEEEECCCCCcceeC-CCCccccccccccCCccceeeeecCCCeEE
Confidence 456788899999999886666665 3355 67778754444444444 2334444 55566 99998 7
Q ss_pred EEEec-CCeEEEEEcC--C-Ceeeeeec-------eeEEEEEEcCCCCEEEEEeCC----------CeEEEEEcCC----
Q psy10566 408 VCGGI-RGQFYQCDIE--G-QVLDSWEG-------VRVNCLWCRSDGKSVLAADTH----------HRIRTYNFEH---- 462 (604)
Q Consensus 408 ~s~~~-dg~i~iwd~~--~-~~~~~~~~-------~~v~~l~~s~~g~~l~~~~~d----------g~I~i~d~~~---- 462 (604)
+.++. +..|+++++. + .....+.. ..+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 76654 5678888877 3 44444433 468899999999999998876 5899999988
Q ss_pred --Ccccccc-cCCCCeeEEEECCCCCEEEEEecC--------CeEEEEecC-CC---ceeeEeeccccceEEEEeeeCCC
Q psy10566 463 --LTDSNLL-QEDHPVMSFTIDATDRLALLNVST--------QGVHLWDLR-DR---ILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 463 --~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d--------g~I~lwd~~-~~---~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+....+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +......++... +....++|
T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~---~~~~~~sp 251 (662)
T 3azo_A 175 DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA---IAQAEWAP 251 (662)
T ss_dssp CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC---EEEEEECT
T ss_pred cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce---EcceEECC
Confidence 5555555 556678889999999999988755 379999998 56 333333333343 33455679
Q ss_pred CCcEEEEEeCCC--cEEEEeCCCCcceEEeeCCCCC--------eeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 528 NQDFVASGSEDG--KVYIWHVKRELPIATLSGHTRT--------VSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 528 ~~~~l~sgs~dg--~I~iwd~~~~~~~~~l~~h~~~--------V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+|+++++++.+| .|++||..+++.......+... +..++|+|+ +.++++++. +.++||.++
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLAN-GLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTT-SCEEEEEBS-SSCEEEEEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCC-CEEEEEEEc-CccEEEEEE
Confidence 999888888888 6777777677654444433322 567899998 789999998 999999443
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.6e-15 Score=163.59 Aligned_cols=277 Identities=10% Similarity=-0.031 Sum_probs=180.1
Q ss_pred CCCCeEEEEECCC---eEEEEEeCCCCceeEeeEEe----ccCCCCeeEEEECCCCCeEEEEeCCC---ceEEEEEECCC
Q psy10566 311 PDGLKLATGSKDT---TVIIWDVDPVTFTCQHRKTL----EGHTLGVAYLAWSPDSSHLLVVGPED---CHELWVWNIET 380 (604)
Q Consensus 311 pdg~~lasgs~dg---~i~iwd~~~~~~~~~~~~~l----~~h~~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~~~ 380 (604)
|+|++++....++ .-.||-.+...+....+... .+|...+.+++|||||++|+.+...+ ...|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6777776665443 34556544222222222221 24556789999999999998554321 13899999999
Q ss_pred ceEE-EEecCCCCCCeEEEEEecCCCEEEEEecCCe-------------EEEEEcCC-C----eeeeeece--eEEEEEE
Q psy10566 381 ELLR-VKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ-------------FYQCDIEG-Q----VLDSWEGV--RVNCLWC 439 (604)
Q Consensus 381 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-------------i~iwd~~~-~----~~~~~~~~--~v~~l~~ 439 (604)
++.. .... .......++|+|||+.|+.++.|.. |++|++.+ . .+.....+ .+..+.+
T Consensus 157 g~~~~~~~~--~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 157 GEWSKVDVI--EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp CCBCSSCCB--SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCcCCccc--CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 8864 1111 1111268899999999999988776 99999953 2 23222222 5788999
Q ss_pred cCCCCEEEEEeCCC----eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec----CCeEEEEecCCCce--eeE
Q psy10566 440 RSDGKSVLAADTHH----RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS----TQGVHLWDLRDRIL--LRK 509 (604)
Q Consensus 440 s~~g~~l~~~~~dg----~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~I~lwd~~~~~~--~~~ 509 (604)
+|||++++.++.++ .|++++..+.....+..+...+....+ +++. +++.+. ++.|.+||+.++.. ...
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 99999998887666 677777655555555555555566666 5666 555443 57899999987653 233
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEeC---CCcE
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK-RELPIATLSGH-TRTVSCVAWNPVYHQMIASVSD---DCTV 584 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~---Dg~I 584 (604)
+..+.... .+..+.++ ++.++++...|+..+||.+. +++....+..+ .+.|..++++|++..++++.+. .++|
T Consensus 313 l~~~~~~~-~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v 390 (695)
T 2bkl_A 313 IVPEDSSA-SLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQI 390 (695)
T ss_dssp EECCCSSC-EEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEE
T ss_pred EecCCCCC-eEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 43332111 22323333 67889999999988888665 46666677665 6778889999984444444443 4789
Q ss_pred EEECCCCCC
Q psy10566 585 RIWGPHLNT 593 (604)
Q Consensus 585 ~iW~~~~~~ 593 (604)
++||+.+++
T Consensus 391 ~~~d~~~g~ 399 (695)
T 2bkl_A 391 YKTSVSTGK 399 (695)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 999998765
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.5e-14 Score=136.98 Aligned_cols=245 Identities=11% Similarity=0.038 Sum_probs=172.9
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+..+..+.....+++|+|+|+ +++++..++.|..|+.. .. ...+..+...+.+++++|+|+.+++...++
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~----~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~- 90 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD----GQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLR- 90 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT----SC--EEEEESSCSSEEEEEECTTCCEEEEETTTT-
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC----CC--eEEEECCCCCcceeeECCCCcEEEEecCCC-
Confidence 34455666777889999999998 78888889999999987 22 344555777899999999999777666555
Q ss_pred eEEEEEECCCceEEEEecC---CCCCCeEEEEEecCCCEEEEE----e-------------cCCeEEEEEcCCCeeeeee
Q psy10566 371 HELWVWNIETELLRVKLNH---SPEDSLTSCSWNRDGTKFVCG----G-------------IRGQFYQCDIEGQVLDSWE 430 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~----~-------------~dg~i~iwd~~~~~~~~~~ 430 (604)
.|.+||..+++....... .....+..++++|+|+.+++. + ..+.|..++..++......
T Consensus 91 -~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 169 (296)
T 3e5z_A 91 -RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIR 169 (296)
T ss_dssp -EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEEC
T ss_pred -eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeec
Confidence 799999988875443321 112346789999999988873 3 1346666776654433322
Q ss_pred c-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCcc---cccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 431 G-VRVNCLWCRSDGKSVLAADTHHRIRTYNFE-HLTD---SNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 431 ~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~-~~~~---~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
. .....++++|+++.+++.+.++.|.+||+. .+.. ...+ .....+..++++++|++.++. ++.|.+||.. +
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g 246 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G 246 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C
Confidence 2 257889999999999777778999999986 3322 1122 134456789999999866555 8899999986 6
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
+.+..+..+.. ...+ ++.+++++.|++++.++ +.-++.++.++
T Consensus 247 ~~~~~~~~~~~-~~~~--~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 247 DELGRVLTPQT-TSNL--CFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp CEEEEEECSSC-CCEE--EEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred CEEEEEECCCC-ceeE--EEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 77777765554 3332 33368888888888764 55666666543
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.5e-15 Score=154.22 Aligned_cols=249 Identities=10% Similarity=-0.045 Sum_probs=167.0
Q ss_pred EeeEEeccCCCC-----eeEEEECCCCCeEEEEeCC-CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe
Q psy10566 338 QHRKTLEGHTLG-----VAYLAWSPDSSHLLVVGPE-DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411 (604)
Q Consensus 338 ~~~~~l~~h~~~-----V~~l~~spd~~~l~s~~~d-~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 411 (604)
.....+..+... +..++|+|||++|+.+... +...|++||+.+++...... ........+.|+|||+.|+.++
T Consensus 21 ~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~ 99 (396)
T 3c5m_A 21 VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-GKGDNTFGGFISTDERAFFYVK 99 (396)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-SSCBCTTTCEECTTSSEEEEEE
T ss_pred cceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-CCCCccccceECCCCCEEEEEE
Confidence 334555544333 7788999999998877654 33479999999887654433 2222233478999999999999
Q ss_pred cCCeEEEEEcCCCe-eeeeece--eEEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEEcCCCc
Q psy10566 412 IRGQFYQCDIEGQV-LDSWEGV--RVNC-------------------LWCRSDGKSVLAA-----DTHHRIRTYNFEHLT 464 (604)
Q Consensus 412 ~dg~i~iwd~~~~~-~~~~~~~--~v~~-------------------l~~s~~g~~l~~~-----~~dg~I~i~d~~~~~ 464 (604)
.++.|++||+.+.. ....... .... ..++|+++.++.. ..+..|.+||+.+++
T Consensus 100 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 100 NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 99999999996433 2222211 1111 2456777766554 356689999998877
Q ss_pred ccccccCCCCeeEEEECC-CCCEEEEEecC------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 465 DSNLLQEDHPVMSFTIDA-TDRLALLNVST------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
...+..+...+..+.|+| +++.++..+.+ ..|.+||+..++... +..+. ....+....++|+|++|+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~-~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 180 LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHA-EGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCC-TTEEEEEEEECTTSSCEEEEEE
T ss_pred EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccC-CCccccceEECCCCCEEEEEec
Confidence 666666677889999999 78877766543 358899987654332 22221 1224445667899998777765
Q ss_pred C-----CcEEEEeCCCCcceEEeeCCCCCeeEEEEcC-CCCcEEEEEe----------------CCCcEEEECCCCCC
Q psy10566 538 D-----GKVYIWHVKRELPIATLSGHTRTVSCVAWNP-VYHQMIASVS----------------DDCTVRIWGPHLNT 593 (604)
Q Consensus 538 d-----g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~l~s~s----------------~Dg~I~iW~~~~~~ 593 (604)
+ +.|++||+.+++........ . .. +.|+| + +.++++++ .++.|++||+.++.
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~~-~~~s~~d-g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 258 FKGQTDRVIYKANPETLENEEVMVMP-P-CS-HLMSNFD-GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp ETTTCCEEEEEECTTTCCEEEEEECC-S-EE-EEEECSS-SSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred CCCCccceEEEEECCCCCeEEeeeCC-C-CC-CCccCCC-CceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 4 44999999988754433221 2 33 89999 8 66777654 34789999998765
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-14 Score=161.40 Aligned_cols=248 Identities=15% Similarity=0.097 Sum_probs=162.8
Q ss_pred cCCCcEEEEEEcCCCCeEE-----EEECCCeEEEEEeCCCCceeEeeEEeccCCCCe--eEEEECCCCCeEEEEeCCCc-
Q psy10566 299 DHCDEVWFCKFSPDGLKLA-----TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV--AYLAWSPDSSHLLVVGPEDC- 370 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~la-----sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V--~~l~~spd~~~l~s~~~d~~- 370 (604)
+|...+.+++|||||++|| .|+.+.+|++||+..+ +... ..+...+ ..++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg----~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG----EWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC----CBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC----CCcC--CcccCcccccceEEecCCCEEEEEEecCCC
Confidence 5667899999999999998 4444578999999832 2110 1122223 68999999999999988651
Q ss_pred ----------eEEEEEECCCceE--EEEec-CCCCCCeEEEEEecCCCEEEEEecCC----eEEEEEcCCCeeeeeece-
Q psy10566 371 ----------HELWVWNIETELL--RVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRG----QFYQCDIEGQVLDSWEGV- 432 (604)
Q Consensus 371 ----------~~i~vwd~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~- 432 (604)
..|++|++.++.. ...+. ..+...+.++.|+|||++++.++.++ .|++|+..+.....+...
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 271 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV 271 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC
Confidence 2499999988762 22222 23445788999999999998887766 677777643333333322
Q ss_pred -eEEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCcc---cccccC--CCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 433 -RVNCLWCRSDGKSVLAADT----HHRIRTYNFEHLTD---SNLLQE--DHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 433 -~v~~l~~s~~g~~l~~~~~----dg~I~i~d~~~~~~---~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
.+....+ ++|. ++..+. ++.|.+||+.+... ..++.+ ...+..++++ ++.++++...++..++|.+.
T Consensus 272 ~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 272 GAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp SCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 3344444 5666 554443 57899999987653 334433 3457788888 67788888889988877654
Q ss_pred -CCceeeEeeccccceEEEEeeeCCCCCcEEEEEe----CCCcEEEEeCCCCcceEEeeCC
Q psy10566 503 -DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS----EDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 503 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs----~dg~I~iwd~~~~~~~~~l~~h 558 (604)
+++..+.+..+... .+..+.++++++.++... ..++|++||+.+++. ..+..+
T Consensus 349 ~~g~~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~~~ 406 (695)
T 2bkl_A 349 LKGKPVRTVQLPGVG--AASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWAKV 406 (695)
T ss_dssp TTCCEEEECCCSSSS--EECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEEEC
T ss_pred CCCCeeEEecCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEecC
Confidence 35555555433221 344455668887666332 347899999998773 344433
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.9e-14 Score=136.83 Aligned_cols=238 Identities=11% Similarity=0.056 Sum_probs=166.1
Q ss_pred EEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
..+..+.....+++|+|+++ .++++..++ .|+.||..++ ...+. .+...+.+++++++|+.+++...++.|.+|
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~--~i~~~~~~~~--~~~~~-~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQN--RTWAWSDDGQ--LSPEM-HPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGT--EEEEEETTSC--EEEEE-SSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCC--EEEEEECCCC--eEEEE-CCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 34444566788999999998 566666666 8999999988 33333 345678999999999988877778999999
Q ss_pred Ec-CCCeeeeee---c---eeEEEEEEcCCCCEEEEE----e-------------CCCeEEEEEcCCCcccccccCCCCe
Q psy10566 420 DI-EGQVLDSWE---G---VRVNCLWCRSDGKSVLAA----D-------------THHRIRTYNFEHLTDSNLLQEDHPV 475 (604)
Q Consensus 420 d~-~~~~~~~~~---~---~~v~~l~~s~~g~~l~~~----~-------------~dg~I~i~d~~~~~~~~~~~~~~~i 475 (604)
|. +++...... + ..+..++++|+|+.+++. + ..+.|..++.. +............
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 99 565433221 1 145679999999987763 2 13466666655 4433344455667
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecC-CCce---eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLR-DRIL---LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~-~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
..++|+|+++.+++.+.++.|++||+. ++.. ...+..+.. ....+.++++|++.++. ++.|.+||.. ++.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~---~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG---KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS---CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC---CCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 899999999998777778999999997 4544 233311111 12234456889866666 8899999986 788
Q ss_pred eEEeeCCCCCeeEEEE-cCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 552 IATLSGHTRTVSCVAW-NPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 552 ~~~l~~h~~~V~~v~~-sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+..+..+.. +++++| .|+ +..|+.++.++ +.-+++.+..
T Consensus 249 ~~~~~~~~~-~~~~~f~~~d-~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 249 LGRVLTPQT-TSNLCFGGPE-GRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp EEEEECSSC-CCEEEEESTT-SCEEEEEETTE-EEEEECSCCB
T ss_pred EEEEECCCC-ceeEEEECCC-CCEEEEEcCCe-EEEEEccccc
Confidence 888888877 999999 577 66777777664 4344554443
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.6e-14 Score=139.54 Aligned_cols=257 Identities=12% Similarity=0.046 Sum_probs=179.1
Q ss_pred CCCeEEEEEeCCCCceeEeeEEec------cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCC
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLE------GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDS 394 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~------~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~ 394 (604)
.+++|.+||.+ +.+....+. ........+++. +++.+++...++ .|.+||..+++.+..+. ....
T Consensus 15 ~~~~l~~~d~~----t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~--~v~viD~~t~~~~~~i~--~~~~ 85 (328)
T 3dsm_A 15 SNATLSYYDPA----TCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSH--VIFAIDINTFKEVGRIT--GFTS 85 (328)
T ss_dssp CCBEEEEEETT----TTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGT--EEEEEETTTCCEEEEEE--CCSS
T ss_pred CCceEEEEECC----CCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCC--EEEEEECcccEEEEEcC--CCCC
Confidence 37899999987 333322221 112345677774 344444444455 89999999999888775 3356
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeee-ce------eEEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCc
Q psy10566 395 LTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWE-GV------RVNCLWCRSDGKSVLAAD--THHRIRTYNFEHLT 464 (604)
Q Consensus 395 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~-~~------~v~~l~~s~~g~~l~~~~--~dg~I~i~d~~~~~ 464 (604)
...++++++++.+++...++.|.+||... +....+. +. ....+++ ++..+++++ .++.|.++|..+.+
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTE
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCe
Confidence 89999999985444444899999999954 4444443 22 4556666 455555555 48899999999887
Q ss_pred ccccccCCCCeeEEEECCCCCEEEEEecC----------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEE
Q psy10566 465 DSNLLQEDHPVMSFTIDATDRLALLNVST----------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 534 (604)
....+........++++|+|++++++..+ +.|.+||..+++....+...... ....+.++|+++.+++
T Consensus 164 ~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~--~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 164 VVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD--WPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC--CCEEEEECTTSCEEEE
T ss_pred EEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC--CceeEEEecCCCEEEE
Confidence 66665555566789999999977766554 78999999999887766532211 1223455688888888
Q ss_pred EeCCCcEEEEeCCCCcceEE--eeCCCCCeeEEEEcCCCCcEEEEE----eCCCcEEEECCCCCC
Q psy10566 535 GSEDGKVYIWHVKRELPIAT--LSGHTRTVSCVAWNPVYHQMIASV----SDDCTVRIWGPHLNT 593 (604)
Q Consensus 535 gs~dg~I~iwd~~~~~~~~~--l~~h~~~V~~v~~sp~~~~~l~s~----s~Dg~I~iW~~~~~~ 593 (604)
+.. .|++||..+++.... +..+.....+++++|+++.++++. ..++.|.+|+.+ ++
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 755 899999998876421 222246789999999657888887 778999999998 54
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.63 E-value=9.5e-14 Score=139.84 Aligned_cols=234 Identities=20% Similarity=0.270 Sum_probs=153.8
Q ss_pred CcEEEEEEcCCCCeEEEEECC---Ce--EEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--------
Q psy10566 302 DEVWFCKFSPDGLKLATGSKD---TT--VIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-------- 368 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~d---g~--i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-------- 368 (604)
..+.+++|||||++||.++.+ +. |.+|++. ++... .... +.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~--~g~~~--~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLE--TLSSK--KILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFI 132 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT--TTEEE--EEEE-ESE-EEEEEECTTSSEEEEEEECCCC-----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECC--CCceE--EEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcE
Confidence 568889999999999988754 34 6666766 33322 2222 233 9999999999999988743
Q ss_pred -----------------CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---------eEEEEEcC
Q psy10566 369 -----------------DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---------QFYQCDIE 422 (604)
Q Consensus 369 -----------------~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------~i~iwd~~ 422 (604)
....|++||+.+++....+.. . .+..++|+|+| .++++..++ .|.++| .
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~ 207 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-D 207 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-T
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-C
Confidence 124799999999887344432 2 68899999999 777775542 455556 4
Q ss_pred CCeeeeeeceeEEEEEEcCCCCEEEEEeCC--------CeEEEEEcCCCccccccc-CCCCeeE-EEECCCCCEEEEEec
Q psy10566 423 GQVLDSWEGVRVNCLWCRSDGKSVLAADTH--------HRIRTYNFEHLTDSNLLQ-EDHPVMS-FTIDATDRLALLNVS 492 (604)
Q Consensus 423 ~~~~~~~~~~~v~~l~~s~~g~~l~~~~~d--------g~I~i~d~~~~~~~~~~~-~~~~i~~-~~~s~~~~~l~~~~~ 492 (604)
++ ...+... .....++|+|+.++.++.+ ..|.+|| +++...+.. +...+.. +.|+ ++ ++++++.
T Consensus 208 ~~-~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 208 GK-EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp TE-EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred Cc-eEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEec
Confidence 43 3333222 2222349999998887754 3688888 444333333 3566775 8999 88 8888999
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE-EEEeCCCCcceEEeeCCCCC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV-YIWHVKRELPIATLSGHTRT 561 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I-~iwd~~~~~~~~~l~~h~~~ 561 (604)
++.+++| +.+++... +..+.. .+..+.+++ .++++++.++.. .||.+. ++ ...+..|...
T Consensus 282 ~~~~~l~-~~~g~~~~-~~~~~~---~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 282 EGSVNLY-IWDGEIKP-IAKGRH---WIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp TTEEEEE-EESSSEEE-EECSSS---EEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred CCcEEEE-EcCCceEE-EecCCC---eEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 9999999 87665533 333333 333444556 677777777654 667665 54 5556666543
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.6e-13 Score=143.70 Aligned_cols=270 Identities=11% Similarity=0.070 Sum_probs=192.6
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC--CceEEEEec
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE--TELLRVKLN 388 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~--~~~~~~~~~ 388 (604)
|.+.++++...+++|.++|.. +.+.+..+.. ...+..+.|+|||+++++++.++ .|.+||+. +++.+..+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~----t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg--~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGS----TYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDG--KVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETT----TCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTS--EEEEEETTSSSCCEEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECC----CCeEEEEEeC-CCCccceEECCCCCEEEEEcCCC--eEEEEECCCCCCcEeEEEe
Confidence 444567777789999999988 4455556653 33577999999999999998887 89999995 777777776
Q ss_pred CCCCCCeEEEEEe----cCCCEEEEEecC-CeEEEEEc-CCCeeeeeec-------------eeEEEEEEcCCCCEEE-E
Q psy10566 389 HSPEDSLTSCSWN----RDGTKFVCGGIR-GQFYQCDI-EGQVLDSWEG-------------VRVNCLWCRSDGKSVL-A 448 (604)
Q Consensus 389 ~~~~~~v~~~~~~----~~~~~l~s~~~d-g~i~iwd~-~~~~~~~~~~-------------~~v~~l~~s~~g~~l~-~ 448 (604)
.+ .....++|+ |||+++++++.. +.|.++|. +.+.++.+.. .++..+..++++..++ .
T Consensus 238 ~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 238 IG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp CC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred cC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 43 346899999 699988887664 89999998 4555554431 1577888888866544 4
Q ss_pred EeCCCeEEEEEcCCCccc--ccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec-cccce--EEEEe
Q psy10566 449 ADTHHRIRTYNFEHLTDS--NLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG-VTQGQ--FTIHS 522 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~-~~~~~--~~i~~ 522 (604)
....|.|.++|....... ..+........+.|+|++++++++. .++.|.++|+.+++.+..+.. ..... ....
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~- 394 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN- 394 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-
T ss_pred ecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-
Confidence 455689999998765322 2223345567889999999987766 578999999999988776654 11110 1111
Q ss_pred eeCCCCC-cEEEEEe-CCCcEEEEeCCC-------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC-------CCcEEE
Q psy10566 523 CFGGANQ-DFVASGS-EDGKVYIWHVKR-------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSD-------DCTVRI 586 (604)
Q Consensus 523 ~~~~~~~-~~l~sgs-~dg~I~iwd~~~-------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~-------Dg~I~i 586 (604)
++.|++ .+.+++. .++.|.++|..+ .+.+.++......-..+..+|+ +..+..... ..+|.+
T Consensus 395 -~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~-~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 395 -FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN-SQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp -EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT-CSEEEEECTTCSSHHHHTCEEE
T ss_pred -eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCC-CCeEEEecCCCCCcccCceEEE
Confidence 234664 4444543 468999999987 6778888766444456789999 555555442 358999
Q ss_pred ECCCCC
Q psy10566 587 WGPHLN 592 (604)
Q Consensus 587 W~~~~~ 592 (604)
+|+.+.
T Consensus 473 ~d~~~~ 478 (567)
T 1qks_A 473 FDIKAM 478 (567)
T ss_dssp EEGGGC
T ss_pred EECCcc
Confidence 999876
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=6.3e-13 Score=141.83 Aligned_cols=295 Identities=13% Similarity=0.038 Sum_probs=202.6
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC----CCCCeEEEEe
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS----PDSSHLLVVG 366 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s----pd~~~l~s~~ 366 (604)
.+.+..+.. ...+..+.|||||+++++++.|+.|.+||+.. .+.+.+..+... .....++|+ |||++++++.
T Consensus 187 ~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~--~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 187 YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWM--KEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGA 262 (567)
T ss_dssp CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTS--SSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEE
T ss_pred CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCC--CCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEE
Confidence 344555543 23577999999999999999999999999841 133445555543 346799999 6999999888
Q ss_pred CCCceEEEEEECCCceEEEEecCCC----------CCCeEEEEEecCCCEEEE-EecCCeEEEEEcCCC-e--eeeee-c
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSP----------EDSLTSCSWNRDGTKFVC-GGIRGQFYQCDIEGQ-V--LDSWE-G 431 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~-~--~~~~~-~ 431 (604)
... ++|.++|..+.+.+..+.... ...+..+..++++..++. ...+|.|.++|.... . +..+. +
T Consensus 263 ~~~-~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~ 341 (567)
T 1qks_A 263 YWP-PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE 341 (567)
T ss_dssp EET-TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC
T ss_pred ccC-CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc
Confidence 765 489999999998877665221 225778888887665544 455689999998532 1 11221 2
Q ss_pred eeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccccC----CCCeeEEE-ECCCCCEEEEEe--cCCeEEEEecCC
Q psy10566 432 VRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLLQE----DHPVMSFT-IDATDRLALLNV--STQGVHLWDLRD 503 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~~~----~~~i~~~~-~s~~~~~l~~~~--~dg~I~lwd~~~ 503 (604)
....++.|+|+|++++++. .++.|.++|..+++....+.. .++-.... ++|++..+++.+ .++.|.++|..+
T Consensus 342 ~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 342 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 3466789999999987765 578999999998765443332 11111222 578755555443 468999999987
Q ss_pred -------CceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-------CCcEEEEeCCCC-----c-ceEEee-------
Q psy10566 504 -------RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-------DGKVYIWHVKRE-----L-PIATLS------- 556 (604)
Q Consensus 504 -------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-------dg~I~iwd~~~~-----~-~~~~l~------- 556 (604)
.+.++++.........+ ..+|+++++++... .++|.++|+.+. . ....+.
T Consensus 422 ~~~~~~~~kvv~~i~~~g~g~~~i---~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~ 498 (567)
T 1qks_A 422 EGHPDNAWKILDSFPALGGGSLFI---KTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGI 498 (567)
T ss_dssp TTCTTTBTSEEEEEECSCSCCCCE---ECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTC
T ss_pred CCCccccCEEEEEEecCCCCCEEE---EeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEecccccccc
Confidence 56777776543332222 34699999988763 359999999876 2 123332
Q ss_pred -CCCCCeeEEEEcCCCCcEEEEEe----CCCcEEEECCCCCC
Q psy10566 557 -GHTRTVSCVAWNPVYHQMIASVS----DDCTVRIWGPHLNT 593 (604)
Q Consensus 557 -~h~~~V~~v~~sp~~~~~l~s~s----~Dg~I~iW~~~~~~ 593 (604)
.-...+..+.|+|+|..+++|.. .++.|.|+|.++.+
T Consensus 499 ~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 499 TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 12357899999999666666643 37999999998875
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.8e-13 Score=134.61 Aligned_cols=241 Identities=11% Similarity=0.046 Sum_probs=164.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-- 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-- 368 (604)
......+.++...+.+++|+|+|++++++..++.|.+||.+ ++. .......+...+.+++|+|+|+.+++...+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~--~~~--~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~ 109 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE--TKE--IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFK 109 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTT--TCC--EEEEEECSSSSEEEEEECTTSCEEEEECTTSS
T ss_pred cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCC--CCc--EEEEeeCCCCCcceEEECCCCcEEEEeCCCCC
Confidence 34556677788888999999999988888889999999987 222 222222456789999999999887776655
Q ss_pred --CceEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEec------CCeEEEEEcCCCeeeeeec--eeEEEE
Q psy10566 369 --DCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGI------RGQFYQCDIEGQVLDSWEG--VRVNCL 437 (604)
Q Consensus 369 --~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~--~~v~~l 437 (604)
+ .|.+||..++.....+. ......+.+++++|+|+.+++... .+.|..+|.++..+..+.. ..+..+
T Consensus 110 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i 187 (333)
T 2dg1_A 110 STG--GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGI 187 (333)
T ss_dssp SCC--EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEE
T ss_pred CCc--eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccce
Confidence 4 69999998887553332 223456899999999988776654 3567777776533333322 257889
Q ss_pred EEcCCCCEEEEE-eCCCeEEEEEcCC-Ccccc------c--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 438 WCRSDGKSVLAA-DTHHRIRTYNFEH-LTDSN------L--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 438 ~~s~~g~~l~~~-~~dg~I~i~d~~~-~~~~~------~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
+++|+|+.++++ +.++.|.+||..+ +.... . ......+..++++++|++.++...++.|.+||. +++.+
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~ 266 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPI 266 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEE
Confidence 999999866544 5678999999864 22111 0 111235778999999998887777899999998 46666
Q ss_pred eEeeccccc---eEEEEeeeCCCCCcEEEEEeCC
Q psy10566 508 RKFQGVTQG---QFTIHSCFGGANQDFVASGSED 538 (604)
Q Consensus 508 ~~~~~~~~~---~~~i~~~~~~~~~~~l~sgs~d 538 (604)
..+...... ...+..+.++++++.|+.++.+
T Consensus 267 ~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 267 GQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 666543220 0011223335887777665555
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-13 Score=131.77 Aligned_cols=237 Identities=9% Similarity=-0.046 Sum_probs=167.1
Q ss_pred CeeEEEECCCCCeEEEE-eCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee
Q psy10566 349 GVAYLAWSPDSSHLLVV-GPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~-~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 427 (604)
...+++++++|+.++++ +.++ .|.+||..++.... +.......+.+++++++++.+++.. ++.|..||.++....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~--~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYG--RVVKLATGSTGTTV-LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSC--EEEEECC-----EE-CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCC--cEEEecCCCcccce-EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 67899999999866624 4455 79999987655332 2223334678999999998666655 889999999876555
Q ss_pred eee--c-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 428 SWE--G-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 428 ~~~--~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
.+. + ..+..++++++|+.+++...++.|.+|+..+....... .....+..++++++++.+++...++.|.+||...
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 443 2 36889999999997777777899999976554332221 2234678899999999777777788999999887
Q ss_pred CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 504 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
............. ...+...++|.++++...++.|.+||............+...+.+++++|+ +.++++...++.
T Consensus 181 ~~~~~~~~~~~~~---p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~ 256 (270)
T 1rwi_B 181 NNQVVLPFTDITA---PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD-RTVYVADRGNDR 256 (270)
T ss_dssp CCEEECCCSSCCS---EEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTT-CCEEEEEGGGTE
T ss_pred CceEeecccCCCC---ceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCC-CCEEEEECCCCE
Confidence 6544322222122 233455688887777777899999998765443322234467899999999 689999999999
Q ss_pred EEEECCCCCC
Q psy10566 584 VRIWGPHLNT 593 (604)
Q Consensus 584 I~iW~~~~~~ 593 (604)
|+++++...+
T Consensus 257 v~~~~~~~~~ 266 (270)
T 1rwi_B 257 VVKLTSLEHH 266 (270)
T ss_dssp EEEECCCGGG
T ss_pred EEEEcCCCcc
Confidence 9999997654
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.8e-12 Score=124.19 Aligned_cols=276 Identities=8% Similarity=-0.030 Sum_probs=189.8
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
.....+.+++++++|.+.++...++.|.+||.. . .... ..+..+...+.++++.+++...++...++ .|..||.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~--~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~--~v~~~d~ 90 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G--RIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGAN--KIGKLSK 90 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S--CEEE-EECSSTTCCEEEEEECTTSCEEEEETTTT--EEEEECT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C--ceEE-EECCCCCCcceeEEECCCCCEEEEecCCC--eEEEECC
Confidence 345678999999999987777678999999875 2 2221 23333446789999999998777665555 7999998
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee-ee--ceeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS-WE--GVRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~--~~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
. ++............+.++++.++++.+++...++.|..+|.+++.... .. ...+..+++.++|+..++...++.|
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 8 554332222234568999999999988887778899999998655422 11 2368899999999966666667899
Q ss_pred EEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE-eeccccceEEEEeeeCCCCCcEE
Q psy10566 456 RTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK-FQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 456 ~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
..||. ++...... .....+..+++++++...++....+.|.+||. ++..... ...... .+..+...++|++.
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~---~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNA---RPHAITAGKNSEIW 244 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC---CEEEEEECSTTCEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCC---CceEEEECCCCCEE
Confidence 99998 43332221 22356889999999987777667788999998 4443332 111222 23334556888877
Q ss_pred EEEeCCCcEEEEeCCCCcceE-EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIA-TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~-~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
++...++.|..||. +++... .+......+.++++.++ +.++++.. . .|..++++
T Consensus 245 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 245 FTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKD-GSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTT-SCEEEECS-S-EEEEEEEC
T ss_pred EeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCC-CCEEEEcc-C-ceEEeCCC
Confidence 77666799999998 454332 23334567899999998 66666554 4 66666653
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-13 Score=130.19 Aligned_cols=210 Identities=10% Similarity=-0.027 Sum_probs=162.8
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec---eeE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG---VRV 434 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v 434 (604)
.++.|++++.++ .|.+||.++|+.+.++.......+.++.++|+|+.++ +.++.|..||.+|+.+..+.. ..+
T Consensus 4 ~~~~lv~~~~~~--~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWN--KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRDGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCS--EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCC--EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEEEEcCCCCccc
Confidence 356777877777 8999999999999888743324688999999999888 457889999999998888875 368
Q ss_pred EEEEEcCCCCEEEEEeC-CCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 435 NCLWCRSDGKSVLAADT-HHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
.++.+.++|+.+++.+. ++.|..+|... +....+. .......+++.++|+++++...++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 88999999999999887 77888887643 3222111 11234566789999999999999999999998 999
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC------CCeeEEEEcCCCCcEEEEE
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT------RTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~------~~V~~v~~sp~~~~~l~s~ 578 (604)
+.++...... ..+ ...++|+++++++.+++|..+|..+|+.+.++..+. ..+..+...++ +.++++.
T Consensus 158 ~w~~~~~~~~-~~~---~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~-G~i~v~~ 230 (276)
T 3no2_A 158 LNSVKLSGTP-FSS---AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN-GGLYICN 230 (276)
T ss_dssp EEEEECSSCC-CEE---EECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT-SCEEEEE
T ss_pred EEEEECCCCc-cce---eEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC-CCEEEEe
Confidence 8888764322 222 224789999999989999999999999999886442 23788888888 6777766
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-12 Score=129.95 Aligned_cols=244 Identities=11% Similarity=0.108 Sum_probs=168.9
Q ss_pred CCCCeeEEEECCCCCeEEE-------EeCCCceEEEEEECCCceEEEEec---CCCCCCeEEEEEecC-CCEEEEEecCC
Q psy10566 346 HTLGVAYLAWSPDSSHLLV-------VGPEDCHELWVWNIETELLRVKLN---HSPEDSLTSCSWNRD-GTKFVCGGIRG 414 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s-------~~~d~~~~i~vwd~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~l~s~~~dg 414 (604)
.-....+++|++++..+++ ...++ .|.+||..+++...... .++...+.+++++++ ++.++ ++..+
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~ 92 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAG--EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRL 92 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECC--EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTT
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCC--EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCC
Confidence 3456789999999987776 34555 79999988887643322 013356899999999 65444 44455
Q ss_pred eEEEEEcCCCeeee-ee------ceeEEEEEEcCCCCEEEEEeCC---------------CeEEEEEcCCCcccccccCC
Q psy10566 415 QFYQCDIEGQVLDS-WE------GVRVNCLWCRSDGKSVLAADTH---------------HRIRTYNFEHLTDSNLLQED 472 (604)
Q Consensus 415 ~i~iwd~~~~~~~~-~~------~~~v~~l~~s~~g~~l~~~~~d---------------g~I~i~d~~~~~~~~~~~~~ 472 (604)
.|..||.+++.... .. ...+.+++++++|+.+++...+ +.|..||.. +.........
T Consensus 93 ~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (314)
T 1pjx_A 93 GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF 171 (314)
T ss_dssp EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred CEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence 78999988554322 11 1247899999999887776655 567777765 3333333333
Q ss_pred CCeeEEEEC----CCCCEEEEE-ecCCeEEEEecC-CCce-----eeEeeccc-cceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 473 HPVMSFTID----ATDRLALLN-VSTQGVHLWDLR-DRIL-----LRKFQGVT-QGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 473 ~~i~~~~~s----~~~~~l~~~-~~dg~I~lwd~~-~~~~-----~~~~~~~~-~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
.....++++ ++++.++++ ..++.|.+||+. ++.. ...+..+. . ....+.++++|++.++...++.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~---~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG---GADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC---EEEEEEEBTTCCEEEEEETTTE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC---CCCceEECCCCCEEEEEcCCCE
Confidence 456789999 999766655 467899999986 4432 12222221 1 2233455688998888888999
Q ss_pred EEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc-EEEEEeCCCcEEEECCCCCCCCCc
Q psy10566 541 VYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ-MIASVSDDCTVRIWGPHLNTNKSP 597 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~-~l~s~s~Dg~I~iW~~~~~~~~~~ 597 (604)
|.+||..+++.+..+..+...+.+++|+|+ +. ++++...++.|..|++.......+
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~d-g~~l~v~~~~~~~l~~~~~~~~g~~~~ 305 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFEWQRNGKKQY 305 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEECSSCBCCCG
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCC-CCEEEEEeCCCCeEEEEeCCCCCcccc
Confidence 999999888888888777788999999999 56 666667778999999876543333
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.3e-13 Score=150.48 Aligned_cols=276 Identities=11% Similarity=0.032 Sum_probs=178.4
Q ss_pred CCCCeEEEEECCCe---EEEEEeCCC---CceeEeeEE----eccCCCCeeEEEECCCCCeEEEEeCC-Cc--eEEEEEE
Q psy10566 311 PDGLKLATGSKDTT---VIIWDVDPV---TFTCQHRKT----LEGHTLGVAYLAWSPDSSHLLVVGPE-DC--HELWVWN 377 (604)
Q Consensus 311 pdg~~lasgs~dg~---i~iwd~~~~---~~~~~~~~~----l~~h~~~V~~l~~spd~~~l~s~~~d-~~--~~i~vwd 377 (604)
|+|++++....++. -.+|..+.. .+..+.+.. -.+|...+..++|||||++|+.++.+ |. ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 78887776654433 566766522 122222111 12234468899999999999887654 21 3799999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe--------------EEEEEcCC-C----eeeeeece--eEEE
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ--------------FYQCDIEG-Q----VLDSWEGV--RVNC 436 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--------------i~iwd~~~-~----~~~~~~~~--~v~~ 436 (604)
+.+++...... +...+..++|+|| +.|+.++.++. |++|++.+ . .+.....+ .+..
T Consensus 196 l~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 196 VADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp TTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99998755322 1112357899999 99988887654 88999842 2 22222222 4788
Q ss_pred EEEcCCCCEEEEEeCCC-----eEEEEEcCCC--c-ccccccCCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCC
Q psy10566 437 LWCRSDGKSVLAADTHH-----RIRTYNFEHL--T-DSNLLQEDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDR 504 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg-----~I~i~d~~~~--~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~ 504 (604)
+.++|||++++..+.++ .|++||+.++ . ...+..+....... ++|+++.++..+.+ +.|.+||+.++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 99999999988877544 8999999876 4 44444444444444 34889988887764 45999999875
Q ss_pred c-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEeC-
Q psy10566 505 I-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK-RELPIATLSGH-TRTVSCVAWNPVYHQMIASVSD- 580 (604)
Q Consensus 505 ~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~- 580 (604)
. ....+..+... .+..+.+. ++.++++...|+..+||.+. +++....+..+ .+.|..++++|++..++++.+.
T Consensus 352 ~~~~~~l~~~~~~--~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~ 428 (741)
T 1yr2_A 352 TPRFDTVVPESKD--NLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSF 428 (741)
T ss_dssp SCEEEEEECCCSS--EEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEET
T ss_pred ccccEEEecCCCC--eEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCC
Confidence 2 33333333322 23323332 56788888899987777554 46666667653 6778999999985445555443
Q ss_pred --CCcEEEECCCCCC
Q psy10566 581 --DCTVRIWGPHLNT 593 (604)
Q Consensus 581 --Dg~I~iW~~~~~~ 593 (604)
.++|++||+.+++
T Consensus 429 ~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 429 TQPATVLALDPATAK 443 (741)
T ss_dssp TEEEEEEEEETTTTE
T ss_pred CCCCEEEEEECCCCc
Confidence 4789999998764
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.57 E-value=5.7e-13 Score=128.93 Aligned_cols=238 Identities=8% Similarity=-0.039 Sum_probs=165.1
Q ss_pred cEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 303 EVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 303 ~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
...+++++++|++++ +.+.++.|.+|+.. ..........+...+.+++++++++.+++.. ++ .|.+||..+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~--~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATG----STGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NN--RVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECTTCCEEEEET-TT--EEEEECTTCS
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCC----CcccceEeeCCcCCcceeEECCCCCEEEEcC-CC--EEEEEeCCCc
Confidence 678999999999777 54678899999875 2221111123345688999999998666555 55 7999998776
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee--eec-eeEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS--WEG-VRVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
.... +.......+.+++++++|+.+++...++.|.+|+........ ..+ ..+.+++++++|+.+++...++.|.+|
T Consensus 98 ~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 98 NQTV-LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CCEE-CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred eEee-eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 5432 222233568999999999988877788999999764322211 112 257889999999977777778899999
Q ss_pred EcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 459 NFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 459 d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
|........... ....+..++++++|..+++...++.|.+||............+.. ....+.++++|+++++...
T Consensus 177 ~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 177 EAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN---TPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp CTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCS---CEEEEEECTTCCEEEEEGG
T ss_pred ecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCC---CceeEEECCCCCEEEEECC
Confidence 987755433222 236688999999997777777788999999876543322111112 2333455688998888889
Q ss_pred CCcEEEEeCCCCcc
Q psy10566 538 DGKVYIWHVKRELP 551 (604)
Q Consensus 538 dg~I~iwd~~~~~~ 551 (604)
++.|++|+....+.
T Consensus 254 ~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 254 NDRVVKLTSLEHHH 267 (270)
T ss_dssp GTEEEEECCCGGGS
T ss_pred CCEEEEEcCCCccc
Confidence 99999999876543
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-11 Score=125.10 Aligned_cols=274 Identities=8% Similarity=-0.053 Sum_probs=179.9
Q ss_pred EEcCCCCeEEEEEC--CC---eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC----------CCceE
Q psy10566 308 KFSPDGLKLATGSK--DT---TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP----------EDCHE 372 (604)
Q Consensus 308 ~fspdg~~lasgs~--dg---~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~----------d~~~~ 372 (604)
...|+++++.+... .. +|.+||.. +.+.+..+.....+ .++++|||++++++.. ++ .
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~----t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~--~ 98 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAG----SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTD--Y 98 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECC----CCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCC--e
Confidence 34467776665542 22 88999987 44556666644443 9999999999998863 33 7
Q ss_pred EEEEECCCceEEEEecCC-C-----CCCeEEEEEecCCCEEEEEec--CCeEEEEEcCC-Ceeee-eeceeEEEEEEcCC
Q psy10566 373 LWVWNIETELLRVKLNHS-P-----EDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEG-QVLDS-WEGVRVNCLWCRSD 442 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~-~~~~~-~~~~~v~~l~~s~~ 442 (604)
|.+||..+.+....+... . ......++|+|||+++++++. ++.|.++| .. +.+.. +... .++.+.++
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--~~~~~~~~ 175 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--TCYHIHPG 175 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--ceEEEEeC
Confidence 999999998877766432 0 123458999999999999874 47899999 74 44444 3221 12444555
Q ss_pred C-CEEEEEeCCCeEEEEEcCCCcccccc------cCCCCe-eEEEECCCCCEEEEEecCCeEEEEecCCCc--eeeEeec
Q psy10566 443 G-KSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPV-MSFTIDATDRLALLNVSTQGVHLWDLRDRI--LLRKFQG 512 (604)
Q Consensus 443 g-~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i-~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~--~~~~~~~ 512 (604)
+ ..+++.+.||.+.++|. +++..... ....++ ....+.+++..++..+..+.+.+.|+.+.. .+..+..
T Consensus 176 ~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 176 APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred CCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeee
Confidence 4 45667778899999998 65443211 111221 234556666665555578899999997652 2222221
Q ss_pred ccc-------ceEEEEeeeCCCCCcEEEEEeC----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 513 VTQ-------GQFTIHSCFGGANQDFVASGSE----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 513 ~~~-------~~~~i~~~~~~~~~~~l~sgs~----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
... .......+.++++++.++.+.. .+.|.++|..+++.+.++.. .....+++|+||+..++
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDL 333 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEE
Confidence 100 0011122345688887777643 35799999999999998864 33589999999943267
Q ss_pred EEEe-CCCcEEEECCCCCCC
Q psy10566 576 ASVS-DDCTVRIWGPHLNTN 594 (604)
Q Consensus 576 ~s~s-~Dg~I~iW~~~~~~~ 594 (604)
+++. .++.|.+||+.+++.
T Consensus 334 ~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 334 YALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEEcCCCCeEEEEECCCCCE
Confidence 7776 589999999988763
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.1e-12 Score=127.78 Aligned_cols=249 Identities=11% Similarity=0.069 Sum_probs=170.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
.....+++. +++.+++...++.|.+||.. +.+.+.++. .......++++++++.+++...++ .|.+||..++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~----t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~--~v~~iD~~t~ 115 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDIN----TFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDY--RIFIINPKTY 115 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETT----TCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCS--EEEEEETTTT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECc----ccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCC--eEEEEECCCC
Confidence 456778875 34555666668999999998 445555554 346688999999985444443566 8999999999
Q ss_pred eEEEEecCCCC----CCeEEEEEecCCCEEEEEe--cCCeEEEEEcC-CCeeeeeec-eeEEEEEEcCCCCEEEEEeCC-
Q psy10566 382 LLRVKLNHSPE----DSLTSCSWNRDGTKFVCGG--IRGQFYQCDIE-GQVLDSWEG-VRVNCLWCRSDGKSVLAADTH- 452 (604)
Q Consensus 382 ~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~-~~~~~~~~~-~~v~~l~~s~~g~~l~~~~~d- 452 (604)
+....+..+.. .....+++ ++..++++. .++.|.++|.. ++.+..+.. .....++++++|+.++++..+
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~ 193 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGY 193 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBC
T ss_pred eEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCc
Confidence 88776653321 14556777 344555554 48899999995 555555442 346788999999977666554
Q ss_pred ---------CeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE--eeccccceEE
Q psy10566 453 ---------HRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK--FQGVTQGQFT 519 (604)
Q Consensus 453 ---------g~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~--~~~~~~~~~~ 519 (604)
+.|.++|..+.+....+.. ......++++|+++.++++.. .|.+||..+++.... +......
T Consensus 194 ~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~--- 268 (328)
T 3dsm_A 194 EGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTK--- 268 (328)
T ss_dssp TTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSC---
T ss_pred cCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCc---
Confidence 7899999988765544432 346899999999999988765 899999988875421 1111122
Q ss_pred EEeeeCCC-CCcEEEEE----eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 520 IHSCFGGA-NQDFVASG----SEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 520 i~~~~~~~-~~~~l~sg----s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
...+.++| ++.+.++. ..++.|.+||.. ++.+.++..- .....++|
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~ 319 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCW 319 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEec-cCcceEEE
Confidence 22234456 56666666 678999999998 8888887632 33455665
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.52 E-value=7e-12 Score=125.61 Aligned_cols=274 Identities=14% Similarity=0.072 Sum_probs=179.4
Q ss_pred EEcCCCCeEEEEEC-----CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC--------CCceEEE
Q psy10566 308 KFSPDGLKLATGSK-----DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP--------EDCHELW 374 (604)
Q Consensus 308 ~fspdg~~lasgs~-----dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~--------d~~~~i~ 374 (604)
...|+++.+..... ++.|.+.|.. +.+.+..+.....+ . ++++|||++++++.. +....|.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~----t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGE----AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETT----TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECC----CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 44678887776654 6789999988 55666666654454 4 999999999988762 1113799
Q ss_pred EEECCCceEEEEecCCC------CCCeEEEEEecCCCEEEEEec--CCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCE
Q psy10566 375 VWNIETELLRVKLNHSP------EDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKS 445 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~ 445 (604)
+||..+++....+..+. ......++|+|||++++++.. ++.|.++|+. ++.+..+.-... ...+....+.
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~ 191 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDT 191 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTE
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCce
Confidence 99999999888775322 124667999999999998874 6899999995 555555543211 1223334456
Q ss_pred EEEEeCCCeEEEEEcCC-Ccccc----ccc-CCCCee-EEEE-CCCCCEEEEEecCCeEEEEecCCCc--eeeEee----
Q psy10566 446 VLAADTHHRIRTYNFEH-LTDSN----LLQ-EDHPVM-SFTI-DATDRLALLNVSTQGVHLWDLRDRI--LLRKFQ---- 511 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~-~~~~~----~~~-~~~~i~-~~~~-s~~~~~l~~~~~dg~I~lwd~~~~~--~~~~~~---- 511 (604)
+++.+.||++.+.++.. ++... .+. ...++. ...| .++|++++ .+.+|.|+++|+.+.. ....+.
T Consensus 192 ~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred eEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccc
Confidence 66777777777777765 33211 111 112221 2355 36775555 5568999999997653 333332
Q ss_pred -----cc-ccceEEEEeeeCCCCCcEEEEEeC----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 512 -----GV-TQGQFTIHSCFGGANQDFVASGSE----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 512 -----~~-~~~~~~i~~~~~~~~~~~l~sgs~----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
+. ...... +..+++++.++.... .+.|.++|..+++.+..+..- ..+++++++|++..+|
T Consensus 271 ~~~~~g~~p~g~q~---~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 271 AERADGWRPGGWQQ---VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLL 346 (386)
T ss_dssp HHHHTTEEECSSSC---EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEE
T ss_pred ccccccccCCCcce---eeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEE
Confidence 00 001111 222467777666542 257999999999999988643 3688999999954355
Q ss_pred EE-EeCCCcEEEECCCCCC
Q psy10566 576 AS-VSDDCTVRIWGPHLNT 593 (604)
Q Consensus 576 ~s-~s~Dg~I~iW~~~~~~ 593 (604)
++ ...++.|.++|..+++
T Consensus 347 y~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEETTTTEEEEEETTTCC
T ss_pred EEEcCCCCeEEEEECCCCc
Confidence 44 5669999999999876
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.52 E-value=8.8e-12 Score=123.36 Aligned_cols=242 Identities=10% Similarity=0.089 Sum_probs=163.5
Q ss_pred ccCCCcEEEEEEcCCCCeEEE-------EECCCeEEEEEeCCCCceeEeeEE--eccCCCCeeEEEECCC-CCeEEEEeC
Q psy10566 298 NDHCDEVWFCKFSPDGLKLAT-------GSKDTTVIIWDVDPVTFTCQHRKT--LEGHTLGVAYLAWSPD-SSHLLVVGP 367 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~las-------gs~dg~i~iwd~~~~~~~~~~~~~--l~~h~~~V~~l~~spd-~~~l~s~~~ 367 (604)
.+.-....+++|+++|.++++ +..++.|.+||... +....... ..++...+.+++++++ ++.+++..
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT--GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT--CCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC--CcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 334456789999999998887 67789999999762 22221111 1124467899999999 66555444
Q ss_pred CCceEEEEEECCCceEEEE-ecC---CCCCCeEEEEEecCCCEEEEEecC---------------CeEEEEEcCCCeeee
Q psy10566 368 EDCHELWVWNIETELLRVK-LNH---SPEDSLTSCSWNRDGTKFVCGGIR---------------GQFYQCDIEGQVLDS 428 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~l~s~~~d---------------g~i~iwd~~~~~~~~ 428 (604)
.+ .|.+||.. ++.... ... .....+.+++++++|+.+++...+ +.|..||.+++....
T Consensus 91 ~~--~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (314)
T 1pjx_A 91 RL--GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV 167 (314)
T ss_dssp TT--EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE
T ss_pred CC--CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe
Confidence 43 59999998 765433 221 112358899999999888877665 578888877554433
Q ss_pred eec-eeEEEEEEc----CCCCEEEEE-eCCCeEEEEEcC-CCcc-----ccccc-CC-CCeeEEEECCCCCEEEEEecCC
Q psy10566 429 WEG-VRVNCLWCR----SDGKSVLAA-DTHHRIRTYNFE-HLTD-----SNLLQ-ED-HPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 429 ~~~-~~v~~l~~s----~~g~~l~~~-~~dg~I~i~d~~-~~~~-----~~~~~-~~-~~i~~~~~s~~~~~l~~~~~dg 494 (604)
... .....++++ ++++.++++ ..++.|.+||.. .+.. ...+. +. ..+..++++++|.+.++...++
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 222 246788999 999766555 467899999976 2221 11111 11 4578899999999888887889
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEE-EEeCCCcEEEEeCCC
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGSEDGKVYIWHVKR 548 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs~dg~I~iwd~~~ 548 (604)
.|.+||..+++.+..+..+.... ..+.++++++.|+ +...++.|..|+...
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~---~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKP---SNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCE---EEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCCcEeEEEeCCCCCc---eeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999998777777666554333 3334478998554 555578999999874
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.1e-11 Score=117.39 Aligned_cols=237 Identities=6% Similarity=-0.028 Sum_probs=170.4
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE 422 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 422 (604)
+..+...+.++++.++|..+++...++ .|.+||.. +.............+.++++.+++..+++...++.|..||.+
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~--~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKAN--MISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTT--EEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCC--cEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 344556799999999998777665555 79999988 654433322344678999999999988887778999999987
Q ss_pred CCeeeeee----ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 423 GQVLDSWE----GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 423 ~~~~~~~~----~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
++. ..+. ...+..+++.++|..+++...++.|..||. ++...... .....+..+++++++...++...++.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 653 2222 236889999999988887777889999998 43332221 234568899999999877777778899
Q ss_pred EEEecCCCceeeE-eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-eeCCCCCeeEEEEcCCCCcE
Q psy10566 497 HLWDLRDRILLRK-FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 497 ~lwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~v~~sp~~~~~ 574 (604)
..||. +++.... ...... .+..+...++|++.++...++.|.+||. +++.... +..+...+.+++++++ +.+
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~---~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l 238 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPAS---GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG-IDL 238 (299)
T ss_dssp EEECT-TCCEEEEECSSTTC---CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-TCE
T ss_pred EEEcC-CCcEEEeeCCCCCC---cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC-CCE
Confidence 99998 6654432 111122 2233445678887777767889999999 6664332 3335567899999998 677
Q ss_pred EEEEeCCCcEEEECCC
Q psy10566 575 IASVSDDCTVRIWGPH 590 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~ 590 (604)
+++...++.|..|+..
T Consensus 239 ~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 239 WFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEEETTTTEEEEEETT
T ss_pred EEeccCCceEEEECCC
Confidence 7776678889999983
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.49 E-value=9.8e-11 Score=118.70 Aligned_cols=248 Identities=9% Similarity=-0.071 Sum_probs=166.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEEE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYLA 354 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l~ 354 (604)
+.+..+.....+ .++|||||++++.+. .++.|.+||.. +.+....+.-. ......++
T Consensus 58 ~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~----t~~~~~~i~~~~~~~~~~g~~p~~~~ 131 (373)
T 2mad_H 58 SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV----TFLPIADIELPDAPRFDVGPYSWMNA 131 (373)
T ss_pred eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC----CCcEEEEEECCCccccccCCCccceE
Confidence 344455443344 899999999888875 36789999987 33334433211 12356899
Q ss_pred ECCCCCeEEEEeCCCceEEEEEECCCceEEEE-ecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCeeeeee--
Q psy10566 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVK-LNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQVLDSWE-- 430 (604)
Q Consensus 355 ~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~-- 430 (604)
|+|||++|+++.......|.++| .+++.... +... . ++.+.|++ ..+++.+.||.+.++|..++......
T Consensus 132 ~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--~---~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~ 205 (373)
T 2mad_H 132 NTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--T---CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVG 205 (373)
T ss_pred ECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--c---eEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEecc
Confidence 99999999998753113799999 99988777 5422 1 24555655 45667778999999998555442211
Q ss_pred ----c-ee-EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc--cccc-----------CCCCeeEEEECCCCCEEEEEe
Q psy10566 431 ----G-VR-VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS--NLLQ-----------EDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 431 ----~-~~-v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~--~~~~-----------~~~~i~~~~~s~~~~~l~~~~ 491 (604)
+ .+ .....+.+++..++..+..+.+.+.|+...... ..+. .......+.++|+++.++++.
T Consensus 206 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 206 AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred ccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 1 11 123456666666666667889999998654211 1110 012244578999999888875
Q ss_pred c----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEEe
Q psy10566 492 S----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 492 ~----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~l 555 (604)
. .+.|.++|+.+++.+.++..... ...+.++++|+ .++++. .++.|.+||..+++.+.++
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~----p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHD----VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCEEEEEEECCCC----cCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 4 35799999999999888864332 23345579999 777777 4899999999999998884
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.9e-12 Score=144.32 Aligned_cols=247 Identities=15% Similarity=0.069 Sum_probs=157.4
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECC-----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKD-----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC--- 370 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~d-----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~--- 370 (604)
+|...+..++|||||++||.++.+ ..|++||+..+ .. ... ..+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg--~~--~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG--KP--LAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC--CE--EEE-EEEEEESCCCEESTT-SEEEEEECCCC---
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CC--CCc-cCCCceeccEEEECC-CEEEEEEecCcccc
Confidence 454578899999999999887654 36999999832 22 211 111222357899999 99998887652
Q ss_pred ---------eEEEEEECCCceE--EEEec-CCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCC--e-eeeee
Q psy10566 371 ---------HELWVWNIETELL--RVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQ--V-LDSWE 430 (604)
Q Consensus 371 ---------~~i~vwd~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~--~-~~~~~ 430 (604)
..|++|++.++.. ...+. ..+...+..+.|+|||++++..+.++ .|++||+++. . ...+.
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 2499999987652 22222 12233588999999999998887654 8999999543 2 33343
Q ss_pred ce--eEEEEEEcCCCCEEEEEeCC----CeEEEEEcCCC--cccccccC-CCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 431 GV--RVNCLWCRSDGKSVLAADTH----HRIRTYNFEHL--TDSNLLQE-DHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 431 ~~--~v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~--~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
.. .+... ++++|+.++..+.+ +.|.+||+.+. ....++.+ ...+..++++ ++.++++...++..++|.+
T Consensus 314 ~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 314 PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 22 23333 34889988887764 45999998874 23333333 3345667777 5667778888888777655
Q ss_pred C-CCceeeEeeccccceEEEEeeeCCCCCcEEE-EEe---CCCcEEEEeCCCCcceEEee
Q psy10566 502 R-DRILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGS---EDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 502 ~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs---~dg~I~iwd~~~~~~~~~l~ 556 (604)
. ++...+.+..+... .+....++++++.++ +.+ ..++|++||+.+++ ...+.
T Consensus 392 ~~~g~~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l~ 448 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIG--SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPWE 448 (741)
T ss_dssp ETTSCEEEECBCSSSC--EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEECS
T ss_pred eCCCCceeeccCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEe
Confidence 4 45555555432111 344455567876555 332 34789999999876 33443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-10 Score=114.35 Aligned_cols=226 Identities=12% Similarity=0.097 Sum_probs=152.0
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV 425 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 425 (604)
+..-..+..|+|++..|+.+...+ +.|+.||..++.... +. ....+.+++++++|+++++ . ++.|.+||.+...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~-~~i~~~d~~~~~~~~-~~--~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPA-KKVCRWDSFTKQVQR-VT--MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTT-TEEEEEETTTCCEEE-EE--CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred CCccccCCeEECCCCEEEEEECCC-CEEEEEECCCCcEEE-Ee--CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 344556889999766666555443 389999999876533 22 2367999999999995554 3 6789999986544
Q ss_pred eeeee-------ceeEEEEEEcCCCCEEEEEeCC---------CeEEEEEcCC-CcccccccCCCCeeEEEECCCCCEEE
Q psy10566 426 LDSWE-------GVRVNCLWCRSDGKSVLAADTH---------HRIRTYNFEH-LTDSNLLQEDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 426 ~~~~~-------~~~v~~l~~s~~g~~l~~~~~d---------g~I~i~d~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~ 488 (604)
+..+. ...+++++++++|+.+++.... ..-.+|.+.. +..............++|+|+++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEE
Confidence 43322 2368899999999966654321 2234444432 22222333344567899999998775
Q ss_pred EE-ecCCeEEEEec--CCCcee--eEe---eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC
Q psy10566 489 LN-VSTQGVHLWDL--RDRILL--RKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR 560 (604)
Q Consensus 489 ~~-~~dg~I~lwd~--~~~~~~--~~~---~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~ 560 (604)
++ +.++.|.+||+ .++... +.+ ..... ....+...++|++.++...++.|.+||..+++.+..+..+..
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~---~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~ 241 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ---IPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD 241 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC---EEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC---CCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC
Confidence 54 55789999997 455432 112 21112 223344568898888888888999999999999999988878
Q ss_pred CeeEEEEc-CCCCcEEEEEeC
Q psy10566 561 TVSCVAWN-PVYHQMIASVSD 580 (604)
Q Consensus 561 ~V~~v~~s-p~~~~~l~s~s~ 580 (604)
.+++++|. |++..++++...
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEBC
T ss_pred CceEEEEeCCCCCEEEEEcCC
Confidence 89999998 775556666654
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-11 Score=120.02 Aligned_cols=264 Identities=14% Similarity=0.069 Sum_probs=175.6
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l 353 (604)
.+.+..+..-..+ . +++||||+++++++ .++.|.+||.. +.+....+.-. ......+
T Consensus 69 ~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~----t~~v~~~I~v~~g~r~~~g~~P~~~ 142 (386)
T 3sjl_D 69 GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV----TLLPTADIELPDAPRFLVGTYPWMT 142 (386)
T ss_dssp TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEEEEETTCCCCCBSCCGGGE
T ss_pred CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC----CCeEEEEEECCCccccccCCCCceE
Confidence 4555555544445 4 99999999887765 36789999998 44444444321 1246679
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeec
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEG 431 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~ 431 (604)
+|+|||++++++.......|.++|+.+++.+..+... + . ...+....+.+++.+.||.+.+.++. ++.......
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~ 218 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE 218 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecc
Confidence 9999999999886531138999999999998888632 1 1 22333345677788888988888884 443221111
Q ss_pred e------eE-EEEEE-cCCCCEEEEEeCCCeEEEEEcCCCccc--cccc-----------CCCCeeEEEECCCCCEEEEE
Q psy10566 432 V------RV-NCLWC-RSDGKSVLAADTHHRIRTYNFEHLTDS--NLLQ-----------EDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 432 ~------~v-~~l~~-s~~g~~l~~~~~dg~I~i~d~~~~~~~--~~~~-----------~~~~i~~~~~s~~~~~l~~~ 490 (604)
. .+ ....| .++|+.++ .+.+|.|++.|+.+.... ..+. .......++++++++.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~ 297 (386)
T 3sjl_D 219 VFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLL 297 (386)
T ss_dssp CCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred eeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEE
Confidence 0 11 12344 35665444 666899999999765321 1110 12234457889999999887
Q ss_pred ec----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEEeeCC
Q psy10566 491 VS----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 491 ~~----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~l~~h 558 (604)
.. .++|.++|+.+++.++++.... ....+.++++++ +|++.. .++.|.++|..+++.+.++..-
T Consensus 298 ~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 298 VDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred eccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 64 2579999999999998887433 233455678986 666654 5899999999999999988743
Q ss_pred CCCeeEEEEcCC
Q psy10566 559 TRTVSCVAWNPV 570 (604)
Q Consensus 559 ~~~V~~v~~sp~ 570 (604)
+..+.+.+++|
T Consensus 374 -~~p~~l~~s~d 384 (386)
T 3sjl_D 374 -GHGPQVITTAD 384 (386)
T ss_dssp -CSSCCEEEECC
T ss_pred -CCCceeEECCc
Confidence 33466677765
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.3e-11 Score=122.10 Aligned_cols=274 Identities=10% Similarity=0.010 Sum_probs=176.9
Q ss_pred CCCCeEEEEEC-C----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--------CceEEEEEE
Q psy10566 311 PDGLKLATGSK-D----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--------DCHELWVWN 377 (604)
Q Consensus 311 pdg~~lasgs~-d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--------~~~~i~vwd 377 (604)
++++.+++... + +.|.++|.. +.+.+..+..-..+ .++++||+++++++... +...|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~----t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGS----TGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETT----TTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECC----CCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 34554444433 2 689999988 55666666654455 89999999999888631 123799999
Q ss_pred CCCceEEEEecCC-C-----CCCeEEEEEecCCCEEEEEec--CCeEEEEEcC-CCeeeeeeceeEEEEEEcCCC-CEEE
Q psy10566 378 IETELLRVKLNHS-P-----EDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDG-KSVL 447 (604)
Q Consensus 378 ~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g-~~l~ 447 (604)
..+++.+..+..+ . ......+.|+|||++++++.. ++.|.+.|+. ++.+..+.-... ....|++ ..++
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v 233 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFY 233 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEE
Confidence 9999988776532 0 123567899999999999874 5789999995 555555543211 2223332 4455
Q ss_pred EEeCCCeEEEEEcCCCcccc----ccc-CCCC-eeEEEECCCCCEEEEEecCCeEEEEecCCCcee--eEeecc-----c
Q psy10566 448 AADTHHRIRTYNFEHLTDSN----LLQ-EDHP-VMSFTIDATDRLALLNVSTQGVHLWDLRDRILL--RKFQGV-----T 514 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~----~~~-~~~~-i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~--~~~~~~-----~ 514 (604)
+.+.||++.+.+..+.+... .+. ...+ ...+.+.+++..++.....+.|.+.|....... ..+... .
T Consensus 234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 56666766666664333221 111 1112 124567899988888888899999998765321 111100 0
Q ss_pred cceEE--EEeeeCCCCCcEEEEEeC----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CC
Q psy10566 515 QGQFT--IHSCFGGANQDFVASGSE----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DD 581 (604)
Q Consensus 515 ~~~~~--i~~~~~~~~~~~l~sgs~----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~D 581 (604)
..... ...+.++++++.+++... ++.|.++|..+.+.+.++.... ...+++|+|++..+++++. .+
T Consensus 314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTT
T ss_pred cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCC
Confidence 00000 001233577776666532 3579999999999999886432 4799999999432666666 69
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
+.|.++|+.+.+
T Consensus 393 ~~VsVID~~t~k 404 (426)
T 3c75_H 393 QTLHIYDAATGE 404 (426)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEECCCCC
Confidence 999999999876
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-10 Score=120.19 Aligned_cols=233 Identities=7% Similarity=-0.024 Sum_probs=162.1
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEcCC-C
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDIEG-Q 424 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~-~ 424 (604)
.....++|+|+++.+++...++ .|++||..++........ . .... ++|+++++.++++..++ .|..++..+ .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~--~I~~id~~~g~~~~~~~~-~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDP--RVRLISVDDNKVTTVHPG-F-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTT--EEEEEETTTTEEEEEEET-C-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCC--cEEEEECCCCEEEEeecc-C-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 3578999999998666655555 899999998876655542 2 2234 99999999999988866 788888853 2
Q ss_pred eeeee------eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc----cc-CCCC--eeEEEECCC-CCEEEEE
Q psy10566 425 VLDSW------EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL----LQ-EDHP--VMSFTIDAT-DRLALLN 490 (604)
Q Consensus 425 ~~~~~------~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~----~~-~~~~--i~~~~~s~~-~~~l~~~ 490 (604)
..... ....+.+++++|++..++++..++.|+.||..+...... .. .... ...++++|+ +.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 22333 234678899999666666678889999999987653322 11 1111 239999995 5555555
Q ss_pred ecCCeEEEEecCCCceeeEeeccc---c---------ceEEEEeeeCCCCCcEEEEEe-CCCcEEEEeCCCCcceEEeeC
Q psy10566 491 VSTQGVHLWDLRDRILLRKFQGVT---Q---------GQFTIHSCFGGANQDFVASGS-EDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 491 ~~dg~I~lwd~~~~~~~~~~~~~~---~---------~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd~~~~~~~~~l~~ 557 (604)
..++.|+.|+.... +..+.++. . .......++++++|+++++-+ .++.|+.|+..++. +.++.+
T Consensus 286 ~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g 362 (409)
T 3hrp_A 286 QNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAG 362 (409)
T ss_dssp TTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEE
T ss_pred CCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeC
Confidence 66789999997643 33333322 0 001123345578999888887 89999999987776 444444
Q ss_pred C---------------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 558 H---------------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 558 h---------------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+ -.....++++|+ +.++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 4 245889999999 888988888999988765
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=5.8e-10 Score=111.08 Aligned_cols=223 Identities=12% Similarity=0.039 Sum_probs=146.5
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW 429 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 429 (604)
..+.+|+|++..++.++..+ +.|+.||..++..... . ....+.+++|+++|+++++. . ..|.+||.++..+..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~-~~i~~~d~~~~~~~~~-~--~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILE-RELHELHLASGRKTVH-A--LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGG-TEEEEEETTTTEEEEE-E--CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCC-CEEEEEECCCCcEEEE-E--CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEE
Confidence 45678999866555555433 2899999988865432 2 23579999999999877654 3 4499999854333322
Q ss_pred e-------ceeEEEEEEcCCCCEEEEEeC------CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe-cCCe
Q psy10566 430 E-------GVRVNCLWCRSDGKSVLAADT------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV-STQG 495 (604)
Q Consensus 430 ~-------~~~v~~l~~s~~g~~l~~~~~------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~ 495 (604)
. ...+.+++++++|+.+++... .+.|..++ +++.............++|+|+++.++++. .++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 1 136889999999997665442 24566666 333333323334567899999998776654 5688
Q ss_pred EEEEecC--CC-cee--eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc-C
Q psy10566 496 VHLWDLR--DR-ILL--RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN-P 569 (604)
Q Consensus 496 I~lwd~~--~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s-p 569 (604)
|.+||+. ++ ... ..+............+...++|++.++...++.|.+||. +++.+..+..+...+++++|+ |
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEEST
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecC
Confidence 9999986 55 321 122111100012233455688888777777789999998 677778887777789999998 8
Q ss_pred CCCcEEEEEeCC
Q psy10566 570 VYHQMIASVSDD 581 (604)
Q Consensus 570 ~~~~~l~s~s~D 581 (604)
+++.++++...+
T Consensus 282 d~~~L~vt~~~~ 293 (326)
T 2ghs_A 282 DASRLLVTSARE 293 (326)
T ss_dssp TSCEEEEEEBCT
T ss_pred CCCEEEEEecCC
Confidence 844555555554
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.40 E-value=9.6e-10 Score=107.56 Aligned_cols=237 Identities=7% Similarity=-0.055 Sum_probs=168.0
Q ss_pred ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q psy10566 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423 (604)
Q Consensus 344 ~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 423 (604)
......+.++++.++|...++...++ .|.+||.. ++............+.++++.+++..+++...++.|..||.++
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~--~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g 92 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKAN--KISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKG 92 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTT--EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCC--eEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCC
Confidence 33456789999999998777766666 79999988 5544322222335689999999999888777788999999886
Q ss_pred Ceeeeee----ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-cc-CCCCeeEEEECCCCCEEEEEecCCeEE
Q psy10566 424 QVLDSWE----GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQ-EDHPVMSFTIDATDRLALLNVSTQGVH 497 (604)
Q Consensus 424 ~~~~~~~----~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~ 497 (604)
+.. .+. ...+..+++.++|+.+++...++.|..||.. +..... .. ....+..++++++++..++...++.|.
T Consensus 93 ~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 543 332 2468899999999988777778899999987 433222 12 345688999999999666666678999
Q ss_pred EEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-eeCCCCCeeEEEEcCCCCcEEE
Q psy10566 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
.||. +++... +...... .....+...++|++.++....+.|.+||. +++.... +..+...+.+++++++ +.+++
T Consensus 171 ~~~~-~g~~~~-~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v 245 (300)
T 2qc5_A 171 RITN-TGKLEE-YPLPTNA-AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKN-SEIWF 245 (300)
T ss_dssp EECT-TCCEEE-EECSSTT-CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-TCEEE
T ss_pred EECC-CCcEEE-eeCCCCC-CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCC-CCEEE
Confidence 9998 554433 3221111 12233444678887777767788999998 4554332 3345567899999999 67777
Q ss_pred EEeCCCcEEEECCC
Q psy10566 577 SVSDDCTVRIWGPH 590 (604)
Q Consensus 577 s~s~Dg~I~iW~~~ 590 (604)
+...++.|..|+..
T Consensus 246 ~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 246 TEWGANQIGRITND 259 (300)
T ss_dssp EETTTTEEEEECTT
T ss_pred eccCCCeEEEECCC
Confidence 77677899999984
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-10 Score=114.52 Aligned_cols=232 Identities=13% Similarity=0.105 Sum_probs=151.6
Q ss_pred EeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q psy10566 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI 421 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 421 (604)
.+..........+|+|+++.|+.++..+ +.|..|+.. +... .+. .....+..++++++|+.+++...++.|..|+.
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~-~~i~~~~~~-g~~~-~~~-~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVG-RRVLGWRED-GTVD-VLL-DATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTT-TEEEEEETT-SCEE-EEE-ESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCC-CEEEEEeCC-CCEE-EEe-CCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 3334455677899999999555555433 289999984 4432 222 23456899999999997776666789999998
Q ss_pred CCCeeeee---ec---eeEEEEEEcCCCCEEEE----EeC-------------CCeEEEEEcCCCcccccccCCCCeeEE
Q psy10566 422 EGQVLDSW---EG---VRVNCLWCRSDGKSVLA----ADT-------------HHRIRTYNFEHLTDSNLLQEDHPVMSF 478 (604)
Q Consensus 422 ~~~~~~~~---~~---~~v~~l~~s~~g~~l~~----~~~-------------dg~I~i~d~~~~~~~~~~~~~~~i~~~ 478 (604)
+++..... .+ ..+.++++.++|+..++ +.. .+.|..||..+++..... .......+
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl 193 (305)
T 3dr2_A 115 DGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGL 193 (305)
T ss_dssp TSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEE
T ss_pred CCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcce
Confidence 76543222 11 13678999999997775 322 256788887666554444 44556789
Q ss_pred EECCCCCEEEEEecC------CeEEEEecCCCcee--eEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 479 TIDATDRLALLNVST------QGVHLWDLRDRILL--RKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 479 ~~s~~~~~l~~~~~d------g~I~lwd~~~~~~~--~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
+|+|+++.++++... +.|++||+..+... ..+.. .... ...+...++|++. +++.+ .|.+|+. .+
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~---pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g 267 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL---PDGFCVDRGGWLW-SSSGT-GVCVFDS-DG 267 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC---CCSEEECTTSCEE-ECCSS-EEEEECT-TS
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC---CCeEEECCCCCEE-EecCC-cEEEECC-CC
Confidence 999999988887665 68999998765411 11111 0110 1123345788844 44444 4999998 57
Q ss_pred cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 550 LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 550 ~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
+.+..+..+. .+.+++|+|+ +..|+.++.++..++
T Consensus 268 ~~~~~~~~~~-~~~~~~f~~d-~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 268 QLLGHIPTPG-TASNCTFDQA-QQRLFITGGPCLWML 302 (305)
T ss_dssp CEEEEEECSS-CCCEEEECTT-SCEEEEEETTEEEEE
T ss_pred CEEEEEECCC-ceeEEEEeCC-CCEEEEEcCCeEEEE
Confidence 7777777665 5899999988 566666666654443
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.4e-10 Score=117.45 Aligned_cols=237 Identities=11% Similarity=0.063 Sum_probs=158.8
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
...+.++|+++|+++++...++.|++||.+ ... ....... ..... ++|+|+++.|+++..++...|++|+..++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~--~g~--~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVD--DNK--VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETT--TTE--EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECC--CCE--EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 468899999999988887778999999987 222 2222222 23334 99999999998888765337999998776
Q ss_pred eEEEEe---cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-----ce-eE--E-EEEEcCC-CCEEEE
Q psy10566 382 LLRVKL---NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-----GV-RV--N-CLWCRSD-GKSVLA 448 (604)
Q Consensus 382 ~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~-~v--~-~l~~s~~-g~~l~~ 448 (604)
.....+ .......+.+++++|++..|+++..++.|+.||.++.....+. +. .. . .++++|+ +..+++
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 543333 1113456788999996556666777889999999755444331 11 11 2 8999995 555555
Q ss_pred EeCCCeEEEEEcCCCcccccccC---------------CCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQE---------------DHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~---------------~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~ 512 (604)
-..++.|+.|+.... ....... -.....++++++|+++++-. .++.|+.||+.++.. .++.+
T Consensus 285 d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 566789999997653 1111111 23478999999999777777 789999999877753 44443
Q ss_pred ccc------------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 513 VTQ------------GQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 513 ~~~------------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
+.. .......++++++|.++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 310 0011233444577777777777888877764
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-10 Score=118.83 Aligned_cols=250 Identities=13% Similarity=0.036 Sum_probs=168.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l 353 (604)
.+.+..+..-..+ .++++|||++|+++. .++.|.++|.. +.+.+..+.-. ......+
T Consensus 109 ~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~----t~~vv~~I~v~g~~r~~~g~~P~~~ 182 (426)
T 3c75_H 109 GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV----TFLPIADIELPDAPRFLVGTYQWMN 182 (426)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEEEEETTCCCCCBSCCGGGS
T ss_pred CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC----CCcEEEEEECCCccccccCCCcceE
Confidence 4455555544445 799999999887775 36789999988 44444444311 2345678
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcC-CCeeee---
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIE-GQVLDS--- 428 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~-~~~~~~--- 428 (604)
+|+|||++++++.......|.+.|+.+++.+..+.... +....|++ ..+++.+.||.+.+.+.. ++....
T Consensus 183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~ 257 (426)
T 3c75_H 183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-----CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTE 257 (426)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-----EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECC
T ss_pred EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeee
Confidence 99999999999875322389999999999888876421 12333433 455666677777766663 222211
Q ss_pred -ee--cee-EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-----c-----c---CCCCeeEEEECCCCCEEEEEe
Q psy10566 429 -WE--GVR-VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-----L-----Q---EDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 429 -~~--~~~-v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-----~-----~---~~~~i~~~~~s~~~~~l~~~~ 491 (604)
+. ..+ ...+.+.+++..++..+..+.+.+.|......... . . .......++++|+++.+++..
T Consensus 258 ~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~ 337 (426)
T 3c75_H 258 VFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV 337 (426)
T ss_dssp CCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE
T ss_pred eeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe
Confidence 10 001 12346788999888888899999999865431110 0 0 012223478999999888775
Q ss_pred c----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEEe
Q psy10566 492 S----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 492 ~----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~l 555 (604)
. .+.|.++|..+.+.+.++..... ...+.++++|+ ++++.. .++.|.++|..+++.+.++
T Consensus 338 ~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~----P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 338 DQRDEWKHKAASRFVVVLNAETGERINKIELGHE----IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE----ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cccccccccCCCCEEEEEECCCCeEEEEEECCCC----cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 3 35799999999999998864331 23345579998 888887 5899999999999999887
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.36 E-value=6.3e-10 Score=109.27 Aligned_cols=229 Identities=15% Similarity=0.102 Sum_probs=151.5
Q ss_pred cccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
+..+..---+..|+|++ .++++...++.|..||... ... ..+. ....+.+++++|+|+++++ .. + .|.+
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~--~~~---~~~~-~~~~~~~i~~~~dG~l~v~-~~-~--~l~~ 77 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFT--KQV---QRVT-MDAPVSSVALRQSGGYVAT-IG-T--KFCA 77 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTT--CCE---EEEE-CSSCEEEEEEBTTSSEEEE-ET-T--EEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCC--CcE---EEEe-CCCceEEEEECCCCCEEEE-EC-C--eEEE
Confidence 33444556688999964 4666666788999999872 222 2222 3567999999999995544 43 3 5999
Q ss_pred EECCCceEEEEecCC---CCCCeEEEEEecCCCEEEEEec-----------CCeEEEEEcCCCeeeeeece-eEEEEEEc
Q psy10566 376 WNIETELLRVKLNHS---PEDSLTSCSWNRDGTKFVCGGI-----------RGQFYQCDIEGQVLDSWEGV-RVNCLWCR 440 (604)
Q Consensus 376 wd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~-~v~~l~~s 440 (604)
||..+++........ ....+..++++|+|+.+++... .+.|+.++.+++........ ..+.++++
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~s 157 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWS 157 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEEC
T ss_pred EECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEc
Confidence 999888754433211 2235788999999997665432 23455555556544433332 56889999
Q ss_pred CCCCEEEEE-eCCCeEEEEEcC--CCccc--ccc----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 441 SDGKSVLAA-DTHHRIRTYNFE--HLTDS--NLL----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 441 ~~g~~l~~~-~~dg~I~i~d~~--~~~~~--~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
|+++.++.+ +.++.|.+||+. ++... ..+ .....+..++++++|++.++....+.|..||..+++.+..+.
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 999977554 557899999974 33221 111 123457889999999888777778899999999999888887
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
.+...... +++..|+++.|+.++.
T Consensus 238 ~p~~~~t~--~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 238 LPVDKTTS--CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CSSSBEEE--EEEESGGGCEEEEEEB
T ss_pred CCCCCceE--EEEeCCCCCEEEEEcC
Confidence 66443322 2343477766655543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=8.2e-11 Score=129.93 Aligned_cols=242 Identities=15% Similarity=0.205 Sum_probs=154.0
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEE-----CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc--
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGS-----KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC-- 370 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs-----~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~-- 370 (604)
.+|...+..++|||||++||.+. ...+|++||+.++ .... ..+.+ .....++|+ |++.|+.++.+..
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg--~~~~-~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK--QPLE-TPLKD--VKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC--SEEE-EEEEE--EESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC--CCCc-cccCC--ceeccEEEe-CCCEEEEEEecCccc
Confidence 34667899999999999988542 3357999999832 2211 12221 113567899 9999999887741
Q ss_pred ---------eEEEEEECCCceE--EEEecC-C-CCCCeEEEEEecCCCEEEEEec----CCeEEEEEcCCC--eeeeeec
Q psy10566 371 ---------HELWVWNIETELL--RVKLNH-S-PEDSLTSCSWNRDGTKFVCGGI----RGQFYQCDIEGQ--VLDSWEG 431 (604)
Q Consensus 371 ---------~~i~vwd~~~~~~--~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~--~~~~~~~ 431 (604)
..|++|++.++.. ...+.. . +...+.++.|+|||++++.... ...|+++|+++. ....+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 2599999987642 222221 2 2345788999999998866543 248999998532 3333333
Q ss_pred e--eEEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEecCC---eEEEE
Q psy10566 432 V--RVNCLWCRSDGKSVLAADT----HHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVSTQ---GVHLW 499 (604)
Q Consensus 432 ~--~v~~l~~s~~g~~l~~~~~----dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~I~lw 499 (604)
. ..... ++++|..++..+. .+.|..+|+.+... ..+..+...+. .++++++.|+....++ .|++|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 2 22222 5666766665544 26799999987654 34455555554 8889999888776644 68999
Q ss_pred ecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC----CcEEEEeCCCCcc
Q psy10566 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED----GKVYIWHVKRELP 551 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d----g~I~iwd~~~~~~ 551 (604)
|+..+ ..+.+...... .+....++++++.++....+ +.|+.||+.+++.
T Consensus 356 d~~g~-~~~~l~~p~~~--~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 356 DYEGK-RVREVALPGLG--SVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CTTSC-EEEEECCSSSS--EEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCCC-eeEEeecCCCc--eEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 98754 33444322111 23334455677666555444 8899999987763
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.34 E-value=1e-10 Score=117.51 Aligned_cols=266 Identities=7% Similarity=-0.048 Sum_probs=167.8
Q ss_pred CcEEEEEEcCCCCeEEEEE--CCCeEEEEEeCCCCceeEee----EEeccCCCCeeEEEECCCCCeEEEEeC-----CCc
Q psy10566 302 DEVWFCKFSPDGLKLATGS--KDTTVIIWDVDPVTFTCQHR----KTLEGHTLGVAYLAWSPDSSHLLVVGP-----EDC 370 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs--~dg~i~iwd~~~~~~~~~~~----~~l~~h~~~V~~l~~spd~~~l~s~~~-----d~~ 370 (604)
..+..++++|+|+++++.. .++.++||.++ ++..... ....+|-..+..++++++++.+++-.. +.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~- 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP- 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC-
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC-
Confidence 6799999999999888864 23446777775 2221110 011234568999999999876655433 34
Q ss_pred eEEEEEECCCceEEEEecCC-----CCCCeEEEEEecCCCEE-EEEe---cCCeEEEEEcC-CCeeeeeecee---EEEE
Q psy10566 371 HELWVWNIETELLRVKLNHS-----PEDSLTSCSWNRDGTKF-VCGG---IRGQFYQCDIE-GQVLDSWEGVR---VNCL 437 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l-~s~~---~dg~i~iwd~~-~~~~~~~~~~~---v~~l 437 (604)
.|.+||+.+++....+... +...+..+++++++..+ ++.. .++.|.+||+. ++..+...++. ....
T Consensus 94 -~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 -KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp -EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred -eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 7999999999866655421 22356899999865554 4444 57899999995 55554443320 0013
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC-eEEEEecC---CCc-----eee
Q psy10566 438 WCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ-GVHLWDLR---DRI-----LLR 508 (604)
Q Consensus 438 ~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~I~lwd~~---~~~-----~~~ 508 (604)
.+..+|..+.+.+.++.+..|. ..+..++++|+++.++++...+ .++.++.. .+. ...
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp CCEETTEECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred ceeECCEEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 3444566666666777665553 2367899999999888887765 56555532 111 001
Q ss_pred --EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 509 --KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 509 --~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
...++... ...+.++++|+++++...++.|.+||..+++....... +...+.+++|.++ +.++++.+..+.+.
T Consensus 240 ~~~~~g~~g~---pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 240 KIERYSEKPI---CDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLHHSA 315 (343)
T ss_dssp TCEEEEECCS---CSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT-SCEEEEECCGGGSG
T ss_pred ceEecccCCC---CceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC-CcEEEEeCcccccc
Confidence 11111111 11134467899999998999999999866764333332 2456899999998 77888877555554
Q ss_pred EEC
Q psy10566 586 IWG 588 (604)
Q Consensus 586 iW~ 588 (604)
+|.
T Consensus 316 ~f~ 318 (343)
T 2qe8_A 316 PLN 318 (343)
T ss_dssp GGB
T ss_pred ccc
Confidence 443
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-10 Score=125.08 Aligned_cols=238 Identities=11% Similarity=0.066 Sum_probs=157.2
Q ss_pred CCCCeeEEEECCCCCeEEEEeCC-C--ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--------
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPE-D--CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-------- 414 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d-~--~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-------- 414 (604)
|...+..++|||||++|+.+... | ...|++||+.+++........ .....++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 55578889999999998865432 2 148999999999865432211 113567899 999999988774
Q ss_pred -----eEEEEEcCC-----Ceeeeeec-e--eEEEEEEcCCCCEEEEEeC----CCeEEEEEcCCC--cccccccCCCCe
Q psy10566 415 -----QFYQCDIEG-----QVLDSWEG-V--RVNCLWCRSDGKSVLAADT----HHRIRTYNFEHL--TDSNLLQEDHPV 475 (604)
Q Consensus 415 -----~i~iwd~~~-----~~~~~~~~-~--~v~~l~~s~~g~~l~~~~~----dg~I~i~d~~~~--~~~~~~~~~~~i 475 (604)
.|++|++.. ..+..... + ....+.++|||++++.... ...|+++|+.+. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 499999842 12333333 2 3678899999998866543 248999999776 333344444444
Q ss_pred eEEEECCCCCEEEEEec----CCeEEEEecCCCce--eeEeeccccceEEEEeeeCCCCCcEEEEEeC-CC--cEEEEeC
Q psy10566 476 MSFTIDATDRLALLNVS----TQGVHLWDLRDRIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DG--KVYIWHV 546 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~----dg~I~lwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg--~I~iwd~ 546 (604)
... +++++..++..+. .+.|..+|+.++.. .+.+..+..... .+++++++|+.... ++ .|++||+
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-----~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-----TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-----EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-----EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 444 6666766665544 25799999988654 345555555432 23467777766654 44 6899998
Q ss_pred CCCcceEEee-CCCCCeeEEEEcCCCCcEEEEEeCC---CcEEEECCCCCC
Q psy10566 547 KRELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDD---CTVRIWGPHLNT 593 (604)
Q Consensus 547 ~~~~~~~~l~-~h~~~V~~v~~sp~~~~~l~s~s~D---g~I~iW~~~~~~ 593 (604)
..+. ...+. .+.+.+..+.++|++..++++.+.. ++|..||+.+++
T Consensus 358 ~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 358 EGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 8543 44443 3456678888898855555555432 789999997764
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.29 E-value=5.2e-10 Score=110.32 Aligned_cols=237 Identities=13% Similarity=0.041 Sum_probs=154.1
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+..+..+........|+|+|+ +++++..++.|..|+.. +. ...+..+...+..++++++|+.+++...++
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~---g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~- 107 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED---GT---VDVLLDATAFTNGNAVDAQQRLVHCEHGRR- 107 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT---SC---EEEEEESCSCEEEEEECTTSCEEEEETTTT-
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC---CC---EEEEeCCCCccceeeECCCCCEEEEECCCC-
Confidence 34445555666788899999998 66777778899999864 12 233444566789999999998665544445
Q ss_pred eEEEEEECCCceEEEEecC---CCCCCeEEEEEecCCCEEEE----Eec-------------CCeEEEEEcC-CCeeeee
Q psy10566 371 HELWVWNIETELLRVKLNH---SPEDSLTSCSWNRDGTKFVC----GGI-------------RGQFYQCDIE-GQVLDSW 429 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s----~~~-------------dg~i~iwd~~-~~~~~~~ 429 (604)
.|..|+.. +........ .....+..+++.++|+.+++ |.. .+.|+.+|.. ++.....
T Consensus 108 -~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 108 -AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp -EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred -EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 79999986 543322211 11234678999999998886 332 2567788874 4433322
Q ss_pred eceeEEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCccc--ccc--cCCCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 430 EGVRVNCLWCRSDGKSVLAADTH------HRIRTYNFEHLTDS--NLL--QEDHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 430 ~~~~v~~l~~s~~g~~l~~~~~d------g~I~i~d~~~~~~~--~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
.......++|+|+++.++++... +.|.+|++...... ..+ ........++++++|+ +.+++. +.|.+|
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~-~gv~~~ 263 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSG-TGVCVF 263 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCS-SEEEEE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecC-CcEEEE
Confidence 22356789999999988887765 78999998753210 111 1233456789999999 444544 459999
Q ss_pred ecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
|. +++.+..+..... +..+.++++++.|+.++.++ ++.++
T Consensus 264 ~~-~g~~~~~~~~~~~----~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 264 DS-DGQLLGHIPTPGT----ASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CT-TSCEEEEEECSSC----CCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred CC-CCCEEEEEECCCc----eeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 98 5666666665432 22233348888888877664 44333
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=4.8e-09 Score=104.42 Aligned_cols=220 Identities=12% Similarity=0.060 Sum_probs=144.8
Q ss_pred cEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 303 EVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 303 ~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
-..+.+|+|++. ++++...++.|..||.. ++... .+. ....+.+++|+|+|+++++. .+ .|.+||..++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~--~~~~~---~~~-~~~~v~~i~~~~dg~l~v~~-~~---gl~~~d~~~g 119 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLA--SGRKT---VHA-LPFMGSALAKISDSKQLIAS-DD---GLFLRDTATG 119 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETT--TTEEE---EEE-CSSCEEEEEEEETTEEEEEE-TT---EEEEEETTTC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECC--CCcEE---EEE-CCCcceEEEEeCCCeEEEEE-CC---CEEEEECCCC
Confidence 456789999754 56666678899999987 22221 222 34579999999999877654 33 4999999888
Q ss_pred eEEEEecCC---CCCCeEEEEEecCCCEEEEEec------CCeEEEEEcCCCeeeeeec-eeEEEEEEcCCCCEEEEE-e
Q psy10566 382 LLRVKLNHS---PEDSLTSCSWNRDGTKFVCGGI------RGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAA-D 450 (604)
Q Consensus 382 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~-~~v~~l~~s~~g~~l~~~-~ 450 (604)
+........ ....+.+++++|+|+.+++... .+.|..++ +++....... .....++++++++.++.+ +
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 754433211 1235889999999997665542 25677777 5543322222 246789999999877655 4
Q ss_pred CCCeEEEEEcC--CC-ccc--ccc----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 451 THHRIRTYNFE--HL-TDS--NLL----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 451 ~dg~I~i~d~~--~~-~~~--~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
.++.|.+||+. ++ ... ..+ .....+..++++++|.+.++...++.|.+||. +++.+..+..+... +.
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~---~~ 274 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ---TT 274 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB---EE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCC---cE
Confidence 56899999986 43 211 111 12345678999999987777767789999998 56666666654432 33
Q ss_pred eeeCC-CCCcEEEEEeC
Q psy10566 522 SCFGG-ANQDFVASGSE 537 (604)
Q Consensus 522 ~~~~~-~~~~~l~sgs~ 537 (604)
++.++ ++++.|+.++.
T Consensus 275 ~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 275 CPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEESTTSCEEEEEEB
T ss_pred EEEEecCCCCEEEEEec
Confidence 34443 77766655443
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.8e-10 Score=115.82 Aligned_cols=174 Identities=9% Similarity=0.058 Sum_probs=127.9
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC-------ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT-------FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~-------~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.+..+++++...++++|+.++ +++|+++... ...+..... .+.. |+.++| |+++|+++ .++ .|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~--~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRN--ALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESS--EEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCC--cEEE
Confidence 688999999999999999875 6669876111 002222222 3556 999999 88999988 555 8999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
||+.+........ .+...+.++.+.+. .+++++.||.+.+||+....... ....|+|++|+|+| ++.|..||++
T Consensus 111 ~dv~sl~~~~~~~-~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 111 LDLEELSEFRTVT-SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp EESSSTTCEEEEE-ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE--EEEEETTSCE
T ss_pred EEchhhhccCccc-eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 9987755333332 34566887777654 38999999999999996333222 33579999999999 6789999999
Q ss_pred EEEEcCCCcc--cccc----------cCCCCeeEEEECCCCCEEEEE
Q psy10566 456 RTYNFEHLTD--SNLL----------QEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 456 ~i~d~~~~~~--~~~~----------~~~~~i~~~~~s~~~~~l~~~ 490 (604)
++|+...... ...+ .+...|.++.|.+++.++++=
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9998887663 2222 257889999999999988864
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=3.1e-10 Score=113.93 Aligned_cols=254 Identities=6% Similarity=-0.078 Sum_probs=165.2
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC--------CCceEEEEEECCCceEEEEecCCC----
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP--------EDCHELWVWNIETELLRVKLNHSP---- 391 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~--------d~~~~i~vwd~~~~~~~~~~~~~~---- 391 (604)
+|.+.|.. +.+.+.++.....+ .+.++||+++++++.. .....|.+||..+++....+..+.
T Consensus 47 ~vsvID~~----t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAG----CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEETT----TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred eEEEEECC----CCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc
Confidence 88899988 55666777655555 7999999999998863 112389999999999988875320
Q ss_pred --CCCeEEEEEecCCCEEEEEec--CCeEEE--EEcCCCeeeeeeceeEEEEEEcCCC-CEEEEEeCCCeEEEEEcCC--
Q psy10566 392 --EDSLTSCSWNRDGTKFVCGGI--RGQFYQ--CDIEGQVLDSWEGVRVNCLWCRSDG-KSVLAADTHHRIRTYNFEH-- 462 (604)
Q Consensus 392 --~~~v~~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~-- 462 (604)
......++++|||++++++.. +..+.+ +|... +..+.-.. +..+.|++ ..+++.+.|+.+.+.|+.+
T Consensus 121 ~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~--~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSAS--CFHIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSS--CCCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCC--ceEEccCCCeEEEEEcCCCCEEEEECcccc
Confidence 123568999999999999875 357888 88754 33322110 11123443 3445556777887888776
Q ss_pred ---Ccccc----ccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc--eeeEeeccc-----cceEE--EEeeeC
Q psy10566 463 ---LTDSN----LLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI--LLRKFQGVT-----QGQFT--IHSCFG 525 (604)
Q Consensus 463 ---~~~~~----~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~--~~~~~~~~~-----~~~~~--i~~~~~ 525 (604)
++... .+. ...+. . .+++..++..+. +.|.+.|..+.. .+..+.... ..... ...+.+
T Consensus 197 ~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 197 AAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred ccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 32221 111 22333 3 556666666666 899999986532 222222110 00000 000234
Q ss_pred CCCCcEEEEEeC---------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CCCcEEEECCCCCC
Q psy10566 526 GANQDFVASGSE---------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DDCTVRIWGPHLNT 593 (604)
Q Consensus 526 ~~~~~~l~sgs~---------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~Dg~I~iW~~~~~~ 593 (604)
+++++.++.+.. ++.+.++|..+.+.+..+.... ...+++|+|++..+++++. .+++|.++|+.+.+
T Consensus 272 s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 588887776533 2356699999999988887544 5899999999556788888 69999999998876
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-09 Score=109.79 Aligned_cols=168 Identities=14% Similarity=0.097 Sum_probs=126.8
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcC------------CC--eeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE------------GQ--VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~------------~~--~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
..+..+++++....+++|+.++.+ +|+++ -+ ...... . |..++| +++.++++ .++.|++|
T Consensus 38 ~~~nlLais~~~gll~a~~~~~l~-v~~~~~l~~~~~~~~~~~~~~~~~~lp-~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSKAV-VGELQLLRDHITSDSTPLTFKWEKEIP-D-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEE-EEEHHHHHHHHHSSSCCCCCSEEEECT-T-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCEEE-EEEhhHhhhhhccccccccceEEeeCC-C-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 368999999999999999998644 59862 11 122222 2 999999 99999998 88999999
Q ss_pred EcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 459 NFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 459 d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
|+.+..... ...+..++.++.+.+. .+++++.||.|.+||+.++.... +. ..+++++|+|+| ++.|..
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~---~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LA---QNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EE---ESEEEEEECSSE--EEEEET
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----cc---CCceEEEEcCCc--eEEEEc
Confidence 998765433 2234566777776654 38888999999999999876643 22 246677888999 678999
Q ss_pred CCcEEEEeCCCCcc--eEEe------e---CCCCCeeEEEEcCCCCcEEEEE
Q psy10566 538 DGKVYIWHVKRELP--IATL------S---GHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 538 dg~I~iwd~~~~~~--~~~l------~---~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
||++++|+...+.. ..++ . +|...|.+|.|.++ ..++++-
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~-~~flv~y 231 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP-QDFLAVF 231 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS-SEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC-CeEEEEE
Confidence 99999999887775 5566 2 47889999999998 6777663
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.5e-09 Score=109.00 Aligned_cols=255 Identities=7% Similarity=-0.055 Sum_probs=165.8
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l 353 (604)
.+.+.++.....+ .++|+|||++++++. .+++|.+||.. +.+.+.++.-. ......+
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~----T~~vv~~I~v~~~~~~~~g~~P~~i 129 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV----TFLPIADIELPDAPRFSVGPRVHII 129 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT----TCCEEEEEEETTSCSCCBSCCTTSE
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC----CCCEEEEEECCCccccccCCCcceE
Confidence 4556666555555 799999999888876 36889999998 55555665432 1246789
Q ss_pred EECCCCCeEEEEeCCCceEEEE--EECCCceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC-----Ce
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWV--WNIETELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEG-----QV 425 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~v--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~-----~~ 425 (604)
+++|||++++++.......+.+ +|..+ ...+..+ +. ..+.|++ ..+++.+.||.+.+.|++. ..
T Consensus 130 a~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~--~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 130 GNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA--SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp EECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS--SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred EEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC--Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 9999999999987532126888 99887 3333321 11 1234544 3455566788887777753 11
Q ss_pred ee-----ee--eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--ccccc--------C---CCCeeEEEECCCCC
Q psy10566 426 LD-----SW--EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLLQ--------E---DHPVMSFTIDATDR 485 (604)
Q Consensus 426 ~~-----~~--~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~~--------~---~~~i~~~~~s~~~~ 485 (604)
+. .+ ...+. . .+++..++..+. +.+.+.|..+... ...+. . ......++++|+++
T Consensus 202 v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~ 276 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276 (368)
T ss_dssp CCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred EEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence 11 01 11122 3 666676666666 9999999865321 11110 0 11122378999999
Q ss_pred EEEEEec-C--------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEE
Q psy10566 486 LALLNVS-T--------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 486 ~l~~~~~-d--------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~ 554 (604)
.++++.. . +.+.++|+.+.+.+.++..... ...+.++++|+ .+++.. .++.|.++|+.+++.+.+
T Consensus 277 ~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~----p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 277 GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD----SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE----ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred EEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC----cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEE
Confidence 9888654 2 3577999999999888864432 23345568887 556666 599999999999999999
Q ss_pred eeCCCCCeeEEEEcC
Q psy10566 555 LSGHTRTVSCVAWNP 569 (604)
Q Consensus 555 l~~h~~~V~~v~~sp 569 (604)
+..... ...+++.+
T Consensus 353 I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 353 VELDKG-PESLSVQN 366 (368)
T ss_dssp CCCCSC-CCEEECCC
T ss_pred EECCCC-CCEEEeec
Confidence 986544 46676654
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.10 E-value=4.4e-08 Score=99.48 Aligned_cols=261 Identities=8% Similarity=-0.009 Sum_probs=163.2
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV 385 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~ 385 (604)
+..+++++.++.|..+|..++. ..-...+... ...+.+. ...++..+++++.++ .|..+|..+|+...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g--~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGK--EIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKA--QVYALNTSDGTVAW 127 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCC--EEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTS--EEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCc--eeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCC--EEEEEECCCCCEEE
Confidence 5567777888999999987322 2212222111 1223222 122455777778777 89999999998876
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece-eE------EEEEEcCCCCEEEEEeCCCeEEE
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RV------NCLWCRSDGKSVLAADTHHRIRT 457 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v------~~l~~s~~g~~l~~~~~dg~I~i 457 (604)
....... ....... .+..+++++.++.+..+|. +|+.+...... .+ ..... .+..+++++.++.+..
T Consensus 128 ~~~~~~~-~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 128 QTKVAGE-ALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSA 202 (376)
T ss_dssp EEECSSC-CCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEE
T ss_pred EEeCCCc-eEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEE
Confidence 6553211 1111112 2457888899999999998 57766555432 11 11111 2456888888999999
Q ss_pred EEcCCCcccccccCCCCe-----eE---EEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 458 YNFEHLTDSNLLQEDHPV-----MS---FTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 458 ~d~~~~~~~~~~~~~~~i-----~~---~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+|..+++.........+. .. +...| .+..+++++.++.+..+|..+++.+....... ...+ . .
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~--~~~~---~--~ 275 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS--VNDF---I--V 275 (376)
T ss_dssp EETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC--EEEE---E--E
T ss_pred EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC--CCCc---e--E
Confidence 999887655443321110 00 00111 35678888889999999999998776554221 1111 1 2
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++..++.++.+|.|+.+|..+|+.+..... ....+...... +..|+.++.+|.|.++|..+++
T Consensus 276 ~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 276 DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEETTTCC
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE---CCEEEEEeCCCeEEEEECCCCc
Confidence 356788888999999999999998877652 22233333333 3567788889999999998876
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-08 Score=111.61 Aligned_cols=259 Identities=12% Similarity=0.069 Sum_probs=164.2
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECC---CCCeEEEEeCC----CceEEEEEECCCceE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSP---DSSHLLVVGPE----DCHELWVWNIETELL 383 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~sp---d~~~l~s~~~d----~~~~i~vwd~~~~~~ 383 (604)
+..+++++.|+.|..+|..+ ++.+-.+.. +......+..+| ++ .+++++.. ..+.|+.||..+|+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~T----G~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKT----GQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp TTEEEEECTTSEEEEEETTT----CCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CCEEEEEccCCEEEEEECCC----CCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 55788888999999999983 333333322 111111111222 44 44444321 123899999999998
Q ss_pred EEEecCCCC------------------------------CCeEEEEEecCCCEEEEEecCCe------------------
Q psy10566 384 RVKLNHSPE------------------------------DSLTSCSWNRDGTKFVCGGIRGQ------------------ 415 (604)
Q Consensus 384 ~~~~~~~~~------------------------------~~v~~~~~~~~~~~l~s~~~dg~------------------ 415 (604)
+-.+..... .....++++|++..++.++.++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 776642110 01125788898899999888764
Q ss_pred -EEEEEc-CCCeeeeeec--e---------eEEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCcccccccC--------
Q psy10566 416 -FYQCDI-EGQVLDSWEG--V---------RVNCLWCRSDGK---SVLAADTHHRIRTYNFEHLTDSNLLQE-------- 471 (604)
Q Consensus 416 -i~iwd~-~~~~~~~~~~--~---------~v~~l~~s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~~~~-------- 471 (604)
|..+|. +|+.+-.+.. + .........+|+ .++.++.+|.++++|..+++.......
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 899998 4777655542 1 111122223554 688899999999999988765421100
Q ss_pred --------------------------------CCCeeEEEECCCCCEEEEEec---------------------------
Q psy10566 472 --------------------------------DHPVMSFTIDATDRLALLNVS--------------------------- 492 (604)
Q Consensus 472 --------------------------------~~~i~~~~~s~~~~~l~~~~~--------------------------- 492 (604)
...-..++++|+...+++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 001123788888888887632
Q ss_pred ------------------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE
Q psy10566 493 ------------------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 493 ------------------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~ 554 (604)
+|.|+.||+.+++.+-.+..+...... .....+.+++.|+.||.|+.||.++|+.+..
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g----~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGG----TLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCC----EEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCc----cceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 377999999999988777654321111 1124567899999999999999999999998
Q ss_pred eeCCCCC-eeEEEEcCCCCcEEEEEeC
Q psy10566 555 LSGHTRT-VSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 555 l~~h~~~-V~~v~~sp~~~~~l~s~s~ 580 (604)
+....+. ..-+.|..++..++++.+.
T Consensus 512 ~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 512 QPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred eeCCCCcccCceEEEECCEEEEEEEec
Confidence 8755332 2446777775556665543
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-08 Score=111.85 Aligned_cols=271 Identities=12% Similarity=0.041 Sum_probs=173.9
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC-----------CeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL-----------GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~-----------~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+..+++++.++.|.-+|.. +++.+-.+..... ....+++ ++..+++++.++ .|..+|..+|
T Consensus 77 ~g~vyv~~~~~~v~AlD~~----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg--~l~alD~~tG 148 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTR----TGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDG--RLIALDAATG 148 (677)
T ss_dssp TTEEEEECGGGCEEEEETT----TTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTS--EEEEEETTTC
T ss_pred CCEEEEECCCCeEEEEECC----CCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCC--EEEEEECCCC
Confidence 4456666678888888887 3333333332211 0112222 456788888887 8999999999
Q ss_pred eEEEEecCC-CC---CCeEEEEEecCCCEEEEEec------CCeEEEEEc-CCCeeeeeecee-----------------
Q psy10566 382 LLRVKLNHS-PE---DSLTSCSWNRDGTKFVCGGI------RGQFYQCDI-EGQVLDSWEGVR----------------- 433 (604)
Q Consensus 382 ~~~~~~~~~-~~---~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~-~~~~~~~~~~~~----------------- 433 (604)
+.+..+... .. ..+.+.-.. .+..+++++. ++.|+.+|. +|+.+-.+....
T Consensus 149 ~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~ 227 (677)
T 1kb0_A 149 KEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAAR 227 (677)
T ss_dssp CEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred CEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccc
Confidence 988777643 10 111111111 2345555553 689999998 577765553210
Q ss_pred -----------------EEEEEEcCCCCEEEEEeCCC-------------------eEEEEEcCCCcccccccC------
Q psy10566 434 -----------------VNCLWCRSDGKSVLAADTHH-------------------RIRTYNFEHLTDSNLLQE------ 471 (604)
Q Consensus 434 -----------------v~~l~~s~~g~~l~~~~~dg-------------------~I~i~d~~~~~~~~~~~~------ 471 (604)
...+++++++..++.++.++ .|..+|..+++....+..
T Consensus 228 ~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w 307 (677)
T 1kb0_A 228 TWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW 307 (677)
T ss_dssp TSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred cccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc
Confidence 12467888899898887764 599999998876554332
Q ss_pred ----CCCeeEEEECCCC---CEEEEEecCCeEEEEecCCCceeeEeeccccc-e-------EEE----------------
Q psy10566 472 ----DHPVMSFTIDATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQG-Q-------FTI---------------- 520 (604)
Q Consensus 472 ----~~~i~~~~~s~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~-~-------~~i---------------- 520 (604)
......+....+| ..+++++.+|.++++|..+++.+..+...... . ..+
T Consensus 308 d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P 387 (677)
T 1kb0_A 308 DYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVP 387 (677)
T ss_dssp CCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSS
T ss_pred ccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECc
Confidence 1122233334467 67889999999999999999988665422100 0 000
Q ss_pred --------EeeeCCCCCcEEEEEeC-------------------------------------------CCcEEEEeCCCC
Q psy10566 521 --------HSCFGGANQDFVASGSE-------------------------------------------DGKVYIWHVKRE 549 (604)
Q Consensus 521 --------~~~~~~~~~~~l~sgs~-------------------------------------------dg~I~iwd~~~~ 549 (604)
....++|++.++++... .|.|..||..++
T Consensus 388 ~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG 467 (677)
T 1kb0_A 388 GPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ 467 (677)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT
T ss_pred CcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC
Confidence 01233567777776543 278999999999
Q ss_pred cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 550 LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 550 ~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+.+..+. +..++.+..+... +.+++.++.||.+++||..+++.
T Consensus 468 ~~~W~~~-~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 468 KAAWSVE-HVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEE-ESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCE
T ss_pred cEEeecC-CCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCce
Confidence 9988876 3344555556666 56778889999999999998873
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.6e-08 Score=111.02 Aligned_cols=270 Identities=12% Similarity=0.019 Sum_probs=170.5
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC----------Ce-eEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL----------GV-AYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~----------~V-~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+..+++++.++.|.-+|.. +++.+-.+..+.. .+ ..++. .+..+++++.++ .|..+|..+|
T Consensus 70 ~g~vyv~~~~~~v~AlD~~----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg--~l~AlDa~TG 141 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDAR----DGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDG--RLEAIDAKTG 141 (689)
T ss_dssp TTEEEEECGGGCEEEEETT----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTS--EEEEEETTTC
T ss_pred CCEEEEEcCCCeEEEEECC----CCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCC--EEEEEECCCC
Confidence 4566667778889999987 3333333332211 01 11222 355788888887 8999999999
Q ss_pred eEEEEecCC-CCCCeEEEEEec---CCCEEEEEe------cCCeEEEEEc-CCCeeeeeece------------------
Q psy10566 382 LLRVKLNHS-PEDSLTSCSWNR---DGTKFVCGG------IRGQFYQCDI-EGQVLDSWEGV------------------ 432 (604)
Q Consensus 382 ~~~~~~~~~-~~~~v~~~~~~~---~~~~l~s~~------~dg~i~iwd~-~~~~~~~~~~~------------------ 432 (604)
+.+..+... +......+..+| ++ .+++++ .+|.|..||. +|+.+-.+...
T Consensus 142 ~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 220 (689)
T 1yiq_A 142 QRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAK 220 (689)
T ss_dssp CEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHT
T ss_pred CEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccc
Confidence 988776543 211111111122 44 444443 3689999998 57776555310
Q ss_pred ---------------eEEEEEEcCCCCEEEEEeCCCe-------------------EEEEEcCCCcccccccC-------
Q psy10566 433 ---------------RVNCLWCRSDGKSVLAADTHHR-------------------IRTYNFEHLTDSNLLQE------- 471 (604)
Q Consensus 433 ---------------~v~~l~~s~~g~~l~~~~~dg~-------------------I~i~d~~~~~~~~~~~~------- 471 (604)
....+++++++..+++++.++. |..+|..+++.......
T Consensus 221 ~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 221 TWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD 300 (689)
T ss_dssp TCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC
T ss_pred ccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc
Confidence 0124678888899999888764 99999999876654432
Q ss_pred ---CCCeeEEEECCCCC---EEEEEecCCeEEEEecCCCceeeEeecccc-ceE------------------------EE
Q psy10566 472 ---DHPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQF------------------------TI 520 (604)
Q Consensus 472 ---~~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~------------------------~i 520 (604)
..+.....+..+|+ .++.++.+|.++++|.++|+.+........ ... .+
T Consensus 301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~ 380 (689)
T 1yiq_A 301 YTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNL 380 (689)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEE
T ss_pred ccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeE
Confidence 11222223333554 788899999999999999988743321110 000 00
Q ss_pred E-----------eeeCCCCCcEEEEEeC---------------------------------------------CCcEEEE
Q psy10566 521 H-----------SCFGGANQDFVASGSE---------------------------------------------DGKVYIW 544 (604)
Q Consensus 521 ~-----------~~~~~~~~~~l~sgs~---------------------------------------------dg~I~iw 544 (604)
. .+.++|+..++++.+. +|.|+.|
T Consensus 381 ~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~ 460 (689)
T 1yiq_A 381 VTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAW 460 (689)
T ss_dssp ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEE
T ss_pred eCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEE
Confidence 0 0233466666665532 3789999
Q ss_pred eCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 545 HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|..+|+.+..+..+.. +..-.+... +.+++.++.||.|+.||.++++
T Consensus 461 D~~tG~~~W~~~~~~~-~~~g~~~ta-gglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 461 DPVKQQAAWEVPYVTI-FNGGTLSTA-GNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp ETTTTEEEEEEEESSS-CCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred ECCCCCeEeEccCCCC-ccCccceEC-CCEEEEECCCCcEEEEECCCCc
Confidence 9999999988875543 333355555 6788899999999999999987
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-10 Score=116.64 Aligned_cols=199 Identities=13% Similarity=0.096 Sum_probs=117.6
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece---e
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV---R 433 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~---~ 433 (604)
++..+++++.++ .|+.||..+|+.+..+.. ..+.+..+..++..+++++.||.|+.||. +|+.+..+... .
T Consensus 8 ~~~~v~~gs~dg--~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDG--SLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTS--EEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCC--EEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 467888999888 899999999998877763 34555556677888888899999999999 57665555432 1
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~ 513 (604)
+.+.-+..++..+++++.++.++.||..+++......... ...++|++..+++++.++.|+.||.++++.+..+...
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 1000011135567888889999999999887765554332 2345668889999999999999999999887666532
Q ss_pred ccceEEEEeeeCCCCC---cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee-EEEEcCC
Q psy10566 514 TQGQFTIHSCFGGANQ---DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS-CVAWNPV 570 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~-~v~~sp~ 570 (604)
. ........+. ..+++++.||.|+.||..+|+.+...... .++. ...++++
T Consensus 160 ~-----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~d 214 (369)
T 2hz6_A 160 D-----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQRE 214 (369)
T ss_dssp E-----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTS
T ss_pred c-----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCC
Confidence 1 1112222221 45777889999999999999998887643 4443 3455555
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=5e-07 Score=86.78 Aligned_cols=249 Identities=10% Similarity=0.012 Sum_probs=156.8
Q ss_pred CeEEEEECCCeEEEEEeCCCCcee-EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTC-QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~-~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
.+|..+. .+.|+.++++...... .....+......+..++|++++..|..+.... +.|..++..++....... ...
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~-~~I~~~~~~g~~~~~~~~-~~~ 78 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISE-PSIGRASLHGGEPTTIIR-QDL 78 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTT-TEEEEEESSSCCCEEEEC-TTC
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCC-CEEEEEecCCCCcEEEEE-CCC
Confidence 4455554 3478888887322110 00111111223578999999877777666543 389999998765433332 222
Q ss_pred CCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCeeeeee--c-eeEEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCcc
Q psy10566 393 DSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEGQVLDSWE--G-VRVNCLWCRSDGKSVLAADT---HHRIRTYNFEHLTD 465 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~--~-~~v~~l~~s~~g~~l~~~~~---dg~I~i~d~~~~~~ 465 (604)
.....+++++++..++.+ ...+.|.++++++.....+. + .....++++|++..++.+.. .+.|..++......
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 467899999976655544 55679999999875443332 2 35789999997776666654 36898888865433
Q ss_pred cccc-cCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 466 SNLL-QEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 466 ~~~~-~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
.... ........+++++++..++++. ..+.|.++|+........+.+. .....+. . .++.++++....+.|.+
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~---~-d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVT---S-YGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEE---E-ETTEEEEEETTTTEEEE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-CCceEEE---E-eCCEEEEEECCCCeEEE
Confidence 2222 2234578899999877666555 4678999999765433333321 1222332 1 23445555556789999
Q ss_pred EeCCCCcceEEeeCCC-CCeeEEEEcCC
Q psy10566 544 WHVKRELPIATLSGHT-RTVSCVAWNPV 570 (604)
Q Consensus 544 wd~~~~~~~~~l~~h~-~~V~~v~~sp~ 570 (604)
+|..+++.+.++.... .....+++.|+
T Consensus 234 ~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 234 MDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EeCCCCCceEEEccccccccceeeecCc
Confidence 9999999888886443 24788888887
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7.8e-08 Score=97.60 Aligned_cols=257 Identities=12% Similarity=0.022 Sum_probs=161.7
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
++..++.++.++.|..+|..+ ++.................. +..+++++.++ .+..+|..+|+.........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~t----G~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g--~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSD----GTVAWQTKVAGEALSRPVVS--DGLVLIHTSNG--QLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTT----CCEEEEEECSSCCCSCCEEE--TTEEEEECTTS--EEEEEETTTCCEEEEEECCC
T ss_pred eCCEEEEEcCCCEEEEEECCC----CCEEEEEeCCCceEcCCEEE--CCEEEEEcCCC--eEEEEECCCCcEEEEEeCCC
Confidence 345677788899999999872 23333333222111111222 44677777777 89999999998877665321
Q ss_pred CCC----eEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeecee---------EEEEEEcC--CCCEEEEEeCCCeE
Q psy10566 392 EDS----LTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVR---------VNCLWCRS--DGKSVLAADTHHRI 455 (604)
Q Consensus 392 ~~~----v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~---------v~~l~~s~--~g~~l~~~~~dg~I 455 (604)
... ...... .+..+++++.++.+..+|. +|+.+....... +..+...| .+..+++++.++.+
T Consensus 174 ~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 174 PSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL 251 (376)
T ss_dssp -----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred CceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence 110 011122 2457888888999999998 577665543211 00011111 35678888889999
Q ss_pred EEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 456 RTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
..+|..+++....... .....+.. ++..+++++.++.+..+|..+++.+............ ... ..+..|+.+
T Consensus 252 ~~~d~~tG~~~w~~~~-~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~--~~~--~~~~~l~v~ 324 (376)
T 3q7m_A 252 TALDLRSGQIMWKREL-GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT--SPV--LYNGNLVVG 324 (376)
T ss_dssp EEEETTTCCEEEEECC-CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC--CCE--EETTEEEEE
T ss_pred EEEECCCCcEEeeccC-CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc--CCE--EECCEEEEE
Confidence 9999988765544332 22334443 4678888889999999999999887665522111100 011 124578889
Q ss_pred eCCCcEEEEeCCCCcceEEeeCCCCCeeE-EEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGHTRTVSC-VAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~-v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+.+|.|+++|..+|+.+.........+.+ .... +..|+.++.||.|..|+
T Consensus 325 ~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~---~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 325 DSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA---DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE---TTEEEEEBTTSCEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEecCCCcceeCCEEE---CCEEEEEeCCCEEEEEe
Confidence 99999999999999998887764333332 2222 34677788999999886
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=3e-08 Score=108.60 Aligned_cols=269 Identities=13% Similarity=0.043 Sum_probs=172.1
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-C----CCeeE-EEECCCCCeEEEEeCC----CceEEEEEECCCc
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-T----LGVAY-LAWSPDSSHLLVVGPE----DCHELWVWNIETE 381 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~----~~V~~-l~~spd~~~l~s~~~d----~~~~i~vwd~~~~ 381 (604)
++..++.++.|+.|..+|.. +++.+-.+..+ . ..+.+ ... .+..+++++.. ..+.|+.||..+|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~----tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAA----TGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp ETTEEEEECTTSEEEEEETT----TCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred ECCEEEEEcCCCEEEEEECC----CCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCC
Confidence 35678888889999999988 33344444332 1 11111 111 23455555432 0138999999999
Q ss_pred eEEEEecCCCCC-------------------------------CeEEEEEecCCCEEEEEecCC----------------
Q psy10566 382 LLRVKLNHSPED-------------------------------SLTSCSWNRDGTKFVCGGIRG---------------- 414 (604)
Q Consensus 382 ~~~~~~~~~~~~-------------------------------~v~~~~~~~~~~~l~s~~~dg---------------- 414 (604)
+.+..+...... ....++++|++..++.++.++
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCe
Confidence 988766532111 113578889999998887664
Q ss_pred ---eEEEEEc-CCCeeeeeec--e---------eEEEEEEcCCC---CEEEEEeCCCeEEEEEcCCCcccccccCC----
Q psy10566 415 ---QFYQCDI-EGQVLDSWEG--V---------RVNCLWCRSDG---KSVLAADTHHRIRTYNFEHLTDSNLLQED---- 472 (604)
Q Consensus 415 ---~i~iwd~-~~~~~~~~~~--~---------~v~~l~~s~~g---~~l~~~~~dg~I~i~d~~~~~~~~~~~~~---- 472 (604)
.|..+|. +|+..-.+.. + ....+....+| ..++.++.+|.++++|..+++........
T Consensus 281 ~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 281 YLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW 360 (677)
T ss_dssp TTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCc
Confidence 4888888 4776655432 1 12222333467 67889999999999999887654322210
Q ss_pred --------CC------------------------eeEEEECCCCCEEEEEecC---------------------------
Q psy10566 473 --------HP------------------------VMSFTIDATDRLALLNVST--------------------------- 493 (604)
Q Consensus 473 --------~~------------------------i~~~~~s~~~~~l~~~~~d--------------------------- 493 (604)
.+ -..++++|++..+++...+
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccc
Confidence 00 1256889998888886542
Q ss_pred ----------------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 494 ----------------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 494 ----------------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
+.|..||+.+++.+-.+...... .. ......+..++.++.||.+++||.++|+.+..+..
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~-~~---g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW-NG---GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC-CC---CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC-cC---cceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 77999999999988776533211 11 11124567888899999999999999999999874
Q ss_pred CC-CCeeEEEEcCCCCcEEEEEeC----------------CCcEEEECCC
Q psy10566 558 HT-RTVSCVAWNPVYHQMIASVSD----------------DCTVRIWGPH 590 (604)
Q Consensus 558 h~-~~V~~v~~sp~~~~~l~s~s~----------------Dg~I~iW~~~ 590 (604)
.. ....-+.|.+++..+++..+. .+.+.+|.+.
T Consensus 517 ~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 517 GTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp SSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred CCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 43 223446677774455555433 3677788776
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-07 Score=95.08 Aligned_cols=227 Identities=13% Similarity=0.010 Sum_probs=146.9
Q ss_pred Ec--CCCCeEEE-EECCCeEEEEEeCCCCceeEeeEEec-------cCCCCeeEEEECCCCCeEEEEeCC----CceEEE
Q psy10566 309 FS--PDGLKLAT-GSKDTTVIIWDVDPVTFTCQHRKTLE-------GHTLGVAYLAWSPDSSHLLVVGPE----DCHELW 374 (604)
Q Consensus 309 fs--pdg~~las-gs~dg~i~iwd~~~~~~~~~~~~~l~-------~h~~~V~~l~~spd~~~l~s~~~d----~~~~i~ 374 (604)
++ +++++|+. |..+++|.|+|+.+.....+..+++. ........+..+|+| .++++..+ +.+.|.
T Consensus 89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 36 78886655 55778899999974434456666663 111245667889999 66666554 113799
Q ss_pred EEECCCceEEEEecCCCC--CCeEEEEEecCCCEEEEEe-------------------cCCeEEEEEcC-CCeeeeeec-
Q psy10566 375 VWNIETELLRVKLNHSPE--DSLTSCSWNRDGTKFVCGG-------------------IRGQFYQCDIE-GQVLDSWEG- 431 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~-------------------~dg~i~iwd~~-~~~~~~~~~- 431 (604)
++|..+++.+.++..+.. ..-..+.|+|+++.+++.. .+.+|.+||++ ++.+..+.-
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 999999999888863311 2245688999999888885 36899999995 444555443
Q ss_pred ---eeEEEEEE--cCCCCEEEEEeC------CCeEEEEEcCCC-------------ccccccc--------CCCCeeEEE
Q psy10566 432 ---VRVNCLWC--RSDGKSVLAADT------HHRIRTYNFEHL-------------TDSNLLQ--------EDHPVMSFT 479 (604)
Q Consensus 432 ---~~v~~l~~--s~~g~~l~~~~~------dg~I~i~d~~~~-------------~~~~~~~--------~~~~i~~~~ 479 (604)
.....+.| +|+++++++++. +++|.+|....+ +....+. .......+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 23445555 999999888774 557766554322 1111010 024578899
Q ss_pred ECCCCCEEEEEec-CCeEEEEecCCC---ceeeEeecccc--------ce---EEEEeeeCCCCCcEEEEEe
Q psy10566 480 IDATDRLALLNVS-TQGVHLWDLRDR---ILLRKFQGVTQ--------GQ---FTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 480 ~s~~~~~l~~~~~-dg~I~lwd~~~~---~~~~~~~~~~~--------~~---~~i~~~~~~~~~~~l~sgs 536 (604)
+++||++|+++.. .+.|.+||+... +.+..+..... +. ..-+.+..+++|++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999998877 678999998632 34444332100 00 0012234479999999887
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.98 E-value=2e-08 Score=100.72 Aligned_cols=227 Identities=13% Similarity=0.048 Sum_probs=143.3
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEEC-----CCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEECCCCCeEEEEe
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSK-----DTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~-----dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~spd~~~l~s~~ 366 (604)
.+|-..+.+++|+++|+++++-.. ++.|.+||+. +.+....+.. +...+..++++|++..+..+.
T Consensus 63 ~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~----tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd 138 (343)
T 2qe8_A 63 IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL----NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD 138 (343)
T ss_dssp CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT----TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE
T ss_pred ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC----CCeEEEEEECChhhcccccccceEEEecCCCEEEEEc
Confidence 356778999999999986665543 5789999987 2233333321 234568999998755554443
Q ss_pred ----CCCceEEEEEECCCceEEEEecCCCCCC-eEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcC
Q psy10566 367 ----PEDCHELWVWNIETELLRVKLNHSPEDS-LTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRS 441 (604)
Q Consensus 367 ----~d~~~~i~vwd~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~ 441 (604)
.++ .|.+||..+++....+. .|... .....+.++|..+.+.+.++.+..|. ..+..++++|
T Consensus 139 ~~~~~~~--~i~v~d~~~g~~~r~~~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-----------~~~~gia~s~ 204 (343)
T 2qe8_A 139 PAPDDKA--ALIRVDLQTGLAARVLQ-GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH-----------LGVNGIVLDA 204 (343)
T ss_dssp CCSGGGC--EEEEEETTTCCEEEECT-TCTTTSCCSCCCEETTEECBEECTTSCEECCC-----------CCEEEEEECT
T ss_pred CccCCCC--eEEEEECCCCCEEEEec-CCCcccccccceeECCEEEEeccCCCceecee-----------cccceeEecc
Confidence 334 89999999888766553 22111 00144556777777777777765553 2357799999
Q ss_pred CCCEEEEEeCCC-eEEEEEcCCCcc-----------cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 442 DGKSVLAADTHH-RIRTYNFEHLTD-----------SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 442 ~g~~l~~~~~dg-~I~i~d~~~~~~-----------~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
+|+.++++...+ .+..++...... ............++++++|.++++...++.|.+||..+++....
T Consensus 205 dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~ 284 (343)
T 2qe8_A 205 ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLL 284 (343)
T ss_dssp TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEE
Confidence 999888887766 565555421110 01112234567899999999999888899999999856654333
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
.... ... ....+++.+++.++++.+..+.+.+|
T Consensus 285 ~~~~-~~~-~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 285 VTDE-KLS-WTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EECG-GGS-CEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred EECC-cee-cCCeeEECCCCcEEEEeCcccccccc
Confidence 3221 111 22334445778777777655544444
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.96 E-value=6.7e-07 Score=90.21 Aligned_cols=222 Identities=11% Similarity=0.134 Sum_probs=144.6
Q ss_pred EC--CCCCeEEEEeCCCceEEEEEECCCc----eEEEEec------CCCCCCeEEEEEecCCCEEEEEecC------CeE
Q psy10566 355 WS--PDSSHLLVVGPEDCHELWVWNIETE----LLRVKLN------HSPEDSLTSCSWNRDGTKFVCGGIR------GQF 416 (604)
Q Consensus 355 ~s--pd~~~l~s~~~d~~~~i~vwd~~~~----~~~~~~~------~~~~~~v~~~~~~~~~~~l~s~~~d------g~i 416 (604)
++ +++++|++.+... .+|.++|+.+. +....+. .........+...|+| .++++..+ |.|
T Consensus 89 ~~~~~~r~~l~v~~l~s-~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRS-SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCTTCCSCEEEEEBTTT-CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred cCCCccCCEEEEccCCC-CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 36 8888888877765 48999999765 5555442 0111245667888999 77766555 789
Q ss_pred EEEEcC-CCeeeeeece-----eEEEEEEcCCCCEEEEEe-------------------CCCeEEEEEcCCCcccccccC
Q psy10566 417 YQCDIE-GQVLDSWEGV-----RVNCLWCRSDGKSVLAAD-------------------THHRIRTYNFEHLTDSNLLQE 471 (604)
Q Consensus 417 ~iwd~~-~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~-------------------~dg~I~i~d~~~~~~~~~~~~ 471 (604)
.++|.. .+.+..+... -...++++|+++.+++.. ...+|.+||+.+.+....+..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 999985 7778877632 234588999999888875 368999999998765554443
Q ss_pred C---CCeeEEEE--CCCCCEEEEEec------CCeEEEEecCCCce--eeEe--eccc---------c---c-eEEEEee
Q psy10566 472 D---HPVMSFTI--DATDRLALLNVS------TQGVHLWDLRDRIL--LRKF--QGVT---------Q---G-QFTIHSC 523 (604)
Q Consensus 472 ~---~~i~~~~~--s~~~~~l~~~~~------dg~I~lwd~~~~~~--~~~~--~~~~---------~---~-~~~i~~~ 523 (604)
. .....+.| +|+++++++++. +++|.+|....+.. .+.+ .... . . ......+
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 2 23334444 999999988875 55787766554321 1111 0000 0 0 0112334
Q ss_pred eCCCCCcEEEEEeC-CCcEEEEeCCC---CcceEEeeCCC--------------CCeeEEEEcCCCCcEEEEEe
Q psy10566 524 FGGANQDFVASGSE-DGKVYIWHVKR---ELPIATLSGHT--------------RTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 524 ~~~~~~~~l~sgs~-dg~I~iwd~~~---~~~~~~l~~h~--------------~~V~~v~~sp~~~~~l~s~s 579 (604)
..++||++|+++.. .+.|.+||+.. .+.+..+.... +....++++|+ +++|+.+.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD-Gk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD-GRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT-SSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC-CCEEEEEc
Confidence 55799999988876 68999999863 34454443220 13588999999 55555555
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=4e-10 Score=114.28 Aligned_cols=258 Identities=8% Similarity=-0.095 Sum_probs=137.0
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
++..+++++.||.|+.||.. +++.+..+.. ..+.+..+..++..+++++.++ .|+.||..+|+.+.......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~----tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg--~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR----TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDG--SLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT----TCCEEEEEEC--CCSCCCC-----CCEEECTTTC--CEEEC-----CCSEECSCCH
T ss_pred eCCEEEEEcCCCEEEEEECC----CCCEEEEecC--CCceecceEcCCCEEEEeCCCC--EEEEEECCCCceeeeeeccC
Confidence 56789999999999999988 3444444444 4555556667787777777787 89999999988665544211
Q ss_pred CCCeEE-EEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc
Q psy10566 392 EDSLTS-CSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 392 ~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~ 469 (604)
...+.+ ..+ ..+..+++++.++.++.||.. |+.+..+.... ...++|++..+++++.++.|+.||..+++.....
T Consensus 80 ~~~~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 80 PELVQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccccccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 111100 011 134567888899999999984 77765554432 2345668889999999999999999988765443
Q ss_pred cCCCCeeEEEECCCC---CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE----EEEeCCCcEE
Q psy10566 470 QEDHPVMSFTIDATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV----ASGSEDGKVY 542 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l----~sgs~dg~I~ 542 (604)
... .....+++.+. ..+++++.+|.|+.||.++++.+-.+.... .. +.....+.+|... +.+ ++.++
T Consensus 157 ~~~-~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-pv--~~~~~~~~dg~~~v~~~~~~--~~~l~ 230 (369)
T 2hz6_A 157 TYF-DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS-PV--VAFYVWQREGLRKVMHINVA--VETLR 230 (369)
T ss_dssp EEE-EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS-CE--EEEEECTTSSCEEECCEEEE--HHHHH
T ss_pred ecc-cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC-ce--EEEEEecCCceEeccceeec--cccee
Confidence 211 11223333332 567788899999999999998877665322 22 1222334555322 122 34566
Q ss_pred EEeCCCCc----ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 543 IWHVKREL----PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 543 iwd~~~~~----~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.+|..+|+ .+..+... +.+.+... . +..++.++.||.+..++..
T Consensus 231 ~ld~~tG~~~~~~~W~~~~~-~~~~sp~~--~-~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 231 YLTFMSGEVGRITKWKYPFP-KETEAKSK--L-TPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHHHHTSCCCCC-CHHHHHHH--S-EEEECBEECSSCEECCEEE
T ss_pred eeehhcCCcccceeeeeccC-cccccccc--c-cceEEEecccCCEEecCcc
Confidence 66666665 43333211 11110001 1 3466677778888777765
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-07 Score=89.70 Aligned_cols=208 Identities=12% Similarity=0.025 Sum_probs=141.5
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEc-CCCeeeeeec---eeEEEEEEcCCCCEEEEE-eCCCe
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDI-EGQVLDSWEG---VRVNCLWCRSDGKSVLAA-DTHHR 454 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~-~~~~~~~~~~---~~v~~l~~s~~g~~l~~~-~~dg~ 454 (604)
+.+..+..........++|++++..+++.+. ++.|.++|+ +++.+....- .....+++. ++.++.+ -.++.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 3455555333344689999998755555443 579999999 5777766542 123344444 4455444 45789
Q ss_pred EEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEE
Q psy10566 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFV 532 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l 532 (604)
+.++|..+.+....+... ......++++++.++++..++.|.++|..+.+.+..+.-.... ...+.-+.+. +|...
T Consensus 88 v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ly 165 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVW 165 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEE
Confidence 999999988766655433 1122445668888888778899999999999888877643221 1111122222 56555
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCC-------------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGH-------------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h-------------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+....++.|.+.|..+++.+..+... ....+.++|+|++..+++++...++|.+-++....
T Consensus 166 vn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 55556889999999999999888642 13568999999977889999899999988886654
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.94 E-value=7.3e-08 Score=100.63 Aligned_cols=230 Identities=9% Similarity=0.051 Sum_probs=153.8
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEE-e-cCCCEEEEEe------------------cCCeEE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW-N-RDGTKFVCGG------------------IRGQFY 417 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~s~~------------------~dg~i~ 417 (604)
||++++.+..++ .+|.+.|+.+.++...+..........+++ + |+++++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~-~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKAN-TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTT-TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCC-CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 889998887776 489999999999877444333456888898 5 8999999885 345788
Q ss_pred EEEcCC-Ceeeeee-ceeEEEEEEcCCCCEEEEEeCCC--------------------------------------eEEE
Q psy10566 418 QCDIEG-QVLDSWE-GVRVNCLWCRSDGKSVLAADTHH--------------------------------------RIRT 457 (604)
Q Consensus 418 iwd~~~-~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg--------------------------------------~I~i 457 (604)
+.|.+. +....+. +.....++++|+|+++++.+.+. .|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 888864 3333332 12446688999999999888553 3666
Q ss_pred EEcCC--Ccc-cccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCc------------eeeEeeccccceEEEE
Q psy10566 458 YNFEH--LTD-SNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRI------------LLRKFQGVTQGQFTIH 521 (604)
Q Consensus 458 ~d~~~--~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~------------~~~~~~~~~~~~~~i~ 521 (604)
.|..+ ... ...+.......++.++|||++++++.. +++|.++|+.+.+ .+.....-.. ...
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g---P~h 335 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG---PLH 335 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC---EEE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC---cce
Confidence 66665 222 233444556778999999999888764 7789999998653 2222221111 223
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCC----------CcceEEeeCCCCCe-----eEEEEcCCCCcEEEEEeC---CCc
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKR----------ELPIATLSGHTRTV-----SCVAWNPVYHQMIASVSD---DCT 583 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~----------~~~~~~l~~h~~~V-----~~v~~sp~~~~~l~s~s~---Dg~ 583 (604)
..++++|...++..-|+.|.+||+.+ .+.+.++..|..+- .++..+|| +++|+++.. |+.
T Consensus 336 -~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~D-Gk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 336 -TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT-NDWLVCLSKFSKDRF 413 (595)
T ss_dssp -EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC-SSEEEEEESCCTTSS
T ss_pred -EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCC-CCEEEEcCCCCcccc
Confidence 44568994445555699999999987 56677777765432 22345898 666666543 332
Q ss_pred E----------EEECCCCCC
Q psy10566 584 V----------RIWGPHLNT 593 (604)
Q Consensus 584 I----------~iW~~~~~~ 593 (604)
+ .++|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 1 778885544
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.7e-08 Score=98.82 Aligned_cols=268 Identities=13% Similarity=0.042 Sum_probs=162.9
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
.+...+.++...++|.+++ ++.+ |..+|.. +. ....+...........+. +..+.+++.++ .+..+|.
T Consensus 57 ~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~~---g~--~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~--~l~~~d~ 124 (330)
T 3hxj_A 57 SGEIIECRPSIGKDGTIYF-GSDK--VYAINPD---GT--EKWRFDTKKAIVSDFTIF--EDILYVTSMDG--HLYAINT 124 (330)
T ss_dssp GGGEEEECCEETTTTEECC-SSCE--EEEECCC---GG--GGGGSCC-----CCEEEE--TTEEEEECTTS--EEEEECT
T ss_pred cCCCcccceEEecCCcEEE-ecCc--EEEECCC---Cc--EEEEEECCCCcccCceEE--CCEEEEEecCC--EEEEEcC
Confidence 3445567788887876444 4434 7777742 11 111111111122222333 44677777676 7999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec--eeEEEEEEcCCCCEEEEEeCCCeEE
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIR 456 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~v~~l~~s~~g~~l~~~~~dg~I~ 456 (604)
. ++....... ....+.++...+++. +..++.++.+..+|..++....+.. ..+.++...+++... +++ +.|.
T Consensus 125 ~-g~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~ 198 (330)
T 3hxj_A 125 D-GTEKWRFKT-KKAIYATPIVSEDGT-IYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVY 198 (330)
T ss_dssp T-SCEEEEEEC-SSCCCSCCEECTTSC-EEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEE
T ss_pred C-CCEEEEEcC-CCceeeeeEEcCCCE-EEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEE
Confidence 8 766555442 233455666666665 6667788999999998766555442 345666777777744 444 8899
Q ss_pred EEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 457 TYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 457 i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
.+| .++...... .....+.++..++++. +.+++.++.+..+|. ++..+..+........ .....+++ .|..+
T Consensus 199 ~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~---~~~~~~~g-~l~v~ 271 (330)
T 3hxj_A 199 AIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIES---SPVIGNTD-TIYFG 271 (330)
T ss_dssp EEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCS---CCEECTTS-CEEEE
T ss_pred EEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccc---cceEcCCC-eEEEe
Confidence 999 554333222 2345577888888775 566777888999984 5555555543322111 12222344 57778
Q ss_pred eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+.+|.|+.+|. +++.+..+......+.++...++ +. |..++.+|.+++........
T Consensus 272 t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~-g~-l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 272 SYDGHLYAINP-DGTEKWNFETGSWIIATPVIDEN-GT-IYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp CTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTT-CC-EEEECTTSCEEEEEC-----
T ss_pred cCCCCEEEECC-CCcEEEEEEcCCccccceEEcCC-CE-EEEEcCCCeEEEEecccccc
Confidence 88989999996 67777777666667788888776 44 55688899999987765543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=9.7e-07 Score=87.39 Aligned_cols=237 Identities=10% Similarity=0.008 Sum_probs=150.5
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec-CC-----------------CCCCeEEEEEecCCCEEEE
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HS-----------------PEDSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~-~~-----------------~~~~v~~~~~~~~~~~l~s 409 (604)
....+++|.++++.++++..++ .|..||..++....... .. ....+..+++.++...|++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDG--RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTS--EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCC--eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 4567889999998777777776 79999988765432211 00 0124788999983345555
Q ss_pred EecCCeEEEEEcCCCeeeeee----c---eeEEEEEEcC-CCCEEEEEeC-----------------CCeEEEEEcCCCc
Q psy10566 410 GGIRGQFYQCDIEGQVLDSWE----G---VRVNCLWCRS-DGKSVLAADT-----------------HHRIRTYNFEHLT 464 (604)
Q Consensus 410 ~~~dg~i~iwd~~~~~~~~~~----~---~~v~~l~~s~-~g~~l~~~~~-----------------dg~I~i~d~~~~~ 464 (604)
+...+.+..+|.++..+..+. + .....+++.+ +|+..++... ++.|..||..+..
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 555566888888654333332 1 2478899999 8986665432 3678888877655
Q ss_pred ccccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCc--eeeEeeccccceEEEEeeeCCCCCcEEEEEeC----
Q psy10566 465 DSNLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRI--LLRKFQGVTQGQFTIHSCFGGANQDFVASGSE---- 537 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~---- 537 (604)
.............++++++++.++++ +..+.|..|++.... ....+..... . ..+...++|++.++...
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P---~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-P---GNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-E---EEEEECTTSCEEEEEEEETTS
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-C---CCeEECCCCCEEEEecCcccc
Confidence 43333333445679999999877666 556899999987532 1122211111 1 22344678887666544
Q ss_pred ------CCcEEEEeCCCCcceEEeeCCC----CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 538 ------DGKVYIWHVKRELPIATLSGHT----RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 538 ------dg~I~iwd~~~~~~~~~l~~h~----~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+.|..+|.. ++.+..+.... ..++++++. + +.++++...++.|.++++....
T Consensus 253 ~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp STTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECSSCSEEEEEEC----
T ss_pred cccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-C-CEEEEeecCCCceEEEeccccc
Confidence 4678888864 77777776442 357777774 4 6777777778899999987544
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.90 E-value=5.2e-07 Score=94.24 Aligned_cols=233 Identities=13% Similarity=0.050 Sum_probs=159.2
Q ss_pred CCCCeEEEEEC-CCeEEEEEeCCCCceeEeeE--EeccCCCCeeEEEE-C-CCCCeEEEEeCC----------------C
Q psy10566 311 PDGLKLATGSK-DTTVIIWDVDPVTFTCQHRK--TLEGHTLGVAYLAW-S-PDSSHLLVVGPE----------------D 369 (604)
Q Consensus 311 pdg~~lasgs~-dg~i~iwd~~~~~~~~~~~~--~l~~h~~~V~~l~~-s-pd~~~l~s~~~d----------------~ 369 (604)
+||+++..... ++.|.+.|++ +.+... .+.. ...+..+++ + |+++++++++.. .
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~----t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCD----VMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETT----TTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred cCCCEEEEEcCCCCEEEEEECC----CceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 48887776654 5579999998 444444 4432 245888898 5 999999988522 1
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----------------------------------
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG----------------------------------- 414 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----------------------------------- 414 (604)
.+.+.++|.++.+...++..+. ....++++|+|+++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred CceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 2379999999998888877432 356788999999999988553
Q ss_pred ---eEEEEEcCC---Ce-eeee-eceeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCc------------ccccccCCC
Q psy10566 415 ---QFYQCDIEG---QV-LDSW-EGVRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLT------------DSNLLQEDH 473 (604)
Q Consensus 415 ---~i~iwd~~~---~~-~~~~-~~~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~------------~~~~~~~~~ 473 (604)
.|.+.|... +. +..+ .+....++.++|||+++++++ .+.+|.++|+.+.+ .........
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 245555532 22 2222 223567899999999887776 46789999998653 122333456
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCC----------CceeeEeeccccceEEEE--eeeCCCCCcEEEEEeC---C
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRD----------RILLRKFQGVTQGQFTIH--SCFGGANQDFVASGSE---D 538 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~----------~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~sgs~---d 538 (604)
....++|+++|...++...++.|.+||+.+ ...+.++..+-+...... ....++||++|++... |
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 788999999995455666799999999987 456666665544221111 1245799999998864 3
Q ss_pred Cc----------EEEEeCCCCc
Q psy10566 539 GK----------VYIWHVKREL 550 (604)
Q Consensus 539 g~----------I~iwd~~~~~ 550 (604)
.. -.++|+..++
T Consensus 412 r~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 412 RFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp SSCCCCSSCCEEEEEEECSSSS
T ss_pred ccccCCCCCCCcceEEEcCCCc
Confidence 32 1789996554
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=5.4e-06 Score=92.89 Aligned_cols=275 Identities=11% Similarity=0.102 Sum_probs=174.6
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL 383 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~ 383 (604)
|.++...++|.+.+ |+.++-|..|+... ........ ..+...|.++...+++...+....+| +..||..++..
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~--~~~~~~~~-~~~~~~i~~i~~d~~g~lwigt~~~G---l~~~~~~~~~~ 247 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQ--KTFEKVIP-ILGTKQIQAILQQSPTRIWVATEGAG---LFLINPKTKEI 247 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTT--CCEEECC-----CCCEEEEEEEETTEEEEEEBSSC---EEEEETTTTEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCC--CeEEEecC-CCCCCeeEEEEEcCCCCEEEEECCCC---eEEEeCCCCeE
Confidence 88888888887555 55554588888762 22221111 11345788998888876655544455 99999988765
Q ss_pred EEEecC------CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee----------ceeEEEEEEcCCCCEEE
Q psy10566 384 RVKLNH------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE----------GVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 384 ~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----------~~~v~~l~~s~~g~~l~ 447 (604)
...... -....|.++...++|...+ |+.+ -|.+||........+. ...|.++...++|. +.
T Consensus 248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lW 324 (795)
T 4a2l_A 248 KNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MW 324 (795)
T ss_dssp EEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EE
T ss_pred EEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EE
Confidence 443221 1235689998888877554 4445 5888898655554432 23689999999887 55
Q ss_pred EEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc---c--c
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV---T--Q 515 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~---~--~ 515 (604)
.|+.++-|..|+..+........ ....|.++..+++|. +.+|+.++.|..||..++......... . -
T Consensus 325 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CC
T ss_pred EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 67777788889876543222111 245688999988876 556777777999998876543322111 0 0
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee----CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS----GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~----~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
....+.+++..++++.|..|+.++-|.+||..+++...... .+...|.++...++ +.+.+.. .+| |.+|+..+
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt-~~G-l~~~~~~~ 480 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE-GNLWLGT-LSA-LVRFNPEQ 480 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS-SCEEEEE-SSC-EEEEETTT
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC-CCEEEEe-cCc-eeEEeCCC
Confidence 11134444445677757778887789999998876433221 13457999998887 5555443 444 88888765
Q ss_pred C
Q psy10566 592 N 592 (604)
Q Consensus 592 ~ 592 (604)
+
T Consensus 481 ~ 481 (795)
T 4a2l_A 481 R 481 (795)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-06 Score=86.54 Aligned_cols=239 Identities=13% Similarity=-0.013 Sum_probs=146.5
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-----------------cCCCCeeEEEECC-CCCeEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----------------GHTLGVAYLAWSP-DSSHLL 363 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----------------~h~~~V~~l~~sp-d~~~l~ 363 (604)
....+++|+++|+++.++..++.|..|+.. ........... .....+..+++.+ ++ .|+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~ 95 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGP--NSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLY 95 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCT--TTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCC--CCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEE
Confidence 345678999999978888889999999876 22222111100 0113578899998 55 455
Q ss_pred EEeCCCceEEEEEECCCceEEEEec--C-CCCCCeEEEEEec-CCCEEEEEec-----------------CCeEEEEEcC
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLN--H-SPEDSLTSCSWNR-DGTKFVCGGI-----------------RGQFYQCDIE 422 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~--~-~~~~~v~~~~~~~-~~~~l~s~~~-----------------dg~i~iwd~~ 422 (604)
++...+ .+..+|..++....... . ........+++.+ +|+..++... ++.|..||..
T Consensus 96 v~d~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 96 IVDCYY--HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEETTT--EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEECCC--CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 554444 48889987664322211 1 1113468899999 8987766432 3678888886
Q ss_pred CCeeeeee-c-eeEEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEec----
Q psy10566 423 GQVLDSWE-G-VRVNCLWCRSDGKSVLAA-DTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVS---- 492 (604)
Q Consensus 423 ~~~~~~~~-~-~~v~~l~~s~~g~~l~~~-~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~---- 492 (604)
+..+..+. . .....++++++++.++++ +..+.|.+|++..... ........ ...++++++|++.++...
T Consensus 174 ~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 174 TKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 44433322 2 246679999999976666 5568999999875321 11111223 788999999986666544
Q ss_pred ------CCeEEEEecCCCceeeEeeccccc-eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 493 ------TQGVHLWDLRDRILLRKFQGVTQG-QFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 493 ------dg~I~lwd~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
.+.|..+|. .++.+..+...... ...+..+.. .++.++++...++.|.++++..
T Consensus 253 ~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp STTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 467888886 46666666543211 011111222 3566666666678888888753
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.83 E-value=3.2e-07 Score=85.85 Aligned_cols=193 Identities=11% Similarity=0.114 Sum_probs=128.0
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEc-CCCeeeeeece-eEEEEEEcCCCCEEEEEe-CCCeEEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDI-EGQVLDSWEGV-RVNCLWCRSDGKSVLAAD-THHRIRT 457 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~-~dg~I~i 457 (604)
.+..+.+........+.|+ ++..+.+.+.+| .|+.+|+ +++.+....-. ......+.++++.+.... .++.+.+
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 3455554444456889998 677777777776 8999999 57777665432 222222223355555554 4789999
Q ss_pred EEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc--ceEEEEeeeCCCCCcEEEEE
Q psy10566 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ--GQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 458 ~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~sg 535 (604)
||..+.+....+.....-..+ +++++.++.+..++.|.++|..+.+.+.++..... ....+.-+.+ .+|...+..
T Consensus 112 ~D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~ 188 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW-VDGEIFANV 188 (262)
T ss_dssp EETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE-ETTEEEEEE
T ss_pred EECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE-ECCEEEEEE
Confidence 999998877666654333333 35677777777788899999999988888765321 1111111222 267655555
Q ss_pred eCCCcEEEEeCCCCcceEEeeCC------------CCCeeEEEEcCCCCcEEEEEe
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGH------------TRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h------------~~~V~~v~~sp~~~~~l~s~s 579 (604)
-.++.|.+.|..+|+.+..+... ....+.++|+|++..+++||-
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 56889999999999998887642 135689999998566666653
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.5e-06 Score=80.80 Aligned_cols=203 Identities=10% Similarity=-0.045 Sum_probs=133.5
Q ss_pred CcEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
..+..++|++++..|. +-..++.|.+++.+. .. ....+.........++++|++..+..+.... ..|.+++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g--~~--~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~-~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHG--GE--PTTIIRQDLGSPEGIALDHLGRTIFWTDSQL-DRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSS--CC--CEEEECTTCCCEEEEEEETTTTEEEEEETTT-TEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCC--CC--cEEEEECCCCCccEEEEEecCCeEEEEECCC-CEEEEEEcCC
Confidence 4578999999766554 444578999999872 11 1122222235678999999877666665543 3899999875
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEec---CCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEe-CCC
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI---RGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAAD-THH 453 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~-~dg 453 (604)
........ ........++++|++..++.+.. .+.|..+++++.....+. ......+++++++..++.+. ..+
T Consensus 111 ~~~~~~~~-~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 111 TQRRVLFD-TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp CSCEEEEC-SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCEEEEEE-CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCC
Confidence 43322222 12245789999997666655554 368999999876544432 13578899999877766555 457
Q ss_pred eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec
Q psy10566 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~ 512 (604)
.|.++|..................+++. +..++++. ..+.|..+|..+++.+..+..
T Consensus 190 ~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred EEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 8999999765433333333344566664 44555544 568999999999988877753
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.77 E-value=6.7e-07 Score=97.76 Aligned_cols=271 Identities=10% Similarity=-0.019 Sum_probs=164.6
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC----------Ce-eEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL----------GV-AYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~----------~V-~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+..++.++.++.|.-+|.. +++.+-.+..... .+ ..+++ .+..+++++.++ .|..+|..+|
T Consensus 66 ~g~vyv~~~~~~v~AlD~~----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg--~l~alD~~tG 137 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAA----SGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDG--RLIALDAKTG 137 (668)
T ss_dssp TTEEEEEEGGGEEEEEETT----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTS--EEEEEETTTC
T ss_pred CCEEEEECCCCeEEEEECC----CChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCC--EEEEEECCCC
Confidence 4456667778888888887 3333333322111 00 11222 345777888787 8999999999
Q ss_pred eEEEEecCCCCCCeEEEEEec--CCCEEEEEec------CCeEEEEEc-CCCeeeeeece--------------------
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGI------RGQFYQCDI-EGQVLDSWEGV-------------------- 432 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~------dg~i~iwd~-~~~~~~~~~~~-------------------- 432 (604)
+.+..+..........+...| .+..++++.. +|.|..+|. +|+.+-.+...
T Consensus 138 ~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 138 KAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp CEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTC
T ss_pred CEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccC
Confidence 988776532111111111111 2345555543 589999998 57776655321
Q ss_pred -------------eEEEEEEcCCCCEEEEEeCCC-------------------eEEEEEcCCCcccccccCC--------
Q psy10566 433 -------------RVNCLWCRSDGKSVLAADTHH-------------------RIRTYNFEHLTDSNLLQED-------- 472 (604)
Q Consensus 433 -------------~v~~l~~s~~g~~l~~~~~dg-------------------~I~i~d~~~~~~~~~~~~~-------- 472 (604)
....+++.++...++.++.++ .|..+|..+++........
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 012367888888888888776 3999999988766544321
Q ss_pred --CCeeEEEECCCCC---EEEEEecCCeEEEEecCCCceeeEeecccc-ceE--------EE-------------E----
Q psy10566 473 --HPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQF--------TI-------------H---- 521 (604)
Q Consensus 473 --~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~--------~i-------------~---- 521 (604)
.+.....+..+++ .+++++.+|.++++|..+|+.+........ ... .+ .
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 2333333334665 688899999999999999988744332110 000 00 0
Q ss_pred -------eeeCCCCCcEEEEE------------------------------------eCCCcEEEEeCCCCcceEEeeCC
Q psy10566 522 -------SCFGGANQDFVASG------------------------------------SEDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 522 -------~~~~~~~~~~l~sg------------------------------------s~dg~I~iwd~~~~~~~~~l~~h 558 (604)
...++|+...++.. ..+|.|+.||..+|+.+.....+
T Consensus 378 ~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~ 457 (668)
T 1kv9_A 378 FGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP 457 (668)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC
Confidence 01223443443321 13488999999999998877644
Q ss_pred CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 559 TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 559 ~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
. ++....+... +.+++.++.||.|+.||.++++
T Consensus 458 ~-~~~~~~~~t~-gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 458 T-HWNGGTLSTA-GNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp S-SCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred C-CCcCceeEeC-CCEEEEECCcccchhhhhhcCh
Confidence 3 3333334444 5678888999999999999886
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-05 Score=79.07 Aligned_cols=207 Identities=13% Similarity=0.063 Sum_probs=128.0
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.+.+..+..+ .....++|+++|+++++-..++.|..||.+ . .. ...+. ....+..+++.++|+.+++....+
T Consensus 21 ~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~--g-~~--~~~~~-~~~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 21 PAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPD--G-NQ--QIHAT-VEGKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp CEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTT--C-CE--EEEEE-CSSEEEEEEECTTSCEEEEEECTT
T ss_pred CceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCC--C-ce--EEEEe-CCCCceeEEEcCCCcEEEEeccCC
Confidence 34445555433 467789999999977776678899988876 2 11 12222 234688999999998666554332
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee------------ec-eeEEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW------------EG-VRVNC 436 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~-~~v~~ 436 (604)
...|..+|..+++...............++..+++..+++-..++.|+.+|..+.....+ .. ...+.
T Consensus 94 ~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~png 173 (306)
T 2p4o_A 94 SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANG 173 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEE
T ss_pred cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCC
Confidence 125777888887754433222223345555555555455544688999999864211110 01 13445
Q ss_pred EEEcCCCCEEEEEe-CCCeEEEEEcCC-Ccc--cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 437 LWCRSDGKSVLAAD-THHRIRTYNFEH-LTD--SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 437 l~~s~~g~~l~~~~-~dg~I~i~d~~~-~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
+ +++++.++++. ..+.|..|++.. +.. ...+........++++++|++.++....+.|.++|.. ++.
T Consensus 174 i--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 174 L--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp E--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred c--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 5 78887666554 567899999875 221 1111112346778999999877777778899999975 544
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3e-05 Score=86.87 Aligned_cols=274 Identities=10% Similarity=0.100 Sum_probs=173.1
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec----cCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE----GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~----~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
...|.++...++|. |-.|+.++-|..|+.. ........... -....|.++...++|...+ |+.++ -|..|
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~--~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~--Gl~~~ 382 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI--RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDG--GLNLY 382 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGG--GGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSS--CEEEE
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCC--cccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCC--CeEEE
Confidence 36799999999987 4456777778888865 22222111111 0235699999998887555 55543 29999
Q ss_pred ECCCceEEEEecC-------CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-------ceeEEEEEEcCC
Q psy10566 377 NIETELLRVKLNH-------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-------GVRVNCLWCRSD 442 (604)
Q Consensus 377 d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~v~~l~~s~~ 442 (604)
|..++........ -....|.++...+++..+.+|+.++-+..+|........+. ...|.++...++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 462 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE 462 (795)
T ss_dssp CTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS
T ss_pred cCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC
Confidence 9888765443211 12356899998888886777888778999998654444443 246889998888
Q ss_pred CCEEEEEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec---
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG--- 512 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~--- 512 (604)
|...+.. . +.+.+||..+........ ....|.++..++++...+.. . +.+..||..++.. .+..
T Consensus 463 g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~ 536 (795)
T 4a2l_A 463 GNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKASILP 536 (795)
T ss_dssp SCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECCCSC
T ss_pred CCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEecCCC
Confidence 8855544 4 458889987654333221 13568899999888765544 4 5599999887655 2321
Q ss_pred -cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee---C-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 513 -VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS---G-HTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 513 -~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~---~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
.......+.++...++|.+.+ |+.. -|..||..+++.. .+. + ....|.++...++ +.+.+++ .. -|..|
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~-g~lWi~t-~~-Gl~~~ 610 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWV-GTRE-GFYCFNEKDKQIK-RYNTTNGLPNNVVYGILEDSF-GRLWLST-NR-GISCF 610 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEE-EESS-CEEEEETTTTEEE-EECGGGTCSCSCEEEEEECTT-SCEEEEE-TT-EEEEE
T ss_pred CCCCCCCeeEEEEECCCCCEEE-EeCC-CceeECCCCCcEE-EeCCCCCCchhheEEEEECCC-CCEEEEc-CC-ceEEE
Confidence 011112344455556777554 4444 5888998776533 332 1 1346889998887 5655554 34 46667
Q ss_pred CCCCC
Q psy10566 588 GPHLN 592 (604)
Q Consensus 588 ~~~~~ 592 (604)
++.++
T Consensus 611 ~~~~~ 615 (795)
T 4a2l_A 611 NPETE 615 (795)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 76654
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=2.7e-06 Score=80.52 Aligned_cols=210 Identities=8% Similarity=-0.057 Sum_probs=137.3
Q ss_pred eeEeeEEeccCCC--CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEE-Eec
Q psy10566 336 TCQHRKTLEGHTL--GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC-GGI 412 (604)
Q Consensus 336 ~~~~~~~l~~h~~--~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~ 412 (604)
+.+.+.++. |.. ....+.|+|++..+++.+..+...|.++|+.+++....+..........+++. ++.++. .-.
T Consensus 8 ~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 8 IVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred CceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 344555554 443 35799999987555555543334899999999998888764333233455554 445544 445
Q ss_pred CCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCC------CCeeEEEECCCCC
Q psy10566 413 RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED------HPVMSFTIDATDR 485 (604)
Q Consensus 413 dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~------~~i~~~~~s~~~~ 485 (604)
++.+.++|.. .+.+..+....-....+++||+.++++..++.|.++|..+.+....+.-. ..+..+.+. ++.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred CCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 7899999984 56666664221123446678888888888899999999887655544421 135677777 665
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeecccc----------ceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCC
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQ----------GQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~ 549 (604)
..+....++.|.+.|..+++.+..+..... .......++++++++ +++++...++|++.++...
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 444444678999999999999988864210 011223344557764 6666667889998887653
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.2e-06 Score=82.03 Aligned_cols=193 Identities=10% Similarity=-0.023 Sum_probs=129.8
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeecee--EEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~--v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
+.+..+.+........+.|+ ++..+++.+.+|.|+.+|+ +++.+...-... ...+++.. ++..++.-.++.+.+|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEE
Confidence 34455554444556788887 4677778888899999999 466665552112 23344432 2334444567899999
Q ss_pred EcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEEEEEe
Q psy10566 459 NFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 459 d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~sgs 536 (604)
|..+.+....+.....-..++ ++++.|+++..++.|.++|..+.+.+.++.-.... ...+.-+.+ .+|...+...
T Consensus 122 D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyanvw 198 (268)
T 3nok_A 122 SGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC-ANGVIYANIW 198 (268)
T ss_dssp ETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEET
T ss_pred ECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE-eCCEEEEEEC
Confidence 999988776666544333444 56788888888899999999999988887643321 111121222 2676555555
Q ss_pred CCCcEEEEeCCCCcceEEeeCC-------------CCCeeEEEEcCCCCcEEEEEe
Q psy10566 537 EDGKVYIWHVKRELPIATLSGH-------------TRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 537 ~dg~I~iwd~~~~~~~~~l~~h-------------~~~V~~v~~sp~~~~~l~s~s 579 (604)
.++.|.+.|..+++.+..+... ....+.|+|+|++..+++||-
T Consensus 199 ~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6889999999999998887532 136799999998677777764
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.73 E-value=5.3e-08 Score=96.60 Aligned_cols=255 Identities=11% Similarity=0.062 Sum_probs=154.6
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
..+..+|. +..++.++.|..|| . +.+.......+...+.++...+++... .++ .+ +..+|. +++....
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~----~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t-~~---l~~~d~-~g~~~~~ 92 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-T----DGSVKWFFKSGEIIECRPSIGKDGTIY-FGS-DK---VYAINP-DGTEKWR 92 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-T----TSCEEESSCGGGEEEECCEETTTTEEC-CSS-CE---EEEECC-CGGGGGG
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-C----CCcEEEEEecCCCcccceEEecCCcEE-Eec-Cc---EEEECC-CCcEEEE
Confidence 44555554 55566788899999 6 222233333334455677777777533 333 22 778886 5543322
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc
Q psy10566 387 LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 387 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~ 464 (604)
+.. .........+. +..+.+++.++.+..+|.+++........ .+.++...+++. +++++.++.|..+|.. +.
T Consensus 93 ~~~-~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 93 FDT-KKAIVSDFTIF--EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp SCC------CCEEEE--TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC
T ss_pred EEC-CCCcccCceEE--CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC
Confidence 221 11112223333 56778888899999999886655444322 345556666776 6667888999999988 44
Q ss_pred cccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 465 DSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 465 ~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
...... ....+.++.+.+++... +++ +.|..|| .+++....+...... +......++| .|..++.++.|..
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~---~~~~~~~~~g-~l~v~t~~~gl~~ 239 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWT---VTRPAISEDG-TIYVTSLDGHLYA 239 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCC---CSCCEECTTS-CEEEEETTTEEEE
T ss_pred EeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcc---eeceEECCCC-eEEEEcCCCeEEE
Confidence 333222 34456677777777744 444 7899999 777666555433222 2223334555 4666777888999
Q ss_pred EeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 544 WHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 544 wd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+|. +++.+..+......+.++...++ + .|..++.+|.|..++.
T Consensus 240 ~~~-~g~~~~~~~~~~~~~~~~~~~~~-g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 240 INP-DGTEKWRFKTGKRIESSPVIGNT-D-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp ECT-TSCEEEEEECSSCCCSCCEECTT-S-CEEEECTTCEEEEECT
T ss_pred ECC-CCCEeEEeeCCCCccccceEcCC-C-eEEEecCCCCEEEECC
Confidence 974 56666666655555556666655 3 4666778888999986
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.72 E-value=5.2e-06 Score=77.00 Aligned_cols=192 Identities=11% Similarity=0.087 Sum_probs=128.6
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEc-CCCeeeeeece-e--EEEEEEcCCCCEEEE-EeCCCe
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDI-EGQVLDSWEGV-R--VNCLWCRSDGKSVLA-ADTHHR 454 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~-~~~~~~~~~~~-~--v~~l~~s~~g~~l~~-~~~dg~ 454 (604)
+.+..+.+........+.|++ +..+.+.+.+| .|+.+|+ +++.+....-. . -..+++. ++.+.. .-.++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCE
Confidence 345556555556678899986 56666666654 8999999 57777665432 2 2333333 444444 456789
Q ss_pred EEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEE
Q psy10566 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFV 532 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l 532 (604)
+.+||..+.+....+.....-..++ +++..++++..++.|.++|..+.+.+.++.-...+ ...+.-+.+ .+|...
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~-~~G~ly 163 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW-VNGELL 163 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEE
T ss_pred EEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-eCCEEE
Confidence 9999999988777666544434444 56777777777899999999999888877643221 111111222 366666
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCC-------------CCCeeEEEEcCCCCcEEEEEe
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGH-------------TRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h-------------~~~V~~v~~sp~~~~~l~s~s 579 (604)
+..-.+..|.+.|..+|+.+..+... ....+.++|+|++..+++||-
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 55556889999999999998887522 135689999998666777664
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.71 E-value=4e-07 Score=99.65 Aligned_cols=269 Identities=12% Similarity=-0.004 Sum_probs=154.9
Q ss_pred EEEEcC-CCCeEEEEECCC-----------eEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 306 FCKFSP-DGLKLATGSKDT-----------TVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 306 ~v~fsp-dg~~lasgs~dg-----------~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
.+++.+ +|++++.|+.+. .+.+||.. +.+...+..+.. +.....++++.++++.+++||.++. .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-K 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT-C
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC--CCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC-c
Confidence 456677 888888887543 57888877 444444444432 2333446788899999999886653 7
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cC-----CeEEEEEcCCCeeeeeec-----e--eEEEEEE
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IR-----GQFYQCDIEGQVLDSWEG-----V--RVNCLWC 439 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-----g~i~iwd~~~~~~~~~~~-----~--~v~~l~~ 439 (604)
+++||..++.....-.......-.+++..++++.++.|+ .+ ..+.+||........... . .-....+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 999999887654432211222234566677999999998 44 468999996554444311 0 0000112
Q ss_pred cCCCCEEEEEeCC---------CeEEEEEcCCCcccccccC----------CCCeeEEEEC-CCCCEEEEEecCC-----
Q psy10566 440 RSDGKSVLAADTH---------HRIRTYNFEHLTDSNLLQE----------DHPVMSFTID-ATDRLALLNVSTQ----- 494 (604)
Q Consensus 440 s~~g~~l~~~~~d---------g~I~i~d~~~~~~~~~~~~----------~~~i~~~~~s-~~~~~l~~~~~dg----- 494 (604)
..++..++.++.+ ..+..||..+......... .....++.+. .+++.+++|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 2345555555444 3567888776542211111 1122334443 4677778877532
Q ss_pred ------eEEEEecCCCceeeEe--eccccceEEEEeeeCCCCCcEEEEEeCC-----------CcEEEEeCCCCcceE--
Q psy10566 495 ------GVHLWDLRDRILLRKF--QGVTQGQFTIHSCFGGANQDFVASGSED-----------GKVYIWHVKRELPIA-- 553 (604)
Q Consensus 495 ------~I~lwd~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----------g~I~iwd~~~~~~~~-- 553 (604)
.|.+||..+..-.... ....... ...++. .+++++++.|+.+ ..+.+||..+.+-..
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~-~~~~~~-l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFART-FHTSVV-LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCB-SCEEEE-CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcc-cCCeEE-CCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 6888888776543322 1111111 111122 3789999999864 468999987654221
Q ss_pred EeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 554 TLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 554 ~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
.+........+..+.|+ +++++.||.
T Consensus 505 ~~~~~R~~hs~a~ll~d-g~v~v~GG~ 530 (656)
T 1k3i_A 505 PNSIVRVYHSISLLLPD-GRVFNGGGG 530 (656)
T ss_dssp CCSSCCCTTEEEEECTT-SCEEEEECC
T ss_pred CCCCccccccHhhcCCC-cEEEecCCC
Confidence 11212222344556788 789999885
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.66 E-value=8.5e-06 Score=89.00 Aligned_cols=259 Identities=12% Similarity=0.095 Sum_probs=155.9
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECC--CCCeEEEEeCC----CceEEEEEECCCceEEE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSP--DSSHLLVVGPE----DCHELWVWNIETELLRV 385 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~sp--d~~~l~s~~~d----~~~~i~vwd~~~~~~~~ 385 (604)
+..++.++.|+.|..+|..+ ++.+-.+.... .....+..+| .+..++++... ..+.|..+|..+|+.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~t----G~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKT----GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp BTEEEEECTTSEEEEEETTT----CCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCC----CCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 45677788899999999883 33333332210 0000111111 13345554432 12389999999999887
Q ss_pred EecCCCC------------------------------CCeEEEEEecCCCEEEEEecCCe-------------------E
Q psy10566 386 KLNHSPE------------------------------DSLTSCSWNRDGTKFVCGGIRGQ-------------------F 416 (604)
Q Consensus 386 ~~~~~~~------------------------------~~v~~~~~~~~~~~l~s~~~dg~-------------------i 416 (604)
.+..... .....+++.|+...++.++.++. |
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 7652110 01124688888888888887763 8
Q ss_pred EEEEc-CCCeeeeeec-----------eeEEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCcccccccC----------
Q psy10566 417 YQCDI-EGQVLDSWEG-----------VRVNCLWCRSDGK---SVLAADTHHRIRTYNFEHLTDSNLLQE---------- 471 (604)
Q Consensus 417 ~iwd~-~~~~~~~~~~-----------~~v~~l~~s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~~~~---------- 471 (604)
..+|. +|+.+-.+.. .+.....+..+|+ .++.++.+|.++++|..+++.......
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 88887 5776655542 1122222334665 688899999999999988765411100
Q ss_pred ---CC------------------------CeeEEEECCCCCEEEEEe---------------------------------
Q psy10566 472 ---DH------------------------PVMSFTIDATDRLALLNV--------------------------------- 491 (604)
Q Consensus 472 ---~~------------------------~i~~~~~s~~~~~l~~~~--------------------------------- 491 (604)
.. .-..++++|+...+++..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 00 011267788777766532
Q ss_pred ---cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe-eEEEE
Q psy10566 492 ---STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV-SCVAW 567 (604)
Q Consensus 492 ---~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V-~~v~~ 567 (604)
.+|.|..||+.+++.+-++.......... ....+.+++.|+.||.++.||.++|+.+..+....+.. .-+.+
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~----~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~ 508 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYPTHWNGGT----LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF 508 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEESSSCCCCE----EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred CCCccceEEEEeCCCCcEEEEccCCCCCcCce----eEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE
Confidence 23779999999998876665432211111 11356788899999999999999999998887653211 22344
Q ss_pred cCCCCcEEEEEe
Q psy10566 568 NPVYHQMIASVS 579 (604)
Q Consensus 568 sp~~~~~l~s~s 579 (604)
..++..+++.++
T Consensus 509 ~~~G~~yva~~~ 520 (668)
T 1kv9_A 509 ELAGRQYVAIMA 520 (668)
T ss_dssp EETTEEEEEEEE
T ss_pred EECCEEEEEEEe
Confidence 445344565555
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.63 E-value=0.0001 Score=73.60 Aligned_cols=255 Identities=7% Similarity=-0.063 Sum_probs=157.4
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
+.+..+|.+..+++ +|+.+. ...|+..+++ .... ...+. ....+..++|++.+..|..+.... +.|+.++..
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~--g~~~--~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~-~~I~r~~~~ 103 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFAN-RIDIRQVLPH--RSEY--TLLLN-NLENAIALDFHHRRELVFWSDVTL-DRILRANLN 103 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEEC-BSCEEEECTT--SCCE--EEEEC-SCSCEEEEEEETTTTEEEEEETTT-TEEEEEETT
T ss_pred CCCCCcccccccCc-eeEeec-ccceEEEeCC--CCee--EEeec-CCCceEEEEEeccccEEEEEeccC-CceEEEecC
Confidence 34455677777744 444333 3457777765 2222 22223 334578999998777777666544 389999998
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C-C
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H-H 453 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d-g 453 (604)
.+........ .......+++.+.+.. +++-...+.|.+.+++|.....+.. .....+++.|.+..++.... . +
T Consensus 104 g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~ 182 (349)
T 3v64_C 104 GSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP 182 (349)
T ss_dssp SCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred CCCceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCC
Confidence 7654443332 2234678999985554 4555567899999998765444322 36789999997666665554 4 7
Q ss_pred eEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 454 RIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
.|..+++.......+.. .-.....++++|++..|+.+. ..+.|..+|+........+.........+.. ..+.+
T Consensus 183 ~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav----~~~~l 258 (349)
T 3v64_C 183 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV----FEDSL 258 (349)
T ss_dssp EEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE----ETTEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE----ECCEE
Confidence 89999887654443333 344578999998777666654 4678999998754332223222223333432 24566
Q ss_pred EEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
+++-...+.|..++..+|+.+..+........++++
T Consensus 259 y~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 259 YWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp EEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 666667888999987777777666543333344443
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.60 E-value=9e-05 Score=82.75 Aligned_cols=276 Identities=9% Similarity=0.095 Sum_probs=167.4
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
..|.++...++|.+.+ |+.+ -+.+||.. +.......... -....|.++...++|...+.....| |.++
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~G---l~~~ 283 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNAN--TETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNG---IMIL 283 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETT--TTEEEC-----------CCCCEEEEEECTTSEEEEEESSSC---EEEE
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCC--CCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCC---eEEE
Confidence 5699999999887555 4444 58888876 22222221111 1245699999988886555433355 8899
Q ss_pred ECCCceEEEEec-------------CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee------------ec
Q psy10566 377 NIETELLRVKLN-------------HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW------------EG 431 (604)
Q Consensus 377 d~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~ 431 (604)
|..++....... .-....|.++...++|. +..|+.++-|..++........+ ..
T Consensus 284 ~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 284 DLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp ETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSS
T ss_pred CCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCC
Confidence 988765432111 11235688888888775 56677777788888764443333 12
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 432 VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
..|.++...++|. +..|+.++-|..||..+....... .....|.++...+++. |.+|+.++.+..+|..+++..
T Consensus 363 ~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEE
T ss_pred cceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEE
Confidence 3588898888877 556666667888987654332221 1245688888887776 455777777999998776543
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-----CCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-----TRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-----~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
. +.........+.++...+++. |..|+. +-|..||..+++........ ...|.++...++ +.+.+ |+.++
T Consensus 441 ~-~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWi-gt~~~ 515 (781)
T 3v9f_A 441 I-IELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSE-GRFWI-GTFGG 515 (781)
T ss_dssp E-CCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTT-CCEEE-EESSS
T ss_pred E-eccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCC-CCEEE-EEcCC
Confidence 2 221111112344444445665 555555 55889998876654333222 367899999887 55544 44433
Q ss_pred cEEEECCCCC
Q psy10566 583 TVRIWGPHLN 592 (604)
Q Consensus 583 ~I~iW~~~~~ 592 (604)
-|..|+..++
T Consensus 516 Gl~~~~~~~~ 525 (781)
T 3v9f_A 516 GVGIYTPDMQ 525 (781)
T ss_dssp CEEEECTTCC
T ss_pred CEEEEeCCCC
Confidence 3777887654
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-05 Score=85.51 Aligned_cols=271 Identities=12% Similarity=-0.013 Sum_probs=156.3
Q ss_pred CCeEEEEEC-CCeEEEEEe-CCCCceeEeeEEeccCCC-----------CeeEEEECCCCCe----EEEEeCCCceEEEE
Q psy10566 313 GLKLATGSK-DTTVIIWDV-DPVTFTCQHRKTLEGHTL-----------GVAYLAWSPDSSH----LLVVGPEDCHELWV 375 (604)
Q Consensus 313 g~~lasgs~-dg~i~iwd~-~~~~~~~~~~~~l~~h~~-----------~V~~l~~spd~~~----l~s~~~d~~~~i~v 375 (604)
+..++.++. ++.|.-+|. .++. .+-.+..... ....++++|.+.. +++++.++ .+..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~----~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg--~l~A 135 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGT----ILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDG--NVAA 135 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS----EEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTS--EEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCc----EEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCC--EEEE
Confidence 334555555 777877887 6222 2222221110 0123455444445 78888887 8999
Q ss_pred EECCCceEEEEecCCCC---CCeEE-EEEecCCCEEEEEe------cCCeEEEEEc-CCCeeeeeecee-E---------
Q psy10566 376 WNIETELLRVKLNHSPE---DSLTS-CSWNRDGTKFVCGG------IRGQFYQCDI-EGQVLDSWEGVR-V--------- 434 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~l~s~~------~dg~i~iwd~-~~~~~~~~~~~~-v--------- 434 (604)
+|..+|+.+-+...... ..+.+ -.+ .++ .+++++ .+|.|+.+|. +|+.+-.+.... .
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~ 213 (599)
T 1w6s_A 136 LNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDF 213 (599)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTT
T ss_pred EECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccc
Confidence 99999998776543210 01111 111 134 555555 3799999998 577765554321 1
Q ss_pred ------------------------------EEEEEcCCCCEEEEEeCC----------------CeEEEEEcCCCccccc
Q psy10566 435 ------------------------------NCLWCRSDGKSVLAADTH----------------HRIRTYNFEHLTDSNL 468 (604)
Q Consensus 435 ------------------------------~~l~~s~~g~~l~~~~~d----------------g~I~i~d~~~~~~~~~ 468 (604)
...++.++...++.++.+ +.|..+|..+++....
T Consensus 214 ~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~ 293 (599)
T 1w6s_A 214 NIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFG 293 (599)
T ss_dssp TTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeE
Confidence 124566677777877665 3799999998876554
Q ss_pred ccCCC----------CeeEEEEC-CCC---CEEEEEecCCeEEEEecCCCceeeEeecccc----------ceEEE----
Q psy10566 469 LQEDH----------PVMSFTID-ATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQ----------GQFTI---- 520 (604)
Q Consensus 469 ~~~~~----------~i~~~~~s-~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~----------~~~~i---- 520 (604)
.+... ...-+... .+| ..++.++.+|.++++|.++++.+........ ....+
T Consensus 294 ~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~ 373 (599)
T 1w6s_A 294 YQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPE 373 (599)
T ss_dssp EESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGG
T ss_pred eecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccc
Confidence 43211 11112222 567 4677788999999999999988765542110 00000
Q ss_pred -----------E-----------eeeCCCCCcEEEEE---------------------------------e------CCC
Q psy10566 521 -----------H-----------SCFGGANQDFVASG---------------------------------S------EDG 539 (604)
Q Consensus 521 -----------~-----------~~~~~~~~~~l~sg---------------------------------s------~dg 539 (604)
. ...++|+..++++. + .+|
T Consensus 374 ~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G 453 (599)
T 1w6s_A 374 YGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG 453 (599)
T ss_dssp GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCE
T ss_pred cCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcC
Confidence 0 01122333333221 1 357
Q ss_pred cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 540 KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 540 ~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|..||..+++.+...... .++..-..... +.+++.++.||.++.||.++++
T Consensus 454 ~l~A~D~~tG~~~W~~~~~-~~~~~g~~~ta-gg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMER-FAVWGGTMATA-GDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSBCEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred eEEEEECCCCCEEeEecCC-CCccCcceEec-CCEEEEECCCCeEEEEECCCCC
Confidence 8999999999988776522 12221111223 4567779999999999999887
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.56 E-value=9.6e-06 Score=75.86 Aligned_cols=193 Identities=8% Similarity=-0.044 Sum_probs=125.8
Q ss_pred eeEEeccCCCC--eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCe
Q psy10566 339 HRKTLEGHTLG--VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQ 415 (604)
Q Consensus 339 ~~~~l~~h~~~--V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~ 415 (604)
.+.++. |... ...+.|+ ++..+.+.+.++...|+++|+.+++........ .........++++.+.... .++.
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC--CccceeEEEEeCCEEEEEEeeCCE
Confidence 445554 5433 4788998 677777777776568999999999988887643 2333333333455555554 5789
Q ss_pred EEEEEc-CCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---C---CCeeEEEECCCCCEEE
Q psy10566 416 FYQCDI-EGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---D---HPVMSFTIDATDRLAL 488 (604)
Q Consensus 416 i~iwd~-~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~---~~i~~~~~s~~~~~l~ 488 (604)
+.+||. +.+.+..+.-.. ....++++++.++.++.++.|.++|..+.+....+.- . ..++.+.+. +|+..+
T Consensus 109 v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp EEEEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 999999 467777665421 3344557788888887788999999998766554432 2 223456665 666554
Q ss_pred EEecCCeEEEEecCCCceeeEeeccc---------cceEEEEeeeCCCCCcEEEEEeC
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQGVT---------QGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
....++.|.+.|.++++.+..+.... ........++++|+++.|+..+.
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 44468899999999999988876421 11123344555676655555543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-05 Score=84.92 Aligned_cols=258 Identities=12% Similarity=0.039 Sum_probs=151.9
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC--CeeEEEECC--CCCeEEEEeC------CCceEEEEEECCCce
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL--GVAYLAWSP--DSSHLLVVGP------EDCHELWVWNIETEL 382 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~--~V~~l~~sp--d~~~l~s~~~------d~~~~i~vwd~~~~~ 382 (604)
+..++.++.|+.+..+|..++... -...+..+.. .+. -+| .+..+++++. ++ .|..+|..+|+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~--W~~~~~~~~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g--~v~a~D~~tG~ 187 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKIN--WEVEVCDPKVGSTLT---QAPFVAKDTVLMGCSGAELGVRG--AVNAFDLKTGE 187 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEE--EEEECCCGGGTCBCC---SCCEEETTEEEEECBCGGGTCCC--EEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEE--EEecCCCCCccceec---cCCEEECCEEEEEecCCccCCCC--EEEEEECCCCc
Confidence 456777888999999998732222 2222222111 111 111 1335555554 45 89999999999
Q ss_pred EEEEecCCCCC-------------------------------------CeEEEEEecCCCEEEEEecC------------
Q psy10566 383 LRVKLNHSPED-------------------------------------SLTSCSWNRDGTKFVCGGIR------------ 413 (604)
Q Consensus 383 ~~~~~~~~~~~-------------------------------------~v~~~~~~~~~~~l~s~~~d------------ 413 (604)
.+-++...... ....+++.++...++.++.+
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 88766532110 00235666766677666532
Q ss_pred ----CeEEEEEc-CCCeeeeeece-----------eEEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCcccccccCC--
Q psy10566 414 ----GQFYQCDI-EGQVLDSWEGV-----------RVNCLWCRSDGK---SVLAADTHHRIRTYNFEHLTDSNLLQED-- 472 (604)
Q Consensus 414 ----g~i~iwd~-~~~~~~~~~~~-----------~v~~l~~s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~~~~~-- 472 (604)
+.|..+|. +|+.+-.+... ...-+....+|+ .++.++.+|.++++|..+++........
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 35888888 56766544311 111122224674 5677888999999999887654322211
Q ss_pred ------------CCe--------------------------eEEEECCCCCEEEEEec----------------------
Q psy10566 473 ------------HPV--------------------------MSFTIDATDRLALLNVS---------------------- 492 (604)
Q Consensus 473 ------------~~i--------------------------~~~~~s~~~~~l~~~~~---------------------- 492 (604)
.++ ..++++|+...+++.+.
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 111 24578888887777643
Q ss_pred ---------------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 493 ---------------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 493 ---------------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
++.|..||+.+++.+-++....... . ......+..++.++.||.|+.||.++|+.+..+..
T Consensus 428 ~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~-~---~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAW-G---GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCC-S---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCcc-c---eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 4789999999998877665322110 0 00012355777799999999999999999988875
Q ss_pred CCCC-eeEEEEcCCCCcEEEEEeCC
Q psy10566 558 HTRT-VSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 558 h~~~-V~~v~~sp~~~~~l~s~s~D 581 (604)
.... -.-+.+..++..++++.+..
T Consensus 504 ~~~~~~~p~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 504 PSGGIGSPMTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp SSCCCSCCEEEEETTEEEEEEEECC
T ss_pred CCCcEeeeEEEEECCEEEEEEECCC
Confidence 4321 12244556633444444433
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=7.3e-06 Score=87.66 Aligned_cols=229 Identities=8% Similarity=-0.059 Sum_probs=139.9
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCC---CCeEE-EEEecCCCEEEEEec------CCeEEEEEc-CCCeee
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE---DSLTS-CSWNRDGTKFVCGGI------RGQFYQCDI-EGQVLD 427 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~l~s~~~------dg~i~iwd~-~~~~~~ 427 (604)
+..+++++.++ .+..+|..+|+.+........ ..+.+ ... .+..+++++. ++.|..+|. +|+.+-
T Consensus 115 ~~~v~v~~~dg--~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANG--HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCC--EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 55777777777 899999999998776653210 01111 111 2345555554 789999998 577765
Q ss_pred eeecee-E---------------------------------------EEEEEcCCCCEEEEEeCC---------------
Q psy10566 428 SWEGVR-V---------------------------------------NCLWCRSDGKSVLAADTH--------------- 452 (604)
Q Consensus 428 ~~~~~~-v---------------------------------------~~l~~s~~g~~l~~~~~d--------------- 452 (604)
.+.... . ..+++.++...++.++.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 554321 0 124566666667666532
Q ss_pred -CeEEEEEcCCCcccccccCC----------CCeeEEEECCCCC---EEEEEecCCeEEEEecCCCceeeEeecccc---
Q psy10566 453 -HRIRTYNFEHLTDSNLLQED----------HPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILLRKFQGVTQ--- 515 (604)
Q Consensus 453 -g~I~i~d~~~~~~~~~~~~~----------~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~--- 515 (604)
+.|..+|..+++.....+.. ....-+....+|+ .+++++.+|.++++|..+++.+..+.....
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 35899999887765444321 1111122234674 577788899999999999988766542210
Q ss_pred ---------c-------------eEEEE-----------eeeCCCCCcEEEEEe--------------------------
Q psy10566 516 ---------G-------------QFTIH-----------SCFGGANQDFVASGS-------------------------- 536 (604)
Q Consensus 516 ---------~-------------~~~i~-----------~~~~~~~~~~l~sgs-------------------------- 536 (604)
. ...+. ...++|+..+++..+
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 0 00000 122345555555543
Q ss_pred -----------CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 537 -----------EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 537 -----------~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+|.|+.||..+++.+.++... ..+.+...... +.+++.++.||.|+.||.++++
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~-gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTK-GGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEEC-CCEEEEEcCCCeEEEEECCCCC
Confidence 3578999999999988877533 22322222323 4566678999999999999887
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.54 E-value=0.00017 Score=70.44 Aligned_cols=230 Identities=9% Similarity=-0.010 Sum_probs=133.9
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C-
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G- 414 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g- 414 (604)
.+.+..+... .....++|+++++.+++-...+ .|..||..+.. ...+. ....+..+++.++|+.+++.... +
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~--~I~~~d~~g~~-~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVG--EIVSITPDGNQ-QIHAT--VEGKVSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTT--EEEEECTTCCE-EEEEE--CSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCC--eEEEECCCCce-EEEEe--CCCCceeEEEcCCCcEEEEeccCCcc
Confidence 3344455432 4578899999998666654555 89999987643 33332 23468899999999966655433 2
Q ss_pred eEEEEEc-CCCeeeeee--c-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc----------c-ccCCCCeeEEE
Q psy10566 415 QFYQCDI-EGQVLDSWE--G-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN----------L-LQEDHPVMSFT 479 (604)
Q Consensus 415 ~i~iwd~-~~~~~~~~~--~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~----------~-~~~~~~i~~~~ 479 (604)
.|..+|. +++...... . .....++..+++..+++-..++.|+.+|........ . ...-.....+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 4666775 444322211 1 123445555555444444458899999976531100 0 0111233444
Q ss_pred ECCCCCEEEEEe-cCCeEEEEecCC-Cce--eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE--
Q psy10566 480 IDATDRLALLNV-STQGVHLWDLRD-RIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA-- 553 (604)
Q Consensus 480 ~s~~~~~l~~~~-~dg~I~lwd~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~-- 553 (604)
+++++.++++. ..+.|..||+.. +.. ...+... . ....+...++|++.++....+.|.++|.. ++...
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~---~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~ 248 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-T---NIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA 248 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-C---CCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-C---CCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence 78887666554 567899999875 321 1111110 0 01113335788887777778899999975 65532
Q ss_pred EeeCCCCCeeEEEEc---CCCCcEEEEEe
Q psy10566 554 TLSGHTRTVSCVAWN---PVYHQMIASVS 579 (604)
Q Consensus 554 ~l~~h~~~V~~v~~s---p~~~~~l~s~s 579 (604)
.+......+++++|. |+++.++++..
T Consensus 249 ~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 249 QAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ecccccCCceEEEEecccCCCCEEEEECC
Confidence 233333568999998 78445555544
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.51 E-value=0.00015 Score=81.07 Aligned_cols=277 Identities=9% Similarity=0.038 Sum_probs=168.6
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-------ccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-------EGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-------~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
....|.++...++|. |-.|+.++-|..|+.... ........ .-....|.+++..++|...+.....|
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~G--- 384 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPP--TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGG--- 384 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCC--SCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSC---
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCC--cceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCc---
Confidence 346799999999887 455666777888887622 22211100 01235699999988887554433455
Q ss_pred EEEEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-----ceeEEEEEEcCCCCE
Q psy10566 373 LWVWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-----GVRVNCLWCRSDGKS 445 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~v~~l~~s~~g~~ 445 (604)
+..||..++....... ......|.++...+++.. .+|+.++-+..+|........+. ...|.++...++|..
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI 463 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE
Confidence 8899987654332111 123456888888777764 45777677888888655554443 236888888888774
Q ss_pred EEEEeCCCeEEEEEcCCCcccccccC------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec-cccceE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQE------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG-VTQGQF 518 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~-~~~~~~ 518 (604)
..++. +.+..||..+......... ...|.++..+++|... +++.++.+..||..+++.. .+.. ..-...
T Consensus 464 -wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~ 539 (781)
T 3v9f_A 464 -WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTFGGGVGIYTPDMQLVR-KFNQYEGFCSN 539 (781)
T ss_dssp -EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEESSSCEEEECTTCCEEE-EECTTTTCSCS
T ss_pred -EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEcCCCEEEEeCCCCeEE-EccCCCCCCCC
Confidence 44555 6688999877554332211 3578899999888754 4555445888998766433 3321 111112
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC----CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH----TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h----~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+.++...++|.+.+ |+.+|.|..||..+++. ..+... ...|.++...++ +.+.++ +.+| |..+++.+.
T Consensus 540 ~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~-g~lW~~-t~~G-l~~~~~~~~ 612 (781)
T 3v9f_A 540 TINQIYRSSKGQMWL-ATGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKN-GNIWAS-TNTG-ISCYITSKK 612 (781)
T ss_dssp CEEEEEECTTSCEEE-EETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSS-SCEEEE-CSSC-EEEEETTTT
T ss_pred eeEEEEECCCCCEEE-EECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCC-CCEEEE-cCCc-eEEEECCCC
Confidence 344445456776544 45577658899887653 333221 246888888887 555544 4555 556666543
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.5e-05 Score=78.51 Aligned_cols=236 Identities=14% Similarity=0.221 Sum_probs=145.9
Q ss_pred CeeEEEECC-CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C----eEEEEEcC
Q psy10566 349 GVAYLAWSP-DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G----QFYQCDIE 422 (604)
Q Consensus 349 ~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g----~i~iwd~~ 422 (604)
....++|+| ++..|.++... ..|+.+|..++....... .......++|+++++.++++... + .+..++.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~--~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ--HPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT--EEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCEEEECCCCCCeEEEEeCC--CcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 457899998 45566666654 389999998876554443 34568899999999966666542 1 35555555
Q ss_pred CCee--eee-eceeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEE-ecCCe
Q psy10566 423 GQVL--DSW-EGVRVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLN-VSTQG 495 (604)
Q Consensus 423 ~~~~--~~~-~~~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~-~~dg~ 495 (604)
+... ..+ .......++++| +|..+++-..++.|..++........... .......++++|++++++++ ...+.
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 4332 222 123467788999 67766666677899999988654322222 23457789999999955554 45788
Q ss_pred EEEEecCC--Cce--eeEeeccc---c---c-------eEEEEeeeC--------CCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 496 VHLWDLRD--RIL--LRKFQGVT---Q---G-------QFTIHSCFG--------GANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 496 I~lwd~~~--~~~--~~~~~~~~---~---~-------~~~i~~~~~--------~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
|..++... +.. +..+.+.. . . ......++. .++|.+.++-...+.|+.++ .+|.
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 99988653 221 22222210 0 0 001101221 13456666666678888888 4454
Q ss_pred ceEEeeCC---------C---------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 551 PIATLSGH---------T---------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 551 ~~~~l~~h---------~---------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.. ++.+. . .....++++|+++.++++-..+..|+..+++
T Consensus 373 v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 373 VT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 33 33221 1 2578999999547777777777888887754
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.50 E-value=0.00026 Score=71.97 Aligned_cols=241 Identities=7% Similarity=-0.016 Sum_probs=152.6
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc----eEEEEecCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE----LLRVKLNHS 390 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~----~~~~~~~~~ 390 (604)
+|+.+. ...|+..+++.. ... ... .....+..++|++.+..|..+.... ..|+.+++... .....+. .
T Consensus 85 ~ll~~~-~~~I~~i~l~~~--~~~--~~~-~~~~~~~~l~~d~~~~~lywsD~~~-~~I~~~~~~g~~~~~~~~~~~~-~ 156 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRS--EYT--SLI-PNLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-R 156 (400)
T ss_dssp EEEEEE-TTEEEEECTTSC--SCE--EEE-CSCSCEEEEEEETTTTEEEEEETTT-TEEEEEEC------CCCEEEEC-S
T ss_pred eeEEec-cceeEEEccCCc--cee--Eec-cccCcceEEeeeeccCceEEEecCC-CeEEEEEcccCCCCCcceEEEe-C
Confidence 444443 467888887722 211 222 2445788999999777777666544 38999998752 1222222 2
Q ss_pred CCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCc
Q psy10566 391 PEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLT 464 (604)
Q Consensus 391 ~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~ 464 (604)
.......+++.+. ++.+++-...+.|.+.++++.....+.. .....+++.|.+..++.... .+.|...++....
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 236 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc
Confidence 3345788999984 4455555667899999998765544432 35889999997777766653 3689999987655
Q ss_pred ccccccC-CCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec--cccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 465 DSNLLQE-DHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG--VTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 465 ~~~~~~~-~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
...+... -.....+++++++..|+.+. ..+.|..+|+........... .......+.. ..+.++++-...+.
T Consensus 237 ~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v----~~~~lywtd~~~~~ 312 (400)
T 3p5b_L 237 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV----FEDKVFWTDIINEA 312 (400)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE----ETTEEEEEESSSCS
T ss_pred cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE----eCCEEEEecCCCCe
Confidence 4444332 35678999998877777665 467899999865433322222 1222333322 24556677777889
Q ss_pred EEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 541 VYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
|..+|..+|+.+..+........++..
T Consensus 313 V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 313 IFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEEEEcCCCCceEEEecCCCCCceEEE
Confidence 999998888887777654444555543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.49 E-value=8.7e-05 Score=82.30 Aligned_cols=252 Identities=10% Similarity=0.040 Sum_probs=130.4
Q ss_pred cCCC-cEEEEEEc-CCCCeEEEEEC-CC----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc-
Q psy10566 299 DHCD-EVWFCKFS-PDGLKLATGSK-DT----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC- 370 (604)
Q Consensus 299 ~H~~-~V~~v~fs-pdg~~lasgs~-dg----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~- 370 (604)
+|.- .+...+|| |||++||.+.. +| +|+++|+..+. .. ....+. .....++|+|||+.|+....+..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~-~~-l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS-QT-IADKVS---GTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT-CC-CCCCEE---EECSCCEECSSTTEEEEEEECTTC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC-Ee-CCcccc---CceeeEEEecCCCEEEEEEECCCC
Confidence 4553 68889999 99998886543 22 59999998330 10 001111 12356889999998888776531
Q ss_pred --eEEEEEECCCceE--EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEE
Q psy10566 371 --HELWVWNIETELL--RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSV 446 (604)
Q Consensus 371 --~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l 446 (604)
..|+.+++.++.. ...+..........+.|+|||++|+..+.++
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-------------------------------- 292 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-------------------------------- 292 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS--------------------------------
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC--------------------------------
Confidence 2688899877631 1222212223456777888888777654321
Q ss_pred EEEeCCCeEEEEEcCCCc--c--ccccc-CCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCceeeE-eeccccc
Q psy10566 447 LAADTHHRIRTYNFEHLT--D--SNLLQ-EDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRILLRK-FQGVTQG 516 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~--~--~~~~~-~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~~~~~-~~~~~~~ 516 (604)
....|.++|+.+.. . ..+.. ......++.|+..+.+++.+..+ ..|..+|+.++..... +..+...
T Consensus 293 ----~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~ 368 (751)
T 2xe4_A 293 ----ETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED 368 (751)
T ss_dssp ----SCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS
T ss_pred ----CCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC
Confidence 11234455554431 1 11111 12334444444333334444333 2577778765322222 2223222
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCc--EEEEeC-------CCCcceEEeeCC-CCCeeEEEE----cCCCCcEEEEEeCC-
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGK--VYIWHV-------KRELPIATLSGH-TRTVSCVAW----NPVYHQMIASVSDD- 581 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~--I~iwd~-------~~~~~~~~l~~h-~~~V~~v~~----sp~~~~~l~s~s~D- 581 (604)
. .+..... ..+.++++...+|. |+++|+ .+++....+... ...+..+.+ ++++..++++.+..
T Consensus 369 ~-~l~~~~~-~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~ 446 (751)
T 2xe4_A 369 V-FMESIAV-RSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLA 446 (751)
T ss_dssp E-EEEEEEE-CSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETT
T ss_pred c-EEEEEEE-ECCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCC
Confidence 1 2222222 23456677777875 555665 344314444321 122344433 34545566665544
Q ss_pred --CcEEEECCCCCC
Q psy10566 582 --CTVRIWGPHLNT 593 (604)
Q Consensus 582 --g~I~iW~~~~~~ 593 (604)
+.+..+++.+++
T Consensus 447 ~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 447 TPNTWFDVSPQDHS 460 (751)
T ss_dssp EEEEEEEECTTTCC
T ss_pred CCCEEEEEECCCCc
Confidence 457777776654
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.49 E-value=0.00031 Score=68.93 Aligned_cols=229 Identities=8% Similarity=0.003 Sum_probs=142.2
Q ss_pred EEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC----ceEEEEecCCC
Q psy10566 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSP 391 (604)
Q Consensus 316 lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~----~~~~~~~~~~~ 391 (604)
|+.+. ...|+..+++.. .....+. ....+..++|++.+..|+.+...+ ..|..+++.+ ......+. ..
T Consensus 4 ll~~~-~~~I~~i~~~~~----~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~-~~I~~~~~~g~~~~~~~~~~~~-~~ 75 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRS----EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-RD 75 (316)
T ss_dssp EEEEC-BSSEEEEETTSC----CCEEEEC-SCSSEEEEEEETTTTEEEEEETTT-TEEEEEEC--------CEEEEC-SS
T ss_pred EEEEC-CCeEEEEECCCc----ceEehhc-CCCceEEEEEEeCCCEEEEEECCC-CcEEEEECCCCCCCcccEEEEe-CC
Confidence 44433 356888888722 1222232 345678999999877776666553 3899999876 22222222 12
Q ss_pred CCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCcc
Q psy10566 392 EDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTH--HRIRTYNFEHLTD 465 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~d--g~I~i~d~~~~~~ 465 (604)
-.....+++.+.+..+ ++-...+.|.++++++.....+. ......+++.|.+..++.+... +.|..++......
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 2346789998755544 55566789999999876554432 2367899999977766666543 6898888865433
Q ss_pred ccccc-CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEee-c--cccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 466 SNLLQ-EDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQ-G--VTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 466 ~~~~~-~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~-~--~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
..+.. .-.....+++++++..|+.+. ..+.|..+|+... ..+.+. . .......+.. ..+.++++-...+.
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav----~~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAV----FEDKVFWTDIINEA 230 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEE----ETTEEEEEETTTTE
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEE----ECCEEEEEECCCCe
Confidence 32322 345678999998877776655 4578999998743 333332 1 1122233322 24566667767889
Q ss_pred EEEEeCCCCcceEEeeC
Q psy10566 541 VYIWHVKRELPIATLSG 557 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~ 557 (604)
|..++..+|+.+..+..
T Consensus 231 V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 231 IFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EEEEETTTCCCCEEEEC
T ss_pred EEEEeCCCCcceEEEec
Confidence 99999888877766654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.48 E-value=0.00013 Score=73.87 Aligned_cols=252 Identities=7% Similarity=-0.066 Sum_probs=156.6
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.-.|.+..+.+ +|+.+. ...|+..++. .... ..... ....+..++|.+.+..|+.+...+ +.|+.++...+.
T Consensus 78 ~~~C~~~~~~~-~l~~~~-~~~I~~i~~~--~~~~--~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~-~~I~r~~~~g~~ 149 (386)
T 3v65_B 78 RRSCKALGPEP-VLLFAN-RIDIRQVLPH--RSEY--TLLLN-NLENAIALDFHHRRELVFWSDVTL-DRILRANLNGSN 149 (386)
T ss_dssp SSCEEECSSCC-EEEEEC-BSCEEEECTT--SCCC--EEEEC-SCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCC
T ss_pred CCeECCccccc-eeEeec-CccceeeccC--CCcE--EEEec-CCCccEEEEEecCCCeEEEEeCCC-CcEEEEecCCCC
Confidence 34455655533 444433 4567777776 2222 22222 334588999998777777666544 389999998776
Q ss_pred EEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C-CeEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H-HRIR 456 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d-g~I~ 456 (604)
....+.. .......+++.+.+.. +++-...+.|.+.++++.....+.. .....+++.|.+..++.+.. . +.|.
T Consensus 150 ~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 150 VEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred cEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 4443332 2234577899875554 4555567789999998765443322 36789999987776666654 3 6898
Q ss_pred EEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEE
Q psy10566 457 TYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534 (604)
Q Consensus 457 i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 534 (604)
.++........+.. .-.....++++|++..|+.+. ..+.|..+|+........+.........+.. ..+.++++
T Consensus 229 r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav----~~~~ly~t 304 (386)
T 3v65_B 229 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV----FEDSLYWT 304 (386)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE----ETTEEEEE
T ss_pred EEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE----ECCEEEEe
Confidence 88887654444333 234578999998776666554 4678999998654333223222223333332 34566677
Q ss_pred EeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 535 GSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 535 gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
-...+.|..+|..+|+.+..+........++++
T Consensus 305 d~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp ETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred eCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 777889999998788877777654344445544
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=4e-05 Score=82.00 Aligned_cols=262 Identities=10% Similarity=0.016 Sum_probs=152.0
Q ss_pred EEEcCCCCe----EEEEECCCeEEEEEeCCCCceeEeeEEeccCC--CCeeE-EEECCCCCeEEEEeC------CCceEE
Q psy10566 307 CKFSPDGLK----LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT--LGVAY-LAWSPDSSHLLVVGP------EDCHEL 373 (604)
Q Consensus 307 v~fspdg~~----lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~--~~V~~-l~~spd~~~l~s~~~------d~~~~i 373 (604)
++++|.+.. ++.++.|+.+.-+|..++.... ...+..+. ..+.+ ... -++ .+++++. ++ .|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W--~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g--~v 184 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVW--KVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRG--YL 184 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEE--EEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCC--EE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEE--eecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCC--eE
Confidence 344444444 7788889999999987332222 22222211 01111 111 134 4555442 45 89
Q ss_pred EEEECCCceEEEEecCCCCC------------------------------------Ce-EEEEEecCCCEEEEEecC---
Q psy10566 374 WVWNIETELLRVKLNHSPED------------------------------------SL-TSCSWNRDGTKFVCGGIR--- 413 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~------------------------------------~v-~~~~~~~~~~~l~s~~~d--- 413 (604)
+.+|..+|+.+-++...... .+ ...++.++...++.++.+
T Consensus 185 ~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p 264 (599)
T 1w6s_A 185 TAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAP 264 (599)
T ss_dssp EEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC
T ss_pred EEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcc
Confidence 99999999988766532211 00 134566777777777665
Q ss_pred -------------CeEEEEEc-CCCeeeeeece-----------eEEEEEEc-CCC---CEEEEEeCCCeEEEEEcCCCc
Q psy10566 414 -------------GQFYQCDI-EGQVLDSWEGV-----------RVNCLWCR-SDG---KSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 414 -------------g~i~iwd~-~~~~~~~~~~~-----------~v~~l~~s-~~g---~~l~~~~~dg~I~i~d~~~~~ 464 (604)
+.|..+|. +|+..-.+... ...-+... .+| ..++.++.+|.++++|..+++
T Consensus 265 ~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 265 WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGA 344 (599)
T ss_dssp SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCC
Confidence 37888888 46665544321 01112222 467 467778899999999998876
Q ss_pred ccccccC--------------CCC--------------------------eeEEEECCCCCEEEEEe-------------
Q psy10566 465 DSNLLQE--------------DHP--------------------------VMSFTIDATDRLALLNV------------- 491 (604)
Q Consensus 465 ~~~~~~~--------------~~~--------------------------i~~~~~s~~~~~l~~~~------------- 491 (604)
....... ..+ -..++++|+...+++..
T Consensus 345 ~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 424 (599)
T 1w6s_A 345 LVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLP 424 (599)
T ss_dssp EEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCC
T ss_pred EeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccccc
Confidence 5432211 001 12456777766665532
Q ss_pred --------------------------cCCeEEEEecCCCceeeEeeccccce-EEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 492 --------------------------STQGVHLWDLRDRILLRKFQGVTQGQ-FTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 492 --------------------------~dg~I~lwd~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
..|.+..||+.+++.+-+........ ..+ ...+.+++.|+.||.++.|
T Consensus 425 ~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~-----~tagg~vf~gt~dg~l~A~ 499 (599)
T 1w6s_A 425 YKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTM-----ATAGDLVFYGTLDGYLKAR 499 (599)
T ss_dssp CCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCE-----EETTTEEEEECTTSEEEEE
T ss_pred ccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcce-----EecCCEEEEECCCCeEEEE
Confidence 24678999999998776654211100 001 1245678889999999999
Q ss_pred eCCCCcceEEeeCCCCCe-eEEEEcCCCCcEEEEEe
Q psy10566 545 HVKRELPIATLSGHTRTV-SCVAWNPVYHQMIASVS 579 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V-~~v~~sp~~~~~l~s~s 579 (604)
|.++|+.+.+++...+.+ .-+.|..++..++++.+
T Consensus 500 D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 500 DSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 999999998886543222 23555566444555543
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.42 E-value=5.3e-05 Score=70.21 Aligned_cols=170 Identities=10% Similarity=-0.041 Sum_probs=113.6
Q ss_pred eEeeEEeccCC--CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC
Q psy10566 337 CQHRKTLEGHT--LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 337 ~~~~~~l~~h~--~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
.+.+.++. |. .-...+.|++ +..+.+.+.++...|+.+|+.+++............-..+++. .++.++..-.++
T Consensus 9 ~~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~ 85 (243)
T 3mbr_X 9 YRVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSS
T ss_pred eEEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCC
Confidence 34555553 54 3456899987 5666677776556899999999999888764322222334443 233444455678
Q ss_pred eEEEEEc-CCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---C---CCeeEEEECCCCCEE
Q psy10566 415 QFYQCDI-EGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---D---HPVMSFTIDATDRLA 487 (604)
Q Consensus 415 ~i~iwd~-~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~---~~i~~~~~s~~~~~l 487 (604)
.+.+||. +.+.+..+.... ....+.++++.++++..++.|.++|..+.+....+.- . ..++.+.+. +|+..
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEEECCcCcEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 9999999 466666665321 2334456788888888899999999998766554432 1 234455554 56544
Q ss_pred EEEecCCeEEEEecCCCceeeEee
Q psy10566 488 LLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
+....+..|.+.|.++++.+..+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEE
T ss_pred EEECCCCeEEEEECCCCCEEEEEE
Confidence 444468899999999999988876
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.9e-05 Score=72.60 Aligned_cols=184 Identities=11% Similarity=0.023 Sum_probs=120.7
Q ss_pred cceeecccCCC--cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeE--EEECCCCCeEEEEe
Q psy10566 292 ETTQVLNDHCD--EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAY--LAWSPDSSHLLVVG 366 (604)
Q Consensus 292 ~~~~~l~~H~~--~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~--l~~spd~~~l~s~~ 366 (604)
+.++++ .|.. -...+.|+ ++.++.+.+.+|.|+++|+.+ ++....+ .. .... +++ +++.|....
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~T----gkv~~~~l~~---~~FgeGit~--~g~~Ly~lt 112 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLES----AQPVWMERLG---NIFAEGLAS--DGERLYQLT 112 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSC----SSCSEEEECT---TCCEEEEEE--CSSCEEEEE
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCC----CcEEeEECCC---CcceeEEEE--eCCEEEEEE
Confidence 445555 3443 34788888 466777888889999999983 3333333 32 2333 444 445555555
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec----e---eEEEEE
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG----V---RVNCLW 438 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~----~---~v~~l~ 438 (604)
..+ +.+.+||..+.+.+.++.....+ ..++ ++++.|+.+..++.|.++|.. .+.+..+.- . .++.+.
T Consensus 113 w~~-~~v~V~D~~Tl~~~~ti~~~~eG--wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 113 WTE-GLLFTWSGMPPQRERTTRYSGEG--WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELE 187 (268)
T ss_dssp SSS-CEEEEEETTTTEEEEEEECSSCC--CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred ccC-CEEEEEECCcCcEEEEEeCCCce--eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccE
Confidence 443 38999999999999888754322 3333 578888888788999999985 455554432 1 346666
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCcccccccC--------------CCCeeEEEECCCCCEEEEEec
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE--------------DHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~--------------~~~i~~~~~s~~~~~l~~~~~ 492 (604)
+. +|...+..-.+..|.+.|..+++....+.. ..-.+.++++|+++.|++.+.
T Consensus 188 ~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 188 CA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred Ee-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 66 675554444678999999998865544331 235689999998877776654
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=0.0001 Score=78.87 Aligned_cols=260 Identities=12% Similarity=0.093 Sum_probs=150.8
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC--Cee---EEEEC-CCCC-eEEEEeC------CCceEEEEEECC
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL--GVA---YLAWS-PDSS-HLLVVGP------EDCHELWVWNIE 379 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~--~V~---~l~~s-pd~~-~l~s~~~------d~~~~i~vwd~~ 379 (604)
+..++.++.|+.|.-+|..++.... ......+.. .+. .+.=. .+++ .+++++. ++ .|+.+|..
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W--~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g--~v~alD~~ 192 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVW--KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVG--RLFARDPD 192 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEE--EEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBC--EEEEECTT
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEe--eecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCC--EEEEEECC
Confidence 4567778889999999988322222 222222110 111 11101 1233 4555442 44 89999999
Q ss_pred CceEEEEecCCCC----------------------------------------CCeEEEEEecCCCEEEEEec-------
Q psy10566 380 TELLRVKLNHSPE----------------------------------------DSLTSCSWNRDGTKFVCGGI------- 412 (604)
Q Consensus 380 ~~~~~~~~~~~~~----------------------------------------~~v~~~~~~~~~~~l~s~~~------- 412 (604)
+|+.+-....... ..-..+++.|+...++.+..
T Consensus 193 tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~ 272 (582)
T 1flg_A 193 TGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNT 272 (582)
T ss_dssp TCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCG
T ss_pred CCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccC
Confidence 9987765432100 00023566677777776653
Q ss_pred -------------C----CeEEEEEc-CCCeeeeeec--e---------eEEEEEEc-CCCC---EEEEEeCCCeEEEEE
Q psy10566 413 -------------R----GQFYQCDI-EGQVLDSWEG--V---------RVNCLWCR-SDGK---SVLAADTHHRIRTYN 459 (604)
Q Consensus 413 -------------d----g~i~iwd~-~~~~~~~~~~--~---------~v~~l~~s-~~g~---~l~~~~~dg~I~i~d 459 (604)
| +.|..+|. +|+..-.+.. + ...-+... .+|+ .++.++.+|.++++|
T Consensus 273 ~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 273 WARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred cccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 57888998 5777655532 1 01111221 4674 678899999999999
Q ss_pred cCCCcccccccCCC----------------------------------------------CeeEEEECCCCCEEEEEe--
Q psy10566 460 FEHLTDSNLLQEDH----------------------------------------------PVMSFTIDATDRLALLNV-- 491 (604)
Q Consensus 460 ~~~~~~~~~~~~~~----------------------------------------------~i~~~~~s~~~~~l~~~~-- 491 (604)
..+++......... .-..++++|+...+++..
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 88765432211100 011356677666666543
Q ss_pred -------------------------------cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 492 -------------------------------STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 492 -------------------------------~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
.+|.|..||+.+++.+-++.......... + ...+.+++.|+.||.
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~--~--~tagglvf~g~~dg~ 508 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGV--L--ATAGNLVFTGTGDGY 508 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCC--E--EETTTEEEEECTTSE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccc--e--EeCCCEEEEECCCCc
Confidence 25789999999998876655322110000 0 123567888999999
Q ss_pred EEEEeCCCCcceEEeeCCCCCe-eEEEEcCCCCcEEEEEeC
Q psy10566 541 VYIWHVKRELPIATLSGHTRTV-SCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V-~~v~~sp~~~~~l~s~s~ 580 (604)
++.||.++|+.+..++...+.+ .-+.|..++..++++.+.
T Consensus 509 l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 509 FKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred EEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 9999999999999887654322 226666674445555443
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.35 E-value=0.0014 Score=64.51 Aligned_cols=273 Identities=8% Similarity=-0.005 Sum_probs=147.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE-eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT-LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~-l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
..+.+|.|.+++..+++ +.+|.| |...+...+.+.+.. .......+.+|.|.+ + .+++++..+ .|+. ..+.
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g--~i~~-S~Dg 107 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPP--IMLH-TTDG 107 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETT--EEEE-ESST
T ss_pred CcEEEEEECCCCcEEEE-cCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCC--eEEE-ECCC
Confidence 47999999888887775 457765 333322233433321 112344688999986 3 344455555 3433 3333
Q ss_pred ceEEEEecC--CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 381 ELLRVKLNH--SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 381 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
|+.-..... .....+..+.+.+++..++++ .+|.|..-.=.|+....... ..+..+.+.+++..++++...+..
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 443222221 123457788887777655554 45654332112443333221 257788999988877666444333
Q ss_pred EEEEc--CCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc-ccceEEEEeeeCCCCCcEE
Q psy10566 456 RTYNF--EHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 456 ~i~d~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l 532 (604)
+-.|- .+-... .......+..+.+.+++..+ +.+.+|.+++.+...++....+... ......+..+.+.+++.++
T Consensus 187 ~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (327)
T 2xbg_A 187 STWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW 264 (327)
T ss_dssp EEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred EEeCCCCCceeEC-CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence 33442 111111 11234578889999988765 4456787777643334333322211 0000112223334566666
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSG---HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+++ .+|.| .+..+.|+.-..+.. +...+.++.|.++ ..++.++.+|.|.-++-
T Consensus 265 ~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~--~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 265 LAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP--DQGFILGQKGILLRYVT 320 (327)
T ss_dssp EEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET--TEEEEECSTTEEEEECC
T ss_pred EEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC--CceEEEcCCceEEEEcC
Confidence 665 47777 455565655555542 3456889999754 45667788998877765
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.33 E-value=0.00021 Score=70.16 Aligned_cols=228 Identities=7% Similarity=-0.054 Sum_probs=141.2
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEE-EEecCCCCCCeEEEEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLR-VKLNHSPEDSLTSCSW 400 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~-~~~~~~~~~~v~~~~~ 400 (604)
...|+..+++....... ..+. ....+.+++|.+.+..|..+...+ ..|+.++...+... ..+. ..-.....+++
T Consensus 12 ~~~I~~i~l~~~~~~~~--~~~~-~~~~~~~ld~d~~~~~lyw~D~~~-~~I~r~~~~g~~~~~~~~~-~~l~~p~glav 86 (318)
T 3sov_A 12 RRDLRLVDATNGKENAT--IVVG-GLEDAAAVDFVFSHGLIYWSDVSE-EAIKRTEFNKTESVQNVVV-SGLLSPDGLAC 86 (318)
T ss_dssp EEEEEEEETTCTTSCCE--EEEE-EEEEEEEEEEEGGGTEEEEEETTT-TEEEEEETTSSSCCCEEEE-ECCSCCCEEEE
T ss_pred cCeEEEEECCCCceEEE--EEec-CCCccEEEEEEeCCCEEEEEECCC-CcEEEEEccCCCceEEEEc-CCCCCccEEEE
Confidence 45788888873221111 1111 123467899998766666665544 38999998776321 1111 11234678899
Q ss_pred ecCC-CEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccccc-CCC
Q psy10566 401 NRDG-TKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNLLQ-EDH 473 (604)
Q Consensus 401 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~~~-~~~ 473 (604)
.+.+ ..+++-...+.|.+++++|.....+. ......+++.|.+..++.+.. .+.|..++........+.. .-.
T Consensus 87 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~ 166 (318)
T 3sov_A 87 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 166 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred EcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 8754 45555556789999999876544442 135789999997777766663 5789998887544333332 234
Q ss_pred CeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 474 PVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
....+++++++..|+.+. ..+.|..+|+..........+.......+.. ..+.++++-...+.|..++..+|+..
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav----~~~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL----FEDILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE----ETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE----eCCEEEEEecCCCeEEEEECCCCCce
Confidence 578999999777666654 4678999998653322222222233333332 13456666667889999999888877
Q ss_pred EEeeCC
Q psy10566 553 ATLSGH 558 (604)
Q Consensus 553 ~~l~~h 558 (604)
..+...
T Consensus 243 ~~i~~~ 248 (318)
T 3sov_A 243 REIHSD 248 (318)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 666543
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=0.00012 Score=78.34 Aligned_cols=230 Identities=9% Similarity=0.031 Sum_probs=137.7
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCC---CeE-EEEEec---CCC-EEEEEec------CCeEEEEEc-CC
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPED---SLT-SCSWNR---DGT-KFVCGGI------RGQFYQCDI-EG 423 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~---~v~-~~~~~~---~~~-~l~s~~~------dg~i~iwd~-~~ 423 (604)
+..+++++.++ .|..+|..+|+.+-........ .+. .-.... +++ .+++++. ++.|..+|. +|
T Consensus 117 ~~~v~~~t~dg--~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDA--SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTT--EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CCEEEEEeCCC--EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 45677777787 8999999999987766532210 111 111111 233 5666543 789999998 57
Q ss_pred Ceeeeeecee--E-----------------------------------------EEEEEcCCCCEEEEEeC---------
Q psy10566 424 QVLDSWEGVR--V-----------------------------------------NCLWCRSDGKSVLAADT--------- 451 (604)
Q Consensus 424 ~~~~~~~~~~--v-----------------------------------------~~l~~s~~g~~l~~~~~--------- 451 (604)
+.+-...... + ...++.++...++.+..
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 6654433210 0 12355566677776663
Q ss_pred -----------C----CeEEEEEcCCCcccccccCC-----------CCeeEEEEC-CCCC---EEEEEecCCeEEEEec
Q psy10566 452 -----------H----HRIRTYNFEHLTDSNLLQED-----------HPVMSFTID-ATDR---LALLNVSTQGVHLWDL 501 (604)
Q Consensus 452 -----------d----g~I~i~d~~~~~~~~~~~~~-----------~~i~~~~~s-~~~~---~l~~~~~dg~I~lwd~ 501 (604)
| +.|..+|..+++.....+.. .++. +... .+|+ .++.++.+|.++++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 58999999988776554321 1121 2221 4664 7888999999999999
Q ss_pred CCCceeeEeecccc------------c-------------------eEEEE-----------eeeCCCCCcEEEEEe---
Q psy10566 502 RDRILLRKFQGVTQ------------G-------------------QFTIH-----------SCFGGANQDFVASGS--- 536 (604)
Q Consensus 502 ~~~~~~~~~~~~~~------------~-------------------~~~i~-----------~~~~~~~~~~l~sgs--- 536 (604)
.+++.+..+..... . ...+. ...++|+...+++..
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 99988766543210 0 00000 011223333333322
Q ss_pred ------------------------------CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 537 ------------------------------EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 537 ------------------------------~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
.+|.|+.||..+|+.+.+...+. ++..-..... +.+++.++.||.++.
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~ta-gglvf~g~~dg~l~A 511 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATA-GNLVFTGTGDGYFKA 511 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEET-TTEEEEECTTSEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeC-CCEEEEECCCCcEEE
Confidence 26889999999999887766432 2221111122 457777999999999
Q ss_pred ECCCCCC
Q psy10566 587 WGPHLNT 593 (604)
Q Consensus 587 W~~~~~~ 593 (604)
||.++++
T Consensus 512 ~D~~tG~ 518 (582)
T 1flg_A 512 FDAKSGK 518 (582)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9999887
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.30 E-value=0.0011 Score=65.90 Aligned_cols=233 Identities=6% Similarity=-0.064 Sum_probs=142.5
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEGQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~ 428 (604)
.+|.+..+ ..+|+.+... .|+..++.......... ....+..++|++....|+.+ ...+.|..+++++.....
T Consensus 36 ~~C~~~~~-~~~ll~~~~~---~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 36 RSCKALGP-EPVLLFANRI---DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp SCEEESSS-CCEEEEECBS---CEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred Cccccccc-CceeEeeccc---ceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 34555555 3355554444 48888887765544443 23458899999866655544 467889999997765444
Q ss_pred eec---eeEEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEec-C-CeEEEEec
Q psy10566 429 WEG---VRVNCLWCRSDGKSVL-AADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVS-T-QGVHLWDL 501 (604)
Q Consensus 429 ~~~---~~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-d-g~I~lwd~ 501 (604)
+.. .....+++.+.+..++ +-...+.|.+++........... .......++++|.+..|+.+.. . +.|..+++
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 322 2467889987655554 44556889999987654443332 3356789999997766665544 4 77888887
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
............-... ..+.++++ +.+.++-+..+.|..+|+........+........++++. . +.++++-..
T Consensus 190 dG~~~~~~~~~~~~~P---nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~-~~ly~td~~ 264 (349)
T 3v64_C 190 DGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-E-DSLYWTDWH 264 (349)
T ss_dssp TSCSCEESCCSSCSCE---EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-T-TEEEEEETT
T ss_pred CCCCcEEEEECCCCCc---ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-C-CEEEEecCC
Confidence 6532222111111111 22334454 4455555567889999987544333344444567788884 3 567777777
Q ss_pred CCcEEEECCCCCC
Q psy10566 581 DCTVRIWGPHLNT 593 (604)
Q Consensus 581 Dg~I~iW~~~~~~ 593 (604)
.+.|...+..++.
T Consensus 265 ~~~V~~~~~~~G~ 277 (349)
T 3v64_C 265 TKSINSANKFTGK 277 (349)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEEccCCC
Confidence 7888888755544
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00065 Score=68.71 Aligned_cols=232 Identities=6% Similarity=-0.068 Sum_probs=143.8
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCeeeee
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV-CGGIRGQFYQCDIEGQVLDSW 429 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~ 429 (604)
.|.+..+ ..+|+.+... .|+.+++.......... ....+..++|++.+..|+ +-...+.|..+++++.....+
T Consensus 80 ~C~~~~~-~~~l~~~~~~---~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRI---DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp CEEECSS-CCEEEEECBS---CEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred eECCccc-cceeEeecCc---cceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 4444445 3455555544 48889988766544443 234588999998655555 445668999999987654443
Q ss_pred ec---eeEEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEec-C-CeEEEEecC
Q psy10566 430 EG---VRVNCLWCRSDGKSVL-AADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVS-T-QGVHLWDLR 502 (604)
Q Consensus 430 ~~---~~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-d-g~I~lwd~~ 502 (604)
.. .....+++.+.+..|+ +-...+.|.++++.......+.. .......++++|.+..|+.+.. . +.|..+++.
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 22 2456788887655554 44556789998887654433333 2356789999997777666654 3 678888876
Q ss_pred CCceeeEeeccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
................. +.++++ +.+.++-+..+.|..+|+........+........++++. . +.++++-...
T Consensus 234 G~~~~~~~~~~~~~PnG---lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~-~~ly~td~~~ 308 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNG---LTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-E-DSLYWTDWHT 308 (386)
T ss_dssp SCSCEEEECSSCSCEEE---EEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-T-TEEEEEETTT
T ss_pred CCCcEEEEECCCCCeee---EEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-C-CEEEEeeCCC
Confidence 54332222211111222 333444 4455555567889999987544333444344567888884 3 5777777778
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
+.|..++..++.
T Consensus 309 ~~V~~~~~~~G~ 320 (386)
T 3v65_B 309 KSINSANKFTGK 320 (386)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEECCCCc
Confidence 888888855544
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.28 E-value=0.0017 Score=63.66 Aligned_cols=221 Identities=5% Similarity=-0.062 Sum_probs=136.9
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCC----Ceeee-ee-c-e
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEG----QVLDS-WE-G-V 432 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~----~~~~~-~~-~-~ 432 (604)
+|+.+.... |+..|+.+......+. ....+..++|++.+..++.+ ...+.|..+++++ ..... +. + .
T Consensus 3 ~ll~~~~~~---I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 3 YLFFTNRHE---VRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp EEEEECBSS---EEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred EEEEECCCe---EEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 455555554 8999998876555443 23568899999876555544 4568999999876 32222 22 1 2
Q ss_pred eEEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecC--CeEEEEecCCCceee
Q psy10566 433 RVNCLWCRSDGKSVL-AADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVST--QGVHLWDLRDRILLR 508 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~d--g~I~lwd~~~~~~~~ 508 (604)
....+++.+.+..++ +-...+.|.+++........+.. .......++++|.+..++.+... +.|..+++... ...
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeE
Confidence 567889987555554 44567899999987654433333 34567899999977766666543 68888887543 333
Q ss_pred Eee-ccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCCcceEEe-eC--CCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 509 KFQ-GVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRELPIATL-SG--HTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 509 ~~~-~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~~~~~~l-~~--h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
.+. ..-.. ...+.+++++. +.++-+..+.|..+|..... ...+ .. .-....++++.. +.++++-...+.
T Consensus 157 ~~~~~~~~~---P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~~--~~ly~~d~~~~~ 230 (316)
T 1ijq_A 157 SLVTENIQW---PNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEA 230 (316)
T ss_dssp EEECSSCSC---EEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET--TEEEEEETTTTE
T ss_pred EEEECCCCC---ceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEEC--CEEEEEECCCCe
Confidence 222 11111 22233445544 44555567899999987433 3333 22 234567888853 577777777888
Q ss_pred EEEECCCCCC
Q psy10566 584 VRIWGPHLNT 593 (604)
Q Consensus 584 I~iW~~~~~~ 593 (604)
|..++..+++
T Consensus 231 V~~~~~~~g~ 240 (316)
T 1ijq_A 231 IFSANRLTGS 240 (316)
T ss_dssp EEEEETTTCC
T ss_pred EEEEeCCCCc
Confidence 9988876654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.28 E-value=0.00056 Score=64.24 Aligned_cols=203 Identities=12% Similarity=0.124 Sum_probs=130.3
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
+.+.+-...+..++|+|++..|+++.... +.|...|.. ++....+..........+++.+++.++++.-.++.+.+++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~-~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKP-AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETT-EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCC-CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 46667767899999999988777766554 589999998 8777777544345688999999888777766778899998
Q ss_pred cC--CC--eeeeee--------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---cccccc--------cCCCCeeE
Q psy10566 421 IE--GQ--VLDSWE--------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL---TDSNLL--------QEDHPVMS 477 (604)
Q Consensus 421 ~~--~~--~~~~~~--------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~---~~~~~~--------~~~~~i~~ 477 (604)
+. +. .+.... ......++++|.++.++++.......+|.+... ...... .....+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 74 32 112221 113589999999988888777665555555421 011111 12345789
Q ss_pred EEECCCCCEEE-EEecCCeEEEEecCCCceeeEeecccc------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 478 FTIDATDRLAL-LNVSTQGVHLWDLRDRILLRKFQGVTQ------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 478 ~~~s~~~~~l~-~~~~dg~I~lwd~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++++|....++ .+.....+..+|.. ++.+..+.-..+ ....-.-+++.++|++.++ ++-+.++++...
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 99999765555 45556778889965 445554442211 0111222444688875444 777777777644
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.27 E-value=0.00044 Score=71.39 Aligned_cols=241 Identities=13% Similarity=0.140 Sum_probs=148.1
Q ss_pred eeEEEECC-CCCeEEEEeCCCceEEEEEECCCceEEEEecCC--CCCCeEEEEE-------ecCCCEEEEEecCC-----
Q psy10566 350 VAYLAWSP-DSSHLLVVGPEDCHELWVWNIETELLRVKLNHS--PEDSLTSCSW-------NRDGTKFVCGGIRG----- 414 (604)
Q Consensus 350 V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~-------~~~~~~l~s~~~dg----- 414 (604)
...|+|+| ++..|+.+...+ ..|++.|..++........+ .......++| ++++..++++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~-~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGH-KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETE-EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCC-CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 56899999 455666665543 47999999988776655432 1235889999 99999777776554
Q ss_pred --eEEEEEcCC--Cee-----eeee-ceeEEEEEEcCC-CCEEEEEeCCCeEEEEEcC-------CCcc------c----
Q psy10566 415 --QFYQCDIEG--QVL-----DSWE-GVRVNCLWCRSD-GKSVLAADTHHRIRTYNFE-------HLTD------S---- 466 (604)
Q Consensus 415 --~i~iwd~~~--~~~-----~~~~-~~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~-------~~~~------~---- 466 (604)
.|.+++... ... ..+. ......++++|+ +..+++-..++.|..+|+. ++.. .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 366665432 221 1121 124567788995 4545556677889999987 4432 0
Q ss_pred --cc--ccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecC--CCce--eeEeecc---cc---------c-eEEEEeee
Q psy10566 467 --NL--LQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLR--DRIL--LRKFQGV---TQ---------G-QFTIHSCF 524 (604)
Q Consensus 467 --~~--~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~--~~~~--~~~~~~~---~~---------~-~~~i~~~~ 524 (604)
.+ .........++++|+++.|+++ +..+.|+.++.. .+.. ...+.+. .+ . ...-..++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 11 1223456799999999965555 456789986654 3322 1233221 00 0 00110122
Q ss_pred CC-------CCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC------------------------CCCeeEEEEcCCCCc
Q psy10566 525 GG-------ANQDFVASGSEDGKVYIWHVKRELPIATLSGH------------------------TRTVSCVAWNPVYHQ 573 (604)
Q Consensus 525 ~~-------~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h------------------------~~~V~~v~~sp~~~~ 573 (604)
.. .++.++++-..+++|+.++ .+|. +.++.+. -.....|+++++++.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 22 4567777777788999998 4563 4455332 023678999986467
Q ss_pred EEEEEeCCCcEEEECCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++++=.....||.++++...
T Consensus 458 lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC
T ss_pred EEEEeCCCCEEEEEECCCCc
Confidence 77777778899999887643
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.25 E-value=2.2e-05 Score=85.71 Aligned_cols=242 Identities=11% Similarity=-0.001 Sum_probs=140.0
Q ss_pred eEEEECC-CCCeEEEEeCCCc---------eEEEEEECCCceEE--EEecCCCCCCeEEEEEecCCCEEEEEec-CCeEE
Q psy10566 351 AYLAWSP-DSSHLLVVGPEDC---------HELWVWNIETELLR--VKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFY 417 (604)
Q Consensus 351 ~~l~~sp-d~~~l~s~~~d~~---------~~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~ 417 (604)
.++++.| +++.++.+|.+.. ..+.+||..+++.. ......+.....++++..+++.+++|+. +..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3566777 8888888875431 26899999887632 2222223333456788889999999985 45899
Q ss_pred EEEcCCCeeeeeec---ee-EEEEEEcCCCCEEEEEe-CC-----CeEEEEEcCCCcccccc-----cCCCCeeEEEECC
Q psy10566 418 QCDIEGQVLDSWEG---VR-VNCLWCRSDGKSVLAAD-TH-----HRIRTYNFEHLTDSNLL-----QEDHPVMSFTIDA 482 (604)
Q Consensus 418 iwd~~~~~~~~~~~---~~-v~~l~~s~~g~~l~~~~-~d-----g~I~i~d~~~~~~~~~~-----~~~~~i~~~~~s~ 482 (604)
+||........... .+ -.++++.++++.++.|+ .+ ..+.+||..+..-.... .....-....+..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99986544333222 12 23455667999999988 34 56999998775432210 0000000112234
Q ss_pred CCCEEEEEecC---------CeEEEEecCCCceeeEeecccc-------ceEEEEeeeCCCCCcEEEEEeCCC-------
Q psy10566 483 TDRLALLNVST---------QGVHLWDLRDRILLRKFQGVTQ-------GQFTIHSCFGGANQDFVASGSEDG------- 539 (604)
Q Consensus 483 ~~~~l~~~~~d---------g~I~lwd~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~sgs~dg------- 539 (604)
++..++.++.+ ..+..||..+............ .......++...++++++.|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 55555666544 3577888877654332221111 000111111124788888888543
Q ss_pred ----cEEEEeCCCCcceEEe--eCCCCCe-eEEEEcCCCCcEEEEEeCC-----------CcEEEECCCCCC
Q psy10566 540 ----KVYIWHVKRELPIATL--SGHTRTV-SCVAWNPVYHQMIASVSDD-----------CTVRIWGPHLNT 593 (604)
Q Consensus 540 ----~I~iwd~~~~~~~~~l--~~h~~~V-~~v~~sp~~~~~l~s~s~D-----------g~I~iW~~~~~~ 593 (604)
.|.+||..+..-.... ..+.... .+++..|+ +.+++.||.+ ..+.+||+.+.+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~-g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPD-GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTT-SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCC-CCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 6888888776543332 2222222 34456677 7888888864 468899987654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00062 Score=63.94 Aligned_cols=197 Identities=8% Similarity=0.060 Sum_probs=125.5
Q ss_pred eecccCCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEe--ccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTL--EGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l--~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+.+.|-.+.+..++|+|++..| ++...++.|...|.. +.....+ .+ ......|++.+++.++++.-.++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-----g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~-- 91 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-----GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDY-- 91 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-----CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTT--
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-----CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCC--
Confidence 4566666789999999987644 456677777777765 2233333 33 24578899999987666654554
Q ss_pred EEEEEECCCceE---EEEec-----CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC----Ceeeeee---------
Q psy10566 372 ELWVWNIETELL---RVKLN-----HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG----QVLDSWE--------- 430 (604)
Q Consensus 372 ~i~vwd~~~~~~---~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~--------- 430 (604)
.+.++++..... ..... ...+.....++|+|.++.|+++.......+|.+++ ..+....
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred cEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Confidence 788888765431 22221 12345578999999998888887766556665543 1122111
Q ss_pred ceeEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcccccccC----------CCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 431 GVRVNCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDSNLLQE----------DHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 431 ~~~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~~~~~----------~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
-.....+++.|... .++.......+..+|.... ....+.- -.....++++++|+ +++.+..+.++.|
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f 249 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRF 249 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEE
Confidence 11467889998654 4555566677888887754 2222111 13568999999998 4555677777776
Q ss_pred ec
Q psy10566 500 DL 501 (604)
Q Consensus 500 d~ 501 (604)
.-
T Consensus 250 ~~ 251 (255)
T 3qqz_A 250 TP 251 (255)
T ss_dssp EC
T ss_pred Ee
Confidence 53
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.20 E-value=0.0026 Score=64.57 Aligned_cols=212 Identities=7% Similarity=-0.055 Sum_probs=134.8
Q ss_pred CCCcEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
....+..++|++.+..|. +-...+.|..++++...........+.........+++.+.+..|..+.... ..|.+.++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~-~~I~~~~~ 188 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-GTVSVADT 188 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTT-TEEEEECT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCC-CeEEEEeC
Confidence 446788999998655444 4445678888887621100112222332345678899988655565555433 38999998
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H 452 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d 452 (604)
+.......+. ........+++.|.+..|+.+.. .+.|...+++|.....+.. .....+++++++..|+.+.. .
T Consensus 189 ~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 189 KGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 8765444443 22345789999997666665543 3789999998866554422 36789999988877777654 5
Q ss_pred CeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 453 HRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
+.|..+|+.......+... ......+++. .+..+++....+.|..+|..+++.+..+....
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENL 331 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSC
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCC
Confidence 7899999876544443332 2345566663 34455555667789999988887776665433
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00027 Score=72.60 Aligned_cols=235 Identities=13% Similarity=0.119 Sum_probs=141.1
Q ss_pred CeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEc
Q psy10566 349 GVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDI 421 (604)
Q Consensus 349 ~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~ 421 (604)
....++|+|+ +..|..+...+ .|+.+|..++....... .......++|+++|+ |+++...+ .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~--~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRD--AFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTS--CEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCC--CEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4678999995 44565555544 79999998887665543 345689999999999 44444321 2333343
Q ss_pred CCCee--eee-eceeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCcc-ccccc--CCCCeeEEEECCCCCEEEEEe-cC
Q psy10566 422 EGQVL--DSW-EGVRVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLTD-SNLLQ--EDHPVMSFTIDATDRLALLNV-ST 493 (604)
Q Consensus 422 ~~~~~--~~~-~~~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~-~~~~~--~~~~i~~~~~s~~~~~l~~~~-~d 493 (604)
.+... ... .......+++.+ +|...++-..++.|+.+|..++.. ..... .......++++|+++.|+++. ..
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 32211 111 122456788999 666665656678899999875544 22221 122334699999999655554 56
Q ss_pred CeEEEEecC--CCce--eeEeecccc------------ceEEEEeeeC---------CCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 494 QGVHLWDLR--DRIL--LRKFQGVTQ------------GQFTIHSCFG---------GANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 494 g~I~lwd~~--~~~~--~~~~~~~~~------------~~~~i~~~~~---------~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+.|+.++.. ++.. ...+.+... .......+.+ ..+|++.++-...+.|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 789998865 2321 122222100 0000111222 466777777777889999985 4
Q ss_pred CcceEEeeCC------------------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 549 ELPIATLSGH------------------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 549 ~~~~~~l~~h------------------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|. +.++.+. -.....|+++|.++.++++-...+.|+..+++
T Consensus 374 G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 374 GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 54 3333322 12367899994437777777778888887764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.14 E-value=0.00017 Score=79.95 Aligned_cols=189 Identities=13% Similarity=0.092 Sum_probs=113.1
Q ss_pred CeEEEEEe-cCCCEEEEEecC-C----eEEEEEcCCC-e-ee-eeeceeEEEEEEcCCCCEEEEEeCC-----CeEEEEE
Q psy10566 394 SLTSCSWN-RDGTKFVCGGIR-G----QFYQCDIEGQ-V-LD-SWEGVRVNCLWCRSDGKSVLAADTH-----HRIRTYN 459 (604)
Q Consensus 394 ~v~~~~~~-~~~~~l~s~~~d-g----~i~iwd~~~~-~-~~-~~~~~~v~~l~~s~~g~~l~~~~~d-----g~I~i~d 459 (604)
.+...+|+ |||++++.+... | .|+++|+++. . +. .+.. ....++|+|||+.|+....+ ..|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 46788999 999988865442 2 5999999644 3 21 1111 23467899999988887765 3688888
Q ss_pred cCCCccc--cccc--CCCCeeEEEECCCCCEEEEEec---CCeEEEEecCCCc-ee--eEee-ccccceEEEEeeeCCCC
Q psy10566 460 FEHLTDS--NLLQ--EDHPVMSFTIDATDRLALLNVS---TQGVHLWDLRDRI-LL--RKFQ-GVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 460 ~~~~~~~--~~~~--~~~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~~~~-~~--~~~~-~~~~~~~~i~~~~~~~~ 528 (604)
+.+.... .+.. .......+.++|||++|+.... ...|+++|+.++. .. ..+. ......+.+. +..+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~---~~~g 330 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ---MHGT 330 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE---EETT
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe---eeeC
Confidence 8775432 2222 2234567899999999887764 3468999998752 22 3332 2222223321 1123
Q ss_pred CcEEEEEeCC----CcEEEEeCCCCcceEE-eeCCCC--CeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 529 QDFVASGSED----GKVYIWHVKRELPIAT-LSGHTR--TVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 529 ~~~l~sgs~d----g~I~iwd~~~~~~~~~-l~~h~~--~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+.+++....+ ..|+.+|+.++..... +..|.. .+..+.+. ++.++++...||..++|-
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEE
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEE
Confidence 3344444333 3677788765322222 333433 34556655 357788888888755553
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00062 Score=69.91 Aligned_cols=153 Identities=11% Similarity=0.160 Sum_probs=96.0
Q ss_pred cEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---ceEEEEEEC
Q psy10566 303 EVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---CHELWVWNI 378 (604)
Q Consensus 303 ~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~ 378 (604)
....++|+| ++..|..+...+.|+.+|.+ .... ..+.........++|+++++.|+++...+ ...+..++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~--~~~v---~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFE--KEYV---STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETT--TTEE---EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECC--CCEE---EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 567899998 45556555555788888876 2222 22222445688999999999666665522 113444443
Q ss_pred CCceE-EEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeee---c-eeEEEEEEcCCCCEEEEE-eC
Q psy10566 379 ETELL-RVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWE---G-VRVNCLWCRSDGKSVLAA-DT 451 (604)
Q Consensus 379 ~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~-~~v~~l~~s~~g~~l~~~-~~ 451 (604)
..... ...+. .......++++| ++..+++-..++.|..++.++.....+. . .....++++|+|++++.+ ..
T Consensus 213 ~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 32211 11111 123456788999 6776666667789999999766542221 1 246789999999955554 56
Q ss_pred CCeEEEEEcCC
Q psy10566 452 HHRIRTYNFEH 462 (604)
Q Consensus 452 dg~I~i~d~~~ 462 (604)
.+.|..++...
T Consensus 291 ~~~I~~~~~d~ 301 (430)
T 3tc9_A 291 QHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEEEET
T ss_pred CCEEEEEeCCc
Confidence 78899988653
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.0025 Score=70.32 Aligned_cols=224 Identities=8% Similarity=-0.010 Sum_probs=140.2
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc----eEEEEecCCCCCCeEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE----LLRVKLNHSPEDSLTS 397 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~----~~~~~~~~~~~~~v~~ 397 (604)
...|+..++.. .. . ..+......+..|+|.+.+..|+.+.... ..|+.+++... .....+. ........
T Consensus 403 ~~~Ir~i~l~~--~~--~-~~l~~~~~~~~gl~~d~~~~~lY~sD~~~-~~I~~~~l~g~~~~~~~~~vi~-~~l~~P~G 475 (791)
T 3m0c_C 403 RHEVRKMTLDR--SE--Y-TSLIPNLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-RDIQAPDG 475 (791)
T ss_dssp BSSEEEECTTS--CC--C-EEEECSCSSEEEEEEETTTTEEEEEETTT-TEEEEEEC--------CEEEEC-SSCSCCCE
T ss_pred ccceeEeeccC--Cc--c-eeeecCCCceEEEeecccCCeeEEeeccc-eeEEEEeccCCCCCcceeEEEe-cCCCCcce
Confidence 34577777652 11 1 22222345678999998766666655543 37999988753 2222222 22345678
Q ss_pred EEEecCCCEE-EEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCcccccccC
Q psy10566 398 CSWNRDGTKF-VCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTH--HRIRTYNFEHLTDSNLLQE 471 (604)
Q Consensus 398 ~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~d--g~I~i~d~~~~~~~~~~~~ 471 (604)
+++.+.+..| ++-...+.|.+.+++|.....+.. .....|++.|.+..|+.+... +.|...++.......+...
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 9999877554 455567899999998876655532 358899999987777766542 6899999876554444443
Q ss_pred -CCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeecc--ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 472 -DHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGV--TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 472 -~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
-.....+++++.+..|+.+. ..+.|..+++........+... ......+. . ..+.++++-...+.|...|..
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gla--v--~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA--V--FEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE--E--ETTEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEE--E--eCCEEEEEECCCCEEEEEeCC
Confidence 35788999998777776664 4568999998654443333321 12223332 2 234555666667889999988
Q ss_pred CCcceEEee
Q psy10566 548 RELPIATLS 556 (604)
Q Consensus 548 ~~~~~~~l~ 556 (604)
+|+.+..+.
T Consensus 632 tG~~~~~l~ 640 (791)
T 3m0c_C 632 TGSDVNLLA 640 (791)
T ss_dssp TCCCCEEEE
T ss_pred CCcceEEee
Confidence 887666664
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.05 E-value=0.0013 Score=64.38 Aligned_cols=223 Identities=8% Similarity=-0.008 Sum_probs=135.6
Q ss_pred eEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCee--eee-ec-ee
Q psy10566 361 HLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQVL--DSW-EG-VR 433 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~--~~~-~~-~~ 433 (604)
+|+.+... .|+..++.... ....+. ....+..++|.+.+..| ++-...+.|..+++++... ... .+ ..
T Consensus 6 ~ll~~~~~---~I~~i~l~~~~~~~~~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 6 LLLYANRR---DLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp EEEEECEE---EEEEEETTCTTSCCEEEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred EEEEEccC---eEEEEECCCCceEEEEEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 44444433 58999987753 111111 11346789999855544 4555667899999876521 111 11 25
Q ss_pred EEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeE
Q psy10566 434 VNCLWCRSDGKSV-LAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRK 509 (604)
Q Consensus 434 v~~l~~s~~g~~l-~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~ 509 (604)
...+++.+.+..+ ++-...+.|.+++........+. ........++++|.+..|+.+.. .+.|..+++.... ...
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEE
Confidence 6678898755544 44456788999998765443333 33456789999998777776653 5788888876432 222
Q ss_pred e-eccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 510 F-QGVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 510 ~-~~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
+ ...-... ..+.++++ +.+.++-+..+.|..+|+........+.+......++++.. +.++++-...+.|..+
T Consensus 160 ~~~~~l~~P---nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 160 IINSEIYWP---NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILAC 234 (318)
T ss_dssp EECSSCSCE---EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEE
T ss_pred EEECCCCCc---cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEE
Confidence 2 1111111 22344554 44555555678999999874433333333445667888863 4677777777889999
Q ss_pred CCCCCCC
Q psy10566 588 GPHLNTN 594 (604)
Q Consensus 588 ~~~~~~~ 594 (604)
+..+++.
T Consensus 235 ~~~~G~~ 241 (318)
T 3sov_A 235 NKYTGEG 241 (318)
T ss_dssp ETTTCCS
T ss_pred ECCCCCc
Confidence 8876653
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=0.0088 Score=64.37 Aligned_cols=231 Identities=7% Similarity=-0.050 Sum_probs=147.9
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDS 394 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~ 394 (604)
+|+.+ ....|+..+++.. .......+. .-..+..++|++.+..|..+.... +.|+.+++........+..+ ...
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~--~~~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~-~~I~r~~~~g~~~~~v~~~g-~~~ 81 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETN--NNNVAIPLT-GVKEASALDFDVTDNRIYWTDISL-KTISRAFMNGSALEHVVEFG-LDY 81 (628)
T ss_dssp EEEEE-ETTEEEEEESSCT--TCEEECCCC-SCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEECSS-CSC
T ss_pred EEEEE-eCCcEEEEECCCC--CcceEEEcC-CCCceEEEEEECCCCEEEEEECCC-CeEEEEECCCCCcEEEEeCC-CCC
Confidence 44444 4567888888732 111111222 234678999999877777666543 38999998765443333322 235
Q ss_pred eEEEEEecCCCEE-EEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccc
Q psy10566 395 LTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNL 468 (604)
Q Consensus 395 v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~ 468 (604)
...+++.+.+..| ++-...+.|.+.+++|.....+. ......+++.|....++.... .+.|...++.......+
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE
Confidence 6789998765555 44455689999999876544332 235789999997666666653 56888888877655555
Q ss_pred ccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 469 LQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.........+++++++..|+.+. ..+.|..+|+..... ..+.........+. .+ .+.++++-...+.|...|..
T Consensus 162 ~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~gla--v~--~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 162 VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLT--QY--QDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEE--EE--TTEEEEEETTTTEEEEEETT
T ss_pred ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEE--EE--CCEEEEecCCCCEEEEEECC
Confidence 55566788999999877666665 467899999876433 33333233333332 22 24555665568899999987
Q ss_pred CCcceEEee
Q psy10566 548 RELPIATLS 556 (604)
Q Consensus 548 ~~~~~~~l~ 556 (604)
+|+....+.
T Consensus 237 tg~~~~~l~ 245 (628)
T 4a0p_A 237 SGQNRTIIQ 245 (628)
T ss_dssp TCCSCEEEE
T ss_pred CCCceEEEe
Confidence 776555543
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0007 Score=66.05 Aligned_cols=184 Identities=16% Similarity=0.263 Sum_probs=120.7
Q ss_pred CCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCC----CC---EEEEEeC---CCeEEEEEcC--CCcccccc-
Q psy10566 403 DGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSD----GK---SVLAADT---HHRIRTYNFE--HLTDSNLL- 469 (604)
Q Consensus 403 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~----g~---~l~~~~~---dg~I~i~d~~--~~~~~~~~- 469 (604)
....++.....+-+.+||++|+.+..+...+++.+..-|+ |+ .+++... +++|.+|++. +.+....-
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 4456666777789999999999999887666666666553 22 2333333 5789999773 33222221
Q ss_pred -----cCC-CCeeEEEE--CCC-CC-EEEEEecCCeEEEEecC-------CCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 470 -----QED-HPVMSFTI--DAT-DR-LALLNVSTQGVHLWDLR-------DRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 470 -----~~~-~~i~~~~~--s~~-~~-~l~~~~~dg~I~lwd~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
... ..+..+++ +|. +. ++++...+|.+..|++. +.+.+++|....+ +..|...+....|
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq----~EgcvvDd~~g~L 194 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ----TEGMAADDEYGRL 194 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC----EEEEEEETTTTEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC----cceEEEcCCCCeE
Confidence 112 55666777 774 43 68888899999999983 3456777765443 3334445777789
Q ss_pred EEEeCCCcEEEEeCC-----CCcceEEee-CC-CCCeeEEEE--cCCCC-cEEEEEeCCCcEEEECCC
Q psy10566 533 ASGSEDGKVYIWHVK-----RELPIATLS-GH-TRTVSCVAW--NPVYH-QMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~-----~~~~~~~l~-~h-~~~V~~v~~--sp~~~-~~l~s~s~Dg~I~iW~~~ 590 (604)
+.+-++.-|..++.+ +++.+..+. ++ ...+..|++ .+++. .+|+|+-.+.+..+|+..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999998777777755 344555542 23 346888888 44433 466666578899999996
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0057 Score=60.85 Aligned_cols=198 Identities=14% Similarity=0.115 Sum_probs=108.1
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec---cCCCCeeEEEECCC---CCeEEEEeCCC----c
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE---GHTLGVAYLAWSPD---SSHLLVVGPED----C 370 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~spd---~~~l~s~~~d~----~ 370 (604)
-..-+.++|.|||+++++ ..+|.|.+++ + +....+..+. ........|+|+|+ +..|.++.... .
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~---g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-E---GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-T---TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-C---CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 345789999999985554 5679999998 3 2333333222 22456889999998 55555444321 0
Q ss_pred eEEEEEECCCce-----EEEE-ec--CCCCCCeEEEEEecCCCEEEEEec-------------CCeEEEEEcCCCe----
Q psy10566 371 HELWVWNIETEL-----LRVK-LN--HSPEDSLTSCSWNRDGTKFVCGGI-------------RGQFYQCDIEGQV---- 425 (604)
Q Consensus 371 ~~i~vwd~~~~~-----~~~~-~~--~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~---- 425 (604)
..|..|+...+. .+.. +. .........++|.|||..+++.+. .|.|.-++.+++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 268888877531 1221 22 111123468999999977666432 2577777776622
Q ss_pred ---------eeee-ece-eEEEEEEcC-CCCEEEEEeCCCeE------EEEEcCCCc------------------ccccc
Q psy10566 426 ---------LDSW-EGV-RVNCLWCRS-DGKSVLAADTHHRI------RTYNFEHLT------------------DSNLL 469 (604)
Q Consensus 426 ---------~~~~-~~~-~v~~l~~s~-~g~~l~~~~~dg~I------~i~d~~~~~------------------~~~~~ 469 (604)
...+ .++ ....++|+| ++..+++-.....+ .+.-+..+. .....
T Consensus 185 pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 1111 122 477889999 56644443333321 122222211 00011
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
........++| .++..+++....+.|...++...
T Consensus 265 ~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEE
T ss_pred CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCC
Confidence 11223456666 45666665556667777776543
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=0.0081 Score=59.74 Aligned_cols=199 Identities=11% Similarity=0.063 Sum_probs=111.6
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec---cCCCCeeEEEECCC---CCeEEEEeCC--Cc--
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE---GHTLGVAYLAWSPD---SSHLLVVGPE--DC-- 370 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~spd---~~~l~s~~~d--~~-- 370 (604)
-...+.++|.|||+++++ ..+|.|++++.+ +. ..+..+. ........|+|+|+ +..|.++... ..
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~---G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPS---GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSS---CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC---Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 456789999999985554 567999988732 23 3333322 22356889999998 4455444331 11
Q ss_pred --eEEEEEECCCc-------eEEE-EecCCCCCCeEEEEEecCCCEEEEEec-------------CCeEEEEEcCCCe--
Q psy10566 371 --HELWVWNIETE-------LLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGI-------------RGQFYQCDIEGQV-- 425 (604)
Q Consensus 371 --~~i~vwd~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~-- 425 (604)
..|..|+...+ +.+. .+..........++|.|||..+++.+. .|.|.-++.+++.
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~ 182 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA 182 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence 26888887654 1111 122111123467999999987776442 2567777776651
Q ss_pred --------eeeeeceeEEEEEEcC-CCCEEEEEeCCC---eEEEEEcCC--------C--------cccccc-cCCCCee
Q psy10566 426 --------LDSWEGVRVNCLWCRS-DGKSVLAADTHH---RIRTYNFEH--------L--------TDSNLL-QEDHPVM 476 (604)
Q Consensus 426 --------~~~~~~~~v~~l~~s~-~g~~l~~~~~dg---~I~i~d~~~--------~--------~~~~~~-~~~~~i~ 476 (604)
+...-......++|+| +|..+++-.... .|.+..... . ...... .......
T Consensus 183 ~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 183 DNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp TSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 2221112467899999 565444432222 243332111 0 000111 1233566
Q ss_pred EEEEC-------CCCCEEEEEecCCeEEEEecCCC
Q psy10566 477 SFTID-------ATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 477 ~~~~s-------~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.+++. .++.++++....+.|...++...
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 77773 46666666666778888888753
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.97 E-value=0.015 Score=66.94 Aligned_cols=284 Identities=15% Similarity=0.123 Sum_probs=156.5
Q ss_pred CCcEEEEEEcCC------CCeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC--CCCCeEEEEeCCCce
Q psy10566 301 CDEVWFCKFSPD------GLKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS--PDSSHLLVVGPEDCH 371 (604)
Q Consensus 301 ~~~V~~v~fspd------g~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s--pd~~~l~s~~~d~~~ 371 (604)
.+.|.|+++.|. ++++|.|.. |++|+|++++ .........+.. .....++.+. ....+|..+-.||..
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~--~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l 629 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP--SFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGAL 629 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT--TCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC--CCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeE
Confidence 458999999864 368999997 9999999998 222222333432 1233333332 234577887788832
Q ss_pred EEEEEECCCceEEEE--ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee-eeceeEEEE-EEcCC--CCE
Q psy10566 372 ELWVWNIETELLRVK--LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS-WEGVRVNCL-WCRSD--GKS 445 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~v~~l-~~s~~--g~~ 445 (604)
.-..+|..+|..... ...+ ..++.-..+...+..-+.+..+....++.-+++.... .....+..+ .|+.. .+-
T Consensus 630 ~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 630 FYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTE
T ss_pred EEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceEeccCcccCCCc
Confidence 223455555544321 1112 3455555555444444444445544445444442221 111122222 23332 234
Q ss_pred EEEEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECCCCCEEEEEecC------------------------------
Q psy10566 446 VLAADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATDRLALLNVST------------------------------ 493 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~d------------------------------ 493 (604)
++..+ ++.++|..+..... ...+.-...+..++++|..+.+++++.+
T Consensus 709 ~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 709 LALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK 787 (1158)
T ss_dssp EEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCC
T ss_pred EEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccc
Confidence 55444 45588888755322 2223345677888888877765554321
Q ss_pred -------------------CeEEEEecCCCceeeEeeccc-cceEEEEeeeCCC-CCcEEEEEe----------CCCcEE
Q psy10566 494 -------------------QGVHLWDLRDRILLRKFQGVT-QGQFTIHSCFGGA-NQDFVASGS----------EDGKVY 542 (604)
Q Consensus 494 -------------------g~I~lwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~l~sgs----------~dg~I~ 542 (604)
+.|+++|..+.+.+..+.-.. ....++..+.+.. ...+++.|. ..|.|+
T Consensus 788 ~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~ 867 (1158)
T 3ei3_A 788 LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIV 867 (1158)
T ss_dssp CC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEE
T ss_pred cccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEE
Confidence 236777877777666655332 2234444444432 357888886 348899
Q ss_pred EEeCCCCcceEEee-CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 543 IWHVKRELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 543 iwd~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|++..++.....+ ...++|++++--. +.++++. ..+|++|++...+
T Consensus 868 vf~v~~~kL~lv~~~~v~g~v~al~~~~--g~Lla~i--g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 868 VFQYSDGKLQTVAEKEVKGAVYSMVEFN--GKLLASI--NSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEEETTEEEEEEEEEESSCEEEEEEET--TEEEEEE--TTEEEEEEECTTS
T ss_pred EEEEECCEEEEEEEEEcCCcCEEEeeeC--CEEEEEc--CCEEEEEECCCCc
Confidence 99997544322211 2368899887542 5555544 4789999987653
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=0.0019 Score=63.79 Aligned_cols=197 Identities=17% Similarity=0.154 Sum_probs=115.8
Q ss_pred cEEEEEEcCCCCeEEEEE------------CCCeEEEEEeCCCCceeEeeEEecc-----CCCCeeEEEECC--CCC-eE
Q psy10566 303 EVWFCKFSPDGLKLATGS------------KDTTVIIWDVDPVTFTCQHRKTLEG-----HTLGVAYLAWSP--DSS-HL 362 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs------------~dg~i~iwd~~~~~~~~~~~~~l~~-----h~~~V~~l~~sp--d~~-~l 362 (604)
..-.++..|+|..+++++ .+|.|.++|.+..+.+...+. +.+ .......+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 344566788886555542 689999999874333333332 222 234566777755 354 45
Q ss_pred EEEeCC-CceEEEEEECCC--ce--EEEEecCCCCCCeEEEEEecCCCEEEEEe-----------------cCCeEEEEE
Q psy10566 363 LVVGPE-DCHELWVWNIET--EL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGG-----------------IRGQFYQCD 420 (604)
Q Consensus 363 ~s~~~d-~~~~i~vwd~~~--~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-----------------~dg~i~iwd 420 (604)
+++... +..+|.+|++.. +. .+..+....-...+.+.+.++|.+.++.. ..|.|+.+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 555433 223677776654 32 23344433345688999999998777654 124566665
Q ss_pred cCCCeeeeeec-eeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCC-c--ccccccCCCCeeEEEECC-CCCEEEEEecC-
Q psy10566 421 IEGQVLDSWEG-VRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHL-T--DSNLLQEDHPVMSFTIDA-TDRLALLNVST- 493 (604)
Q Consensus 421 ~~~~~~~~~~~-~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~-~--~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d- 493 (604)
.. +......+ ...+.++++||++.++.+. ..+.|..|++... . ....+........+++++ +|++.+++..+
T Consensus 210 ~~-~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g 288 (355)
T 3sre_A 210 PN-DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNG 288 (355)
T ss_dssp TT-CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCH
T ss_pred CC-eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCc
Confidence 53 22222233 2578999999998877765 4678999998632 1 112223345667888888 58876655433
Q ss_pred CeEEEEec
Q psy10566 494 QGVHLWDL 501 (604)
Q Consensus 494 g~I~lwd~ 501 (604)
+.|..||.
T Consensus 289 ~~v~~~~P 296 (355)
T 3sre_A 289 MRIFFYDA 296 (355)
T ss_dssp HHHHSCCT
T ss_pred eEEEEECC
Confidence 23444443
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.0066 Score=66.94 Aligned_cols=209 Identities=7% Similarity=-0.063 Sum_probs=131.2
Q ss_pred CCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
....+..++|++.+. ++++-...+.|+.++++...........+.........|++.+.+..|+.+.... ..|.+.++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~-~~I~v~~l 500 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-GTVSVADT 500 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT-TEEEEEET
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCC-CeEEEEeC
Confidence 345677899998544 4445555678888887621111122233333445677899998887776665544 38999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H 452 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d 452 (604)
........+. ........|++.|.+..|+.+.. .+.|...+++|.....+.. .....|++.+.+..|+.+.. .
T Consensus 501 dG~~~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 501 KGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp TSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCeEEEEEe-CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCC
Confidence 8665443333 23345889999997666665543 3689999998876655533 36889999987777776654 5
Q ss_pred CeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 453 HRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
+.|..+++.......+... -.....+++.. +.++++-...+.|...|..+++.+..+.
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 6899999876554444332 12344566632 2344444456788888877776555553
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.0014 Score=67.36 Aligned_cols=201 Identities=9% Similarity=0.060 Sum_probs=116.9
Q ss_pred CcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--CceEEEEEE
Q psy10566 302 DEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--DCHELWVWN 377 (604)
Q Consensus 302 ~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--~~~~i~vwd 377 (604)
.....++|+|+ +..|..+...+.|+.++.. ++. +..+.........++|+++|+.+++.... ....+...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~--~g~---v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFV--NQY---VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETT--TTE---EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEEC
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECC--CCE---EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEE
Confidence 34678999995 3334444333789999875 222 22333344568999999999944443321 011244444
Q ss_pred CCCceE-EEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeeeec----eeEEEEEEcCCCCEEEEEe
Q psy10566 378 IETELL-RVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSWEG----VRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 378 ~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~----~~v~~l~~s~~g~~l~~~~ 450 (604)
...+.. ...+. .......++++| ++..+++-..++.|+.+|.+ +.....+.. .....++++|+++.++.+.
T Consensus 214 ~~~~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 214 RASGFTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGGTTCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCeecccccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 332211 01111 123456788999 66666666677899999996 554222211 1234699999999655554
Q ss_pred -CCCeEEEEEcCC--Cccc---cccc---------------CCCCeeEEEE---------CCCCCEEEEEecCCeEEEEe
Q psy10566 451 -THHRIRTYNFEH--LTDS---NLLQ---------------EDHPVMSFTI---------DATDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 451 -~dg~I~i~d~~~--~~~~---~~~~---------------~~~~i~~~~~---------s~~~~~l~~~~~dg~I~lwd 500 (604)
..+.|+.++... .... .+.. .-.....+++ .+++.+.++-...+.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 568899988653 2110 1111 0123567888 77777777777788899998
Q ss_pred cCCCceeeEee
Q psy10566 501 LRDRILLRKFQ 511 (604)
Q Consensus 501 ~~~~~~~~~~~ 511 (604)
. ++ .+.++.
T Consensus 372 ~-~G-~v~t~~ 380 (433)
T 4hw6_A 372 P-EG-RVTTYA 380 (433)
T ss_dssp T-TS-EEEEEE
T ss_pred C-CC-CEEEEE
Confidence 5 45 333443
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.90 E-value=0.0047 Score=60.74 Aligned_cols=231 Identities=6% Similarity=-0.046 Sum_probs=125.1
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
...+.++.|++ +..++. +.++.| |...+...+.+.......+...+..+.+.+++..++++ .++ .|+. ..+.
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i--~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g--~v~~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIM--LHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVG--AIYR-TKDS 150 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEE--EEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTC--CEEE-ESST
T ss_pred CccEEEEEecC-CeEEEE-ECCCeE--EEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCc--cEEE-EcCC
Confidence 44688899986 454554 456644 33443333444433222234557788887777655554 444 3322 2223
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCCCeEEE
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTHHRIRT 457 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~dg~I~i 457 (604)
|+.-..........+..+++.+++..++++...+..+..|-.+....... ...+..+++.+++..+ +++.+|.+++
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 43223333344557899999998887766654443444443344333322 2357788888888755 5556788777
Q ss_pred EEcCCCcc---ccc--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc---ccceEEEEeeeCCCCC
Q psy10566 458 YNFEHLTD---SNL--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV---TQGQFTIHSCFGGANQ 529 (604)
Q Consensus 458 ~d~~~~~~---~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~ 529 (604)
.+...+.. ... +.....+..+.+.+++..++++. ++.| .+....++.-..+... ....+.+.. .+++
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~---~~~~ 304 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILF---FSPD 304 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEE---EETT
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEE---ECCC
Confidence 64221211 111 11224578899998777666654 6656 3444445444433321 222333322 2334
Q ss_pred cEEEEEeCCCcEEEEeC
Q psy10566 530 DFVASGSEDGKVYIWHV 546 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~ 546 (604)
.+++++.+|.|.-++-
T Consensus 305 -~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 -QGFILGQKGILLRYVT 320 (327)
T ss_dssp -EEEEECSTTEEEEECC
T ss_pred -ceEEEcCCceEEEEcC
Confidence 4666678898877664
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.034 Score=59.66 Aligned_cols=282 Identities=9% Similarity=-0.058 Sum_probs=154.7
Q ss_pred CcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
.....+++.+.+. ++++-...+.|.+.+.+ ..... ..+...-.....|++.|.+.+|+.+.......|...++..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d--G~~~~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLD--GSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCE--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECC--CCCEE--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC
Confidence 5688999999655 44555567889999987 21111 1122334557889999976666665543223788888765
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEe-CCCeE
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAAD-THHRI 455 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~-~dg~I 455 (604)
........ ..-.....+++++++..|..+. ..+.|..+|++|.....+.. .....+++..+ .++.+. ..+.|
T Consensus 160 ~~~~~l~~-~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V 236 (619)
T 3s94_A 160 SSRFIIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSI 236 (619)
T ss_dssp CSCEEEEC-SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSE
T ss_pred CceEEEEe-CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEE
Confidence 43333332 2234578999999766666554 45789999998765544322 12345666544 444443 45678
Q ss_pred EEEEcCCCcccccccC-CCC-------------------------eeEEEE-----------CCCC--------------
Q psy10566 456 RTYNFEHLTDSNLLQE-DHP-------------------------VMSFTI-----------DATD-------------- 484 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~~-~~~-------------------------i~~~~~-----------s~~~-------------- 484 (604)
...|..+++....+.. ... ...+++ .|.|
T Consensus 237 ~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~ 316 (619)
T 3s94_A 237 LACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGA 316 (619)
T ss_dssp EEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSC
T ss_pred EEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCC
Confidence 8888765432211110 000 000111 1111
Q ss_pred -CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe
Q psy10566 485 -RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV 562 (604)
Q Consensus 485 -~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V 562 (604)
.+|+.+ ..+.|+..++..............-...+ .+.+.+ ++.++++-...+.|+.++.........+...-..+
T Consensus 317 ~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~-~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p 394 (619)
T 3s94_A 317 TELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAI-AIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHP 394 (619)
T ss_dssp SEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred ceEEEEE-cccceEEEecCCCccceeEEeccccCccE-EEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCc
Confidence 122322 33456666665443211111111101122 233334 45555555567889999887544433343334567
Q ss_pred eEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 563 SCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 563 ~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
..+++.+.+++++++-+..+.|.+.+++..
T Consensus 395 ~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 395 DGIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 889998764677777777888998888754
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0062 Score=65.44 Aligned_cols=225 Identities=8% Similarity=-0.034 Sum_probs=132.9
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE-EEEecCCCCCCeEEEEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL-RVKLNHSPEDSLTSCSW 400 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~ 400 (604)
...|+..+++. ..... ..+...-..+..++|++.+..|+.+.... ..|..+++..... ...+. ..-.....+++
T Consensus 17 ~~~I~~i~~~~--~~~~~-~~~~~~~~~~~~ld~~~~~~~ly~sD~~~-~~I~r~~~~g~~~~~~v~~-~~~~~P~GlAv 91 (619)
T 3s94_A 17 RRDLRLVDATN--GKENA-TIVVGGLEDAAAVDFVFSHGLIYWSDVSE-EAIKRTEFNKTESVQNVVV-SGLLSPDGLAC 91 (619)
T ss_dssp SSBEEEECCC------------CBCCSCEEEEEEETTTTEEEEEETTT-TEEEEEEC-----CEEEEC-SSCSCEEEEEE
T ss_pred cccEEEEeCCC--CcceE-EEEEcCCCceEEEEEEeCCCEEEEEECCC-CeEEEEEccCCCceEEEEe-CCCCCcCeEEE
Confidence 56688888761 11111 11222344578999999877777766544 3899999876532 22222 22246889999
Q ss_pred ecCCCEEE-EEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccccc-CCC
Q psy10566 401 NRDGTKFV-CGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNLLQ-EDH 473 (604)
Q Consensus 401 ~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~~~-~~~ 473 (604)
.+.+..++ +-...+.|.+.+++|.....+.. .....+++.|.+..++.+.. .+.|...++.......+.. .-.
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~ 171 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 171 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCC
Confidence 99655554 44567899999998876544432 25778999998776666664 4678877876654433332 345
Q ss_pred CeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 474 PVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
....+++++++..|+.+. ..+.|..+|+..........+.......+. . ..+ .++++-..++.|...|..+++..
T Consensus 172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~--~-~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT--L-FED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEE--E-SSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred CCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEE--E-eCC-EEEEecCCCCEEEEEECCCCccc
Confidence 678999999776666654 456799999875433322221112222222 2 233 45555556788999998877655
Q ss_pred EEe
Q psy10566 553 ATL 555 (604)
Q Consensus 553 ~~l 555 (604)
..+
T Consensus 248 ~~i 250 (619)
T 3s94_A 248 REI 250 (619)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0039 Score=60.25 Aligned_cols=196 Identities=7% Similarity=0.092 Sum_probs=125.1
Q ss_pred EEEEEEcCCCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEecc----C--CCCeeEEEE---CCCCCeEEEEeC------
Q psy10566 304 VWFCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEG----H--TLGVAYLAW---SPDSSHLLVVGP------ 367 (604)
Q Consensus 304 V~~v~fspdg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~----h--~~~V~~l~~---spd~~~l~s~~~------ 367 (604)
--+++|.+....|..++ ..++|..|+.. .+....+ .+.+ . ...+..|.| .|+++.+++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~--~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPK--TQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTT--TCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCC--CCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34678988655555555 78999999986 2222223 3332 1 113579999 688777665431
Q ss_pred -----CCceEEEEEECC---CceEEEEecCC------------CCCCeEEEEEecCCCEEEEEecC-CeEEEEEcCCCee
Q psy10566 368 -----EDCHELWVWNIE---TELLRVKLNHS------------PEDSLTSCSWNRDGTKFVCGGIR-GQFYQCDIEGQVL 426 (604)
Q Consensus 368 -----d~~~~i~vwd~~---~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~ 426 (604)
.+...|..+|+. +++........ .......++..++|+..++++.. +.|...+.+|+.+
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 112379999999 77655444311 11347899999999999999999 9999999888755
Q ss_pred eeeece--------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--cccc--c---CCCCeeE-EEECCCCCEEEEE
Q psy10566 427 DSWEGV--------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLL--Q---EDHPVMS-FTIDATDRLALLN 490 (604)
Q Consensus 427 ~~~~~~--------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~--~---~~~~i~~-~~~s~~~~~l~~~ 490 (604)
..|... ..+.+++.|+|+.|++....|.+..+|+..... .... . ....... +..-.+|+.++++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~ 251 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG 251 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEE
Confidence 544211 256899999999999998899999999885322 1111 1 1112233 2334467775554
Q ss_pred e-cCCeEEEEecC
Q psy10566 491 V-STQGVHLWDLR 502 (604)
Q Consensus 491 ~-~dg~I~lwd~~ 502 (604)
. ..+.+.+.+..
T Consensus 252 ~~~~~~~~l~S~D 264 (334)
T 2p9w_A 252 ARAPYAISFRSWD 264 (334)
T ss_dssp EETTEEEEEECSS
T ss_pred cCCCCEEEEECCC
Confidence 4 34545555443
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.012 Score=58.34 Aligned_cols=221 Identities=14% Similarity=0.060 Sum_probs=118.4
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE--EEEec--CCCCCCeEEEEEecC---CCEEEEEec-C-----C
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL--RVKLN--HSPEDSLTSCSWNRD---GTKFVCGGI-R-----G 414 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~--~~~~~~v~~~~~~~~---~~~l~s~~~-d-----g 414 (604)
.....++|.|+|+.+++ ...+ .|++++ ++.. +..+. .........++|+|+ +..|.++.. . +
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g--~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPG--RIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTT--EEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCeEEEE-eCCC--eEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 35679999999985555 5555 899998 4432 22211 112346889999998 555554443 2 6
Q ss_pred eEEEEEcCCC-------eeeeee-----ceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCCc-----
Q psy10566 415 QFYQCDIEGQ-------VLDSWE-----GVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHLT----- 464 (604)
Q Consensus 415 ~i~iwd~~~~-------~~~~~~-----~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~~----- 464 (604)
.|..++.++. .+..+. .|....++|.|+|...++.+. .+.|..++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 7888887542 111122 134568999999976665432 2567767665310
Q ss_pred -------cccccc-CCCCeeEEEECC-CCCEEEEEecCCeE------EEEecCCCc------------------eeeEee
Q psy10566 465 -------DSNLLQ-EDHPVMSFTIDA-TDRLALLNVSTQGV------HLWDLRDRI------------------LLRKFQ 511 (604)
Q Consensus 465 -------~~~~~~-~~~~i~~~~~s~-~~~~l~~~~~dg~I------~lwd~~~~~------------------~~~~~~ 511 (604)
...+.. .......++|+| ++.+.++-...+.+ .+.-+..+. ++..+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 111111 112356789999 55655544333321 122222221 112221
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc------eEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP------IATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~------~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
.+. ....+ .+ .+|.++++.-..+.|...++..... ...+-.-...+..+++.|+ +.++++..
T Consensus 266 ~~~-ap~G~--~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd-G~lyv~~~ 333 (352)
T 2ism_A 266 QGF-PPGNL--AF--FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPD-GALYVTTS 333 (352)
T ss_dssp TCC-CEEEE--EE--ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTT-SCEEEEEC
T ss_pred CCC-CCcce--EE--ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCC-CcEEEEEe
Confidence 111 11122 22 3566666666677788777764331 1222222367899999999 55555543
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0055 Score=59.75 Aligned_cols=191 Identities=12% Similarity=0.179 Sum_probs=122.6
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC----CCE--EEEEe--c--CCeEEEEEcC--CCee
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD----GTK--FVCGG--I--RGQFYQCDIE--GQVL 426 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~s~~--~--dg~i~iwd~~--~~~~ 426 (604)
...++.....+ -+.+||+ +|+.+..+.. +.+..+..-|+ |+. ++.++ . +++|.+|+++ ...+
T Consensus 40 ~s~ii~t~k~~--gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 40 NSKLITTNKKS--GLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GCEEEEEETTT--EEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred ccEEEEEcCCC--CEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 34455444444 6999999 7887777752 56777777663 222 33333 3 5789999773 3345
Q ss_pred eeeec---------eeEEEEEE--cCC-CC-EEEEEeCCCeEEEEEcCC-------CcccccccCCCCeeEEEECCCCCE
Q psy10566 427 DSWEG---------VRVNCLWC--RSD-GK-SVLAADTHHRIRTYNFEH-------LTDSNLLQEDHPVMSFTIDATDRL 486 (604)
Q Consensus 427 ~~~~~---------~~v~~l~~--s~~-g~-~l~~~~~dg~I~i~d~~~-------~~~~~~~~~~~~i~~~~~s~~~~~ 486 (604)
..+.. ..+..+++ ++. ++ ++++...+|.+..|++.. .+....+.....+..+.+++....
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 44421 23445666 674 43 688888899999999843 233444555778899999999999
Q ss_pred EEEEecCCeEEEEecC-----CCceeeEee-cc-ccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCC-CCcceEEee
Q psy10566 487 ALLNVSTQGVHLWDLR-----DRILLRKFQ-GV-TQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVK-RELPIATLS 556 (604)
Q Consensus 487 l~~~~~dg~I~lwd~~-----~~~~~~~~~-~~-~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~-~~~~~~~l~ 556 (604)
|+++-.+..|..|+.+ +++.+..+. ++ ......+.. ...++++ +|++.+ .+++..+||.. +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai-~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTI-YYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEE-EECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEE-EecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999999888888855 244554442 21 123344432 2234444 666665 57899999997 677777774
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.028 Score=60.37 Aligned_cols=224 Identities=7% Similarity=-0.033 Sum_probs=141.7
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCeeeeeec---eeEEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEGQVLDSWEG---VRVNC 436 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~---~~v~~ 436 (604)
+|+.+... .|+..++.+......+....-..+..++|++.+..++.+ ..++.|..+++++.....+.. .....
T Consensus 8 ~Ll~s~~~---~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 8 FLLFSRRA---DIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp EEEEEETT---EEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred EEEEEeCC---cEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 45554433 599999987654443332333468899999966665544 557899999998754433322 25778
Q ss_pred EEEcCCCCEEEEE-eCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeEeec
Q psy10566 437 LWCRSDGKSVLAA-DTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 437 l~~s~~g~~l~~~-~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~~~~ 512 (604)
+++.+.+..|+.+ ...+.|.+.++.......+. ..-.....++++|....|+.+.. .+.|...++...........
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~ 164 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN 164 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC
Confidence 9998776655555 45678999998765443333 33456789999997666666653 56788888765443322222
Q ss_pred cccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 513 VTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
-..... +..+++ +++.++-...+.|..+|+..... ..+...-....++++.. +.++++-...+.|...|..+
T Consensus 165 -~~~P~G---lalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 165 -VGRANG---LTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp -CSSEEE---EEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTT
T ss_pred -CCCcce---EEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCC
Confidence 222222 233454 44445555678899999875444 34444444567888874 46777766788888888766
Q ss_pred CCC
Q psy10566 592 NTN 594 (604)
Q Consensus 592 ~~~ 594 (604)
+..
T Consensus 238 g~~ 240 (628)
T 4a0p_A 238 GQN 240 (628)
T ss_dssp CCS
T ss_pred CCc
Confidence 653
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0049 Score=63.60 Aligned_cols=204 Identities=8% Similarity=0.088 Sum_probs=115.9
Q ss_pred cEEEEEEcCC-CC-eEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEE-------CCCCCeEEEEeCCC---
Q psy10566 303 EVWFCKFSPD-GL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAW-------SPDSSHLLVVGPED--- 369 (604)
Q Consensus 303 ~V~~v~fspd-g~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~-------spd~~~l~s~~~d~--- 369 (604)
....|+|+|. +. ++++....+.|++.|.+ ......+..... .......++| ++++..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~--~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLK--NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETT--TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECC--CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 4678999983 44 44444434567777776 323222222111 2235889999 99999777766543
Q ss_pred --ceEEEEEECCC-ceEE-----EEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcC-------CCee-------
Q psy10566 370 --CHELWVWNIET-ELLR-----VKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIE-------GQVL------- 426 (604)
Q Consensus 370 --~~~i~vwd~~~-~~~~-----~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~-------~~~~------- 426 (604)
...|.+++... +... ..+. . ......++++|+ +..+++-..++.|..+|++ ...+
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~-~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIA-A-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEE-E-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred ccCceEEEEecCCCCceeecccceeec-c-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 12466775443 1211 1111 0 123457788995 5555566677889999986 2222
Q ss_pred -----ee-e--e-ceeEEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCc--c---cccccC---------------CCCee
Q psy10566 427 -----DS-W--E-GVRVNCLWCRSDGKSVLAA-DTHHRIRTYNFEHLT--D---SNLLQE---------------DHPVM 476 (604)
Q Consensus 427 -----~~-~--~-~~~v~~l~~s~~g~~l~~~-~~dg~I~i~d~~~~~--~---~~~~~~---------------~~~i~ 476 (604)
.. + . ......++++|+|+.++.+ +..+.|+.++..... . ..+... -....
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 11 1 1 1245789999999965554 566789997654321 1 011110 01233
Q ss_pred -EEEEC-------CCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 477 -SFTID-------ATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 477 -~~~~s-------~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
.++.. +++.+.++-..++.|+.++ .++ .+.++.+
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG 417 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAG 417 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEE
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEec
Confidence 45554 4566666667788899998 455 4445543
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.016 Score=55.98 Aligned_cols=202 Identities=11% Similarity=0.036 Sum_probs=127.1
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEEEEecCC----C--CCCeEEEEE---ecCCCEEEEEec
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKLNHS----P--EDSLTSCSW---NRDGTKFVCGGI 412 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~l~s~~~ 412 (604)
+.....-..+++|.+....+..++. .+ +|..||...+......... . ...+..+.| .|+++.+++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g--~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKG--RIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTT--EEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCC--EEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 3334444567899887667777664 55 8999999866433332211 1 113679999 688777775442
Q ss_pred -------------CCeEEEEEcC----CCeeeeee------c---------eeEEEEEEcCCCCEEEEEeCC-CeEEEEE
Q psy10566 413 -------------RGQFYQCDIE----GQVLDSWE------G---------VRVNCLWCRSDGKSVLAADTH-HRIRTYN 459 (604)
Q Consensus 413 -------------dg~i~iwd~~----~~~~~~~~------~---------~~v~~l~~s~~g~~l~~~~~d-g~I~i~d 459 (604)
+..+..||+. ++.+.... + .....++..++|+..++++.. +.|..++
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 6789999988 66554332 1 248899999999999999888 8888877
Q ss_pred cCCCccccccc------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee-eEee--cc---ccceEEEEeeeCCC
Q psy10566 460 FEHLTDSNLLQ------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL-RKFQ--GV---TQGQFTIHSCFGGA 527 (604)
Q Consensus 460 ~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~-~~~~--~~---~~~~~~i~~~~~~~ 527 (604)
........... .....+.++++|+++.|++....+.+..+|+.+.... .... +. -.....+ +....
T Consensus 166 pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgi--lp~~~ 243 (334)
T 2p9w_A 166 ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKI--VTVPV 243 (334)
T ss_dssp TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEE--EEEEE
T ss_pred CCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccc--ccccc
Confidence 76543221111 1223679999999999999988999999998853220 1111 21 1111222 11124
Q ss_pred CCcE-EEEEeCCCcEEEEeCCC
Q psy10566 528 NQDF-VASGSEDGKVYIWHVKR 548 (604)
Q Consensus 528 ~~~~-l~sgs~dg~I~iwd~~~ 548 (604)
+|+. +++.+..+.+.+.+...
T Consensus 244 ~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp TTEEEEEEEETTEEEEEECSST
T ss_pred CCEEEEEEcCCCCEEEEECCCC
Confidence 6666 55555566666666554
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.018 Score=57.23 Aligned_cols=149 Identities=12% Similarity=0.193 Sum_probs=83.3
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe----ccCCCCeeEEEECCC---CCeEEEEeCC----C
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL----EGHTLGVAYLAWSPD---SSHLLVVGPE----D 369 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l----~~h~~~V~~l~~spd---~~~l~s~~~d----~ 369 (604)
-...+.|+|.|+|++|..+...|.|++++.+ ......+..+ .........|+|+|+ +..|..+... +
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3467899999999934445578999998743 1111111111 122356789999996 4455444321 1
Q ss_pred --ceEEEEEECCCc-----e--EEEE-ecC--CCCCCeEEEEEecCCCEEEEEec-------------CCeEEEEEcCCC
Q psy10566 370 --CHELWVWNIETE-----L--LRVK-LNH--SPEDSLTSCSWNRDGTKFVCGGI-------------RGQFYQCDIEGQ 424 (604)
Q Consensus 370 --~~~i~vwd~~~~-----~--~~~~-~~~--~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~ 424 (604)
...|..|+...+ . .+.. +.. ........++|.|||.++++.+. .|.|.-++.+++
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 125777776533 1 1111 110 01112457999999976666543 257878887765
Q ss_pred e-------------eeee-ece-eEEEEEEcCCCCEEEEEeC
Q psy10566 425 V-------------LDSW-EGV-RVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 425 ~-------------~~~~-~~~-~v~~l~~s~~g~~l~~~~~ 451 (604)
. ...+ .++ ....++|.+....|.++..
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEec
Confidence 2 1222 233 5888999994444555443
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00012 Score=80.28 Aligned_cols=235 Identities=7% Similarity=-0.015 Sum_probs=136.4
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC----ceEEEEecCCCCCCeEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSPEDSLTS 397 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~----~~~~~~~~~~~~~~v~~ 397 (604)
.+.|++.++. .......+. ....+..++|.+.+..|+.+.... ..|+.+++.+ ......+. ........
T Consensus 385 ~~~I~~id~~----~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~-~~I~~~~~~g~~~~~~~~~~i~-~~~~~P~g 457 (699)
T 1n7d_A 385 RHEVRKMTLD----RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-RDIQAPDG 457 (699)
T ss_dssp TTC-CEECTT----SCCEECCSC-CCTTCCCCEEETTTTEEEECCTTT-TSBEEEESCCCCC-CCCCCBCC-SCC--CCC
T ss_pred ccceEEEeCC----CCcceeeec-cCcceEEEccccccCeEEEEecCC-CeEEEEecCCCCCCcceEEEEe-CCCCCcce
Confidence 4567777766 111112222 234567899999877777765543 3799999875 22111111 11123567
Q ss_pred EEEecCC-CEEEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccccc-
Q psy10566 398 CSWNRDG-TKFVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNLLQ- 470 (604)
Q Consensus 398 ~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~~~- 470 (604)
+++.+.+ +.+++-...+.|.++++++.....+.. .....+++.|.+..|+.+.. .+.|..+++.......+..
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 8888644 445554567899999998776554432 35678899987666665543 2678888876543333322
Q ss_pred CCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCceeeEeecc--ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 471 EDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRILLRKFQGV--TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.-.....++++|++..|+++ ...+.|..+|+........+... ......+. .. . +.++++....+.|..+|..
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gla--vd-~-~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA--VF-E-DKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCE--EE-T-TEEEEECSTTTCEEEEETT
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeE--EE-C-CEEEEEeCCCCeEEEEEcc
Confidence 23456789999886655555 45678999998653222222111 11111221 11 2 3455666667899999988
Q ss_pred CCcceEEeeCCCCCeeEEEE
Q psy10566 548 RELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V~~v~~ 567 (604)
+|+.+..+......+..|++
T Consensus 614 ~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 614 TGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp TEEEEECCCTTCSSCCCCCB
T ss_pred CCCceEEeecCCCCCcEEEE
Confidence 88877776543333445544
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.06 Score=53.66 Aligned_cols=254 Identities=15% Similarity=0.156 Sum_probs=159.6
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 401 (604)
+..|.|-|+...... ..+.+. --+.-.+|..+.++.=. .. ++.++|+++...+..+.. ...|..-.|-
T Consensus 47 ~~~vvIiDl~~~~~~--~rrpi~-----AdsAIMnP~~~iiALra-g~--~lQiFnle~K~klks~~~--~e~VvfWkWi 114 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNP--IRRPIS-----ADSAIMNPASKVIALKA-GK--TLQIFNIEMKSKMKAHTM--TDDVTFWKWI 114 (494)
T ss_dssp CCEEEEEETTSTTSC--EEEECC-----CSEEEECSSSSCEEEEE-TT--EEEEEETTTTEEEEEEEC--SSCCCEEEEE
T ss_pred CCeEEEEECCCCCcc--eecccc-----cceeeeCCCCcEEEEec-CC--eEEEEchHHhhhhcceec--CCCceEEEec
Confidence 346788887732221 111221 22445788888777765 33 799999999988877763 3457777777
Q ss_pred cCCCEEEEEecCCeEEEEEcCC--Ceeeeeece------eEEEEEEcCCCCEEEEEeC-------CCeEEEEEcCCCccc
Q psy10566 402 RDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV------RVNCLWCRSDGKSVLAADT-------HHRIRTYNFEHLTDS 466 (604)
Q Consensus 402 ~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~------~v~~l~~s~~g~~l~~~~~-------dg~I~i~d~~~~~~~ 466 (604)
.+... +.. .+..|+.|++++ ...+.+..+ .|.....+++.++++..+- .|.+.+|..+.....
T Consensus 115 s~~~l-~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ 192 (494)
T 1bpo_A 115 SLNTV-ALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ 192 (494)
T ss_dssp ETTEE-EEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE
T ss_pred CCCeE-EEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc
Confidence 55433 332 356899999954 556666543 7889999999999775543 377899998877665
Q ss_pred ccccCCCCeeEEEECCCC---CEEEEEec---CCeEEEEecCCC---ce-e----eE--eeccccceEEEEeeeCCCCCc
Q psy10566 467 NLLQEDHPVMSFTIDATD---RLALLNVS---TQGVHLWDLRDR---IL-L----RK--FQGVTQGQFTIHSCFGGANQD 530 (604)
Q Consensus 467 ~~~~~~~~i~~~~~s~~~---~~l~~~~~---dg~I~lwd~~~~---~~-~----~~--~~~~~~~~~~i~~~~~~~~~~ 530 (604)
.+-+|......+.+..+. ..+..+.. .+.+++.++... .. . .. +.......+.+..-. ++.-.
T Consensus 193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqv-s~kyg 271 (494)
T 1bpo_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-SEKHD 271 (494)
T ss_dssp EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEE-ETTTT
T ss_pred hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEe-cccCC
Confidence 555554444333333221 23333333 268999998543 11 0 00 111122334444333 45666
Q ss_pred EEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 531 ~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
.++.-+.-|.|++||+.++.++..-+-...+|..-+-+.. ..=++.....|.|.--.++.
T Consensus 272 viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~-~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT-TTEEEEEETTCEEEEEEECT
T ss_pred EEEEEecCceEEEEecccceeeeeecccCCceEEecccCC-CCcEEEEccCceEEEEEEcc
Confidence 8888899999999999999999988877777877666665 33444555777776555544
|
| >2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A | Back alignment and structure |
|---|
Probab=97.64 E-value=4.8e-05 Score=57.06 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=33.6
Q ss_pred CCCChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccC
Q psy10566 82 MTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLD 118 (604)
Q Consensus 82 ~~~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~ 118 (604)
|++++.||.+||..||+|.||..||.+|++||.+.-.
T Consensus 1 msitsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~ 37 (90)
T 2xtc_A 1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQS 37 (90)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGS
T ss_pred CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCcc
Confidence 5788999999999999999999999999999997654
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.071 Score=52.83 Aligned_cols=224 Identities=9% Similarity=-0.023 Sum_probs=122.4
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-EEEEec--CCCCCCeEEEEEecC---CCEEEEEec----C----
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-LRVKLN--HSPEDSLTSCSWNRD---GTKFVCGGI----R---- 413 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-~~~~~~--~~~~~~v~~~~~~~~---~~~l~s~~~----d---- 413 (604)
.....++|.|+|+.+++ ...+ .|++++. ++. .+..+. .........++|+|+ +..|.++.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g--~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPG--RLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTT--EEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCC--EEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 45789999999975554 5555 7998873 454 222211 112345889999997 555554433 3
Q ss_pred CeEEEEEcCCC---------eeeeee---ceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCCc----
Q psy10566 414 GQFYQCDIEGQ---------VLDSWE---GVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHLT---- 464 (604)
Q Consensus 414 g~i~iwd~~~~---------~~~~~~---~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~~---- 464 (604)
..|..|+.++. .+..+. .|....++|.|||...++.+. .|.|..++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 57777877543 111122 234567999999986666432 2466666654321
Q ss_pred ---cccccc-CCCCeeEEEECC-CCCEEEEEecCC---eEEEEecCC--------C--------ceeeEe-eccccceEE
Q psy10566 465 ---DSNLLQ-EDHPVMSFTIDA-TDRLALLNVSTQ---GVHLWDLRD--------R--------ILLRKF-QGVTQGQFT 519 (604)
Q Consensus 465 ---~~~~~~-~~~~i~~~~~s~-~~~~l~~~~~dg---~I~lwd~~~--------~--------~~~~~~-~~~~~~~~~ 519 (604)
...+.. .......++|+| ++.+.++-...+ .|.+...-. + .++..+ ..+. ....
T Consensus 185 pf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~-ap~G 263 (354)
T 3a9g_A 185 PFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETW-APSG 263 (354)
T ss_dssp SSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCC-CEEE
T ss_pred CCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCc-CCcc
Confidence 011111 123356899999 565544433322 244332110 0 112222 1111 1112
Q ss_pred EEeeeC------CCCCcEEEEEeCCCcEEEEeCCCC-cce--EEe-eCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 520 IHSCFG------GANQDFVASGSEDGKVYIWHVKRE-LPI--ATL-SGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 520 i~~~~~------~~~~~~l~sgs~dg~I~iwd~~~~-~~~--~~l-~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
+ .+. ..+|.++++.-..+.|...++... +.. ..+ .+-...+..+++.|+ +.++++..
T Consensus 264 ~--~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD-G~lyv~~~ 330 (354)
T 3a9g_A 264 A--SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD-GGILISTS 330 (354)
T ss_dssp E--EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT-SCEEEEEC
T ss_pred e--EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC-CcEEEEEe
Confidence 2 221 246777777767788988888753 322 223 222457899999999 56666654
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.094 Score=52.29 Aligned_cols=232 Identities=14% Similarity=0.165 Sum_probs=145.9
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-EE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-LR 384 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-~~ 384 (604)
+.-.+|..+.+|.=. ..++.|+|++ ....++.+.- ...|..=.|-.+. .|+..+.. .|+-|++.... +.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle----~K~klks~~~-~e~VvfWkWis~~-~l~lVT~t---aVyHWsi~~~s~P~ 139 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIE----MKSKMKAHTM-TDDVTFWKWISLN-TVALVTDN---AVYHWSMEGESQPV 139 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETT----TTEEEEEEEC-SSCCCEEEEEETT-EEEEECSS---EEEEEESSSSCCCE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchH----Hhhhhcceec-CCCceEEEecCCC-eEEEEcCC---eeEEecccCCCCch
Confidence 345678888777665 7899999998 3344455443 3467777776443 56666655 59999997543 33
Q ss_pred EEecCC---CCCCeEEEEEecCCCEEEEEec-------CCeEEEEEcCCCeeeeeeceeEEEEEEcCCCC-----EEEEE
Q psy10566 385 VKLNHS---PEDSLTSCSWNRDGTKFVCGGI-------RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGK-----SVLAA 449 (604)
Q Consensus 385 ~~~~~~---~~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~-----~l~~~ 449 (604)
..+... ....|..-..+++.++++..|- .|.+.+|..+.+.-+.+++|...-..+-.+|+ .+..+
T Consensus 140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa 219 (494)
T 1bpo_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (494)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEE
T ss_pred hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEE
Confidence 333211 1345777778889998876543 46889999998888888888655444444432 23333
Q ss_pred eC---CCeEEEEEcCCCc-cccc---------ccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc
Q psy10566 450 DT---HHRIRTYNFEHLT-DSNL---------LQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 450 ~~---dg~I~i~d~~~~~-~~~~---------~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~ 513 (604)
.. .+++++.++.... .... +.. ..-..++.+++....++.-+.-|.|++||+.++.++..-.-.
T Consensus 220 ~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp ECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc
Confidence 33 2789999986531 1100 111 233457888888899999999999999999999988665544
Q ss_pred ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
...++. . +.....+ =+++....|.|.--.++...
T Consensus 300 ~~~iF~-t-~~~~~~~-Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 300 GETIFV-T-APHEATA-GIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp SSCEEE-E-EEETTTT-EEEEEETTCEEEEEEECTTT
T ss_pred CCceEE-e-cccCCCC-cEEEEccCceEEEEEEcccc
Confidence 443332 1 2222233 34444466766655555433
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.063 Score=51.78 Aligned_cols=246 Identities=7% Similarity=-0.004 Sum_probs=138.8
Q ss_pred cCCCCeEEEEE--CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC------------ceEEEE
Q psy10566 310 SPDGLKLATGS--KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED------------CHELWV 375 (604)
Q Consensus 310 spdg~~lasgs--~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~------------~~~i~v 375 (604)
+.+|.+|.... .++.|...+.+ .... ..+... .+--++++|.+|..+.... ...|+.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d--g~~~---~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID--GSNI---HKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT--SCSC---EEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC--CCCC---EEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 35666666554 24545544443 2222 222211 1334578898888876542 246888
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe----cCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeC
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG----IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~ 451 (604)
.++..+....... . .+..|+++++.|+-.. ....|+..+++|.....+....+ ..++++++.|+..+.
T Consensus 93 i~~dg~~~~~l~~----~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 93 IKRNGHGSTVLDP----D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNP 164 (302)
T ss_dssp EETTSCCCEEEEC----S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEECT
T ss_pred EeCCCCcceEeec----C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEeC
Confidence 8888776433322 1 1337788898888776 34466777777766665655544 456788888887766
Q ss_pred -CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC--CeEEEEecCCCceeeEeeccccceEEEEeeeCCCC
Q psy10566 452 -HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST--QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 452 -dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
...|...++.......+.. .... ..+.|++.+|+-.... ..|..-++..... ..+.... + .+++|+
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~~~-----~--~~~~~~ 233 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTEAN-----I--EHYNVY 233 (302)
T ss_dssp TTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSCSC-----E--EEEEEE
T ss_pred CCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeCCC-----c--ceEEEC
Confidence 5678888887765444433 2222 3456889888876654 3577777765542 2332111 1 123467
Q ss_pred CcEEEEEeC--CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 529 QDFVASGSE--DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 529 ~~~l~sgs~--dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+++|+-++. .+.|..-++.... ...+... .+..+.. .+..+..+--..+.|..-+
T Consensus 234 g~~Iy~~~~~~~~~i~~~~~DG~~-r~~l~~~--~~~~i~i--~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVKNDGTG-FKELAKG--EFCNINV--TSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCC-CEEEEES--CEEEEEE--CSSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCCc-cEEeeCC--ccceEEE--eCCEEEEEECCCCeEEEEE
Confidence 777776533 3566666665433 3333221 2444444 4345555554556554434
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00082 Score=73.53 Aligned_cols=208 Identities=7% Similarity=-0.071 Sum_probs=122.4
Q ss_pred CcEEEEEEcCCCCeEEEE-ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLATG-SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasg-s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
..+..++|++.+..|..+ ...+.|..+++............+.........|++.+.+..|+.+.... ..|.++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~-~~I~v~d~dg 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-GTVSVADTKG 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTT-SCEEEEBSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccC-CeEEEEecCC
Confidence 346678999876655544 35578888887621000111111111123356788886555555543332 3799999876
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEe-CCCe
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAAD-THHR 454 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~-~dg~ 454 (604)
......+. ........+++.|.+.+|+.+.. .+.|..++++|.....+. ....+.+++++++..|+.+. ..+.
T Consensus 485 ~~~~~l~~-~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 485 VKRKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp CCEEEECC-CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CceEEEEe-CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 65443333 22234678899996665555443 278888888776544432 12467899998766655554 5678
Q ss_pred EEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 455 IRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
|..+++.......+... ......+++..+ .++++....+.|..+|..+++.+..+..
T Consensus 564 I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 564 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred EEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 99999876443333321 123345555543 4444555667899999888877666643
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.33 E-value=0.17 Score=58.34 Aligned_cols=211 Identities=10% Similarity=0.080 Sum_probs=119.1
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec---C-CCEEEEEe----------cCCeEEEEEcCCCeeeeeece----e
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR---D-GTKFVCGG----------IRGQFYQCDIEGQVLDSWEGV----R 433 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~----~ 433 (604)
.|++.|..+.+.+..+.......+.+++... + ..++++|+ ..|.|.+|++.+..++..... .
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 5778888888777666655556666666432 2 46888876 357899999865445444332 4
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC--CCceeeEe
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR--DRILLRKF 510 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~--~~~~~~~~ 510 (604)
+.+++-. +| +++++ ...+|++|++...+.... ...-..+..+.+...++++++|..-..|.++..+ .++ +..+
T Consensus 888 v~al~~~-~g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~-L~~~ 963 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLAS-INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN-FEEI 963 (1158)
T ss_dssp EEEEEEE-TT-EEEEE-ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-EEEE
T ss_pred CEEEeee-CC-EEEEE-cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-EEEE
Confidence 6665543 34 44444 357899999976543221 1111113333343457788888887777665443 332 2222
Q ss_pred eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC-------cce-EEeeCC-CCCeeEEE---EcCCC-------
Q psy10566 511 QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE-------LPI-ATLSGH-TRTVSCVA---WNPVY------- 571 (604)
Q Consensus 511 ~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~-------~~~-~~l~~h-~~~V~~v~---~sp~~------- 571 (604)
...........+.+. +...++.+..+|.|.+...... +.+ ..-.-| ...|+++. +.+.+
T Consensus 964 a~D~~~~~vta~~~l--d~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~ 1041 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEIL--DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTP 1041 (1158)
T ss_dssp EECCSCBCEEEEEEE--ETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------C
T ss_pred EeecccccEEEEEEE--ccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCcccccc
Confidence 222222222222222 2347788899999999876531 112 121223 34577765 33321
Q ss_pred -CcEEEEEeCCCcEEEEC
Q psy10566 572 -HQMIASVSDDCTVRIWG 588 (604)
Q Consensus 572 -~~~l~s~s~Dg~I~iW~ 588 (604)
...++-++.+|.|-+.-
T Consensus 1042 ~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 1042 TQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp EEEEEEEEETTSCEEEEE
T ss_pred ccceEEEEecCCEEEEEE
Confidence 23577788899887653
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.016 Score=56.00 Aligned_cols=230 Identities=10% Similarity=0.087 Sum_probs=116.6
Q ss_pred CCCeEEEEE-CC-----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---ceEEEEEECCCce
Q psy10566 312 DGLKLATGS-KD-----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---CHELWVWNIETEL 382 (604)
Q Consensus 312 dg~~lasgs-~d-----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~~~~~ 382 (604)
++.+++.|+ .+ ..+.+||.. +.....+..+........++. -++..++.+|.++ ...+++||..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPK--TQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETT--TTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCC--CCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 345566665 32 357788876 444444433332222222222 3566677776542 1259999998876
Q ss_pred ---EEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC
Q psy10566 383 ---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 383 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~ 451 (604)
....-.......-.+++. .+++.++.|+.++ .+.+||+........... +....+...+++.++.|+.
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred CCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCC
Confidence 333222111111112222 2677777777543 688889865544433221 1111122226677777765
Q ss_pred C-----CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEE
Q psy10566 452 H-----HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 452 d-----g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
+ ..+.+||..+.+-..... ....-.+++. .+++.++.|+.+ ..+.+||+.+.+-... .........
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV-TSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC-CCCCCcccc
Confidence 4 458899987754332211 1111112222 256777777664 4689999987643322 111111111
Q ss_pred EEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy10566 520 IHSCFGGANQDFVASGSED-----GKVYIWHVKREL 550 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~ 550 (604)
..++. .++++++.|+.+ ..|.+||..+.+
T Consensus 247 ~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 247 VGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred eeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 11122 256777777765 357888887653
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.094 Score=51.92 Aligned_cols=230 Identities=10% Similarity=0.065 Sum_probs=121.4
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec------CCCCCCeEEEEEecC---CCEEEEEe-c------
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN------HSPEDSLTSCSWNRD---GTKFVCGG-I------ 412 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~------~~~~~~v~~~~~~~~---~~~l~s~~-~------ 412 (604)
....|+|.|+|+.++++...+ .|++++.. +.....+. .........++|+|+ +..|.++. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G--~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGG--ELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTT--EEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCCCEEEEEeCCc--eEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 468999999998444555666 89999854 33211111 112345789999996 44444443 2
Q ss_pred -CCeEEEEEcCCC--ee-------eeee-----ceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCCc
Q psy10566 413 -RGQFYQCDIEGQ--VL-------DSWE-----GVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHLT 464 (604)
Q Consensus 413 -dg~i~iwd~~~~--~~-------~~~~-----~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~~ 464 (604)
...|..|+.+.. .+ ..+. .|....++|.|||...++.+. .|.|.-++.....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666321 11 1111 234567999999966555433 2567777765431
Q ss_pred ------------cccccc-CCCCeeEEEECCCCCEEEEEecCC----eEEEEecCCCc----------------------
Q psy10566 465 ------------DSNLLQ-EDHPVMSFTIDATDRLALLNVSTQ----GVHLWDLRDRI---------------------- 505 (604)
Q Consensus 465 ------------~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg----~I~lwd~~~~~---------------------- 505 (604)
...+.. .......++|+|....|.++.... .|.+ +..+.
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~--i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINI--PQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEEC--CCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeE--eccCCcCCCCCccCCCCCCCCccCccc
Confidence 111222 123467899999433444443321 2322 11111
Q ss_pred ---------eeeEeeccccceEEEEeeeCC------CCCcEEEEEeCCCcEEEEeCCCCcceEE--e-eCCCCCeeEEEE
Q psy10566 506 ---------LLRKFQGVTQGQFTIHSCFGG------ANQDFVASGSEDGKVYIWHVKRELPIAT--L-SGHTRTVSCVAW 567 (604)
Q Consensus 506 ---------~~~~~~~~~~~~~~i~~~~~~------~~~~~l~sgs~dg~I~iwd~~~~~~~~~--l-~~h~~~V~~v~~ 567 (604)
++..+..+. ....+ .+.. .+|+++++.-..+.|...++..++.+.. + ......+..+++
T Consensus 254 ~~~~~~~~~P~~~~~~~~-ap~G~--~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDSP-AVSGM--AFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp BSSCTTSCCCSEEESSCC-CEEEE--EEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred CCCCCCccCCeEEeCCCc-Cccee--EEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 011111111 11112 2211 2577777777788888888876554332 2 222357899999
Q ss_pred cCCCCcEEEEEe-CCCcEEEECC
Q psy10566 568 NPVYHQMIASVS-DDCTVRIWGP 589 (604)
Q Consensus 568 sp~~~~~l~s~s-~Dg~I~iW~~ 589 (604)
.|+ +.++++.. .+| +||.+
T Consensus 331 ~pd-G~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 331 GPD-GYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp CTT-SCEEEEECSTTE--EEEEE
T ss_pred CCC-CcEEEEEeCCCC--EEEEE
Confidence 999 55555432 344 44443
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.16 Score=49.77 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=71.9
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe----ccCCCCeeEEEECCC---CCeE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL----EGHTLGVAYLAWSPD---SSHL 362 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l----~~h~~~V~~l~~spd---~~~l 362 (604)
+...+.++...-...+.++|.|||+++++--..|.|++++.. .+....+..+ .........|+|+|+ +..|
T Consensus 20 ~~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~--~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~l 97 (347)
T 3das_A 20 SVKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAK--TGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMV 97 (347)
T ss_dssp CEEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTT--TCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEE
T ss_pred CCceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECC--CCcEeeecccCceeecCCCCceeeEeccccccCCEE
Confidence 344555565566788999999999977766448999888754 2233333322 223567899999995 3444
Q ss_pred EE-EeCCCceEEEEEECCCc----------eEEE-EecCCCCCCeEEEEEecCCCEEEEEec
Q psy10566 363 LV-VGPEDCHELWVWNIETE----------LLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGI 412 (604)
Q Consensus 363 ~s-~~~d~~~~i~vwd~~~~----------~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~ 412 (604)
.. -+......|.-|....+ +.+. .+..........++|.|||.++++.+.
T Consensus 98 Yv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 98 YAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 33 22211136777766541 1222 222121223467899999987777553
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.039 Score=53.33 Aligned_cols=228 Identities=10% Similarity=0.098 Sum_probs=117.1
Q ss_pred CeEEEEECC--CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC--ceEEEEEECCCceEEEEecC
Q psy10566 314 LKLATGSKD--TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED--CHELWVWNIETELLRVKLNH 389 (604)
Q Consensus 314 ~~lasgs~d--g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~--~~~i~vwd~~~~~~~~~~~~ 389 (604)
.+++.|+.+ ..+.+||.. +.++..+..+......-.++. -++..++.||.+. ...+.+||..++.....-..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPK--DYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp EEEEEECCSSTTSEEEEETT--TTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred eEEEEeCCCCCceEEEecCC--CCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 345556543 467888877 445554443332222222232 2566666666541 12799999998865443221
Q ss_pred CCCCCeEEEEEecCCCEEEEEecC------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC---------
Q psy10566 390 SPEDSLTSCSWNRDGTKFVCGGIR------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT--------- 451 (604)
Q Consensus 390 ~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~--------- 451 (604)
.....-.+++ .-+++.++.|+.+ ..+.+||............ +....+..-+++.++.|+.
T Consensus 89 p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 89 PTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEE
T ss_pred CccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccc
Confidence 1111111222 2367777888765 4688899876554443221 1111112235666666653
Q ss_pred CCeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEeee
Q psy10566 452 HHRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524 (604)
Q Consensus 452 dg~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~ 524 (604)
...+.+||..+..-...... ...-.+++.. +++.++.|+.+ ..+.+||+.+.+-.. +...........++.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM-VSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEE-CCCCSCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE-CCCCCCCccceeEEE
Confidence 34588999887643222211 1111122222 56677776653 358899988764221 111111111111122
Q ss_pred CCCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy10566 525 GGANQDFVASGSED-----GKVYIWHVKREL 550 (604)
Q Consensus 525 ~~~~~~~l~sgs~d-----g~I~iwd~~~~~ 550 (604)
-++.+++.|+.+ ..+.+||..+.+
T Consensus 246 --~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 246 --VGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp --ETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred --ECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 266788888754 468889988653
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.039 Score=53.20 Aligned_cols=229 Identities=12% Similarity=0.106 Sum_probs=114.9
Q ss_pred CCeEEEEECC----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---eEEEEEECCCceEEE
Q psy10566 313 GLKLATGSKD----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC---HELWVWNIETELLRV 385 (604)
Q Consensus 313 g~~lasgs~d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~~~~~~ 385 (604)
+.+++.|+.+ ..+.+||.. +.....+..+......-..+.+ ++..++.||.++. ..+.+||..+.+...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFK--EERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCc--CCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceee
Confidence 3455555543 357778876 3344443333322111122222 5666666664431 258999998876544
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC------
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT------ 451 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~------ 451 (604)
.-.......-.+++. -++..++.|+.++ .+.+||+........... +....+..-+++.++.|+.
T Consensus 92 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 92 VANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTE
T ss_pred CCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCc
Confidence 322111111122222 3677788887664 577888865544443221 1111112225666666654
Q ss_pred -CCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 452 -HHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 452 -dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
...+.+||..+..-..... ....-.+++. -+++.++.|+.+ ..+.+||+.+.+-.. +...........++
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVC 248 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEE
Confidence 2458899987754322211 1111112222 256777777654 368999998764322 11111111111111
Q ss_pred eCCCCCcEEEEEeCCC-----cEEEEeCCCCc
Q psy10566 524 FGGANQDFVASGSEDG-----KVYIWHVKREL 550 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg-----~I~iwd~~~~~ 550 (604)
. .++.+++.|+.++ .+.+||..+.+
T Consensus 249 ~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 249 A--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp E--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred E--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 1 3567777777653 48888887654
|
| >1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00031 Score=52.31 Aligned_cols=57 Identities=14% Similarity=0.333 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHcCChHHHHHHHhh
Q psy10566 86 DEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLND 143 (604)
Q Consensus 86 ~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~g~w~~~~~~l~~ 143 (604)
++|+.+-|++||..+||.+++.+|.+|.++..+.+... -...+++-+|..+.++-.+
T Consensus 10 ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~-ky~gLLEKKWTSViRLQKK 66 (88)
T 1uuj_A 10 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDK-KYAGLLEKKWTSVIRLQKK 66 (88)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHH-HHTTHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhh-hhhhhhhhhHHHHHHHHHH
Confidence 67999999999999999999999999999887743333 3456677789887775443
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.036 Score=53.56 Aligned_cols=225 Identities=11% Similarity=0.075 Sum_probs=117.4
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCeeeeeece---e
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR----GQFYQCDIEGQVLDSWEGV---R 433 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~---~ 433 (604)
.++.||.+....+++||..+++....-.... ......+..-++..++.|+.+ ..+..||............ +
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFE-KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSC-CCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCc-ccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 4555655433369999999887543322111 111112222367777888765 5788889866554443321 1
Q ss_pred EEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEec---------CCeE
Q psy10566 434 VNCLWCRSDGKSVLAADTH------HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVS---------TQGV 496 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~---------dg~I 496 (604)
....+..-+++.++.|+.+ ..+.+||..+..-...-. ....-.+++. .+++.++.|+. -..+
T Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCE
T ss_pred cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceE
Confidence 1111222366677777654 458899988764322211 1111112222 25666666653 3458
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcc--eEEeeCCCCCeeEEEEcC
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELP--IATLSGHTRTVSCVAWNP 569 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~--~~~l~~h~~~V~~v~~sp 569 (604)
.+||+.+.+-.. +...........++. .++++++.|+.+ ..+.+||..+.+- +..+........++.+
T Consensus 172 ~~yd~~~~~W~~-~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 172 EVYDPATETWTE-LCPMIEARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp EEEETTTTEEEE-ECCCSSCCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--
T ss_pred EEeCCCCCeEEE-CCCccchhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--
Confidence 899988764322 111111111111111 256677777654 4688999887542 2122212222233333
Q ss_pred CCCcEEEEEeCC-----CcEEEECCCCCC
Q psy10566 570 VYHQMIASVSDD-----CTVRIWGPHLNT 593 (604)
Q Consensus 570 ~~~~~l~s~s~D-----g~I~iW~~~~~~ 593 (604)
+ +.+++.|+.+ ..+.+||+.+.+
T Consensus 247 ~-~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 247 G-SIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp T-TEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred C-CEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 3 6788888854 468888887754
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.39 Score=49.25 Aligned_cols=147 Identities=13% Similarity=0.149 Sum_probs=86.8
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEECCC---CCeEEEEeCC---
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAWSPD---SSHLLVVGPE--- 368 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~spd---~~~l~s~~~d--- 368 (604)
-...+.++|.|+|+++++-...+.|++++.. ++....+..+.. .......|+|+|+ +..|.++...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~--~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPE--SGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT--TCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECC--CCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 4567899999999977765433468877654 233333333332 2456789999995 5555444321
Q ss_pred ----C----ceEEEEEECCCc-------eEEE-EecCCCCCCeEEEEEecCCCEEEEEec--------------------
Q psy10566 369 ----D----CHELWVWNIETE-------LLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGI-------------------- 412 (604)
Q Consensus 369 ----~----~~~i~vwd~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------------- 412 (604)
. ...|.-|+...+ +.+. .+..........++|.|||.++++.+.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~ 183 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPT 183 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccc
Confidence 0 125666665432 1222 122222234789999999998777553
Q ss_pred ------------CCeEEEEEcCCC-----------eeeeee-ce-eEEEEEEcCCCCEEEEE
Q psy10566 413 ------------RGQFYQCDIEGQ-----------VLDSWE-GV-RVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 413 ------------dg~i~iwd~~~~-----------~~~~~~-~~-~v~~l~~s~~g~~l~~~ 449 (604)
.|.|.-++.++. ....+. ++ ....++|.++|...++-
T Consensus 184 ~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d 245 (454)
T 1cru_A 184 QQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSE 245 (454)
T ss_dssp HHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEE
T ss_pred cccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEe
Confidence 245666666665 122222 33 58899999987755543
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.12 Score=50.18 Aligned_cols=226 Identities=8% Similarity=0.045 Sum_probs=115.0
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-----CC----ceEEEEEECCCceEEE
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP-----ED----CHELWVWNIETELLRV 385 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~-----d~----~~~i~vwd~~~~~~~~ 385 (604)
+++.|+ ..+.+||.. +..... ..+..........+...++..++.||. .. ...++.||..+++...
T Consensus 7 l~~~GG--~~~~~yd~~--~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 7 IFMISE--EGAVAYDPA--ANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEET--TEEEEEETT--TTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEcC--CceEEECCC--CCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 344554 568889887 444443 333322222333344457778888873 11 1138899998876543
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecC--------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC-C-
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIR--------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT-H- 452 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~-d- 452 (604)
.-.......-.+++. -++..++.|+.+ ..+.+||............ +....+...+++.++.|+. +
T Consensus 82 ~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 82 MPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp CCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTT
T ss_pred CCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCC
Confidence 221111111112222 266777777742 3588889865544433221 1112222345667777765 2
Q ss_pred ----CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecCC-----eEEEEecCCCceeeEeeccccceEEEE
Q psy10566 453 ----HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVSTQ-----GVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 453 ----g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg-----~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
..+.+||..+.+-..... ....-.+++. -+++.++.|+.++ .+.+||+.+.+-... ...........
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~ 238 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF-EAFPQERSSLS 238 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE-CCCSSCCBSCE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEEC-CCCCCccccee
Confidence 468999988754322211 1111112222 2667777777654 488999887643221 11111111111
Q ss_pred eeeCCCCCcEEEEEeCCC--------------cEEEEeCCCCc
Q psy10566 522 SCFGGANQDFVASGSEDG--------------KVYIWHVKREL 550 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg--------------~I~iwd~~~~~ 550 (604)
++. .++++++.|+.++ .|.+||..+.+
T Consensus 239 ~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 239 LVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 112 3567777777532 37788887654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.072 Score=51.27 Aligned_cols=226 Identities=12% Similarity=0.079 Sum_probs=114.1
Q ss_pred CeEEEEeCCC--ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece
Q psy10566 360 SHLLVVGPED--CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV 432 (604)
Q Consensus 360 ~~l~s~~~d~--~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~ 432 (604)
..++.||.+. ...+..||..+......-.......-.+++ .-++..++.|+.++ .+..||............
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 3445554322 125889999887644332211111111222 23677778887653 578888866554444321
Q ss_pred ---eEEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-------Ce
Q psy10566 433 ---RVNCLWCRSDGKSVLAADTHH-----RIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-------QG 495 (604)
Q Consensus 433 ---~v~~l~~s~~g~~l~~~~~dg-----~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-------g~ 495 (604)
+....+..-+++.++.|+.++ .+.+||..+..-..... ....-.+++. -+++.++.|+.+ ..
T Consensus 96 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 174 (302)
T 2xn4_A 96 RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLST 174 (302)
T ss_dssp SSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCC
T ss_pred CccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccE
Confidence 111111223567777776553 57888887654322211 1111112222 256666666542 35
Q ss_pred EEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcceEE--eeCCCCCeeEEEEc
Q psy10566 496 VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPIAT--LSGHTRTVSCVAWN 568 (604)
Q Consensus 496 I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~--l~~h~~~V~~v~~s 568 (604)
+.+||+.+.+-... ...........++. .++.+++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 175 ~~~yd~~~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~- 250 (302)
T 2xn4_A 175 VECYNATTNEWTYI-AEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV- 250 (302)
T ss_dssp EEEEETTTTEEEEE-CCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred EEEEeCCCCcEEEC-CCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE-
Confidence 88999887643221 11111111111111 356777887764 4689999987543221 1111111122222
Q ss_pred CCCCcEEEEEeCCC-----cEEEECCCCCC
Q psy10566 569 PVYHQMIASVSDDC-----TVRIWGPHLNT 593 (604)
Q Consensus 569 p~~~~~l~s~s~Dg-----~I~iW~~~~~~ 593 (604)
+ +.+++.|+.++ .+.+||+.+.+
T Consensus 251 -~-~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 251 -N-GLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp -T-TEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -C-CEEEEECCcCCCcccccEEEEcCCCCe
Confidence 3 67788887654 48888887654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.095 Score=50.81 Aligned_cols=215 Identities=7% Similarity=0.003 Sum_probs=110.3
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-----C------CeEEEEEcCCCeeeeeece---eEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-----R------GQFYQCDIEGQVLDSWEGV---RVNCL 437 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----d------g~i~iwd~~~~~~~~~~~~---~v~~l 437 (604)
.+..||..+++....-...........+...++..++.|+. . ..+..||............ +....
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 59999999987544221111123333344457788888884 1 1267788865544433221 11111
Q ss_pred EEcCCCCEEEEEeCC--------CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEec-C-----CeEEEEec
Q psy10566 438 WCRSDGKSVLAADTH--------HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVS-T-----QGVHLWDL 501 (604)
Q Consensus 438 ~~s~~g~~l~~~~~d--------g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~-d-----g~I~lwd~ 501 (604)
+..-+++.++.|+.+ ..+.+||..+.+-..... ....-.+++. .+++.++.|+. + ..+.+||+
T Consensus 94 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 94 LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeC
Confidence 122256666666632 458899988754222211 1111112222 35667777765 2 45899998
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC-----cEEEEeCCCCcceEE--eeCCCCCeeEEEEcCCCCcE
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG-----KVYIWHVKRELPIAT--LSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg-----~I~iwd~~~~~~~~~--l~~h~~~V~~v~~sp~~~~~ 574 (604)
.+.+-.. +...........++. .++++++.|+.++ .+.+||..+.+-... +.........+.+ + +.+
T Consensus 173 ~~~~W~~-~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~l 246 (315)
T 4asc_A 173 KKFEWKE-LAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--V-GTL 246 (315)
T ss_dssp TTTEEEE-CCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-TEE
T ss_pred CCCeEEE-CCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--C-CEE
Confidence 8763221 111111111111111 2667788887654 588999887642222 1111122223333 3 577
Q ss_pred EEEEeCCC--------------cEEEECCCCCC
Q psy10566 575 IASVSDDC--------------TVRIWGPHLNT 593 (604)
Q Consensus 575 l~s~s~Dg--------------~I~iW~~~~~~ 593 (604)
++.|+.++ .|.+||+.+.+
T Consensus 247 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 247 YAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 77777642 36778887653
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.31 Score=47.95 Aligned_cols=170 Identities=9% Similarity=0.064 Sum_probs=96.0
Q ss_pred eEEEEEECCC--ceEE-EEecCC----CCCCeEEEEEec--CCC-EEEEE-ec--CCeEEEEEc--CCCee---eeeece
Q psy10566 371 HELWVWNIET--ELLR-VKLNHS----PEDSLTSCSWNR--DGT-KFVCG-GI--RGQFYQCDI--EGQVL---DSWEGV 432 (604)
Q Consensus 371 ~~i~vwd~~~--~~~~-~~~~~~----~~~~v~~~~~~~--~~~-~l~s~-~~--dg~i~iwd~--~~~~~---~~~~~~ 432 (604)
+.|.++|..+ ++.. ..+... .......+.+.+ ++. +|+++ .. +.+|.+|++ .+... ..+.+.
T Consensus 83 G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~ 162 (355)
T 3sre_A 83 GKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK 162 (355)
T ss_dssp CEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT
T ss_pred CeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccC
Confidence 3899999874 2221 122211 123577888776 454 34444 33 457778776 33332 233332
Q ss_pred ---eEEEEEEcCCCCEEEEEeC-----------------CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe-
Q psy10566 433 ---RVNCLWCRSDGKSVLAADT-----------------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV- 491 (604)
Q Consensus 433 ---~v~~l~~s~~g~~l~~~~~-----------------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 491 (604)
..+++.+.++|...++... .|.|..+|. .+.......-...+.++|+||++.++++.
T Consensus 163 ~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 163 LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeC
Confidence 5889999999987776541 245555554 23333333345678999999998887765
Q ss_pred cCCeEEEEecCC-Cce--eeEeeccccceEEEEeeeCCC-CCcEEEEEeCC-CcEEEEeC
Q psy10566 492 STQGVHLWDLRD-RIL--LRKFQGVTQGQFTIHSCFGGA-NQDFVASGSED-GKVYIWHV 546 (604)
Q Consensus 492 ~dg~I~lwd~~~-~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~d-g~I~iwd~ 546 (604)
..+.|+.|++.. +.. .+.+.. .. ...-+...+ +|++.+++..+ +.|..|+.
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~~~-~g---~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVLSF-DT---LVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEEC-SS---EEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred CCCeEEEEEECCCCcEecCEEEeC-CC---CCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 468899999864 322 122311 11 112233356 58777766544 34444443
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.092 Score=50.74 Aligned_cols=229 Identities=11% Similarity=0.019 Sum_probs=115.2
Q ss_pred CCCCeEEEEECC----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC----CC---ceEEEEEECC
Q psy10566 311 PDGLKLATGSKD----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP----ED---CHELWVWNIE 379 (604)
Q Consensus 311 pdg~~lasgs~d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~----d~---~~~i~vwd~~ 379 (604)
-++.+++.|+.+ ..+.+||.. +.....+..+......-..+.+ ++..++.||. ++ ...+++||..
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPS--NGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCC--CCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 355666666632 357888876 4455444333322111222222 5666666665 21 1158999998
Q ss_pred CceEEEEecCCC-CCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEe
Q psy10566 380 TELLRVKLNHSP-EDSLTSCSWNRDGTKFVCGGIR-----GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 380 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~ 450 (604)
+......-.... ......+. -+++.++.|+.+ ..+..||+........... +....+..-+++.++.|+
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeC
Confidence 876443322111 11122222 267777777654 3578888865544433221 111111112566677766
Q ss_pred CC-----CeEEEEEcCCCccccccc--C-CCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccce
Q psy10566 451 TH-----HRIRTYNFEHLTDSNLLQ--E-DHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQ 517 (604)
Q Consensus 451 ~d-----g~I~i~d~~~~~~~~~~~--~-~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~ 517 (604)
.+ ..+.+||..+.+-..... . ......+.+ +++.++.|+.+ ..+.+||+.+.+-.. +.......
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r 253 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF-VAPMKHRR 253 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE-CCCCSSCC
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE-CCCCCCCc
Confidence 54 458899987754322211 1 111222222 66777777654 459999998764322 11111111
Q ss_pred EEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy10566 518 FTIHSCFGGANQDFVASGSED-----GKVYIWHVKREL 550 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~ 550 (604)
....++. .++++++.|+.+ ..+.+||..+.+
T Consensus 254 ~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 254 SALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred cceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1111111 256777777654 357778877643
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.081 Score=52.73 Aligned_cols=144 Identities=12% Similarity=0.111 Sum_probs=95.2
Q ss_pred EcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce----
Q psy10566 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---- 382 (604)
Q Consensus 309 fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---- 382 (604)
.+.+|..++.+ .++.||.-++.+.. ..+ ...+.. .-..|..+..+|+|++|+..+..+ |.|..+..+.
T Consensus 28 ~~~n~t~i~~a-~~n~iR~~~i~~~~-~Yk-~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~---V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 28 SSQNGTRIVFI-QDNIIRWYNVLTDS-LYH-SLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE---IFVMEVPWGYSNVE 101 (452)
T ss_dssp EETTTTEEEEE-ETTEEEEEETTTCS-SCE-EEECTTTCCCCTTCEEEECTTSSEEEEECSSE---EEEEECCTTCSCCC
T ss_pred EEcCCCEEEEE-ECCEEEEEECCCCC-cce-EEecCcccccCceeEEEECCCCCEEEEecCCe---EEEEEecCccccCc
Confidence 34566666665 36788887877332 222 222322 123688899999999999988774 8887776221
Q ss_pred --------EEEEecCC-----CCCCeEEEEEec---CCCEEEEEecCCeEEEEEcCC---Cee------eeeec----ee
Q psy10566 383 --------LRVKLNHS-----PEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIEG---QVL------DSWEG----VR 433 (604)
Q Consensus 383 --------~~~~~~~~-----~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~---~~~------~~~~~----~~ 433 (604)
....+..+ ...+|..+.|+| .+..|++-..|+.|++||+.. +.. ..+.. ..
T Consensus 102 ~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVND 181 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCC
T ss_pred ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccce
Confidence 11122211 356799999999 457899999999999999953 111 11111 36
Q ss_pred EEEEEEcCCCCEEEEEe--CCCeEEEE
Q psy10566 434 VNCLWCRSDGKSVLAAD--THHRIRTY 458 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~--~dg~I~i~ 458 (604)
+.+++|.+++-.+.+.+ ..|.|+-.
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 88999999988888855 77887654
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.2 Score=57.62 Aligned_cols=229 Identities=15% Similarity=0.154 Sum_probs=135.4
Q ss_pred EEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--Ceeeeee
Q psy10566 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWE 430 (604)
Q Consensus 353 l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~ 430 (604)
.-.+|..+.++.-+ .. ++.++|+++...+..+. ...+|.--.|-.+...-++ .+..|+.|++.| .+.+.+.
T Consensus 71 AIMnP~~~iiALra-g~--~lQiFnl~~k~klks~~--~~e~VvfWkWis~~~l~lV--T~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GK--TLQIFNIEMKSKMKAHT--MTDDVTFWKWISLNTVALV--TDNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hccCCCcceEEEec-CC--eEEEeehHHhhhhcccc--cCCCceEEEecCCCeeEEE--cCCeEEEeccCCCCccHHHHh
Confidence 44678877666654 33 79999999987776665 2356777777654443322 246799999964 3333332
Q ss_pred ------ceeEEEEEEcCCCCEEEEEe-------CCCeEEEEEcCCCcccccccCCCCeeEEEEC--CC-CCEEEEEec--
Q psy10566 431 ------GVRVNCLWCRSDGKSVLAAD-------THHRIRTYNFEHLTDSNLLQEDHPVMSFTID--AT-DRLALLNVS-- 492 (604)
Q Consensus 431 ------~~~v~~l~~s~~g~~l~~~~-------~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s--~~-~~~l~~~~~-- 492 (604)
+..|.....+++.++++..+ -.|.+.+|..+......+-+|......+.+. +. ...+..+..
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 44788889999999977554 3488999998876655554443333333222 11 122222222
Q ss_pred -CCeEEEEecCCC---cee------eE-eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC
Q psy10566 493 -TQGVHLWDLRDR---ILL------RK-FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561 (604)
Q Consensus 493 -dg~I~lwd~~~~---~~~------~~-~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~ 561 (604)
.+.++|.++... .+. .. +.......+++.. ..++.-.++..-+.-|.|++||+.+|.++..-+-...+
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~-~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~ 302 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM-QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 302 (1630)
T ss_pred CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEE-EeccccCEEEEEecCceEEEEecccchhhhhccccCCc
Confidence 367888888543 111 00 1111122333432 33456668888889999999999999988766655556
Q ss_pred eeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 562 VSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 562 V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|...+-+...+. ++.....|.|.--.++
T Consensus 303 iF~~~~~~~~~g-~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 303 IFVTAPHEATAG-IIGVNRKGQVLSVCVE 330 (1630)
T ss_pred eEEeccCCCCCc-eEEEcCCceEEEEEEc
Confidence 655554443233 3333355555444443
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.84 Score=50.23 Aligned_cols=230 Identities=9% Similarity=0.110 Sum_probs=129.0
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL 426 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 426 (604)
...|.+|.-..+|. +-.++.+| +..||-.+-+............|.++....++ .|.+|+.+| +..||......
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G---L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f 94 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG---LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRY 94 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC---EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEE
T ss_pred cceEEEEEECCCCC-EEEEECCC---ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEE
Confidence 45689998888774 45566777 77787433221111111123458887776665 566666655 77888854433
Q ss_pred eeee---ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-----cCCCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 427 DSWE---GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-----QEDHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 427 ~~~~---~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
.... ...|.++.. .+| .+..++.+ .+..||..+....... .....|.++....++...+ ++. +.+..
T Consensus 95 ~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~ 169 (758)
T 3ott_A 95 EQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCR 169 (758)
T ss_dssp CCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEE
T ss_pred ECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhh
Confidence 2211 123565544 344 46666655 6888888765433221 1235688888888777554 554 45888
Q ss_pred EecCCCceeeEeecccc---ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 499 WDLRDRILLRKFQGVTQ---GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
||..++.... +..... ....+.+++...++..|..|+. +-+..+|..+++...........|.++...++ +.+.
T Consensus 170 ~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lW 246 (758)
T 3ott_A 170 YIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGN-GDLL 246 (758)
T ss_dssp EETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTT-CCEE
T ss_pred CccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCC-CCEE
Confidence 8887664322 211110 1112344444455565555654 45888998776532211112345888888777 4444
Q ss_pred EEEeCCCcEEEECCCCC
Q psy10566 576 ASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~~ 592 (604)
+ |+.+ -+.+++..++
T Consensus 247 i-gT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 247 A-GTDN-GLYVYHNDTT 261 (758)
T ss_dssp E-EETT-EEEEECCTTS
T ss_pred E-EeCC-ceeEEecCCC
Confidence 3 4444 4778887654
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.088 Score=52.07 Aligned_cols=238 Identities=12% Similarity=0.060 Sum_probs=116.2
Q ss_pred CCCeEEEEECC-CeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeC-C---C----ceEEEEEECCCc
Q psy10566 312 DGLKLATGSKD-TTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGP-E---D----CHELWVWNIETE 381 (604)
Q Consensus 312 dg~~lasgs~d-g~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~-d---~----~~~i~vwd~~~~ 381 (604)
++++++.|+.+ ..+.++|....+..+..+..+. .....-.++.+ ++..++.||. + + ...+++||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 66666777644 4577888753234555444444 11122222222 5666666665 2 1 125999999987
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecC---------------------------------------CeEEEEEcC
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---------------------------------------GQFYQCDIE 422 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------------------g~i~iwd~~ 422 (604)
+................+...+++.++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 75443322211112222223577888888765 478889986
Q ss_pred CCeeeeeece---eEE-EEEEcCCCCEEEEEeC------CCeEEEEEc--CCCcccccc--cCC-CCeeEEEECCCCCEE
Q psy10566 423 GQVLDSWEGV---RVN-CLWCRSDGKSVLAADT------HHRIRTYNF--EHLTDSNLL--QED-HPVMSFTIDATDRLA 487 (604)
Q Consensus 423 ~~~~~~~~~~---~v~-~l~~s~~g~~l~~~~~------dg~I~i~d~--~~~~~~~~~--~~~-~~i~~~~~s~~~~~l 487 (604)
.......... +.. ..+..-+++.++.|+. ...+..||+ .+..-.... ... ......+...+++.+
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iy 256 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLI 256 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEE
T ss_pred CCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEE
Confidence 5544433221 111 1122235566666553 345777876 333211111 111 111111223356677
Q ss_pred EEEecC----------------------CeEEEEecCCCcee--eEeeccccceEEEEeeeCCCCCcEEEEEeCCC----
Q psy10566 488 LLNVST----------------------QGVHLWDLRDRILL--RKFQGVTQGQFTIHSCFGGANQDFVASGSEDG---- 539 (604)
Q Consensus 488 ~~~~~d----------------------g~I~lwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg---- 539 (604)
+.|+.+ ..+.+||+.+.+-. ..+......... +. .++++++.|+.++
T Consensus 257 v~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~---~~--~~~~i~v~GG~~~~~~~ 331 (357)
T 2uvk_A 257 FAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS---LP--WNNSLLIIGGETAGGKA 331 (357)
T ss_dssp EECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE---EE--ETTEEEEEEEECGGGCE
T ss_pred EEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee---EE--eCCEEEEEeeeCCCCCE
Confidence 777632 24788998865422 222211111111 11 3677888888653
Q ss_pred --cEEEEeCCCCcceEEee
Q psy10566 540 --KVYIWHVKRELPIATLS 556 (604)
Q Consensus 540 --~I~iwd~~~~~~~~~l~ 556 (604)
.|.++++++++.+....
T Consensus 332 ~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 332 VTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEEEEEC-CCSCEEEC-
T ss_pred eeeEEEEEEcCcEeEeeec
Confidence 46667888877665543
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=96.65 E-value=1.1 Score=49.24 Aligned_cols=262 Identities=12% Similarity=0.125 Sum_probs=150.8
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
...|.++.-..+|. |-.|+.+| +..||-. ........ ......|.++.-..++ .|..++.+| +..||..
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~----~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G---l~~yd~~ 90 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGY----STQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG---ILVYNYR 90 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSS----CEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE---EEEEETT
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCC----ceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC---eEEEeCC
Confidence 46799999888886 44456677 5556633 21111000 1123468888777766 455566665 8899998
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-------ceeEEEEEEcCCCCEEEEEeCC
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-------GVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~v~~l~~s~~g~~l~~~~~d 452 (604)
+...... .......|.++.. .++ .+..++.+ -+..+|.....+..+. ...|.++....+|...+ ++.
T Consensus 91 ~~~f~~~-~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~- 164 (758)
T 3ott_A 91 ADRYEQP-ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY- 164 (758)
T ss_dssp TTEECCC-SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-
T ss_pred CCEEECc-ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-
Confidence 8754321 1112234666654 344 56666665 5788888654444441 23578888888887555 444
Q ss_pred CeEEEEEcCCCccccccc------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCC
Q psy10566 453 HRIRTYNFEHLTDSNLLQ------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGG 526 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~ 526 (604)
+-+..|+..+........ ....|.++...+++..+.+|+. +.+..+|..+++... +... ....+.++...
T Consensus 165 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l--~~~~i~~i~~d 240 (758)
T 3ott_A 165 NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAF--HNNSIKSLALD 240 (758)
T ss_dssp TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEE--EEEEEEEEEEC
T ss_pred CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCC--CCCeEEEEEEc
Confidence 457788876543222111 1234788888887777777774 468889987764432 2211 11235555555
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--------CCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 527 ANQDFVASGSEDGKVYIWHVKRELPIATLSG--------HTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 527 ~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--------h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.+|.+ ..|+.+ -+.+++..+++.. .+.. ....|.++....+ +.+ ..|+..| +.+..
T Consensus 241 ~~g~l-WigT~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~-g~l-WiGT~~G-l~~~~ 304 (758)
T 3ott_A 241 GNGDL-LAGTDN-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQE-HNI-WLGTDYG-ISLSR 304 (758)
T ss_dssp TTCCE-EEEETT-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTT-CCE-EEEESSS-EEEEC
T ss_pred CCCCE-EEEeCC-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCC-CCE-EEEeCCc-ccccc
Confidence 56654 445554 5888988765432 2211 1245888888876 443 3444556 54443
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.088 Score=50.62 Aligned_cols=187 Identities=9% Similarity=0.004 Sum_probs=100.2
Q ss_pred CCCeEEEEECC-----CeEEEEEeCCCCce---eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---eEEEEEECCC
Q psy10566 312 DGLKLATGSKD-----TTVIIWDVDPVTFT---CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC---HELWVWNIET 380 (604)
Q Consensus 312 dg~~lasgs~d-----g~i~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~ 380 (604)
++.+++.|+.+ ..+.+||.. +.. ...+..+........++.+ ++..++.+|.++. ..+.+||..+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~--~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYT--ADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETT--CCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECC--CCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCC
Confidence 56777777755 358888877 333 4444333322222222333 5666666665431 2699999988
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCC
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-----GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~d 452 (604)
.+....-.......-.+++ ..+++.++.|+.+ ..+..||+........... +....+...+++.++.|+.+
T Consensus 138 ~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 216 (301)
T 2vpj_A 138 DQWSMLGDMQTAREGAGLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFD 216 (301)
T ss_dssp TEEEEEEECSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CeEEECCCCCCCcccceEE-EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCC
Confidence 7644332211111111222 2367778888765 3588899866554443321 11111222356677777654
Q ss_pred -----CeEEEEEcCCCccccccc--C-CCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCc
Q psy10566 453 -----HRIRTYNFEHLTDSNLLQ--E-DHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRI 505 (604)
Q Consensus 453 -----g~I~i~d~~~~~~~~~~~--~-~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~ 505 (604)
..+.+||..+.+-..... . ......+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 468999998764332221 1 111122222 56677777655 357888887653
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.34 Score=46.86 Aligned_cols=226 Identities=11% Similarity=0.061 Sum_probs=111.6
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC----Cc-----eEEEEEECCCceEEE
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE----DC-----HELWVWNIETELLRV 385 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d----~~-----~~i~vwd~~~~~~~~ 385 (604)
+++.|+. .+.+||.. +.+... ..+..........+...++..++.||.. +. ..+.+||..+.+...
T Consensus 18 i~~~GG~--~~~~yd~~--~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 92 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPM--ENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG 92 (318)
T ss_dssp EEEECSS--EEEEEETT--TTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred hhhcccc--ceEEECCC--CCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence 3444443 37788877 444443 2232212222233345577777887731 10 128889998876544
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecC-------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC----
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIR-------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT---- 451 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~---- 451 (604)
.-.......-.+++. -++..++.|+.+ ..+.+||............ +....+...+++.++.|+.
T Consensus 93 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 93 LPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDK 171 (318)
T ss_dssp CSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSS
T ss_pred CCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCC
Confidence 322111111122222 267777777764 2577888865544433221 1111222246666676654
Q ss_pred --CCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 452 --HHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 452 --dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
...+.+||..+.+-..... ....-.+++. -+++.++.|+.+ ..+.+||+.+.+-.. +...........+
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~ 249 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV-MTEFPQERSSISL 249 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEE-CCCCSSCCBSCEE
T ss_pred CccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEE-CCCCCCcccceEE
Confidence 2458999988764322211 1111112222 256777777643 347889988764222 1111111111111
Q ss_pred eeCCCCCcEEEEEeCC--------------CcEEEEeCCCCc
Q psy10566 523 CFGGANQDFVASGSED--------------GKVYIWHVKREL 550 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~d--------------g~I~iwd~~~~~ 550 (604)
+. .++++++.|+.+ ..+.+||..+.+
T Consensus 250 ~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 250 VS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 11 356677777654 357788877654
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.098 Score=50.55 Aligned_cols=227 Identities=11% Similarity=0.003 Sum_probs=115.3
Q ss_pred CCCeEEEEeCCC--ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec----C-----CeEEEEEcCCCee
Q psy10566 358 DSSHLLVVGPED--CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI----R-----GQFYQCDIEGQVL 426 (604)
Q Consensus 358 d~~~l~s~~~d~--~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d-----g~i~iwd~~~~~~ 426 (604)
++..++.||..+ ...+.+||..+.+....-.......-.+++ ..++..++.|+. + ..+.+||+.....
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 455666666311 126899999887754432211111111222 236777777776 3 3578888865544
Q ss_pred eeeece---eEEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCccccccc--C-CCCeeEEEECCCCCEEEEEecC--
Q psy10566 427 DSWEGV---RVNCLWCRSDGKSVLAADTH-----HRIRTYNFEHLTDSNLLQ--E-DHPVMSFTIDATDRLALLNVST-- 493 (604)
Q Consensus 427 ~~~~~~---~v~~l~~s~~g~~l~~~~~d-----g~I~i~d~~~~~~~~~~~--~-~~~i~~~~~s~~~~~l~~~~~d-- 493 (604)
...... +....+..-+++.++.|+.+ ..+.+||..+.+-..... . ......+.+ +++.++.|+.+
T Consensus 103 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 180 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGT 180 (308)
T ss_dssp EECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred eECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCC
Confidence 433221 11111112256666666543 458889987754322211 1 111122222 56777777654
Q ss_pred ---CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcceE--EeeCCCCCee
Q psy10566 494 ---QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPIA--TLSGHTRTVS 563 (604)
Q Consensus 494 ---g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~--~l~~h~~~V~ 563 (604)
..+.+||+.+.+-... ...........++. -++.+++.|+.+ ..+.+||..+.+-.. .+........
T Consensus 181 ~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 257 (308)
T 1zgk_A 181 NRLNSAECYYPERNEWRMI-TAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG 257 (308)
T ss_dssp CBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred CcCceEEEEeCCCCeEeeC-CCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceE
Confidence 4588999877643211 11111111111122 256777777764 569999988754221 1111111222
Q ss_pred EEEEcCCCCcEEEEEeCC-----CcEEEECCCCCC
Q psy10566 564 CVAWNPVYHQMIASVSDD-----CTVRIWGPHLNT 593 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s~D-----g~I~iW~~~~~~ 593 (604)
.+.+ + +.+++.|+.+ ..+.+||+.+.+
T Consensus 258 ~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 258 ITVH--Q-GRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEE--T-TEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEE--C-CEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 2232 3 6777887754 357788887653
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.27 Score=47.55 Aligned_cols=215 Identities=11% Similarity=0.033 Sum_probs=107.6
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec----CC-------eEEEEEcCCCeeeeeece---eEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI----RG-------QFYQCDIEGQVLDSWEGV---RVNCL 437 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg-------~i~iwd~~~~~~~~~~~~---~v~~l 437 (604)
.+..||..+++....-...............++..++.|+. ++ .+..||............ +....
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 48999999887544221111122233334457788888873 12 267788865544433221 11111
Q ss_pred EEcCCCCEEEEEeCC-------CeEEEEEcCCCcccccccCCCC--eeEEEECCCCCEEEEEec------CCeEEEEecC
Q psy10566 438 WCRSDGKSVLAADTH-------HRIRTYNFEHLTDSNLLQEDHP--VMSFTIDATDRLALLNVS------TQGVHLWDLR 502 (604)
Q Consensus 438 ~~s~~g~~l~~~~~d-------g~I~i~d~~~~~~~~~~~~~~~--i~~~~~s~~~~~l~~~~~------dg~I~lwd~~ 502 (604)
+..-+++.++.|+.+ ..+.+||..+.+-........+ -.+++. .+++.++.|+. -..+.+||+.
T Consensus 105 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 105 LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred eEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 112256677777653 3578888877543322111111 112222 36666677654 2358999998
Q ss_pred CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcce--EEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPI--ATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~--~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
+.+-... ...........++. .++++++.|+.+ ..+.+||..+.+-. ..+.........+.+ + +.++
T Consensus 184 ~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~ 257 (318)
T 2woz_A 184 KGDWKDL-APMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--A-GSLY 257 (318)
T ss_dssp TTEEEEE-CCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--T-TEEE
T ss_pred CCEEEEC-CCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--C-CEEE
Confidence 7643221 11111111111111 256777777654 35778998865422 112211122222333 2 5777
Q ss_pred EEEeCC--------------CcEEEECCCCCC
Q psy10566 576 ASVSDD--------------CTVRIWGPHLNT 593 (604)
Q Consensus 576 ~s~s~D--------------g~I~iW~~~~~~ 593 (604)
+.|+.+ ..+.+||+.+.+
T Consensus 258 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 258 AIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 777754 347778887643
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.84 Score=43.79 Aligned_cols=178 Identities=12% Similarity=0.060 Sum_probs=106.4
Q ss_pred EEEcCCCCeEEEEECC--------------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe--CCCc
Q psy10566 307 CKFSPDGLKLATGSKD--------------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG--PEDC 370 (604)
Q Consensus 307 v~fspdg~~lasgs~d--------------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~--~d~~ 370 (604)
--++++|.+|+.+... ..|+..+++ ...... +.. . .+..|+++++.|+-+. .++.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d--g~~~~~---l~~--~--~~~~~s~~g~~Iy~~~~~~~~~ 128 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN--GHGSTV---LDP--D--PCIYASLIGNYIYYLHYDTQTA 128 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT--SCCCEE---EEC--S--CEEEEEEETTEEEEEEESSSSC
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC--CCcceE---eec--C--CccEEEEeCCEEEEEeecCCCC
Confidence 4568889988877543 245555554 222222 221 1 1236788999988876 3443
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~ 449 (604)
..|+..++.......... . . + .+|+++++.|+-.+. ...|...++++...+.+...... ..+.|++.+++..
T Consensus 129 ~~Iy~~~~dGs~~~~lt~-~-~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 129 TSLYRIRIDGEEKKKIKN-H-Y--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp EEEEEEETTSCCCEEEES-S-C--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEEEE
T ss_pred ceEEEEECCCCCeEEEeC-C-C--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEE
Confidence 578888887554433333 1 1 2 456788888886665 57888888877654444322222 2356889988877
Q ss_pred eCC--CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCC
Q psy10566 450 DTH--HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDR 504 (604)
Q Consensus 450 ~~d--g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~ 504 (604)
... ..|..-++.......+.. ..+ ..++|++..|+.+.. .+.|...++...
T Consensus 202 ~~~~~~~I~~~~ldG~~~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 202 DVNRDNAIVHVNINNPNPVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EGGGTTEEEEECSSSCCCEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EcCCCcEEEEEECCCCCeEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 654 367777776655444432 233 347788888876533 355666666543
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.081 Score=51.66 Aligned_cols=189 Identities=8% Similarity=-0.034 Sum_probs=102.5
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe--c-CCCEEEEE-ecCCeEEEEEcC-CCeeeeeecee-
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN--R-DGTKFVCG-GIRGQFYQCDIE-GQVLDSWEGVR- 433 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~s~-~~dg~i~iwd~~-~~~~~~~~~~~- 433 (604)
..+++++.|| .|+-+|..+|+..-.+......++....-. + ++..++.. +.||.+..++.. |.....+.-..
T Consensus 11 ~~V~v~t~dG--~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEG--GLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTS--CEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCC--eEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 3677888888 899999999998888764311222221100 1 22333333 589999999974 42221111110
Q ss_pred E--EEEEE-----------cCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCee--------EEEEC-----CCCCEE
Q psy10566 434 V--NCLWC-----------RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVM--------SFTID-----ATDRLA 487 (604)
Q Consensus 434 v--~~l~~-----------s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~--------~~~~s-----~~~~~l 487 (604)
+ .-+.. ...+..+++++.+|++...|..+++.........+.. |.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 0 00111 0146678999999999999999988776665432211 11111 124567
Q ss_pred EEEecCCeEEEEecCCCceeeEee--ccccceE--EEE-eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE
Q psy10566 488 LLNVSTQGVHLWDLRDRILLRKFQ--GVTQGQF--TIH-SCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~~~~~~~~--~~~~~~~--~i~-~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~ 553 (604)
+.+..+..+.+.+ ++++ +-.+. ....... .+. ....+.++.+ +.++.||.|+-+|..+|+.+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 7777777777777 4553 21111 0000000 000 0001124555 457889999999988888765
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.10 E-value=1.5 Score=44.85 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=61.9
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEE--EEecCC-----CCCCeEEEEEecC---CCEEEEEec-----
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLR--VKLNHS-----PEDSLTSCSWNRD---GTKFVCGGI----- 412 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~--~~~~~~-----~~~~v~~~~~~~~---~~~l~s~~~----- 412 (604)
.....|+|.|+|+.+++-...+ .|++++..++... ..+... .......++|+|+ +..|.++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg--~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATG--KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTC--EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCC--EEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3567999999998776644333 6888887655432 222211 2355779999995 555544432
Q ss_pred --------CCeEEEEEcCC---C-----e-eeeee---ceeEEEEEEcCCCCEEEEEeC
Q psy10566 413 --------RGQFYQCDIEG---Q-----V-LDSWE---GVRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 413 --------dg~i~iwd~~~---~-----~-~~~~~---~~~v~~l~~s~~g~~l~~~~~ 451 (604)
...|.-++.+. . . +..+. .|....++|.|||...++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 23566665531 1 1 11121 256889999999997777553
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.29 Score=44.10 Aligned_cols=147 Identities=10% Similarity=-0.010 Sum_probs=83.8
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCe--------eEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPV--------MSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i--------~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.+.+++|+|+|...++ .+|.++-.+..+............| ..+.|.|+|.+.++ .||.|+-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5679999998885555 7788777776553333322222333 78999999998888 6699988886432
Q ss_pred ceeeE-----eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc------ceEEee-CCCCCeeEEEEcCCCC
Q psy10566 505 ILLRK-----FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL------PIATLS-GHTRTVSCVAWNPVYH 572 (604)
Q Consensus 505 ~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~------~~~~l~-~h~~~V~~v~~sp~~~ 572 (604)
..-.- ..+.... ..+..+++.|+|.+.+.. |+.++-+...++. ....+- ..-..-.-+.|.|+ +
T Consensus 118 ~~~~Wl~~a~~vg~~gw-~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~-G 193 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGW-SGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV-G 193 (236)
T ss_dssp TTCCHHHHSEEEECSSG-GGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT-S
T ss_pred CCCceeccccEeccCCC-CceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC-C
Confidence 21110 0000000 023567778999877666 8876544333221 111111 22233455779998 6
Q ss_pred cEEEEEeCCCcEEEECCCC
Q psy10566 573 QMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.+.. +| ++|....
T Consensus 194 ~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 194 TLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp CEEEEE--TT--EEEEESC
T ss_pred cEEEEe--CC--eEEecCC
Confidence 665554 77 4444433
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.3 Score=56.08 Aligned_cols=230 Identities=14% Similarity=0.201 Sum_probs=131.6
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
.-.+|..+.+|.-. ..++.|+|++ +...++.+.- ..+|..=.|-.+. .|+..+.. .|+-|++.......+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~----~k~klks~~~-~e~VvfWkWis~~-~l~lVT~~---aVyHW~~~~~s~P~k 140 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIE----MKSKMKAHTM-TDDVTFWKWISLN-TVALVTDN---AVYHWSMEGESQPVK 140 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehH----Hhhhhccccc-CCCceEEEecCCC-eeEEEcCC---eEEEeccCCCCccHH
Confidence 34567777666654 6789999998 3333344332 3467777776544 45555555 499999975332222
Q ss_pred ecCCC----CCCeEEEEEecCCCEEEEEe-------cCCeEEEEEcCCCeeeeeeceeEEEEEEc----CCCCEEEE-Ee
Q psy10566 387 LNHSP----EDSLTSCSWNRDGTKFVCGG-------IRGQFYQCDIEGQVLDSWEGVRVNCLWCR----SDGKSVLA-AD 450 (604)
Q Consensus 387 ~~~~~----~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~v~~l~~s----~~g~~l~~-~~ 450 (604)
+...| ...|..-..+++.++++..| ..|.+.+|..+.+..+.+.||...-..+. +....+++ +.
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEE
Confidence 21112 34577777788888887654 34788999998777666666622111111 11122222 21
Q ss_pred C---CCeEEEEEcCCC-ccccc---------ccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 451 T---HHRIRTYNFEHL-TDSNL---------LQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 451 ~---dg~I~i~d~~~~-~~~~~---------~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
. .+++++.++... ..... +.. ..-..++.+++....+..-+.-|.|++||+.++.++..-.-..
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~ 300 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccC
Confidence 1 368999988653 11000 111 2223467778888889999999999999999998875444333
Q ss_pred cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
..++.. +...+.+. +++....|.|.--.+...
T Consensus 301 ~~iF~~--~~~~~~~g-~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 301 ETIFVT--APHEATAG-IIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred CceEEe--ccCCCCCc-eEEEcCCceEEEEEEccc
Confidence 322221 22222333 333335565555554443
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.86 E-value=1.5 Score=45.27 Aligned_cols=189 Identities=6% Similarity=0.038 Sum_probs=110.8
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe--cCCCEEEEEecC-------CeE---------EEE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN--RDGTKFVCGGIR-------GQF---------YQC 419 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d-------g~i---------~iw 419 (604)
||++|+.-...+ .+|-..++..-++...+.......+.++.|- |+..++++++.. |.. .+|
T Consensus 141 DGrylfiNdkan-~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f 219 (638)
T 3sbq_A 141 DGKYLFINDKAN-SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMY 219 (638)
T ss_dssp EEEEEEEEETTT-TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEE
T ss_pred eeEEEEEecCCC-cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEE
Confidence 678888877665 4788889988887766666667789999987 688888888742 221 111
Q ss_pred Ec-CCCee-eeee---ceeEEEEEEcCCCCEEEEEeCC---------------CeEEEEEc-------------------
Q psy10566 420 DI-EGQVL-DSWE---GVRVNCLWCRSDGKSVLAADTH---------------HRIRTYNF------------------- 460 (604)
Q Consensus 420 d~-~~~~~-~~~~---~~~v~~l~~s~~g~~l~~~~~d---------------g~I~i~d~------------------- 460 (604)
.. ++... ..|. ..........++|++.++.+.+ ..+.++++
T Consensus 220 ~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 220 NAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 10 11000 0010 1112234456777877776643 13445553
Q ss_pred ------CC----C-cccccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCce-----e----eEee-ccccceE
Q psy10566 461 ------EH----L-TDSNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRIL-----L----RKFQ-GVTQGQF 518 (604)
Q Consensus 461 ------~~----~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~-----~----~~~~-~~~~~~~ 518 (604)
+. . .....+........+.++|||+++++++. +.++.++|++.... + .... ...-+..
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 22 0 11112222345567889999999988776 77899999875211 0 0111 1111222
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
.+... +.++|+...+-.-|..|.-|++..
T Consensus 380 PlHt~-Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 380 PLHTT-FDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEE-ECSSSEEEEEETTTTEEEEEEHHH
T ss_pred ccEEE-ECCCCceEeeeeecceEEEEeccH
Confidence 34433 457886666666899999999974
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.17 Score=50.04 Aligned_cols=227 Identities=11% Similarity=0.073 Sum_probs=110.0
Q ss_pred CCCeEEEEeCCCceEEEEEECCC--ceEEEEecCCCCCCe-EEEEEecCCCEEEEEec-C---------CeEEEEEcCCC
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPEDSL-TSCSWNRDGTKFVCGGI-R---------GQFYQCDIEGQ 424 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~--~~~~~~~~~~~~~~v-~~~~~~~~~~~l~s~~~-d---------g~i~iwd~~~~ 424 (604)
++..++.+|.++ ..+++||..+ .+....-........ .+++ .-++..++.|+. + ..+.+||+...
T Consensus 19 ~~~iyv~GG~~~-~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAG-TAWYKLDTQAKDKKWTALAAFPGGPRDQATSA-FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGT-TCEEEEETTSSSCCEEECCCCTTCCCBSCEEE-EETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCC-CeEEEEccccCCCCeeECCCCCCCcCccceEE-EECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 566666666654 3799999874 333222111101111 1222 226777777776 2 36888888655
Q ss_pred eeeeeec----eeEEEEEEcCCCCEEEEEeCC---------------------------------------CeEEEEEcC
Q psy10566 425 VLDSWEG----VRVNCLWCRSDGKSVLAADTH---------------------------------------HRIRTYNFE 461 (604)
Q Consensus 425 ~~~~~~~----~~v~~l~~s~~g~~l~~~~~d---------------------------------------g~I~i~d~~ 461 (604)
....... .+....++..+++.++.|+.+ ..+.+||..
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 4433322 111121222567777888754 578999988
Q ss_pred CCcccccccC--CCCe-eEEEECCCCCEEEEEec------CCeEEEEec--CCCce--eeEeeccccceEEEEeeeCCCC
Q psy10566 462 HLTDSNLLQE--DHPV-MSFTIDATDRLALLNVS------TQGVHLWDL--RDRIL--LRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 462 ~~~~~~~~~~--~~~i-~~~~~s~~~~~l~~~~~------dg~I~lwd~--~~~~~--~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
+.+-...-.. .... .+++.. +++.++.|+. ...+.+||+ .+..- +..+...... ....++. .+
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~~~~~~--~~ 252 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AGGFAGI--SN 252 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BSCEEEE--ET
T ss_pred CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-ccceEEE--EC
Confidence 7543322111 1111 223322 5666666653 345777876 33321 1111111110 0101111 35
Q ss_pred CcEEEEEeCC----------------------CcEEEEeCCCCc--ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCC--
Q psy10566 529 QDFVASGSED----------------------GKVYIWHVKREL--PIATLSGHTRTVSCVAWNPVYHQMIASVSDDC-- 582 (604)
Q Consensus 529 ~~~l~sgs~d----------------------g~I~iwd~~~~~--~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg-- 582 (604)
+++++.|+.+ ..+.+||..+.+ .+..+......-.++.+ + +.+++.||.++
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW--N-NSLLIIGGETAGG 329 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE--T-TEEEEEEEECGGG
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe--C-CEEEEEeeeCCCC
Confidence 6777777632 257889987643 33333332222233333 3 67888888653
Q ss_pred ----cEEEECCCCCC
Q psy10566 583 ----TVRIWGPHLNT 593 (604)
Q Consensus 583 ----~I~iW~~~~~~ 593 (604)
.|.+.++++++
T Consensus 330 ~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 330 KAVTDSVLITVKDNK 344 (357)
T ss_dssp CEEEEEEEEEC-CCS
T ss_pred CEeeeEEEEEEcCcE
Confidence 34555777665
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.70 E-value=1 Score=44.87 Aligned_cols=133 Identities=10% Similarity=0.094 Sum_probs=80.3
Q ss_pred CeEEEEEcCCCcccccccC-----CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc------------eeeEeecccc
Q psy10566 453 HRIRTYNFEHLTDSNLLQE-----DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI------------LLRKFQGVTQ 515 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~------------~~~~~~~~~~ 515 (604)
+.||.-++......+.+.. -..+..+..+|+|+++++.+. ..|.|..+..+. ..+.+.-...
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 5666666654332222222 226788999999999998855 468888887321 1122332111
Q ss_pred c---eEEEEeeeCCC---CCcEEEEEeCCCcEEEEeCCCC--cceEEee---------CCCCCeeEEEEcCCCCcEEEEE
Q psy10566 516 G---QFTIHSCFGGA---NQDFVASGSEDGKVYIWHVKRE--LPIATLS---------GHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 516 ~---~~~i~~~~~~~---~~~~l~sgs~dg~I~iwd~~~~--~~~~~l~---------~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
. ...|..+.|+| ++..|++-..|+.|++||+... ++. .+. .....|.+++|.++ +-.|...
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~-~lTLYvl 197 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKD-GLTLYCL 197 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTT-SSCEEEE
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCC-CcEEEEE
Confidence 0 11233344444 4668999999999999999852 222 332 22357889999986 5555554
Q ss_pred --eCCCcEEEEC
Q psy10566 579 --SDDCTVRIWG 588 (604)
Q Consensus 579 --s~Dg~I~iW~ 588 (604)
+.+|.|+-.-
T Consensus 198 ~~t~~GDIYAlc 209 (452)
T 3pbp_A 198 NTTEGGDIFAFY 209 (452)
T ss_dssp ECTTSCEEEEES
T ss_pred ecCCCCCEEEEC
Confidence 4778776543
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.77 Score=44.91 Aligned_cols=229 Identities=12% Similarity=0.013 Sum_probs=122.6
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE--Eec---CCCCCCeEEEEEecC---CCEEEEE---e
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV--KLN---HSPEDSLTSCSWNRD---GTKFVCG---G 411 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~l~s~---~ 411 (604)
+...-.....|+|.|||..+++--..+ .|++++..++.... .+. .........++|+|+ +..|.+. .
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G--~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEA--TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTC--EEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCC--EEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 333345678999999998766654355 89999876665322 121 123456889999995 3444432 2
Q ss_pred cCCeEEEEEcCC------C---e---eeee---eceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCC
Q psy10566 412 IRGQFYQCDIEG------Q---V---LDSW---EGVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHL 463 (604)
Q Consensus 412 ~dg~i~iwd~~~------~---~---~~~~---~~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~ 463 (604)
.++.|.-|..++ . . +..+ ..|....+.|.|||...++.+. .|.|.-++....
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 345666666643 1 1 1112 1245667999999987776542 356666665432
Q ss_pred c-------cccccc-CCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCc------------------eeeEeeccccc
Q psy10566 464 T-------DSNLLQ-EDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRI------------------LLRKFQGVTQG 516 (604)
Q Consensus 464 ~-------~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~------------------~~~~~~~~~~~ 516 (604)
. ...++. .......++|+|++.+.++-.. ++.=.|--+..+. ++..+..+...
T Consensus 185 ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred ccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 1 011121 1234567899998775554322 2212222222221 11111111111
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc----ceEEeeCCCCCeeEEEEcCCCCcEEEEE
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL----PIATLSGHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~----~~~~l~~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
..-+.+. +|.+++..-..+.|....+..+. ....+.+..+.+.+|+..|| +.++++.
T Consensus 265 --p~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD-G~lyv~t 325 (347)
T 3das_A 265 --PSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG-DKLWLVT 325 (347)
T ss_dssp --EEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET-TEEEEEE
T ss_pred --CcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC-CcEEEEE
Confidence 1111222 45666665556677666665443 22334455578999999999 5555543
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.7 Score=41.63 Aligned_cols=102 Identities=9% Similarity=0.086 Sum_probs=66.0
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ceeE--------EEEEEcCCCCEEEEEeCCCeEEEEEcCC
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GVRV--------NCLWCRSDGKSVLAADTHHRIRTYNFEH 462 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~v--------~~l~~s~~g~~l~~~~~dg~I~i~d~~~ 462 (604)
..+..++|+|+|...++ .+|.++-.+.....-..|- ...| .++.|.++|...++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36789999999987666 7787766665221111111 1233 68899999997777 569998887544
Q ss_pred CcccccccC--------CCCeeEEEECCCCCEEEEEecCCeEEEEe
Q psy10566 463 LTDSNLLQE--------DHPVMSFTIDATDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 463 ~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd 500 (604)
......+.. =..+..+.+.|+|.+.++. |+.++-..
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 222221111 1467899999999988777 77755443
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=1.1 Score=48.65 Aligned_cols=194 Identities=10% Similarity=0.136 Sum_probs=107.0
Q ss_pred CCCCeEEEEECC----CeEEEEEeCCCCceeEeeE-E-----eccCCCCeeEEEECCCCCeEEEEeCCCc----eEEEEE
Q psy10566 311 PDGLKLATGSKD----TTVIIWDVDPVTFTCQHRK-T-----LEGHTLGVAYLAWSPDSSHLLVVGPEDC----HELWVW 376 (604)
Q Consensus 311 pdg~~lasgs~d----g~i~iwd~~~~~~~~~~~~-~-----l~~h~~~V~~l~~spd~~~l~s~~~d~~----~~i~vw 376 (604)
.++..++.||.+ ..+.+||.. +.++..+. . +......-.++.+..++..++.||.++. ..+++|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~--~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIH--YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEEC--SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECC--CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 566777778754 357888887 44454444 2 1111112223333326777777775431 268999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEcCCCeeeeeec------e--eEEEEEEcCC-CCE
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDIEGQVLDSWEG------V--RVNCLWCRSD-GKS 445 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~------~--~v~~l~~s~~-g~~ 445 (604)
|..+......-.......-.+++...+++.++.|+.++ .+.+||........... . ...++.+..+ ++.
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 99987654432211111122333334888888888765 68999987655444332 1 1222444444 667
Q ss_pred EEEEeC--C-----CeEEEEEcCCCcc------ccccc---CCCCeeEEEECCCCCEEEEEec--------CCeEEEEec
Q psy10566 446 VLAADT--H-----HRIRTYNFEHLTD------SNLLQ---EDHPVMSFTIDATDRLALLNVS--------TQGVHLWDL 501 (604)
Q Consensus 446 l~~~~~--d-----g~I~i~d~~~~~~------~~~~~---~~~~i~~~~~s~~~~~l~~~~~--------dg~I~lwd~ 501 (604)
++.|+. + ..+.+||+.+..- ..... ....-.+++...+++.++.|+. ...+.+||+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 777765 2 4689999887661 11111 1111122333333677777764 345889998
Q ss_pred CCCce
Q psy10566 502 RDRIL 506 (604)
Q Consensus 502 ~~~~~ 506 (604)
.+.+-
T Consensus 634 ~t~~W 638 (695)
T 2zwa_A 634 LSETL 638 (695)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87643
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.28 Score=47.80 Aligned_cols=185 Identities=11% Similarity=0.100 Sum_probs=96.6
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEE--CCCCCeEEEE--eCCCceEEEEEECCCceEEEEecC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAW--SPDSSHLLVV--GPEDCHELWVWNIETELLRVKLNH 389 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~--spd~~~l~s~--~~d~~~~i~vwd~~~~~~~~~~~~ 389 (604)
+++.++.||.|.-.|.. +++..-.+... ..++....- .+.+..++.+ +.|| .+..++..+|.....+..
T Consensus 12 ~V~v~t~dG~l~Ald~~----tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG--~l~a~~~~~G~~~~~~~~ 85 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRR----NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDG--NIYYFNAHQGLQKLPLSI 85 (339)
T ss_dssp EEEEEETTSCEEEEETT----TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTT--EEEEEETTTEEEEEEEEH
T ss_pred EEEEEeCCCeEEEEECC----CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCC--EEEEEECCCCcEEeeecc
Confidence 57778888888888877 33334444322 112221110 1122234444 4676 899999988865543331
Q ss_pred C---CCCCeEE---EEE-e----cCCCEEEEEecCCeEEEEEc-CCCeeeeeeceeE---------EEEEEc-----CCC
Q psy10566 390 S---PEDSLTS---CSW-N----RDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVRV---------NCLWCR-----SDG 443 (604)
Q Consensus 390 ~---~~~~v~~---~~~-~----~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~v---------~~l~~s-----~~g 443 (604)
. ...++.. ... . ..+..+++|+.+|.+...|+ +|+.+..+..... .|.... ..+
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~ 165 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE 165 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------C
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCC
Confidence 1 1111211 000 0 14568899999999999998 6888877754311 011110 124
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccccC----CCCee-----EEEECCCCCEEEEEecCCeEEEEecCCCceee
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLLQE----DHPVM-----SFTIDATDRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~~~----~~~i~-----~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
..++.+..+..+.+.+ ++++ ...... ...+. +...+.++.+ ++++.||.|.-+|..+|..+-
T Consensus 166 ~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 166 NMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred CeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 5677777766666665 3332 111100 00000 0001224555 557889999999998887653
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=1.5 Score=47.65 Aligned_cols=194 Identities=9% Similarity=0.106 Sum_probs=105.4
Q ss_pred CCCCeEEEEeCCC--ceEEEEEECCCceEEEEe-c-----CCCCCCeEEEEEec-CCCEEEEEecCC------eEEEEEc
Q psy10566 357 PDSSHLLVVGPED--CHELWVWNIETELLRVKL-N-----HSPEDSLTSCSWNR-DGTKFVCGGIRG------QFYQCDI 421 (604)
Q Consensus 357 pd~~~l~s~~~d~--~~~i~vwd~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~l~s~~~dg------~i~iwd~ 421 (604)
-++..++.||.++ ...+++||..++...... . ......-.+++..+ +++.++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4556666666431 125899999887654433 1 11111123334443 777888887543 5778888
Q ss_pred CCCeeeeeece---eE-EEEEEcCCCCEEEEEeCCC--eEEEEEcCCCccccccc------CCCCeeEEEECCC-CCEEE
Q psy10566 422 EGQVLDSWEGV---RV-NCLWCRSDGKSVLAADTHH--RIRTYNFEHLTDSNLLQ------EDHPVMSFTIDAT-DRLAL 488 (604)
Q Consensus 422 ~~~~~~~~~~~---~v-~~l~~s~~g~~l~~~~~dg--~I~i~d~~~~~~~~~~~------~~~~i~~~~~s~~-~~~l~ 488 (604)
........... +. .+.+...+++.++.|+.++ .+.+||..+..-..... .......+.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 66544433221 11 2233334788888887655 68999988754322211 1222233555555 66777
Q ss_pred EEec--C-----CeEEEEecCCCce-----eeEeecc-ccceEEEEeeeCCCCCcEEEEEeCC--------CcEEEEeCC
Q psy10566 489 LNVS--T-----QGVHLWDLRDRIL-----LRKFQGV-TQGQFTIHSCFGGANQDFVASGSED--------GKVYIWHVK 547 (604)
Q Consensus 489 ~~~~--d-----g~I~lwd~~~~~~-----~~~~~~~-~~~~~~i~~~~~~~~~~~l~sgs~d--------g~I~iwd~~ 547 (604)
.|+. + +.+.+||+.+..- ...+... ........++.. .++.+++.|+.+ ..|.+||..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 7765 2 4589999988761 2222111 111111111221 236777777743 469999998
Q ss_pred CCcc
Q psy10566 548 RELP 551 (604)
Q Consensus 548 ~~~~ 551 (604)
+.+-
T Consensus 635 t~~W 638 (695)
T 2zwa_A 635 SETL 638 (695)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 7643
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=93.65 E-value=7.5 Score=40.16 Aligned_cols=220 Identities=15% Similarity=0.117 Sum_probs=129.0
Q ss_pred CCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC--CCCCeEEEEeCCC-------c----------e
Q psy10566 312 DGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS--PDSSHLLVVGPED-------C----------H 371 (604)
Q Consensus 312 dg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s--pd~~~l~s~~~d~-------~----------~ 371 (604)
||++|+.-. .+..|-.-+++ ..++..+..+. ....+..++|- |+..|+++.+... . +
T Consensus 141 DGrylfiNdkan~RvAri~l~--~~~~d~Ii~iP-n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~ 217 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLD--IMKCDKMITVP-NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYT 217 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETT--TTEEEEEEECT-TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEE
T ss_pred eeEEEEEecCCCcceEEEECC--cEeeceeEeCC-CCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhce
Confidence 678887765 34567777777 44555555555 45678999996 7888998887632 0 0
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---------------eEEEEEcC--------CC----
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---------------QFYQCDIE--------GQ---- 424 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------------~i~iwd~~--------~~---- 424 (604)
.....|.++.+....+.. .+....+...+++++.++.+.+. .+.++++. |+
T Consensus 218 ~f~~iD~~tm~v~~Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~ 295 (638)
T 3sbq_A 218 MYNAIDAETMEMAFQVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITL 295 (638)
T ss_dssp EEEEEETTTCSEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCC
T ss_pred EEEEEcCCccEEEEEEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEE
Confidence 111123333332222221 12344456677888888776432 35555541 11
Q ss_pred ---eeeeeec-----------------eeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCcc-------------ccccc
Q psy10566 425 ---VLDSWEG-----------------VRVNCLWCRSDGKSVLAADT-HHRIRTYNFEHLTD-------------SNLLQ 470 (604)
Q Consensus 425 ---~~~~~~~-----------------~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~-------------~~~~~ 470 (604)
-+..+.+ .....+.++|||+++++++. +.++.++|++.... .....
T Consensus 296 ~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e 375 (638)
T 3sbq_A 296 GDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE 375 (638)
T ss_dssp TTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB
T ss_pred CCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc
Confidence 0111111 12446788999999888765 67899999985211 11122
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC----------ceeeEeeccccceEEEEee--eCCCCCcEEEEEe
Q psy10566 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR----------ILLRKFQGVTQGQFTIHSC--FGGANQDFVASGS 536 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~----------~~~~~~~~~~~~~~~i~~~--~~~~~~~~l~sgs 536 (604)
..-.....+|+++|....+-.-|..|.-|++... ..+.++.-|-+......+. .-.++|++|++..
T Consensus 376 ~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred CCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 3556778999999965666668999999999753 3445555444322221111 2247888888875
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=92.98 E-value=8.9 Score=39.06 Aligned_cols=111 Identities=14% Similarity=0.106 Sum_probs=63.5
Q ss_pred CcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEec---------cCCCCeeEEEECCC----CCeEEEEeC
Q psy10566 302 DEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLE---------GHTLGVAYLAWSPD----SSHLLVVGP 367 (604)
Q Consensus 302 ~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~---------~h~~~V~~l~~spd----~~~l~s~~~ 367 (604)
..-+.|+|.|||. .|+.+...|.|++++.+.. .....+..+. ........|+|+|+ +...++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~-~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGE-IFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSC-BCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCC-eeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 5678999999996 4555678899999974311 1111122221 11457889999996 444444332
Q ss_pred CC----------ceEEEEEECCC----------ceEEEEec-CCCCCCeEEEEEecCCCEEEEEecC
Q psy10566 368 ED----------CHELWVWNIET----------ELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 368 d~----------~~~i~vwd~~~----------~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
.. ...|.-|.+.. .+.+..+. .........++|.|||.+.++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 01455565532 12333332 1222346789999999887776643
|
| >1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1 | Back alignment and structure |
|---|
Probab=92.31 E-value=8.4 Score=37.10 Aligned_cols=190 Identities=8% Similarity=0.023 Sum_probs=106.2
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE---CCC------c
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN---IET------E 381 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd---~~~------~ 381 (604)
|+..++++.+.+|.|+--.+............+... +.+..+........++..+..| .++-+. +.. |
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~G--r~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKG--NYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTS--EEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCC--EEEEEEHHHCcCCCCCCCC
Confidence 566778889999999876654100000001122322 3344444444555666667776 444443 322 2
Q ss_pred eEEEE-ecCCCCCCeEEEEEecC---CCEEEEEecCCeEEEEEcC-------CCeee--ee-eceeEEEEEEcCCCCEEE
Q psy10566 382 LLRVK-LNHSPEDSLTSCSWNRD---GTKFVCGGIRGQFYQCDIE-------GQVLD--SW-EGVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 382 ~~~~~-~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~-------~~~~~--~~-~~~~v~~l~~s~~g~~l~ 447 (604)
..+.. +.......|.++...++ +.+++.++.+|.++-..++ ++-+. .+ .+..+..+........++
T Consensus 80 ~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 80 QHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEE
T ss_pred cChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEE
Confidence 21111 11123345665543332 6689999999999998773 11111 11 223455555555666788
Q ss_pred EEeCCCeEEEEEcCCCcccc---------cccCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSN---------LLQEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~---------~~~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~ 503 (604)
..+.+|.+..+....-.... .+.....|.++...+++. .+++.+..|..+..++..
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 99999999888875432111 122345566665544455 788888899888877654
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=91.91 E-value=11 Score=37.41 Aligned_cols=261 Identities=9% Similarity=0.036 Sum_probs=125.2
Q ss_pred CcEEEEEEcC--CCCeEEEEECCC--eEEEEEeCCCCceeEeeEE---ecc--------CCCCeeEEEECCC--CCeEEE
Q psy10566 302 DEVWFCKFSP--DGLKLATGSKDT--TVIIWDVDPVTFTCQHRKT---LEG--------HTLGVAYLAWSPD--SSHLLV 364 (604)
Q Consensus 302 ~~V~~v~fsp--dg~~lasgs~dg--~i~iwd~~~~~~~~~~~~~---l~~--------h~~~V~~l~~spd--~~~l~s 364 (604)
..|.+|++.| ++.+.|.+ ..| --.||...+...+.+.+.. +.. +...|.++++.|. ...+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 5699999998 55554443 344 1134444433334433221 111 1125778999873 455666
Q ss_pred EeCCCceEEEEEECCCceEEEEecC------------------CCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCe
Q psy10566 365 VGPEDCHELWVWNIETELLRVKLNH------------------SPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQV 425 (604)
Q Consensus 365 ~~~d~~~~i~vwd~~~~~~~~~~~~------------------~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~ 425 (604)
++..+ -|+..+- .++.-..+.. .....+.++.+.| +...++++..++.|...+-.|+.
T Consensus 134 g~~~g--gl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~t 210 (394)
T 3b7f_A 134 GTSPQ--GLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTD 210 (394)
T ss_dssp EEETT--EEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSS
T ss_pred EecCC--cEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCC
Confidence 55554 3544432 2221111110 1123578899988 34556666655655554434443
Q ss_pred eeeee---------------ceeEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCccccccc--CC---CCeeEEEECCC-
Q psy10566 426 LDSWE---------------GVRVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQ--ED---HPVMSFTIDAT- 483 (604)
Q Consensus 426 ~~~~~---------------~~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~---~~i~~~~~s~~- 483 (604)
..... +..+.++.+.+. ...++++...+ |...+-....-..+.. .. ..+.++.++|.
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~ 289 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRD 289 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCCcceECCCCCCCCCccceEEEEECCCC
Confidence 33321 134788899886 45666666544 5444422221111111 11 33567888763
Q ss_pred CCEEEEEec-----------CCeEEEEecCC-CceeeEee-ccccc-eE--EE-EeeeCCC-CCcEEEEEeCCCcEEEEe
Q psy10566 484 DRLALLNVS-----------TQGVHLWDLRD-RILLRKFQ-GVTQG-QF--TI-HSCFGGA-NQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 484 ~~~l~~~~~-----------dg~I~lwd~~~-~~~~~~~~-~~~~~-~~--~i-~~~~~~~-~~~~l~sgs~dg~I~iwd 545 (604)
...++++.. ++...+|...+ ++....+. +.... .+ .+ ..+..+| +...|+.++.++.|+.-
T Consensus 290 ~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S- 368 (394)
T 3b7f_A 290 PRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS- 368 (394)
T ss_dssp TTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-
T ss_pred CCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-
Confidence 344555532 23345555544 33333332 11110 00 00 1122223 33456667666666543
Q ss_pred CCCCcceEEeeCCCCCeeEEEEc
Q psy10566 546 VKRELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 546 ~~~~~~~~~l~~h~~~V~~v~~s 568 (604)
...|+--..+..+-..+.+|+|.
T Consensus 369 ~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 369 ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SSTTSBCEEEECSCSCEEEEEEE
T ss_pred CCCCCCceEcccCCCCeeEEEEe
Confidence 34455555555555567888775
|
| >1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1 | Back alignment and structure |
|---|
Probab=91.27 E-value=11 Score=36.17 Aligned_cols=190 Identities=8% Similarity=0.023 Sum_probs=109.0
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCc-----eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC---Cce
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTF-----TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE---TEL 382 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~-----~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~---~~~ 382 (604)
++..++++.+.+|.|+--.+..... .+.....+... +.+..+........++..+..| .++-+... ...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G--~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEG--KLYLINAYEIKDSS 82 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTS--EEEEEEGGGSCC--
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCC--eEEEEEHHHCCCCC
Confidence 4566788899999999877652110 11111122322 3344544444555677777777 55555442 211
Q ss_pred EEE-------EecCCCCCCeEEEEEec---CCCEEEEEecCCeEEEEEcC--------CCeeeeee-ceeEEEEEEcCCC
Q psy10566 383 LRV-------KLNHSPEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIE--------GQVLDSWE-GVRVNCLWCRSDG 443 (604)
Q Consensus 383 ~~~-------~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~--------~~~~~~~~-~~~v~~l~~s~~g 443 (604)
... .+.......|.++...+ +..+++..+..|.++...+. |.....+. +..+..+....+.
T Consensus 83 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~ 162 (312)
T 1suu_A 83 RASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKD 162 (312)
T ss_dssp -----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTT
T ss_pred ccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCC
Confidence 000 11112234465554443 46788999999999988773 11111121 2345555555556
Q ss_pred CEEEEEeCCCeEEEEEcCCCccc-------cc--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDS-------NL--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~-------~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
..++..+.+|.+..+....-... .. +.....+.++....++..+++.+..|.....++..
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 77999999999999987652211 11 22345666766655667788889999988888754
|
| >3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=89.52 E-value=14 Score=34.66 Aligned_cols=194 Identities=9% Similarity=-0.039 Sum_probs=112.2
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEE---EEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVII---WDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~i---wd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd 377 (604)
+.+..+.......+|+.-+..|.++- |++.. .....+ +. ....|..+.... +..+++.++.+| .++...
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~--~~~~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G--~iKr~~ 96 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQ--GSKVSL--KS-REEKIVGAFIREKFGNRLLLATKKG--YVKKIP 96 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHT--SEECCC--SS-TTCCEEEEEEGGGSCSEEEEEETTS--EEEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCcc--Cccccc--CC-CCCEEEEEECCcCCCCEEEEEeCCC--EEEEEE
Confidence 45666655555556666677887654 44431 111112 43 345566664421 467899999998 788887
Q ss_pred CCCce----EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-----CC-----eeeee-eceeEEEEEEcCC
Q psy10566 378 IETEL----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-----GQ-----VLDSW-EGVRVNCLWCRSD 442 (604)
Q Consensus 378 ~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-----~~-----~~~~~-~~~~v~~l~~s~~ 442 (604)
+..-. -...+.....+.+..+........++..+..|.+..+... ++ ..-.+ .+..+..+...++
T Consensus 97 l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~ 176 (276)
T 3no0_A 97 LAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNG 176 (276)
T ss_dssp GGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESS
T ss_pred HHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCC
Confidence 65421 1112222234566666666667789999999999888762 11 11111 2345666666666
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccc-------cccCCCCeeEEEECCCCCEEEEEecCCeEEE--EecC
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSN-------LLQEDHPVMSFTIDATDRLALLNVSTQGVHL--WDLR 502 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~-------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~l--wd~~ 502 (604)
+..++..+..|.++...+....... .+.....+..+.....+..++..+.+|.+.. ++..
T Consensus 177 ~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 177 EPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp CSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 7789999999999998875432211 1122344444433333445556666666655 6543
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=89.14 E-value=18 Score=35.62 Aligned_cols=181 Identities=8% Similarity=0.016 Sum_probs=89.8
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCC-ce-EEEEEECCCceEEEEecCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPED-CH-ELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~-~~-~i~vwd~~~~~~~~~~~~~ 390 (604)
.|..|+..| +.+++......+....... .....|.+|++.| .+... +++..+ .+ .|...+ ..+..-..+...
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~-~g~~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERML-MAARTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEE-EEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEE-EEecCCCCCccEEEeC-CCCCCceECCcc
Confidence 566676666 5555543211234333211 1245699999998 44444 444332 00 233322 223222222110
Q ss_pred -------------CCCCeEEEEEec-C-CCEEEEEecCCeEEEEEcCCCeeeeee---------------------ceeE
Q psy10566 391 -------------PEDSLTSCSWNR-D-GTKFVCGGIRGQFYQCDIEGQVLDSWE---------------------GVRV 434 (604)
Q Consensus 391 -------------~~~~v~~~~~~~-~-~~~l~s~~~dg~i~iwd~~~~~~~~~~---------------------~~~v 434 (604)
....|.++++.| + ...+.+++..+.|...+-.|+...... ...+
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 112477888887 2 566777776776666544454433321 1257
Q ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEEcCCCccccccc-------------CCCCeeEEEECCC-CCEEEEEecCCeEEEE
Q psy10566 435 NCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQ-------------EDHPVMSFTIDAT-DRLALLNVSTQGVHLW 499 (604)
Q Consensus 435 ~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------------~~~~i~~~~~s~~-~~~l~~~~~dg~I~lw 499 (604)
.++.+.|. ...++++..++.|...+-....-..... ....+.++.++|. ...++++...+ |...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 78999873 4556666555544443322211111100 0134788999986 35666666544 5444
Q ss_pred e
Q psy10566 500 D 500 (604)
Q Consensus 500 d 500 (604)
+
T Consensus 259 ~ 259 (394)
T 3b7f_A 259 D 259 (394)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=89.05 E-value=15 Score=34.48 Aligned_cols=220 Identities=15% Similarity=0.103 Sum_probs=111.1
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCee
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVL 426 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~ 426 (604)
.|..|+.... +.+... ++ .|+.|-......+- ........|..++...... ++. . ||.|+.|-.. ++.-
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G--~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GG--KVLGWGANLNGQLT-MPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TT--EEEEEECCSSSTTS-CCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCC--eEEEEE-CC--EEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCC
Confidence 5667766543 233334 66 78888755421110 0111123566666554332 233 4 8999999763 2211
Q ss_pred ee-eeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 427 DS-WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 427 ~~-~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.. .....|..++...+. .++.. +|.|+.|-....-.. ........|..++...+. .++-. +|.|+.|-....
T Consensus 96 ~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp CCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTT
T ss_pred CCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCC
Confidence 10 001256666665443 34445 899999986553221 111223557777665443 33333 799999976542
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
..+..-......+..|.+ .. ...++. .||.|+.|-....-.+..-......|..|+.... ..++++ ||.|
T Consensus 170 gqlg~p~~~~~~v~~i~~---G~-~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-h~~al~---~g~v 239 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVAG---GI-FHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW-YSLALK---NGKV 239 (282)
T ss_dssp STTSCCGGGGSSEEEEEE---CS-SEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS-CEEEEE---TTEE
T ss_pred CCCCCceecCCCeEEEEe---cC-CEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC-EEEEEE---CCEE
Confidence 221111111122333322 22 223444 5999999976643222111111245778877654 333333 9999
Q ss_pred EEECCCCCC
Q psy10566 585 RIWGPHLNT 593 (604)
Q Consensus 585 ~iW~~~~~~ 593 (604)
..|-.....
T Consensus 240 ~~wG~n~~g 248 (282)
T 3qhy_B 240 IAWGSSRTA 248 (282)
T ss_dssp EEESTTCCC
T ss_pred EEecCCCCc
Confidence 999876543
|
| >3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=87.30 E-value=23 Score=34.67 Aligned_cols=192 Identities=10% Similarity=0.016 Sum_probs=109.9
Q ss_pred EcCCCCeEEEEECCCeEEEEEeCC-----CCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE---ECCC
Q psy10566 309 FSPDGLKLATGSKDTTVIIWDVDP-----VTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW---NIET 380 (604)
Q Consensus 309 fspdg~~lasgs~dg~i~iwd~~~-----~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw---d~~~ 380 (604)
+-|+..++++.+.+|.|+--.+.. ..+.+.....++. .+.+..+........++..+..| .++-+ ++..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G--~~~~~~~~eip~ 79 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSG--KVFWLPVHQLPE 79 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTS--EEEEEEGGGSCB
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCC--eEEEEEHHHCcC
Confidence 346778899999999999765431 0111222233443 44555555555556677667776 44444 4322
Q ss_pred ------ceEEEEe-cCCCCCCeEEEEEec---CCCEEEEEecCCeEEEEEcC--------CCeeeee-eceeEEEEEEcC
Q psy10566 381 ------ELLRVKL-NHSPEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIE--------GQVLDSW-EGVRVNCLWCRS 441 (604)
Q Consensus 381 ------~~~~~~~-~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~--------~~~~~~~-~~~~v~~l~~s~ 441 (604)
|..+..+ .......|.++...+ ++.+++.++..|.++...++ |.....+ .+..+..+....
T Consensus 80 ~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~ 159 (370)
T 3l6v_A 80 AGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTD 159 (370)
T ss_dssp CCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeC
Confidence 2221111 112345566655432 45689999999999988762 1111111 123444455555
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccc---------cccCCCCeeEEEECC------------------------------
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSN---------LLQEDHPVMSFTIDA------------------------------ 482 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~---------~~~~~~~i~~~~~s~------------------------------ 482 (604)
....++..+.+|.+..++...-.... .+.....|.++...+
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~ 239 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVID 239 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC----------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccc
Confidence 66678889999998888865432111 122345566555544
Q ss_pred -----CCCEEEEEecCCeEEEEecCC
Q psy10566 483 -----TDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 483 -----~~~~l~~~~~dg~I~lwd~~~ 503 (604)
++..+++.+..|..+...+..
T Consensus 240 ~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 240 VADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp -------CEEEEEETTSEEEEEEGGG
T ss_pred cccccCCceEEEeeCCCCEEEEEHHH
Confidence 456788999999988887653
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=86.22 E-value=40 Score=36.33 Aligned_cols=232 Identities=8% Similarity=0.009 Sum_probs=117.6
Q ss_pred ECCCCCeEEEEeCCC---ceEEEEEECCCceEEEEecCC-CCC------CeEEEEEecCCCEEEEEe----------cCC
Q psy10566 355 WSPDSSHLLVVGPED---CHELWVWNIETELLRVKLNHS-PED------SLTSCSWNRDGTKFVCGG----------IRG 414 (604)
Q Consensus 355 ~spd~~~l~s~~~d~---~~~i~vwd~~~~~~~~~~~~~-~~~------~v~~~~~~~~~~~l~s~~----------~dg 414 (604)
++|++++++.+-+.+ -..++++|+.+++.+..-... .+. ....++|..+...+++.. ...
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence 789988776653222 248999999999865321110 000 113458874444444321 124
Q ss_pred eEEEEEcCC-----Ceeeeeecee-EEEEEEcCCCCE-----EEEEeCC---CeEEEEEcCC--CcccccccCCCCeeEE
Q psy10566 415 QFYQCDIEG-----QVLDSWEGVR-VNCLWCRSDGKS-----VLAADTH---HRIRTYNFEH--LTDSNLLQEDHPVMSF 478 (604)
Q Consensus 415 ~i~iwd~~~-----~~~~~~~~~~-v~~l~~s~~g~~-----l~~~~~d---g~I~i~d~~~--~~~~~~~~~~~~i~~~ 478 (604)
.|+.|.+-. ..+..-.... ......++++++ +++.+.+ ..+.+.|... .+...+.... .. .+
T Consensus 217 ~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~ 294 (711)
T 4hvt_A 217 SLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS-DA-TL 294 (711)
T ss_dssp EEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT-TC-EE
T ss_pred EEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC-cc-eE
Confidence 688887621 2222211111 234556667662 4443322 3466666553 2211221111 11 12
Q ss_pred EECCCCCEEEEE----------ecCCeEEEEecCCCc-------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc-
Q psy10566 479 TIDATDRLALLN----------VSTQGVHLWDLRDRI-------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK- 540 (604)
Q Consensus 479 ~~s~~~~~l~~~----------~~dg~I~lwd~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~- 540 (604)
..+.++.+++.. ...+.|...|+.++. ..+.+-.+... ..+..+.+.. +.++++...++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~-~~l~~~~~~~~~~ 372 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTAN-EVFNFISTTK-DRVFLATYDNVVA 372 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTT-EEEEEEEECS-SCEEEEEEETTEE
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCC-CeEEEEEEEC-CEEEEEEEECCEE
Confidence 233455544432 245678889987642 22332222222 2343344433 467777777774
Q ss_pred -EEEEeCCCCc-ceEE-eeCC-CCCeeEEEEcCCCCcEEEEEeCC---CcEEEECCC
Q psy10566 541 -VYIWHVKREL-PIAT-LSGH-TRTVSCVAWNPVYHQMIASVSDD---CTVRIWGPH 590 (604)
Q Consensus 541 -I~iwd~~~~~-~~~~-l~~h-~~~V~~v~~sp~~~~~l~s~s~D---g~I~iW~~~ 590 (604)
|+++|..+++ .... +.-. .+.|..+..+++++.++++.+.. +.+..+++.
T Consensus 373 ~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 373 KVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 6777776664 2333 3222 35677777777756677666543 567777775
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=86.21 E-value=40 Score=36.33 Aligned_cols=235 Identities=11% Similarity=0.066 Sum_probs=114.3
Q ss_pred EEEEE-EcCCCCeEEEE-ECCC----eEEEEEeCCCCceeEeeE-Eec-cCCC------CeeEEEECCCCCeEEEEeCC-
Q psy10566 304 VWFCK-FSPDGLKLATG-SKDT----TVIIWDVDPVTFTCQHRK-TLE-GHTL------GVAYLAWSPDSSHLLVVGPE- 368 (604)
Q Consensus 304 V~~v~-fspdg~~lasg-s~dg----~i~iwd~~~~~~~~~~~~-~l~-~h~~------~V~~l~~spd~~~l~s~~~d- 368 (604)
...+. ++|++++++.+ |..| .++++|+. +.+.+. .+. .-.. ....++|..++ .++.+...
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~----t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~ 205 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLE----KKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLH 205 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETT----TTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCS
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECC----cCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCC
Confidence 34455 89999976654 3333 59999998 222221 111 0000 11344786443 44443211
Q ss_pred -------C-ceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCE-----EEEEecC---CeEEEEEcC---CCeee
Q psy10566 369 -------D-CHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTK-----FVCGGIR---GQFYQCDIE---GQVLD 427 (604)
Q Consensus 369 -------~-~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~-----l~s~~~d---g~i~iwd~~---~~~~~ 427 (604)
+ ..+|+.|.+.+.. -...+.......-.+...++++.+ +++.+.+ ..+.+.+.+ +....
T Consensus 206 ~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (711)
T 4hvt_A 206 KNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK 285 (711)
T ss_dssp TTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE
T ss_pred CCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE
Confidence 1 1279999887642 122222222222334555666663 4443322 355666664 33222
Q ss_pred eeeceeEEEEEEcCCCCEEEEE----------eCCCeEEEEEcCCCc-------c-cccccC--CCCeeEEEECCCCCEE
Q psy10566 428 SWEGVRVNCLWCRSDGKSVLAA----------DTHHRIRTYNFEHLT-------D-SNLLQE--DHPVMSFTIDATDRLA 487 (604)
Q Consensus 428 ~~~~~~v~~l~~s~~g~~l~~~----------~~dg~I~i~d~~~~~-------~-~~~~~~--~~~i~~~~~s~~~~~l 487 (604)
...... ..+....++..++.. ...+.|...|+.+.. . ..++.+ ...+..+.+..+ .++
T Consensus 286 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 286 INMPSD-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp CCSCTT-CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred eecCCc-ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 211111 112233344444422 246779999987642 1 112332 445778888865 566
Q ss_pred EEEecCCe--EEEEecCCCc-eeeE-eeccccceEEEEeeeCCCCC-cEEEEEeC---CCcEEEEeCC
Q psy10566 488 LLNVSTQG--VHLWDLRDRI-LLRK-FQGVTQGQFTIHSCFGGANQ-DFVASGSE---DGKVYIWHVK 547 (604)
Q Consensus 488 ~~~~~dg~--I~lwd~~~~~-~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~sgs~---dg~I~iwd~~ 547 (604)
++...++. +.++|+.++. .... +....... +.....++++ .++++.+. -+.++.+|..
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~--~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNA--IFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTC--EEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeE--EEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 66666764 7778876664 2333 22221111 2222223444 45555543 3678888877
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=80.97 E-value=26 Score=39.33 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=28.4
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
+...++..++++-+.|+++|||++.+++++.+..
T Consensus 241 ~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 241 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3344677899999999999999999999888753
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=80.83 E-value=51 Score=33.39 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=60.1
Q ss_pred CeeEEEECCCCC-eEEEEeCCCceEEEEEECCCce---EEEEecC--------CCCCCeEEEEEecC----CCEEEEEec
Q psy10566 349 GVAYLAWSPDSS-HLLVVGPEDCHELWVWNIETEL---LRVKLNH--------SPEDSLTSCSWNRD----GTKFVCGGI 412 (604)
Q Consensus 349 ~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~--------~~~~~v~~~~~~~~----~~~l~s~~~ 412 (604)
....|+|.||+. .++++...+ .|++++..... .+..+.. ........++|+|+ +...++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G--~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEG--YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTT--EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCc--eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 467899999996 455666776 89999754321 1122211 11356789999996 444444332
Q ss_pred C------------CeEEEEEcCC-----------Ceeeeee----ceeEEEEEEcCCCCEEEEEeCC
Q psy10566 413 R------------GQFYQCDIEG-----------QVLDSWE----GVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 413 d------------g~i~iwd~~~-----------~~~~~~~----~~~v~~l~~s~~g~~l~~~~~d 452 (604)
+ ..|.-|.++. +.+.... .|....+.|.|||...++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1444455421 1222221 3567889999999887776543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 604 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-29 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-10 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-09 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-07 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-27 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 5e-26 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 5e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 8e-09 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 7e-23 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 5e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 8e-04 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 0.002 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 1e-22 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 9e-07 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 6e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-22 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 6e-08 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 0.001 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-22 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 7e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-21 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 5e-21 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-17 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-10 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-16 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-16 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-14 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 8e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 0.002 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 6e-14 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-13 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 8e-14 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-04 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-11 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-10 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 6e-11 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-11 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-09 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.002 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 4e-10 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 1e-08 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-07 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 4e-08 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 3e-05 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 1e-07 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 6e-07 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 5e-04 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 116 bits (290), Expect = 2e-29
Identities = 54/317 (17%), Positives = 111/317 (35%), Gaps = 35/317 (11%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L+ H V F P + + S+D T+ +WD + T +TL+GHT V ++
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDSVQDIS 66
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414
+ L + +LW + ++ H + +++S S +G V
Sbjct: 67 FDHSGKLLASCSADMTIKLWDFQGFE---CIRTMHGHDHNVSSVSIMPNGDHIVSASRDK 123
Query: 415 QFYQCDIEG-QVLDSWEGVRVNCLWCR--SDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
+++ + ++ G R R DG + + +R + L+E
Sbjct: 124 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 183
Query: 472 DHPVMSFTIDATDRLALLNVSTQG---------------------VHLWDLRDRILLRKF 510
V+ A + G + +WD+ + L
Sbjct: 184 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 243
Query: 511 QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570
G + + F+ S ++D + +W K + + TL+ H V+ + ++
Sbjct: 244 VGHDNW---VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK- 299
Query: 571 YHQMIASVSDDCTVRIW 587
+ + S D TV++W
Sbjct: 300 TAPYVVTGSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 59.8 bits (143), Expect = 2e-10
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 281 DHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR 340
H+ + E++ K G L +GS+D T+ +WDV T
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS----TGMCL 240
Query: 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCS 399
TL GH V + + +L D L VW+ + ++ H +TS
Sbjct: 241 MTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWDYKNKRCMKTLNAHE--HFVTSLD 296
Query: 400 WNRDGTKFVCGG 411
+++ V G
Sbjct: 297 FHKTAPYVVTGS 308
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 57.1 bits (136), Expect = 2e-09
Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 28/190 (14%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ H + V + + DG +A+ S D TV +W V T + + L H V
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA----TKECKAELREHRHVV 188
Query: 351 AYLAWSPDSSHLLVVGPEDCHELW------------------VWNIET-ELLRVKLNHSP 391
++W+P+SS+ + +W++ T L + H
Sbjct: 189 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD- 247
Query: 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLA 448
+ + ++ G + D + + + + V L V+
Sbjct: 248 -NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 306
Query: 449 ADTHHRIRTY 458
++ +
Sbjct: 307 GSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.5 bits (119), Expect = 2e-07
Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 9/225 (4%)
Query: 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVR- 433
W H +T ++ + V D E G + +G
Sbjct: 3 WIPRPPEKYALSGHR--SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
Query: 434 -VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS 492
V + GK + + I+ ++F+ + +S + +++ S
Sbjct: 61 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 120
Query: 493 TQGVH-LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551
+W+++ ++ F G + + G +AS S D V +W V +
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG---TLIASCSNDQTVRVWVVATKEC 177
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKS 596
A L H V C++W P S + + G S
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 222
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 44.0 bits (102), Expect = 3e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
+ LN H V F + TGS D TV +W+
Sbjct: 283 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 111 bits (277), Expect = 2e-27
Identities = 47/346 (13%), Positives = 100/346 (28%), Gaps = 13/346 (3%)
Query: 246 RLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVW 305
L L +A L+ D +L ++ +D + T + L H +++
Sbjct: 3 ELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPV---GRIQMRTRRTLRGHLAKIY 59
Query: 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV 365
+ D L + S+D +IIWD +T + + V A++P +++
Sbjct: 60 AMHWGTDSRLLVSASQDGKLIIWDS----YTTNKVHAIPLRSSWVMTCAYAPSGNYVACG 115
Query: 366 GPED---CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE 422
G ++ + L + R H+ S + + +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ 175
Query: 423 GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE-DHPVMSFTID 481
+ V L D + ++ + ++ + + +
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235
Query: 482 ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541
S I S + + +G +D
Sbjct: 236 PNGNA-FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 542 YIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+W + L+GH VSC+ +A+ S D ++IW
Sbjct: 295 NVWDALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 63.2 bits (152), Expect = 2e-11
Identities = 41/253 (16%), Positives = 76/253 (30%), Gaps = 42/253 (16%)
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTS 397
+ R+TL GH + + W DS LLV +D + + T + S + +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSS--WVMT 102
Query: 398 CSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRT 457
C++ G CGG+ +++ + + + L +
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 162
Query: 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517
L D Q+ T D
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGD------------------------------------ 186
Query: 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIAS 577
+ S + SG+ D +W V+ + T +GH ++ + + P A+
Sbjct: 187 --VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFAT 243
Query: 578 VSDDCTVRIWGPH 590
SDD T R++
Sbjct: 244 GSDDATCRLFDLR 256
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.1 bits (105), Expect = 1e-05
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
+ VL H + V + DG+ +ATGS D+ + IW+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 107 bits (268), Expect = 5e-26
Identities = 61/325 (18%), Positives = 103/325 (31%), Gaps = 37/325 (11%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF--------------TCQHRKTLE 344
DH V KFS DG LATG + T ++ V + + +
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG 404
L + + +SPD L + +W ++ ++ + SL
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 405 TKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464
+ + + S E DGK + A +R ++ E
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 465 DSNLLQEDH--------PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516
L ++ V S + + + V LW+L++ + G
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 517 QF---------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567
+ S N +++ SGS+D V W K P+ L GH +V VA
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 358
Query: 568 NPV-----YHQMIASVSDDCTVRIW 587
+ + A+ S DC RIW
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIW 383
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 68.7 bits (166), Expect = 5e-13
Identities = 54/297 (18%), Positives = 94/297 (31%), Gaps = 19/297 (6%)
Query: 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV 330
V+ L D ++ T + FSPDG LATG++D + IWD+
Sbjct: 91 SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDI 150
Query: 331 D---PVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKL 387
+ V H + + + S V + + E +
Sbjct: 151 ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTV 210
Query: 388 NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVL 447
SP D + + D V G + + V + DG+SV+
Sbjct: 211 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270
Query: 448 AADTHHRIRTYNFEHLTDSNL-------------LQEDHPVMSFTIDATDRLALLNVSTQ 494
+ ++ +N ++ + + + V+S D L +
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330
Query: 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA---NQDFVASGSEDGKVYIWHVKR 548
GV WD + L QG ++ G + + A+GS D K IW K+
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.6 bits (132), Expect = 8e-09
Identities = 25/227 (11%), Positives = 59/227 (25%), Gaps = 21/227 (9%)
Query: 258 QKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLA 317
+ + + + + + L+ DG +A
Sbjct: 162 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 221
Query: 318 TGSKDTTVIIWDVDPVTFTCQ---HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374
GS D V +WD + + ++ GH V + ++ D ++ + +LW
Sbjct: 222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 375 ---------VWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQ 424
+D + S + ++ + G D + G
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 425 VLDSWEG--------VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL 463
L +G N + + R + ++ +
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.0 bits (242), Expect = 7e-23
Identities = 56/298 (18%), Positives = 98/298 (32%), Gaps = 17/298 (5%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349
++ +VL H D V C G ++ +GS D T+ +W T + +TL GHT G
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAV----TGKCLRTLVGHTGG 59
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409
V + + + E S C +
Sbjct: 60 VWSSQMRDNIII------SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113
Query: 410 GGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL 469
GQ L G + DG+ V++ ++ ++ E T + L
Sbjct: 114 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 173
Query: 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
Q H +++ + + +WD+ + G +
Sbjct: 174 Q-GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-----KD 227
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + SG+ D V IW +K + TL G + S V + + SDD TV++W
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (116), Expect = 5e-07
Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 4/100 (4%)
Query: 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558
W + + +G + +C + + SGS+D + +W + TL GH
Sbjct: 1 WRRGELKSPKVLKGHDDH---VITCLQ-FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH 56
Query: 559 TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
T V ++ H
Sbjct: 57 TGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 96
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 8e-04
Identities = 15/99 (15%), Positives = 27/99 (27%), Gaps = 7/99 (7%)
Query: 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQH---RKTLEG 345
+ + + + + T S D TV +WD+ T G
Sbjct: 246 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK--TGEFIRNLVTLESGG 303
Query: 346 HTLGVAYLAWSPDSSHLLVVGPEDCHE--LWVWNIETEL 382
V + S V E L V + + ++
Sbjct: 304 SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 342
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (88), Expect = 0.002
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 258 QKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLA 317
++ V S ++ ++ + L T E T VW + S L A
Sbjct: 262 AVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 321
Query: 318 TGSKDTT----VIIWDVD 331
GS++ T +++ D D
Sbjct: 322 VGSRNGTEETKLLVLDFD 339
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 96.6 bits (238), Expect = 1e-22
Identities = 38/297 (12%), Positives = 77/297 (25%), Gaps = 17/297 (5%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
E + ++ H + +P L +GS D ++ W + H+ +
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS---------SMHQDHSNLIV 50
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
L S + + + + E + + + + + D
Sbjct: 51 SLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
S V + V + +
Sbjct: 111 GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 170
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
+L Q + R K ++ + +D
Sbjct: 171 SPSETYIAAGDVMG-KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL 229
Query: 532 VASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
VA+GS D ++I+ VKR I L+ H V+ + W + S D ++ W
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRW 284
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.8 bits (114), Expect = 9e-07
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 281 DHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR 340
+ ++ F ++ E + + +ATGS DT + I+ V +
Sbjct: 195 EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR---PMKII 251
Query: 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
K L H GV L W S+ LV D + WN+
Sbjct: 252 KALNAHKDGVNNLLWETPST--LVSSGADAC-IKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.1 bits (107), Expect = 6e-06
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 551 PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
+ T+SGH + ++ + NP + S S D + W ++ H
Sbjct: 5 VLKTISGHNKGITALTVNP-----LISGSYDGRIMEW--SSSSMHQDH 45
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.8 bits (239), Expect = 1e-22
Identities = 32/292 (10%), Positives = 76/292 (26%), Gaps = 10/292 (3%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV-DPVTFTCQHRKTLEGHTLGVAYLAWSP 357
+H + V S + TG V +WD+ P + + + P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 358 DSSHLLVVGP--EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415
D L+V G + + +L ++ G
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 416 FYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPV 475
+ + +C+ +DG + + +R+++ +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 476 MSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535
S T + + + V + + + + + S + S
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KYQLHLHESCVLSLKFAYCGKWFVST 283
Query: 536 SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+D + W I + +V + + I + S D ++
Sbjct: 284 GKDNLLNAWRTPYGASIFQS-KESSSVLSCDISV-DDKYIVTGSGDKKATVY 333
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.5 bits (124), Expect = 6e-08
Identities = 16/95 (16%), Positives = 25/95 (26%), Gaps = 7/95 (7%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL 343
L+ H V KF+ G + KD + W
Sbjct: 248 VEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP----YGASIFQS 303
Query: 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
+ V S D + +V G D V+ +
Sbjct: 304 -KESSSVLSCDISVDDKY-IVTGSGDKK-ATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 0.001
Identities = 17/88 (19%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Query: 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569
FQG + Q D + + I TL H V V +
Sbjct: 3 FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISN 61
Query: 570 VYHQMIASVSDDCTVRIWGPHLNTNKSP 597
+ + + V++W NKSP
Sbjct: 62 -PTRHVYTGGKG-CVKVWDISHPGNKSP 87
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 96.8 bits (239), Expect = 2e-22
Identities = 32/324 (9%), Positives = 81/324 (25%), Gaps = 28/324 (8%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
Q+ D + K P L S D ++ ++ D ++L + +
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCN 63
Query: 355 WSPDSSHLLVVGPEDCHEL--------WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTK 406
+ ++ + VG L + + + +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123
Query: 407 FVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS 466
R + + V+ ++ ++ + +++ + D
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183
Query: 467 NLLQEDHP-----------------VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509
N E+ +ID + + + R
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243
Query: 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569
T + ++S F+ + DG + W+++ I + S V
Sbjct: 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIAC 302
Query: 570 VYHQMIASVSDDCTVRIWGPHLNT 593
++ + D T + T
Sbjct: 303 -SDNILCLATSDDTFKTNAAIDQT 325
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 3e-05
Identities = 14/121 (11%), Positives = 30/121 (24%), Gaps = 5/121 (4%)
Query: 260 YHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATG 319
E ++ + + V +FSP L T
Sbjct: 210 ACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269
Query: 320 SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379
D + W++ T + K + + + L + +D + +
Sbjct: 270 GSDGIISCWNLQ----TRKKIKNFAKFNEDSV-VKIACSDNILCLATSDDTFKTNAAIDQ 324
Query: 380 T 380
T
Sbjct: 325 T 325
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.9 bits (99), Expect = 7e-05
Identities = 6/50 (12%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLAS 601
+ +S + P ++ S D ++ ++ + L S
Sbjct: 4 VQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQS 52
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 92.4 bits (227), Expect = 3e-21
Identities = 37/296 (12%), Positives = 84/296 (28%), Gaps = 9/296 (3%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
QV H + S DG L + + + WD+ T R + H + +
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS--TGISN-RVFPDVHATMITGIK 62
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414
+ V + + + + N + + DG V +
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK-LSSQPLGLAVSADGDIAVAACYKH 121
Query: 415 QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHP 474
+ + L +V D+ + + +++ +
Sbjct: 122 IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE 181
Query: 475 VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534
+ S + ++ V + + + L T + + +A+
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 535 GSEDGKVYIWHVKRELPIATL---SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
GS D V +W++ + + + +V+ V W I S D ++ W
Sbjct: 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSNIKFW 295
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.9 bits (96), Expect = 1e-04
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL 343
F T H +V +SPD ++LATGS D +VI+W+++ +
Sbjct: 207 SVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN--KPSDHPIIIK 264
Query: 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
H + + + ++ G +D + + WN+
Sbjct: 265 GAHAMSSVNSVIWLNETTIVSAG-QDSN-IKFWNV 297
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.4 bits (225), Expect = 5e-21
Identities = 62/305 (20%), Positives = 106/305 (34%), Gaps = 27/305 (8%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ ++ V+ C D K+ +G +D T+ IWD + T + ++ L GHT V
Sbjct: 6 QRIHCRSETSKGVY-C-LQYDDQKIVSGLRDNTIKIWDKN----TLECKRILTGHTGSVL 59
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
L + +++ G D E+L ++H + T
Sbjct: 60 CLQYDE---RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS 116
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
I + + G R D K +++A I+ +N L
Sbjct: 117 IAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN- 175
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
H + DRL + S + LWD+ LR +G + I
Sbjct: 176 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN-----KR 230
Query: 532 VASGSEDGKVYIWHVKR---------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582
+ SG+ DGK+ +W + L + TL H+ V + ++ I S S D
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDD 287
Query: 583 TVRIW 587
T+ IW
Sbjct: 288 TILIW 292
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 81.1 bits (198), Expect = 4e-17
Identities = 41/358 (11%), Positives = 76/358 (21%), Gaps = 77/358 (21%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
+ + ++ D ++A + V I++ L+ H V + W+PDS
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--GNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419
+ ++ G + +W T + + W + KF G C
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLV-ILRINRAARCVRWAPNEKKFAVGSGSRVISIC 122
Query: 420 DIEGQ----------------VLDSWEGVRVNCLWCRSDGKSVLAADT----------HH 453
E + VL L S
Sbjct: 123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT 182
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
+ V A V L D ++ +
Sbjct: 183 PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 242
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---------------- 557
T + VA+G D ++ + G
Sbjct: 243 TLPLLAVTFITES---SLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTAR 298
Query: 558 -------------------------HTRTVSCVAWNPVYH---QMIASVSDDCTVRIW 587
H +VS ++ + D + IW
Sbjct: 299 ERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.5 bits (142), Expect = 4e-10
Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 528 NQDFVASGSEDGKVYIWHV--KRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
++ +A + +V+I+ + + + L H V+ V W P I + D
Sbjct: 18 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAY 76
Query: 586 IWGPHLNTNKSPH 598
+W T K
Sbjct: 77 VWTLKGRTWKPTL 89
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 78.4 bits (191), Expect = 2e-16
Identities = 39/295 (13%), Positives = 76/295 (25%), Gaps = 23/295 (7%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
+P G K+ + T+V V + + H+ SP + G
Sbjct: 25 NTPAGDKIQYCN-GTSVYTVPVG----SLTDTEIYTEHSHQTTVAKTSPSG-YYCASGDV 78
Query: 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS 428
+ +T + + SW+ + + G + + S
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138
Query: 429 WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH-------PVMSFTID 481
+ S N + + + V S +
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN 198
Query: 482 ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA----NQDFVASGSE 537
L + L++ D F+ + G + +AS S
Sbjct: 199 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 258
Query: 538 DGKVYIWHVKRELPIATLSGHTR---TVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
D + IW+V T+ TR + W Q + S+S + + P
Sbjct: 259 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK---QALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.8 bits (109), Expect = 4e-06
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-L 348
+ + H V+ +SPDG K+A+ S D T+ IW+V T + KT+ T +
Sbjct: 227 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA----TLKVEKTIPVGTRI 282
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379
L L+ + + N E
Sbjct: 283 EDQQLGIIWTKQALVSIS--ANGFINFVNPE 311
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.9 bits (104), Expect = 2e-05
Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
D + + VY V + H+ + +P AS VRIW
Sbjct: 30 DKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDT 87
Query: 590 HLNTNKSPH 598
T+
Sbjct: 88 TQTTHILKT 96
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.0 bits (94), Expect = 2e-04
Identities = 22/248 (8%), Positives = 50/248 (20%), Gaps = 18/248 (7%)
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
L +P + ++ + + + HS T + G G
Sbjct: 23 LGNTPAGDKIQYCNGTS---VYTVPVGSLTDTEIYTEHS--HQTTVAKTSPSGYYCASGD 77
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
+ G D + V + +
Sbjct: 78 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT 137
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
+ ++ A + + + + + + + + +
Sbjct: 138 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRY 197
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH------------QMIASVS 579
GS + N + IAS S
Sbjct: 198 NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 257
Query: 580 DDCTVRIW 587
D T++IW
Sbjct: 258 ADKTIKIW 265
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 78.4 bits (191), Expect = 2e-16
Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 22/300 (7%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGP 367
+ P +A + + +D GH + V + +SP +
Sbjct: 25 YDPTTNAIAYPCGK-SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG 83
Query: 368 EDCHELWVWNIETELLRVKLNHSP-------EDSLTSCSWNRDGTKFVCGG------IRG 414
++ ++ VW + + + ++ SW+ +G + G
Sbjct: 84 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 143
Query: 415 QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHP 474
+ + C +S + + Y S + H
Sbjct: 144 ISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK 203
Query: 475 VMSFTIDAT-----DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
SF D + S + + +D + L+ + + +
Sbjct: 204 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDS 263
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH--QMIASVSDDCTVRIW 587
A+ D + +W V + + + + V I S+S D T+ +
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.1 bits (172), Expect = 5e-14
Identities = 27/272 (9%), Positives = 64/272 (23%), Gaps = 17/272 (6%)
Query: 292 ETTQVLNDHCDEVWFCKFSP--DGLKLATGSKDTTVIIWDVD----PVTFTCQHRKTLEG 345
Q V KFSP L +G + VI+W + + +
Sbjct: 54 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQV 113
Query: 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT 405
++ ++W + L VVG + + ++ +++ +
Sbjct: 114 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM 173
Query: 406 KFVCGGIRGQFYQCDIEGQVL-----------DSWEGVRVNCLWCRSDGKSVLAADTHHR 454
+ + G G V +
Sbjct: 174 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF 233
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514
+ + + + + + +WD+ ++K+
Sbjct: 234 DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK 293
Query: 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546
Q + S S DG + + +
Sbjct: 294 QQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.8 bits (114), Expect = 8e-07
Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 3/97 (3%)
Query: 282 HLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK 341
K + + + F D K AT D T+ +WDV T C +
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT--TSKCVQKW 289
Query: 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
TL+ LG + + ++ D L + +
Sbjct: 290 TLDKQQLGNQQVGVVATGNGRIISLSLDGT-LNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.4 bits (87), Expect = 0.002
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV--KRELPIATLSGH-TRTVSCVAWNPV 570
TQ FT H + + V + P+ +GH + V+ V ++P+
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 571 Y-HQMIASVSDDCTVRIWGPH 590
Q + S + V +WG
Sbjct: 75 KGSQYLCSGDESGKVIVWGWT 95
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 71.4 bits (173), Expect = 6e-14
Identities = 26/309 (8%), Positives = 71/309 (22%), Gaps = 29/309 (9%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
+ + + D + D T + E + V + +
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF---EENLGNVFAMGVDRNG 97
Query: 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN-------RDGTKFVCGGI 412
+V + + + T + G +
Sbjct: 98 KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 157
Query: 413 RGQFYQCDIEGQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
+ D+EG+ + + +D K++ + + L S +
Sbjct: 158 MQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 217
Query: 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI------------LLRKFQGVTQGQF 518
V+ + + L+ S + + R +
Sbjct: 218 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL 277
Query: 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578
G + E G + + VK ++ ++ + + + +
Sbjct: 278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSA-DRKTVMVR 332
Query: 579 SDDCTVRIW 587
DD + +
Sbjct: 333 KDDGKIYTF 341
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 70.7 bits (171), Expect = 1e-13
Identities = 29/302 (9%), Positives = 56/302 (18%), Gaps = 31/302 (10%)
Query: 309 FSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367
FSP DG +A S+ I DV L + Y+ D+ + G
Sbjct: 10 FSPLDGDLIAFVSRGQ-AFIQDVS------GTYVLKVPEPLRIRYVRRGGDTKVAFIHGT 62
Query: 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427
+ L +++ T + N + +
Sbjct: 63 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI 122
Query: 428 -----------SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVM 476
+ + I Y+ E E+
Sbjct: 123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDY 182
Query: 477 SFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-----------GVTQGQFTIHSCFG 525
+ DA + D + + S
Sbjct: 183 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
A + + + I L S + +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA-AYYQGAPEKGVLL 301
Query: 586 IW 587
+
Sbjct: 302 KY 303
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 41.4 bits (95), Expect = 2e-04
Identities = 4/38 (10%), Positives = 15/38 (39%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
T+ + + + + + S D + D + + ++
Sbjct: 307 TRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLE 344
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.7 bits (171), Expect = 8e-14
Identities = 40/358 (11%), Positives = 81/358 (22%), Gaps = 70/358 (19%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349
P TT L H V C + + TG+ D + ++D + L GH G
Sbjct: 3 PQRTT--LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGG 55
Query: 350 VAYLAWSPDSSHLLVVGPEDCHE------------------------------------- 372
V L + L+ +
Sbjct: 56 VWALKY-AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 114
Query: 373 -----LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427
L VW + E + L + + + +
Sbjct: 115 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 174
Query: 428 SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA 487
+ L + H R Y+ + + + I +
Sbjct: 175 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 234
Query: 488 LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ-----------------D 530
L+ L L G + + D
Sbjct: 235 LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD 294
Query: 531 FVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + + I++++ +L A + + V + ++A+V D +
Sbjct: 295 NILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 350
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.4 bits (113), Expect = 1e-06
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 528 NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
++V +G++D + ++ + + LSGH V + + ++ S S D TVR+W
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--GGILVSGSTDRTVRVW 79
Query: 588 GPH 590
Sbjct: 80 DIK 82
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.2 bits (97), Expect = 1e-04
Identities = 14/121 (11%), Positives = 33/121 (27%), Gaps = 7/121 (5%)
Query: 258 QKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLA 317
+ H VS D + + + H + F L
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV 298
Query: 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE-LWVW 376
+GS + I+++ + H + + + + L+ +D L +
Sbjct: 299 SGS-ENQFNIYNLR--SGKLVH-ANILKDADQIWSVNFKGK--TLVAAVEKDGQSFLEIL 352
Query: 377 N 377
+
Sbjct: 353 D 353
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 62.4 bits (150), Expect = 4e-11
Identities = 27/324 (8%), Positives = 66/324 (20%), Gaps = 54/324 (16%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
+ + + + DV + T + G +PD+ V+
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVA--SDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 369 DCHELWVWNIETELLRVKLNHSPEDSLTS-----CSWNRDGTKFVCGG------------ 411
+++ +++T N S + + DG +
Sbjct: 61 Y-GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 119
Query: 412 -------IRGQFYQCDIEGQVLDSWEGVRV---------------NCLWCRSDGKSVLAA 449
+ V + GK +A
Sbjct: 120 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVAL 179
Query: 450 DTHHRIRTYNFEHLTDSNLLQED------HPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503
+ R + + G DL+
Sbjct: 180 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 239
Query: 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS 563
+ + G ++ + +K+ I + T
Sbjct: 240 GKTHTQEF--ADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYY 295
Query: 564 CVAWNPVYHQMIASVSDDCTVRIW 587
CVA++ + + ++
Sbjct: 296 CVAFDKK-GDKLYLGGTFNDLAVF 318
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 60.1 bits (144), Expect = 2e-10
Identities = 31/303 (10%), Positives = 65/303 (21%), Gaps = 50/303 (16%)
Query: 299 DHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDP--VTFTCQHRKTLEGHTLGVAYLAW 355
+PD + + D+D TF + A
Sbjct: 37 PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96
Query: 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT-SCSWNRDGTKFVCGGIRG 414
SPD + + ++ L V ++ + G
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156
Query: 415 QFYQCDIEGQVLDSWEGVRVNCLWCRS--------------------------------- 441
Y + +D G L R+
Sbjct: 157 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 216
Query: 442 --DGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHL 498
D + AD + + + + D + FT + +
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAK 276
Query: 499 WDLRDRILLRKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL 555
+DL+ R L++ F D + G + +++ + +
Sbjct: 277 YDLKQRKLIKAANLDHTYYCVAFD-------KKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Query: 556 SGH 558
Sbjct: 330 KLP 332
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 39.7 bits (91), Expect = 8e-04
Identities = 9/53 (16%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ + F G KL G + +++ D T L G +
Sbjct: 289 NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD--TLEKVKNIKLPGGDMSTT 339
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.2 bits (149), Expect = 6e-11
Identities = 38/357 (10%), Positives = 84/357 (23%), Gaps = 65/357 (18%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP--VTFTCQHRKTLEGHTLGV 350
T H +++ + S D + +WD + H G+
Sbjct: 6 TANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 351 AYLAWSPDSS------HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT-------- 396
++ L+ +L + I E K+ D L
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFS-GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF 122
Query: 397 -SCSWNRDG-----TKFVCGGIRGQFYQCDIEGQVLDSWE-------------------- 430
+ W + V ++G Y +S
Sbjct: 123 WALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT 182
Query: 431 -GVRVNCLWCRSDGKSVLAAD------THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT 483
+ G + + + + +++ + + S
Sbjct: 183 PSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242
Query: 484 DRLALLNVSTQGVHLWDLRD-------------RILLRKFQGVTQGQFTIHSCFGGANQD 530
L + + L + + G + S + +
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302
Query: 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ S DGK+ W VK + I TL+ H + + S+++ +
Sbjct: 303 TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVK 359
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 9/59 (15%)
Query: 540 KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
KV+I H + V+ S S D +++W L N++P
Sbjct: 1 KVFIATA------NAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPK 50
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 61.4 bits (147), Expect = 8e-11
Identities = 24/312 (7%), Positives = 62/312 (19%), Gaps = 49/312 (15%)
Query: 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375
+ ++ +++ D + T+ +P + L
Sbjct: 4 ILAPARPDKLVVIDTE--KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-ESLVK 60
Query: 376 WNIET----ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ------- 424
++ T + + SL + + DG + E Q
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 425 -------VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMS 477
++ L DG + + L + +Q
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180
Query: 478 FTIDAT----------------------DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ 515
D A G+ DL +
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET----GEMAMREV 236
Query: 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575
+ N + + + +++ I + + V + +
Sbjct: 237 RIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVST-DGSTV 294
Query: 576 ASVSDDCTVRIW 587
+ +
Sbjct: 295 WLGGALGDLAAY 306
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 55.6 bits (132), Expect = 6e-09
Identities = 37/312 (11%), Positives = 76/312 (24%), Gaps = 44/312 (14%)
Query: 297 LNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY-LA 354
+ D +P G AT +K +++ D+ + + + + A
Sbjct: 29 IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88
Query: 355 WSPDSSHLLVVGPEDCHELWV--------WNIETELLRVKLNHSPEDSLTSCSWNRDGTK 406
SPD L + EL + E L + +T +W RDG+K
Sbjct: 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK 148
Query: 407 FVCGGIRGQFYQCDIEGQV------------------------LDSWEGVRVNCLWCRSD 442
G + V +S + R D
Sbjct: 149 LYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKD 208
Query: 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502
+ T + E + V F+ + + +DL
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLE 268
Query: 503 DRILLRKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT 559
+++ + + V G G + + + +
Sbjct: 269 KNASIKRVPLPHSYYSVNVS-------TDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321
Query: 560 RTVSCVAWNPVY 571
+A ++
Sbjct: 322 NASMSLASVRLF 333
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.6 bits (93), Expect = 4e-04
Identities = 7/60 (11%), Positives = 16/60 (26%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD 358
+ S DG + G + +D + + Q + ++ D
Sbjct: 277 PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.6 bits (88), Expect = 0.002
Identities = 6/61 (9%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATL--SGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586
+D++ + + K+ + ++ + + T P A+V+ ++
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 587 W 587
Sbjct: 61 I 61
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 59.1 bits (141), Expect = 4e-10
Identities = 25/290 (8%), Positives = 73/290 (25%), Gaps = 16/290 (5%)
Query: 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377
S+ + + DV + + T+ + SPD + + V +++ + +
Sbjct: 7 ANSESDNISVIDVT----SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHS-NDVSIID 60
Query: 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVR-VNC 436
T + + + S + V + + +
Sbjct: 61 TATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLG 120
Query: 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGV 496
L DGK + + + + D + + +
Sbjct: 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180
Query: 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL-PIATL 555
+ + + + + + +V + + A +
Sbjct: 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240
Query: 556 SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP-------HLNTNKSPH 598
+ +A P ++ ++S TV + + K+P+
Sbjct: 241 PVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPY 289
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 54.8 bits (130), Expect = 1e-08
Identities = 32/327 (9%), Positives = 74/327 (22%), Gaps = 55/327 (16%)
Query: 309 FSPDGLKL-----ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL 363
+PD ++ A + T + D + + ++G + + D S +
Sbjct: 9 PAPDARRVYVNDPAHFAAVTQQFVIDGE----AGRVIGMIDGGF--LPNPVVADDGSFIA 62
Query: 364 VVGPEDCH--------ELWVWNIETELLRVKLNHSPEDSLTS------------------ 397
+ V++ T L +
Sbjct: 63 HASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLF 122
Query: 398 CSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH-RIR 456
++ V F + + DG A
Sbjct: 123 YQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE 182
Query: 457 TYNFEHLTDSNLLQEDHPVMS------FTIDATDRLALLNVSTQGVHLWDLRD------- 503
+ E + +HP S T ++ +++S+ +
Sbjct: 183 ITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 242
Query: 504 --RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561
+Q V + +D + V + K +A
Sbjct: 243 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HE 301
Query: 562 VSCVAWNPV-YHQMIASVSDDCTVRIW 587
+ + + + A + D T+ I
Sbjct: 302 IDSINVSQDEKPLLYALSTGDKTLYIH 328
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 50.2 bits (118), Expect = 3e-07
Identities = 35/305 (11%), Positives = 72/305 (23%), Gaps = 49/305 (16%)
Query: 309 FSPDGLKLAT----------GSKDTTVIIWDVDPVTFTC---QHRKTLEGHTLGVAYLAW 355
+ DG +A G + V ++D + T +
Sbjct: 54 VADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 113
Query: 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH------SPEDSLTSCSWNRDGTKFVC 409
+PD LL + V ++E + + L+ P T RDG+
Sbjct: 114 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKV 173
Query: 410 GGIRGQFYQC--------------------DIEGQVLDSWEGVRVNCLWCRSDGKSVLAA 449
+ G+++ +++ + S L A
Sbjct: 174 AFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233
Query: 450 DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG--VHLWDLRDRILL 507
H + D+ T V + D + L
Sbjct: 234 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 293
Query: 508 RKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSC 564
KF + + A + D +YI + + +++
Sbjct: 294 AKFEMGHEIDSINVS-----QDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQV 348
Query: 565 VAWNP 569
+
Sbjct: 349 ITTAD 353
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 53.3 bits (127), Expect = 4e-08
Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 28/304 (9%)
Query: 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSPDSS 360
V + S G L +D V + D+ T K +
Sbjct: 62 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDK 121
Query: 361 HLLVVGPEDCHELWVWNIET-ELLRVKLNH---------SPEDSLTSCSWNRDGTKFVC- 409
+ + + + ET E +++ PE + + + +F+
Sbjct: 122 YAIAGAYWPPQ-YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 180
Query: 410 ----GGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLT 464
G I Y + + ++ + + A +++ + +
Sbjct: 181 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 240
Query: 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
+ A H+ D ++ +G + I F
Sbjct: 241 LVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 300
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH-QMIASVSDDCT 583
+ + Y++ ATL+ VA V+ + + D
Sbjct: 301 PALGGGSLFIKTHPNSQYLYVD------ATLNPEAEISGSVA---VFDIKAMTGDGSDPE 351
Query: 584 VRIW 587
+
Sbjct: 352 FKTL 355
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 44.4 bits (104), Expect = 3e-05
Identities = 39/294 (13%), Positives = 83/294 (28%), Gaps = 40/294 (13%)
Query: 310 SPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369
+ L T + + D T+ + L+ V S +L V+G +
Sbjct: 29 DLENLFSVTLRDAGQIALIDGS--TYEIK--TVLDTGY-AVHISRLSASGRYLFVIGRDG 83
Query: 370 CHELWVWNIE--TELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVL 426
+ ++ T + +K+ TS + Q+ D
Sbjct: 84 KVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD-----G 138
Query: 427 DSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRL 486
++ E ++ + G + + H R + L P + T +
Sbjct: 139 ETLEPKKIQ----STRGMTYDEQEYHPEPRVA-------AILASHYRPEFIVNVKETGK- 186
Query: 487 ALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546
+ L D D L+ + +F G+++ F+ + + K+ +
Sbjct: 187 ---------ILLVDYTDLNNLKTTEISA-ERFLHDGGLDGSHRYFITAANARNKLVVIDT 236
Query: 547 KRELPIATLSGHTRTVSCVAWNPVYH-----QMIASVSDDCTVRIWGPHLNTNK 595
K +A +T H S D +V + G +
Sbjct: 237 KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHP 290
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 51.9 bits (123), Expect = 1e-07
Identities = 27/293 (9%), Positives = 63/293 (21%), Gaps = 24/293 (8%)
Query: 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSPDSS 360
V + S G L +D + + D+ T K + +
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDR 121
Query: 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420
+ + + + ET + ++ D +
Sbjct: 122 YTIAGAYWPPQ-FAIMDGETLEPKQIVSTRGM--------TVDTQTYHPEPRVAAIIASH 172
Query: 421 IEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTI 480
+ + + + L D ++ + + +
Sbjct: 173 EHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVA 232
Query: 481 DATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540
+ + V R F G S G + + + ++
Sbjct: 233 VIDSK-DRRLSALVDVGKTPHPGRGA--NFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP 289
Query: 541 VYIWHVKRELPIATLSGHTRTVSCVAWNP------VYHQMIASVSDDCTVRIW 587
Y W EL G + +P V +V ++
Sbjct: 290 QYAWKKVAELQ-----GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 337
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 49.4 bits (116), Expect = 6e-07
Identities = 26/305 (8%), Positives = 72/305 (23%), Gaps = 29/305 (9%)
Query: 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH-ELWVW 376
+ + +W+++ + V + SPD +L V + +
Sbjct: 9 ASPESQQIHVWNLN--HEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66
Query: 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG------IRGQFYQCDIEGQVLDSWE 430
+ L + SLT S + G G + G V
Sbjct: 67 APDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 126
Query: 431 GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN 490
+ D +++ + Q+ V + +
Sbjct: 127 LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP 186
Query: 491 VSTQGVHLWDLRDRILLRKFQ-----------------GVTQGQFTIHSCFGGANQDFVA 533
+ +L + + + + + ++ + A
Sbjct: 187 NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 246
Query: 534 SGSEDGKVYIWHVKRELPIATLSGHTRTVSC---VAWNPVYHQMIASVSDDCTVRIWGPH 590
+ ++ V + + + G T + + +IA+ + ++
Sbjct: 247 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306
Query: 591 LNTNK 595
Sbjct: 307 GEQGL 311
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.3 bits (93), Expect = 5e-04
Identities = 12/117 (10%), Positives = 30/117 (25%), Gaps = 22/117 (18%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI-----------------IWDVDPVTFTC 337
++ + F G ++ K+T I V
Sbjct: 247 AAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT 306
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPE 392
+ + + + D + L +++ + + V+L+ PE
Sbjct: 307 SGPISNGHDSDAII---AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPE 360
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 604 | |||
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.98 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.98 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.98 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.98 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.97 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.94 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.94 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.94 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.93 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.92 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.92 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.91 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.91 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.88 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.88 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.88 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.87 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.85 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.81 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.81 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.79 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.78 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.75 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.74 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.73 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.71 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.7 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.55 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.53 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.51 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.48 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.34 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.3 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.2 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.19 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.15 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.13 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.12 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.1 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.08 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.08 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.07 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.03 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.03 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.97 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.93 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.93 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.9 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.76 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.76 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.63 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.44 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.43 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 98.09 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.95 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.88 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.86 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.76 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.75 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.59 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.52 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.44 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 97.36 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.26 | |
| d1uuja_ | 76 | Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-te | 97.2 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.1 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.09 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 96.88 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 96.86 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.74 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.7 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 96.67 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 96.55 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 96.33 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.2 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.03 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.93 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 94.86 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 94.53 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 93.98 | |
| d1wp5a_ | 323 | Topoisomerase IV subunit A, ParC, C-terminal domai | 93.77 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 93.2 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 92.49 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 91.26 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 87.83 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 86.76 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 81.93 | |
| d1suua_ | 304 | DNA gyrase A C-terminal domain {Lyme disease spiro | 81.67 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 81.55 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.3e-40 Score=322.43 Aligned_cols=284 Identities=18% Similarity=0.314 Sum_probs=254.6
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.++|+||++.|++++|+|++++||||+.||+|+|||+. +.+.+.++.+|...|.+++|+|++.++++++.++ .+
T Consensus 10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~----~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~--~~ 83 (317)
T d1vyhc1 10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDSVQDISFDHSGKLLASCSADM--TI 83 (317)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETT----TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS--CC
T ss_pred cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC----CCCEEEEEeCCCCcEEEEeeeccccccccccccc--cc
Confidence 46799999999999999999999999999999999998 5567788999999999999999999999999988 79
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
..|+.........+. .+...+.++.|+|++..+++++.|+.+++||+. ++.+..+.++ .+.+++++++++.+++++
T Consensus 84 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (317)
T d1vyhc1 84 KLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 162 (317)
T ss_dssp CEEETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ccccccccccccccc-cccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEe
Confidence 999998887766665 677889999999999999999999999999994 6777777665 689999999999999999
Q ss_pred CCCeEEEEEcCCCcccccc-cCCCCeeEEEECCC--------------------CCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 451 THHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDAT--------------------DRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~--------------------~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
.|+.|++|+..+......+ .+...+.++.++|+ +.++++++.|+.|++||+++++++.+
T Consensus 163 ~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 242 (317)
T d1vyhc1 163 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242 (317)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEE
Confidence 9999999999987655443 45677888888774 45789999999999999999999999
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+.+|...+ ..+.++|++++|++|+.||.|++||+.+++++.++.+|.+.|++++|+|+ +.+|+||+.||+|+|||
T Consensus 243 ~~~~~~~v---~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~-~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 243 LVGHDNWV---RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EECCSSCE---EEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSS-SSCEEEEETTSEEEEEC
T ss_pred EeCCCCCE---EEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCeEEEeC
Confidence 99988754 44556799999999999999999999999999999999999999999999 78999999999999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-39 Score=327.00 Aligned_cols=287 Identities=13% Similarity=0.183 Sum_probs=245.5
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCc-eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF-TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~-~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
+.++.+ +|...|+|++|+|+|++||||+ ||.|+|||+..... .........+|...|.+++|+|++++|++++.|+
T Consensus 43 ~~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg- 119 (337)
T d1gxra_ 43 RQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS- 119 (337)
T ss_dssp EEEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-
T ss_pred eEEEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccc-
Confidence 445555 7999999999999999999997 89999999974322 1223345567999999999999999999999998
Q ss_pred eEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCE
Q psy10566 371 HELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~ 445 (604)
.|++||+.... ....+. .|...+.+++|+|++..+++++.|+.|.+|++. ++......++ .+.++++++++..
T Consensus 120 -~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~ 197 (337)
T d1gxra_ 120 -TLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp -EEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred -ccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 89999987543 333433 677889999999999999999999999999995 4555555544 6999999999999
Q ss_pred EEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~ 525 (604)
+++++.|+.+++||+++.+......+..+|.+++|+|+++++++++.|+.+++||++++.... ...|... +..+.+
T Consensus 198 ~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~---i~~v~~ 273 (337)
T d1gxra_ 198 LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LHLHESC---VLSLKF 273 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-ECCCSSC---EEEEEE
T ss_pred cccccccccccccccccceeecccccccceEEEEEcccccccceecccccccccccccccccc-ccccccc---cceEEE
Confidence 999999999999999998887778889999999999999999999999999999999887653 4455554 444566
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+|++++|++|+.||.|++||..+++.+..+. |.+.|++++|+|+ +.+|++|+.||+|+|||+
T Consensus 274 s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d-~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVD-DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTT-SCEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCC-CCEEEEEeCCCeEEEEEE
Confidence 7999999999999999999999999988765 7889999999999 789999999999999986
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.3e-38 Score=320.16 Aligned_cols=281 Identities=24% Similarity=0.337 Sum_probs=229.1
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE------------------eccCCCCeeEEEECCCC
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT------------------LEGHTLGVAYLAWSPDS 359 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~------------------l~~h~~~V~~l~~spd~ 359 (604)
.+|++.|+|++|||||++||+|+ |++|+|||+.+. ..+.. ..+|...|++++|+|++
T Consensus 59 ~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 133 (388)
T d1erja_ 59 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG----SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 133 (388)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC----CEEEEECC-----------------CCCCBEEEEEECTTS
T ss_pred CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEeccc----ceEeeecccccccccccccccccccCCCCCEEEEEECCCC
Confidence 36999999999999999999986 899999999732 22222 23577789999999999
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee-eeece-e-EEE
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD-SWEGV-R-VNC 436 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~-~-v~~ 436 (604)
++|++++.|+ .|++||..+++...... +|...|.+++|++++..+++++.++.+++||....... ....+ . +..
T Consensus 134 ~~l~s~~~dg--~v~i~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 210 (388)
T d1erja_ 134 KFLATGAEDR--LIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTV 210 (388)
T ss_dssp SEEEEEETTS--CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred Ccceeccccc--ccccccccccccccccc-cccccccccccccccccccccccceeeeeeeccccccccccccccccccc
Confidence 9999999998 89999999999887776 68889999999999999999999999999999654333 22222 3 444
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCccccc--------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee
Q psy10566 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL--------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
..+.++++.+++++.|+.|++||..+...... ..+..+|.+++|+|+++++++++.|+.|++||++++....
T Consensus 211 ~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~ 290 (388)
T d1erja_ 211 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 290 (388)
T ss_dssp EECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------
T ss_pred cccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccc
Confidence 44455889999999999999999987654332 2356789999999999999999999999999998754332
Q ss_pred ------------EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE------cCC
Q psy10566 509 ------------KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW------NPV 570 (604)
Q Consensus 509 ------------~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~------sp~ 570 (604)
....|.. .+.++.++|++++|++|+.||.|++||+.+++++.++.+|.+.|+++++ +|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd 367 (388)
T d1erja_ 291 DSKTPNSGTCEVTYIGHKD---FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE 367 (388)
T ss_dssp --------CEEEEEECCSS---CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTT
T ss_pred ccccccccceeeecccccc---eEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCC
Confidence 2333444 3445666799999999999999999999999999999999999999975 567
Q ss_pred CCcEEEEEeCCCcEEEECCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+.+||||+.||+|+||+++
T Consensus 368 -~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 368 -YNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp -CEEEEEEETTSEEEEEEEE
T ss_pred -CCEEEEEeCCCEEEEEeee
Confidence 7899999999999999974
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.8e-37 Score=304.73 Aligned_cols=289 Identities=17% Similarity=0.218 Sum_probs=243.0
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
..+..++|+||++.|++++|+|++++||||+.||+|+|||+. +...+..+..|..+|.+++|+|++.++++++.|+
T Consensus 44 ~~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~----~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~ 119 (340)
T d1tbga_ 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY----TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT----TTEEEEEEECSCSCEEEEEECTTSSEEEEEETTC
T ss_pred ceeeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecc----cceeEEEEecccccEEeeEeeccceeeeeecccc
Confidence 356778999999999999999999999999999999999998 5667888999999999999999999999999998
Q ss_pred ceEEEEEECCCce----EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee---eceeEEEEEEcCC
Q psy10566 370 CHELWVWNIETEL----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW---EGVRVNCLWCRSD 442 (604)
Q Consensus 370 ~~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~v~~l~~s~~ 442 (604)
.+.+|+..... ....+. ++..... ..+...+..+.....+.....+.......... ....+....+.+.
T Consensus 120 --~i~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (340)
T d1tbga_ 120 --ICSIYNLKTREGNVRVSRELA-GHTGYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp --CEEEEESSSSCSCCCEEEEEC-CCSSCEE-EEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTT
T ss_pred --eeecccccccccccccceecc-ccccccc-ccccccccccccccccccccccccccccccccccccceeEeeeccccc
Confidence 89999976643 233333 4444444 44445667788888899998888854333222 2236888999999
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
+..+++++.|+.|++||+++......+ .|..+|.+++|+|++.++++++.|+.|++||++....+..+...... ..+.
T Consensus 196 ~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~-~~i~ 274 (340)
T d1tbga_ 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII-CGIT 274 (340)
T ss_dssp SSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC-SCEE
T ss_pred cceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccccccccccc-CceE
Confidence 999999999999999999987765544 47889999999999999999999999999999998887776533322 2345
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.+.+++++++|++|+.||.|++||+.+++++.++.+|.++|++++|+|+ +.+|+|||.||+|+|||
T Consensus 275 ~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d-~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCC-CCEEEEEccCCEEEEeC
Confidence 5666799999999999999999999999999999999999999999999 78999999999999997
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=7.3e-37 Score=300.81 Aligned_cols=285 Identities=15% Similarity=0.203 Sum_probs=226.4
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
+..+++.||.+.|++++|+|||++||||+.||+|++||+. +.+....+ .+|...|++++|+|++. +++++.|+
T Consensus 3 ~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~----~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~- 76 (299)
T d1nr0a2 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS----TGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDD- 76 (299)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTT-
T ss_pred ccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECC----CCcEEEEEcCCCCCcEEEEEeeccce-eeccccee-
Confidence 4678999999999999999999999999999999999998 44455555 46899999999999986 45667777
Q ss_pred eEEEEEECCCceEE--EEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEE
Q psy10566 371 HELWVWNIETELLR--VKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 371 ~~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~ 448 (604)
.+++|+....... ......+...+.+++|+|++..+++++ ++.+.+|+.. +.......+.+.+++++|+++.+++
T Consensus 77 -~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~ 153 (299)
T d1nr0a2 77 -HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHG-KLTEVPISYNSSCVALSNDKQFVAV 153 (299)
T ss_dssp -EEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETT-EEEEEECSSCEEEEEECTTSCEEEE
T ss_pred -eEEEeccCCccccccccccccccccccccccccccccccccc-cccccccccc-ccccccccccccccccccccccccc
Confidence 7999998654321 111123456789999999998776654 5789999853 3334445567889999999999999
Q ss_pred EeCCCeEEEEEcCCCccc--ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE---eeccccceEEEEee
Q psy10566 449 ADTHHRIRTYNFEHLTDS--NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK---FQGVTQGQFTIHSC 523 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~---~~~~~~~~~~i~~~ 523 (604)
++.|+.|++||+.+.... ....+..+|.+++|+|++.++++++.++.|++||+.++..... +.+|.. .+.++
T Consensus 154 g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~---~v~~l 230 (299)
T d1nr0a2 154 GGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTA---KVACV 230 (299)
T ss_dssp EETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSS---CEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccc
Confidence 999999999999876543 3445788999999999999999999999999999988765543 445555 44555
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEE--eeCC-CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIAT--LSGH-TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~--l~~h-~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.++|++++|++|+.||.|++||++++..... ...| ...|.++.|.+ +.+|+|++.||+|++||+.
T Consensus 231 ~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEE--TTEEEEEETTSCEEEEECC
T ss_pred cccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECC--CCEEEEEeCCCEEEEEecc
Confidence 6679999999999999999999997654333 3334 45677776654 5789999999999999984
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.4e-36 Score=298.20 Aligned_cols=278 Identities=13% Similarity=0.142 Sum_probs=232.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
+.+.+..++++|+|+.||.++ ++.|.+|+++ .......+.+|...|++++|+|+|++|++|+.|+ +|++||+.
T Consensus 16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~----~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg--~i~iwd~~ 88 (311)
T d1nr0a1 16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVG----SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG--NVRIWDTT 88 (311)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETT----CSSCCEEECCCSSCEEEEEECTTSSEEEEEETTS--EEEEEESS
T ss_pred CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECC----CCceeEEEcCCCCCEEEEEEeCCCCeEeccccCc--eEeeeeee
Confidence 455677889999999999986 6789999998 4455677889999999999999999999999998 89999998
Q ss_pred CceEEE-EecCCCCCCeEEEEEecCCCEEEEEecC--CeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCE-EEEEeCC
Q psy10566 380 TELLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGIR--GQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKS-VLAADTH 452 (604)
Q Consensus 380 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~-l~~~~~d 452 (604)
++.... .....|...|.+++|+|+++++++++.+ ..+++|+++ ++....+.+| .|.+++|+|++++ +++++.|
T Consensus 89 ~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d 168 (311)
T d1nr0a1 89 QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD 168 (311)
T ss_dssp STTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETT
T ss_pred ccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeecccccc
Confidence 876432 2223678899999999999999999864 568999995 5666666655 6999999999885 7789999
Q ss_pred CeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-------ccccceEEEEeee
Q psy10566 453 HRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-------GVTQGQFTIHSCF 524 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~-------~~~~~~~~i~~~~ 524 (604)
+.|++||+++.+..... .+..+|.++.++|+++++++++.|+.|++||+.++..+..+. +|.. .|.++.
T Consensus 169 ~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~---~V~~~~ 245 (311)
T d1nr0a1 169 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG---SVFGLT 245 (311)
T ss_dssp SCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS---CEEEEE
T ss_pred cccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccc---cccccc
Confidence 99999999987665554 468899999999999999999999999999999988777665 3444 345566
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC---CeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR---TVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~---~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
++|++++|++|+.||.|+|||+++++++.++..|.. .+.++.|+ +..|++++.||.|++||++
T Consensus 246 ~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~---~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 246 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT---KQALVSISANGFINFVNPE 311 (311)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC---SSCEEEEETTCCEEEEETT
T ss_pred cCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEec---CCEEEEEECCCEEEEEeCC
Confidence 689999999999999999999999999999987753 44556665 4568999999999999974
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.7e-36 Score=304.49 Aligned_cols=285 Identities=15% Similarity=0.141 Sum_probs=228.6
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
+.++|+|++|+|||++||+|+.||.|+|||.. ......+..+.+|.++|.+++|+|++++|++++.|+ +|++||+.
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~--~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~--~i~vWd~~ 81 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--GNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR--NAYVWTLK 81 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEE--TTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS--CEEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECC--CCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCC--eEEEEeec
Confidence 34789999999999999999999999999997 446667888999999999999999999999999998 89999998
Q ss_pred CceEEEEe-cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Cee----eeeec--eeEEEEEEcCCCCEEEEEeC
Q psy10566 380 TELLRVKL-NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVL----DSWEG--VRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 380 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~----~~~~~--~~v~~l~~s~~g~~l~~~~~ 451 (604)
++...... ...+...|++++|+|+++.|++++.|+.+++|+++. ... ..... ..|.+++|+|+++++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~ 161 (371)
T d1k8kc_ 82 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 161 (371)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred ccccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceecccc
Confidence 87654333 236778899999999999999999999999999842 211 11222 26999999999999999999
Q ss_pred CCeEEEEEcCCCccc-------------------ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 452 HHRIRTYNFEHLTDS-------------------NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 452 dg~I~i~d~~~~~~~-------------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
|+.|++||....... ....+...+.+++|+|+++++++++.|+.|++||+.++..+..+..
T Consensus 162 D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 241 (371)
T d1k8kc_ 162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 241 (371)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec
Confidence 999999998653211 1123466799999999999999999999999999999999999998
Q ss_pred cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC--CcceEE------------------------------------
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR--ELPIAT------------------------------------ 554 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~--~~~~~~------------------------------------ 554 (604)
|...+. ++.+++++.+|++|+ |+.+++|.... +.....
T Consensus 242 ~~~~v~---s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (371)
T d1k8kc_ 242 ETLPLL---AVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 317 (371)
T ss_dssp SSCCEE---EEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------
T ss_pred ccccce---eeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEecccccc
Confidence 887544 445568998888765 67666655432 111000
Q ss_pred ---eeCCCCCeeEEEEcCCC---CcEEEEEeCCCcEEEECCCCC
Q psy10566 555 ---LSGHTRTVSCVAWNPVY---HQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 555 ---l~~h~~~V~~v~~sp~~---~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
...|.+.|+++++.|.+ ...|+|+|.||.|+||++++.
T Consensus 318 ~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~ 361 (371)
T d1k8kc_ 318 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361 (371)
T ss_dssp CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcC
Confidence 02488899999997752 246999999999999998653
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.3e-34 Score=286.66 Aligned_cols=252 Identities=15% Similarity=0.170 Sum_probs=211.4
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
....+.+.+|.+.|++++|+|+|++||+|+.||+|+|||+.. ........+.+|..+|.+++|+|+++++++++.+..
T Consensus 48 ~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~--~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~ 125 (311)
T d1nr0a1 48 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ--TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 125 (311)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS--TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred CceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeec--cccccccccccccCcccccccccccccccccccccc
Confidence 456677899999999999999999999999999999999983 333345668889999999999999999999987654
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSV 446 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l 446 (604)
..+++|++++++....+. .|...|++++|+|++.+ +++|+.|+.|++||++ ++....+..+ .|.++.++|+++.+
T Consensus 126 ~~~~v~~~~~~~~~~~l~-~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l 204 (311)
T d1nr0a1 126 RFGHVFLFDTGTSNGNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 204 (311)
T ss_dssp CSEEEEETTTCCBCBCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred cccccccccccccccccc-ccccccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccc
Confidence 478999999988776665 67889999999999885 7889999999999996 4556666554 79999999999999
Q ss_pred EEEeCCCeEEEEEcCCCccccc--------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceE
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNL--------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQF 518 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~ 518 (604)
++++.|+.|++||..+...... ..|...|.+++|+|++++|++|+.||.|++||++++++++++..+.....
T Consensus 205 ~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~ 284 (311)
T d1nr0a1 205 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 284 (311)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccc
Confidence 9999999999999987644332 23577899999999999999999999999999999999999887654322
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.+..+. ++++++++++.||.|++||.+
T Consensus 285 ~~~~~~--~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 285 QQLGII--WTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp CEEEEE--ECSSCEEEEETTCCEEEEETT
T ss_pred eEEEEE--ecCCEEEEEECCCEEEEEeCC
Confidence 222222 356689999999999999974
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-33 Score=281.64 Aligned_cols=287 Identities=23% Similarity=0.288 Sum_probs=229.9
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.++.++|+||++.|.+ +++++|++|||||.||+|+|||+. +.+.+.++.+|...|.+++|+|+ +|++++.|+
T Consensus 5 ~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~----~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~ 77 (342)
T d2ovrb2 5 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAV----TGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDR 77 (342)
T ss_dssp CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETT----TCCEEEECCCCSSCEEEEEEETT--EEEEEETTS
T ss_pred CCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECC----CCCEEEEEeCCCCCEEEEEeCCC--ccccceecc
Confidence 45677889999999875 477789999999999999999998 56678899999999999999875 899999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCe--------------------------------------EEEEEecCCCEEEEEe
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSL--------------------------------------TSCSWNRDGTKFVCGG 411 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v--------------------------------------~~~~~~~~~~~l~s~~ 411 (604)
.+++|+............ ....+ ....+.+....+++++
T Consensus 78 --~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (342)
T d2ovrb2 78 --TLKVWNAETGECIHTLYG-HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGA 154 (342)
T ss_dssp --CEEEEETTTTEEEEEECC-CSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEE
T ss_pred --cccccccccccceecccc-cceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeec
Confidence 899999876554433321 11111 1123344556788888
Q ss_pred cCCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEE
Q psy10566 412 IRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALL 489 (604)
Q Consensus 412 ~dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~ 489 (604)
.|+.|++||.. ...+..+.++......+.+++..+++++.||.|++||++........ .+...+.+++++ ++++++
T Consensus 155 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s 232 (342)
T d2ovrb2 155 YDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVS 232 (342)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEE
T ss_pred CCCeEEEeecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEE
Confidence 99999999984 56667777776667777889999999999999999999987665444 356677777665 569999
Q ss_pred EecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee-----CCCCCeeE
Q psy10566 490 NVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS-----GHTRTVSC 564 (604)
Q Consensus 490 ~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~-----~h~~~V~~ 564 (604)
++.|+.|++||+...+....+..+......+.++. ++++++++|+.||.|++||+++++.+.++. +|.+.|++
T Consensus 233 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~ 310 (342)
T d2ovrb2 233 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ--FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR 310 (342)
T ss_dssp EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEE--ECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEE
T ss_pred EcCCCEEEEEecccccccccccccceeeeceeecc--cCCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEE
Confidence 99999999999999988888877665544444443 456799999999999999999999988874 57788999
Q ss_pred EEEcCCCCcEEEEEeCCCc----EEEECCCC
Q psy10566 565 VAWNPVYHQMIASVSDDCT----VRIWGPHL 591 (604)
Q Consensus 565 v~~sp~~~~~l~s~s~Dg~----I~iW~~~~ 591 (604)
++|+|+ +.++++|+.||+ |++||++.
T Consensus 311 v~~s~~-~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 311 IRASNT-KLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EEECSS-EEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEECCC-CCEEEEEeCCCCCeeEEEEEeCCC
Confidence 999999 899999999986 99999874
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-32 Score=274.00 Aligned_cols=263 Identities=18% Similarity=0.272 Sum_probs=224.2
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
+....+||........+ .......+|.+.|.+++|+|||++|++|+.||+|++||+. .........+..|...|.++
T Consensus 71 dg~V~iWd~~~~~~~~~-~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~~ 147 (337)
T d1gxra_ 71 KGCVKVWDISHPGNKSP-VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA--APTPRIKAELTSSAPACYAL 147 (337)
T ss_dssp BSEEEEEETTSTTCCSC-SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC--CC--EEEEEEECSSSCEEEE
T ss_pred CCEEEEEEccCCcccce-eEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc--cccccccccccccccccccc
Confidence 44566787544332222 2234566899999999999999999999999999999987 33455667888999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec-
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG- 431 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~- 431 (604)
+|+|++.++++++.++ .|++|++.+++...... .|...|.+++|++++..+++++.|+.+++||++ ++.+..+..
T Consensus 148 ~~~~~~~~l~s~~~d~--~i~~~~~~~~~~~~~~~-~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~ 224 (337)
T d1gxra_ 148 AISPDSKVCFSCCSDG--NIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224 (337)
T ss_dssp EECTTSSEEEEEETTS--CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred cccccccccccccccc--ccccccccccccccccc-ccccccccccccccccccccccccccccccccccceeecccccc
Confidence 9999999999999998 89999999998877665 678899999999999999999999999999995 566655543
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 432 VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
..|.+++|+|+++.+++++.++.+++||+..........+...|.+++|+|+++++++++.|+.|++||+.+++.+..+.
T Consensus 225 ~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 304 (337)
T d1gxra_ 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK 304 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEEcccccccceeccccccccccccccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc
Confidence 37999999999999999999999999999998887778889999999999999999999999999999999999887765
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
|... +.++.++|++++|++|+.||+|+|||+
T Consensus 305 -~~~~---v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 305 -ESSS---VLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp -CSSC---EEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred -CCCC---EEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 3343 445566799999999999999999996
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.5e-32 Score=272.11 Aligned_cols=283 Identities=16% Similarity=0.214 Sum_probs=225.3
Q ss_pred eeecccCCCcE-EEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 294 TQVLNDHCDEV-WFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 294 ~~~l~~H~~~V-~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
..+|+||.+.| +|++| +|++||||+.||+|+|||+. +.+.+.++.+|.++|.+++|+|+ .+|++++.|+ +
T Consensus 5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~----~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~--~ 75 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDR--T 75 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETT----TTEEEEEEECCSSCEEEEEEETT-TEEEEEETTC--C
T ss_pred cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECC----CCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccc--c
Confidence 56799999886 55555 67899999999999999998 56778999999999999999986 5899999998 8
Q ss_pred EEEEECCCceEEEEecCC-CCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-eeee----------------------
Q psy10566 373 LWVWNIETELLRVKLNHS-PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ-VLDS---------------------- 428 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~---------------------- 428 (604)
|++|+............. +........+.+++..+++++.|+.|++||+... ....
T Consensus 76 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (355)
T d1nexb2 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 155 (355)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEE
T ss_pred cccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceee
Confidence 999999998877665532 2333456777889999999999999999998532 1111
Q ss_pred -eeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 429 -WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 429 -~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
...+......+.++++.++++..|+.|++||+.+.+...... +...+.++.++|++..+++++.|+.|++||++++..
T Consensus 156 ~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~ 235 (355)
T d1nexb2 156 VLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 235 (355)
T ss_dssp EEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCE
T ss_pred eeeeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccc
Confidence 111112234566788999999999999999998876554443 577889999999999999999999999999999999
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE-cCCCCcEEEEEeCCCcEE
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW-NPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~-sp~~~~~l~s~s~Dg~I~ 585 (604)
+..+.+|...+..+. + ++++|++|+.||.|++||++++.. .+..|...+.++.+ +++ +.++++|+ ||+|+
T Consensus 236 ~~~~~~h~~~v~~~~---~--~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~-~~~l~~g~-d~~i~ 306 (355)
T d1nexb2 236 MYTLQGHTALVGLLR---L--SDKFLVSAAADGSIRGWDANDYSR--KFSYHHTNLSAITTFYVS-DNILVSGS-ENQFN 306 (355)
T ss_dssp EEEECCCSSCCCEEE---E--CSSEEEEECTTSEEEEEETTTCCE--EEEEECTTCCCCCEEEEC-SSEEEEEE-TTEEE
T ss_pred ccccccccccccccc---c--ccceeeeeecccccccccccccce--ecccccCCceEEEEEcCC-CCEEEEEe-CCEEE
Confidence 999999988665542 2 467999999999999999998764 45556666766654 555 67776665 89999
Q ss_pred EECCCCCCC
Q psy10566 586 IWGPHLNTN 594 (604)
Q Consensus 586 iW~~~~~~~ 594 (604)
|||+++++.
T Consensus 307 vwd~~tg~~ 315 (355)
T d1nexb2 307 IYNLRSGKL 315 (355)
T ss_dssp EEETTTCCB
T ss_pred EEECCCCCE
Confidence 999998764
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.8e-32 Score=268.06 Aligned_cols=283 Identities=13% Similarity=0.115 Sum_probs=220.9
Q ss_pred cEEEEEEcCCCCeEEEEECCCe-EEEEEeCCCCceeEeeEEeccC-CCCeeEEEECC--CCCeEEEEeCCCceEEEEEEC
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTT-VIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSP--DSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~-i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~sp--d~~~l~s~~~d~~~~i~vwd~ 378 (604)
.+++++|+|+|+.||.++.+.. |+.|+.. .........+.+| ...|++++|+| ++.+|++++.|+ +|++||+
T Consensus 19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~--~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg--~i~iWd~ 94 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDG--DSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG--KVIVWGW 94 (325)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSS--CCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTS--EEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEEeCC--CCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCC--CEEEeee
Confidence 4678999999999998875532 4555544 4444556778887 46899999998 567999999998 8999998
Q ss_pred CCceEE-------EEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCE-
Q psy10566 379 ETELLR-------VKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKS- 445 (604)
Q Consensus 379 ~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~- 445 (604)
..+... ......+.++|.+++|+++++++++++. ++.+.+|+.+ ++.+..+.+| .+.+++|+|++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 174 (325)
T d1pgua1 95 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMR 174 (325)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCE
T ss_pred cCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccce
Confidence 654311 1112357788999999999999988765 5689999984 7777777765 7999999999875
Q ss_pred EEEEeCCCeEEEEEcCCCccccc----ccCCCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNL----LQEDHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~----~~~~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
+++++.|+.+++||....+.... ..+...|.+++|+|+ +.++++++.|+.|++||+++++.+..+.+|...+..+
T Consensus 175 ~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~ 254 (325)
T d1pgua1 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 254 (325)
T ss_dssp EEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC
T ss_pred EEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccc
Confidence 67899999999999887543332 235678999999996 6889999999999999999999999999887765433
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC--eeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT--VSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~--V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
......+++++|++++.|+.|+|||+++++++..+..|... +..+++.+.+..+|+++|.||+|+|||+
T Consensus 255 ~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 255 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred eeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 32222278999999999999999999999999988877544 3344444332458899999999999986
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-31 Score=260.06 Aligned_cols=270 Identities=19% Similarity=0.210 Sum_probs=213.5
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+++++|+||.++|++++|+| |+||+.||+|++||+. +. ..+|...|.+++|++++ .+++++.|+
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~----~~-----~~~h~~~V~~~~~~~~~-~~~s~s~D~-- 67 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS----SM-----HQDHSNLIVSLDNSKAQ-EYSSISWDD-- 67 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTT----EE-----ECCCCSCEEEEECCSTT-CCEEEETTT--
T ss_pred ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECC----CC-----CCCCCCCEEEEEecCCC-eEEEEeecc--
Confidence 57889999999999999997 9999999999999987 32 35799999999999765 578899998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeeceeEEEEEEcCCCCEEEEEe
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~v~~l~~s~~g~~l~~~~ 450 (604)
++++|++...+ ....+..+++++++..+++++ ++.+.+|+. .++.+..+... ....++++++..+++++
T Consensus 68 ~v~~w~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~ 137 (287)
T d1pgua2 68 TLKVNGITKHE--------FGSQPKVASANNDGFTAVLTN-DDDLLILQSFTGDIIKSVRLN-SPGSAVSLSQNYVAVGL 137 (287)
T ss_dssp EEEETTEEEEE--------CSSCEEEEEECSSSEEEEEET-TSEEEEEETTTCCEEEEEECS-SCEEEEEECSSEEEEEE
T ss_pred ccccccccccc--------cccceeeeeeccCCceEEEee-cccceeeeccceeeeeecccc-ceeeeeeccCcceeeec
Confidence 89999976432 234577888988887776655 556777777 56666655443 23346677888888888
Q ss_pred CCC-eEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee-EeeccccceEEEEee---
Q psy10566 451 THH-RIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR-KFQGVTQGQFTIHSC--- 523 (604)
Q Consensus 451 ~dg-~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~-~~~~~~~~~~~i~~~--- 523 (604)
.++ .+++|++......... .+..++++++|+|++.++++++.||.|++||+.++.... .+.+|...+..+...
T Consensus 138 ~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~ 217 (287)
T d1pgua2 138 EEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAE 217 (287)
T ss_dssp TTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC
T ss_pred cccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccc
Confidence 775 6999998765443332 356789999999999999999999999999999887654 456777765554321
Q ss_pred ----eCCCCCcEEEEEeCCCcEEEEeCCC-CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 524 ----FGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 524 ----~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
....++.++++|+.|++|+|||+++ ++.+..+.+|.+.|++++|+|+ + .|+|++.||+|++|++
T Consensus 218 ~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~-~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-S-TLVSSGADACIKRWNV 286 (287)
T ss_dssp ------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET-T-EEEEEETTSCEEEEEE
T ss_pred cccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCC-C-EEEEEECCCeEEEEEE
Confidence 1235678999999999999999976 5677788899999999999997 4 5889999999999985
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-30 Score=253.24 Aligned_cols=272 Identities=22% Similarity=0.350 Sum_probs=217.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+.++...+|...|+|++| ||++||||+.||+|+|||+. +.+.+.++.+|..+|++++| ++++|++++.|+
T Consensus 6 ~~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~----~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~-- 75 (293)
T d1p22a2 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN----TLECKRILTGHTGSVLCLQY--DERVIITGSSDS-- 75 (293)
T ss_dssp CCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESS----SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS--
T ss_pred EEEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECC----CCcEEEEEecCCCCEeeeec--ccceeecccccc--
Confidence 445667789999998765 78999999999999999998 66778899999999999987 567999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC----eeeeeece--eEEEEEEcCCCCE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ----VLDSWEGV--RVNCLWCRSDGKS 445 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~--~v~~l~~s~~g~~ 445 (604)
.|++|++..+.......... .....+.+....++++..++.+.+|+.... .......+ .+.... +....
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~ 150 (293)
T d1p22a2 76 TVRVWDVNTGEMLNTLIHHC---EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD--FDDKY 150 (293)
T ss_dssp CEEEEESSSCCEEEEECCCC---SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE--EETTE
T ss_pred cccccccccccccccccccc---cccccccccccceeecccccceeEeeccccccccccccccccccccccce--ecccc
Confidence 89999999998777765322 234456667789999999999999998532 22223333 344444 45567
Q ss_pred EEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeee
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~ 524 (604)
+++++.|+.|++||.++.+....+. +...+..+.+ ++..+++++.|+.|++||+++...+..+.++...+.. .
T Consensus 151 ~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~---~- 224 (293)
T d1p22a2 151 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC---I- 224 (293)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE---E-
T ss_pred cccccCCCceeeecCCCCcEEEEEcccccccccccC--CCCeEEEecCCCEEEEEecccceeeeeecccceeeee---c-
Confidence 8899999999999999877654443 4556666655 4678999999999999999999999988887775432 2
Q ss_pred CCCCCcEEEEEeCCCcEEEEeCCC---------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 525 GGANQDFVASGSEDGKVYIWHVKR---------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 525 ~~~~~~~l~sgs~dg~I~iwd~~~---------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
++++.+|++|+.||.|++||+.+ ..++..+.+|.+.|++++|+ +.+|+|||.||+|+|||
T Consensus 225 -~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d---~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 225 -RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD---EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp -ECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC---SSCEEECCSSSEEEEEC
T ss_pred -cccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc---CCEEEEEecCCEEEEeC
Confidence 36788999999999999999753 34678899999999999996 45799999999999997
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.6e-30 Score=262.10 Aligned_cols=269 Identities=19% Similarity=0.228 Sum_probs=216.1
Q ss_pred EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecC--------
Q psy10566 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH-------- 389 (604)
Q Consensus 318 sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~-------- 389 (604)
.+..++.+.+|+..........+....+|.+.|+|++|+|||++|++|+ |+ +|++||+.+++.+..+..
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~--~i~iW~~~~~~~~~~~~~~~~~~~~~ 109 (388)
T d1erja_ 33 KKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NK--TTQVYRVSDGSLVARLSDDSAANKDP 109 (388)
T ss_dssp EEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BS--CEEEEETTTCCEEEEECC--------
T ss_pred ccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CC--eEEEEEecccceEeeecccccccccc
Confidence 4556778888986522222222333346999999999999999999876 66 799999999887765532
Q ss_pred ---------CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEE
Q psy10566 390 ---------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRT 457 (604)
Q Consensus 390 ---------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i 457 (604)
.+...|++++|+|++++|++|+.||.|++||.. ++.+..+.++ .|.++.+++++..+++++.++.+++
T Consensus 110 ~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~ 189 (388)
T d1erja_ 110 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI 189 (388)
T ss_dssp ---------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence 355679999999999999999999999999994 5666666655 7999999999999999999999999
Q ss_pred EEcCCCcccccccCCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCCceeeEee-------ccccceEEEEeeeCCCCC
Q psy10566 458 YNFEHLTDSNLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDRILLRKFQ-------GVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 458 ~d~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~ 529 (604)
||..+..............++.+.+ ++.++++++.|+.|++||..++.....+. +|.. .+.++.++|++
T Consensus 190 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~s~~~ 266 (388)
T d1erja_ 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD---SVYSVVFTRDG 266 (388)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS---CEEEEEECTTS
T ss_pred eeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCC---CEEEEEECCCC
Confidence 9999877666666666666666654 78899999999999999999988776654 2333 34556667999
Q ss_pred cEEEEEeCCCcEEEEeCCCCc------------ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 530 DFVASGSEDGKVYIWHVKREL------------PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~------------~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++|++|+.||.|++||+.++. .......|...|.+++|+|+ +.+|++|+.||+|++||+.+++
T Consensus 267 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~sg~~dg~i~vwd~~~~~ 341 (388)
T d1erja_ 267 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGN 341 (388)
T ss_dssp SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCC-CCEEEEEeCCCEEEEEECCCCc
Confidence 999999999999999997543 34455678999999999999 8999999999999999998876
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=8.2e-31 Score=260.14 Aligned_cols=296 Identities=10% Similarity=0.041 Sum_probs=227.1
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~ 370 (604)
+.++.+++|++.|++|+|+|++++||+||.||+|+|||+......... ....+|..+|.+++|+|++ .+|++|+.|+
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~-~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~- 79 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL-LQSLRYKHPLLCCNFIDNTDLQIYVGTVQG- 79 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEE-EEEEECSSCEEEEEEEESSSEEEEEEETTS-
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEE-EEecCCCCCEEEEEEeCCCCCEEEEccccc-
Confidence 467889999999999999999999999999999999999754434333 3344699999999999875 4788888888
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-C----eeeeeec----eeEEEEEEcC
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-Q----VLDSWEG----VRVNCLWCRS 441 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~----~~~~~~~----~~v~~l~~s~ 441 (604)
.|++|+...+.........+........+.++...+++++.++.+++||++. . ....... .......+.+
T Consensus 80 -~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (342)
T d1yfqa_ 80 -EILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp -CEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred -ceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeec
Confidence 8999999998877777766666667777888999999999999999999831 1 1111111 1355667788
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccccc----cCCCCeeEEEE-CCCCCEEEEEecCCeEEEEecCCCceee--------
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSNLL----QEDHPVMSFTI-DATDRLALLNVSTQGVHLWDLRDRILLR-------- 508 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~~~----~~~~~i~~~~~-s~~~~~l~~~~~dg~I~lwd~~~~~~~~-------- 508 (604)
.+..+++++.|+.|++||+......... .....+.+..+ ..++..+++++.||.+.+|+........
T Consensus 159 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~ 238 (342)
T d1yfqa_ 159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp CSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred cCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccccee
Confidence 8999999999999999999876543322 22344555554 4567889999999999999986542211
Q ss_pred ----EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 509 ----KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 509 ----~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
....+......+.++.++|++++|++|+.||.|++||+.+++.+.++..+ ..+..++|+|+ +.++++++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~-~~~l~~a~sdd~~ 316 (342)
T d1yfqa_ 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACS-DNILCLATSDDTF 316 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEEC-SSEEEEEEECTHH
T ss_pred eeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeC-CCEEEEEEcCCcE
Confidence 11122333445667778899999999999999999999999999888644 34556778887 7889999899999
Q ss_pred EEECCCCC
Q psy10566 585 RIWGPHLN 592 (604)
Q Consensus 585 ~iW~~~~~ 592 (604)
++|..-..
T Consensus 317 ~~~~~~~~ 324 (342)
T d1yfqa_ 317 KTNAAIDQ 324 (342)
T ss_dssp HHCSSSCT
T ss_pred EEeeeeCC
Confidence 99977543
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=2.2e-30 Score=258.86 Aligned_cols=300 Identities=16% Similarity=0.208 Sum_probs=226.6
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
.++.|....+||.. ..++++++.+|.+.|++++|+|+ .+|++|+.|++|++|+.. ............+...
T Consensus 28 tgs~Dg~i~vWd~~------~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~--~~~~~~~~~~~~~~~~ 98 (355)
T d1nexb2 28 TGADDKMIRVYDSI------NKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIK--KGCCTHVFEGHNSTVR 98 (355)
T ss_dssp EEETTTEEEEEETT------TTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETT--TTEEEEEECCCSSCEE
T ss_pred EEeCCCeEEEEECC------CCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccccc--cccccccccccccccc
Confidence 34456677788753 35678899999999999999986 589999999999999998 3333333333334455
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC--------------------CCeEEEEEecCCCEEEE
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE--------------------DSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~l~s 409 (604)
+....+++++..+++++.|+ .|++||+.++.........+. .......+.++++.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 176 (355)
T d1nexb2 99 CLDIVEYKNIKYIVTGSRDN--TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS 176 (355)
T ss_dssp EEEEEEETTEEEEEEEETTS--EEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEE
T ss_pred ccccccccccceeeeecCCC--cEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeee
Confidence 66778899999999999998 899999987654332211100 01122345668899999
Q ss_pred EecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCC
Q psy10566 410 GGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDR 485 (604)
Q Consensus 410 ~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~ 485 (604)
+..|+.|++||+. ++.+....++ .+.++.+++++..+++++.|+.|++||..+......+ .|...|.+++++ ++
T Consensus 177 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~ 254 (355)
T d1nexb2 177 GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DK 254 (355)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SS
T ss_pred ecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cc
Confidence 9999999999995 5555555543 6889999999999999999999999999987665544 467889999886 47
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE-EeeCCCCCeeE
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA-TLSGHTRTVSC 564 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~-~l~~h~~~V~~ 564 (604)
++++++.||.|++||++++... +..|......+ .++++++.++++|+ ||.|+|||+++++++. .+.+|.+.|++
T Consensus 255 ~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~--~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~ 329 (355)
T d1nexb2 255 FLVSAAADGSIRGWDANDYSRK--FSYHHTNLSAI--TTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWS 329 (355)
T ss_dssp EEEEECTTSEEEEEETTTCCEE--EEEECTTCCCC--CEEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEE
T ss_pred eeeeeeccccccccccccccee--cccccCCceEE--EEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEE
Confidence 9999999999999999887544 44454443333 34457888877765 8999999999999885 56789999999
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 565 VAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 565 v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
++|+|+ .++++++.||+++||.+
T Consensus 330 v~~~~~--~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 330 VNFKGK--TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp EEEETT--EEEEEEESSSCEEEEEE
T ss_pred EEEcCC--eEEEEEECCCcEEEEEE
Confidence 999986 58889999999777643
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.98 E-value=6e-30 Score=251.17 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=219.4
Q ss_pred eeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEE
Q psy10566 339 HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQ 418 (604)
Q Consensus 339 ~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 418 (604)
...+|.||.++|++++|+|++++|++|+.|+ +|++||+.+++....+. .|...|.+++|+|++..+++++.++.+..
T Consensus 9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg--~i~iWd~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~~~~~~~~~~~~ 85 (317)
T d1vyhc1 9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDA--TIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKL 85 (317)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSS--CEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCC--eEEEEECCCCCEEEEEe-CCCCcEEEEeeeccccccccccccccccc
Confidence 3467899999999999999999999999998 89999999999888886 68899999999999999999999999999
Q ss_pred EEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCC
Q psy10566 419 CDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 419 wd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg 494 (604)
|+.. ......+.++ .+.++.++++++.+++++.|+.+++||+++......+ .+...+.++++++++.++++++.|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 165 (317)
T d1vyhc1 86 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 165 (317)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCC
Confidence 9984 4444444433 6889999999999999999999999999987665544 4678899999999999999999999
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEee-----------------eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSC-----------------FGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~-----------------~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
.|++|++.++.....+.++......+... .....+.++++|+.||.|++||..+++++.++.+
T Consensus 166 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 245 (317)
T d1vyhc1 166 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 245 (317)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeC
Confidence 99999999999998888877765554321 1123456899999999999999999999999999
Q ss_pred CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 558 HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 558 h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
|...|.+++|+|+ +.+|++|+.||.|++||+.+++.
T Consensus 246 ~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~ 281 (317)
T d1vyhc1 246 HDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNKRC 281 (317)
T ss_dssp CSSCEEEEEECSS-SSCEEEEETTTEEEEECCTTSCC
T ss_pred CCCCEEEEEECCC-CCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999999 89999999999999999988763
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.98 E-value=2.9e-30 Score=253.21 Aligned_cols=246 Identities=18% Similarity=0.241 Sum_probs=202.3
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
...+.+.||..+|++++|+|++++|++|+.|+ +|++||+.+++....+...|...|++++|+|++. +++++.|+.++
T Consensus 3 ~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg--~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~ 79 (299)
T d1nr0a2 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEG--HINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLK 79 (299)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTS--CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEE
T ss_pred ccceEcCCCCCCcEEEEECCCCCEEEEEcCCC--eEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEE
Confidence 45788999999999999999999999999998 8999999999999888778899999999999986 55677899999
Q ss_pred EEEcCCCeee------eeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe
Q psy10566 418 QCDIEGQVLD------SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 418 iwd~~~~~~~------~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 491 (604)
+|+..+.... ......+.++++++++..++++ .++.+.+|+.... ........+.+++++|+++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~-~~~~i~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l~~g~ 155 (299)
T d1nr0a2 80 VVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAA-CYKHIAIYSHGKL---TEVPISYNSSCVALSNDKQFVAVGG 155 (299)
T ss_dssp EECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEE-ESSEEEEEETTEE---EEEECSSCEEEEEECTTSCEEEEEE
T ss_pred EeccCCcccccccccccccccccccccccccccccccc-ccccccccccccc---ccccccccccccccccccccccccc
Confidence 9998543221 1223368899999999876655 4568999995432 2223456788999999999999999
Q ss_pred cCCeEEEEecCCCceee-EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce---EEeeCCCCCeeEEEE
Q psy10566 492 STQGVHLWDLRDRILLR-KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI---ATLSGHTRTVSCVAW 567 (604)
Q Consensus 492 ~dg~I~lwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~---~~l~~h~~~V~~v~~ 567 (604)
.|+.|++||+++++... ....|... +.++.++|+++++++++.||.|++||+.++..+ ..+.+|...|++++|
T Consensus 156 ~dg~i~~~d~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 232 (299)
T d1nr0a2 156 QDSKVHVYKLSGASVSEVKTIVHPAE---ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW 232 (299)
T ss_dssp TTSEEEEEEEETTEEEEEEEEECSSC---EEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEE
T ss_pred cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999998876544 23345553 444566799999999999999999999877554 355679999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 568 NPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 568 sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+|+ +.+|++|+.||.|++||+.++..
T Consensus 233 s~~-~~~l~sgs~dg~i~iwd~~~~~~ 258 (299)
T d1nr0a2 233 SPD-NVRLATGSLDNSVIVWNMNKPSD 258 (299)
T ss_dssp CTT-SSEEEEEETTSCEEEEETTCTTS
T ss_pred ccc-ccceEEEcCCCEEEEEECCCCCc
Confidence 999 89999999999999999987653
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=3e-30 Score=261.91 Aligned_cols=239 Identities=16% Similarity=0.204 Sum_probs=196.1
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE--EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL--RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 423 (604)
+..+|+|++|+||+++|++++.++ .|++||..+++. +..+ .+|.++|.+++|+|++++|++|+.|++|++||++.
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~--~i~iw~~~~~~~~~~~~l-~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~ 82 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNH--EVHIYEKSGNKWVQVHEL-KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 82 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSS--EEEEEEEETTEEEEEEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred CCCCeEEEEECCCCCEEEEEeCCC--EEEEEECCCCCEEEEEEe-cCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecc
Confidence 357899999999999999999998 899999988763 3334 37899999999999999999999999999999964
Q ss_pred Ce---eeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc-----cccCCCCeeEEEECCCCCEEEEEecC
Q psy10566 424 QV---LDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN-----LLQEDHPVMSFTIDATDRLALLNVST 493 (604)
Q Consensus 424 ~~---~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~~~~~d 493 (604)
.. ...+.++ .+.++.|+|+++.+++++.++.|++|++....... ...+...|.+++|+|++.++++++.|
T Consensus 83 ~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D 162 (371)
T d1k8kc_ 83 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 162 (371)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccC
Confidence 33 2223333 69999999999999999999999999987754322 22357789999999999999999999
Q ss_pred CeEEEEecCCCc------------------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 494 QGVHLWDLRDRI------------------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 494 g~I~lwd~~~~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
+.|++||..... .+....+|... +..+.++|++++|++++.||.|++||+.+++.+..+
T Consensus 163 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~ 239 (371)
T d1k8kc_ 163 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW---VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 239 (371)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC---EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred cEEEEEeeccCccccccccccccccccceeeeeeccCccCc---EEEEEeecccccccccccCCcceEEeeecccceeee
Confidence 999999986532 23333444443 444566799999999999999999999999999999
Q ss_pred eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 556 SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 556 ~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
..|..+|++++|+|+ +.+|++|+ |+.+++|..+..
T Consensus 240 ~~~~~~v~s~~fs~d-~~~la~g~-d~~~~~~~~~~~ 274 (371)
T d1k8kc_ 240 ASETLPLLAVTFITE-SSLVAAGH-DCFPVLFTYDSA 274 (371)
T ss_dssp ECSSCCEEEEEEEET-TEEEEEET-TSSCEEEEEETT
T ss_pred ecccccceeeeecCC-CCEEEEEc-CCceEEEEeeCC
Confidence 999999999999998 77777654 777777765443
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.6e-29 Score=251.62 Aligned_cols=253 Identities=14% Similarity=0.144 Sum_probs=198.4
Q ss_pred ccceeecccCC-CcEEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCc----eeEeeEEeccCCCCeeEEEECCCCCeEE
Q psy10566 291 CETTQVLNDHC-DEVWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTF----TCQHRKTLEGHTLGVAYLAWSPDSSHLL 363 (604)
Q Consensus 291 ~~~~~~l~~H~-~~V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~----~~~~~~~l~~h~~~V~~l~~spd~~~l~ 363 (604)
......+.+|. ..|++++|+| +|.+||+|+.||+|+|||+..... .......+..|..+|.+++|+|++++++
T Consensus 52 ~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~ 131 (325)
T d1pgua1 52 VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 131 (325)
T ss_dssp SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccc
Confidence 44566778885 6899999998 567999999999999999862211 1222344567899999999999999999
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcC-CCeeeeeec-----eeEEE
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIE-GQVLDSWEG-----VRVNC 436 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~-~~~~~~~~~-----~~v~~ 436 (604)
+++.+....+.+|+.++++.+..+. .|...|.+++|+|++.. +++++.|+.+++||.. .+....... ..|.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~ 210 (325)
T d1pgua1 132 VVGEGRDNFGVFISWDSGNSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 210 (325)
T ss_dssp EEECCSSCSEEEEETTTCCEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eeeccccceEEEEeecccccceeee-ecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEE
Confidence 9887654579999999999888776 68889999999998875 6789999999999985 343333322 25999
Q ss_pred EEEcCC-CCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEEC---CCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 437 LWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTID---ATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 437 l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s---~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
++|+|+ +..+++++.|+.|++||+++.+....+. +..++.++.|+ |++++|++++.|+.|++||++++++++.+.
T Consensus 211 v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~ 290 (325)
T d1pgua1 211 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT 290 (325)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEE
Confidence 999996 6889999999999999999887655544 45555544444 689999999999999999999999999887
Q ss_pred ccccce--EEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 512 GVTQGQ--FTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 512 ~~~~~~--~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
.+.... ..+.+. + +.+.+|++|+.||.|+|||+
T Consensus 291 ~~~~~~~~~~~~~~-~-~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 291 LDKQQLGNQQVGVV-A-TGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp CCTTCGGGCEEEEE-E-EETTEEEEEETTSCEEEEET
T ss_pred ecCCcccCeEEEEE-E-CCCCEEEEEECCCEEEEEEC
Confidence 665432 233222 2 33458899999999999996
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=7.9e-28 Score=239.14 Aligned_cols=249 Identities=17% Similarity=0.319 Sum_probs=210.9
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
+..++|.||.++|++++|+|++++|++|+.|+ +|++||+.+++.+..+. .|...|.+++|+|++.++++|+.|+.+.
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg--~v~iWd~~~~~~~~~~~-~~~~~v~~v~~~~~~~~l~~~~~d~~i~ 122 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTT--EEEEEETTTTEEEEEEE-CSCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred eeeEEECCCCCCEEEEEECCCCCEEEEEECCC--ceeeeecccceeEEEEe-cccccEEeeEeeccceeeeeecccceee
Confidence 34578999999999999999999999999999 89999999999888876 6788999999999999999999999999
Q ss_pred EEEcCC-----Ceeeeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEE
Q psy10566 418 QCDIEG-----QVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 418 iwd~~~-----~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~ 490 (604)
+|+... .....+.++ ..........+..+.....+.....++........ .......+....+.+.+.+++++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (340)
T d1tbga_ 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEe
Confidence 999842 333444444 23444445556778888889999998887654433 33457788999999999999999
Q ss_pred ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee--CCCCCeeEEEEc
Q psy10566 491 VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS--GHTRTVSCVAWN 568 (604)
Q Consensus 491 ~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~--~h~~~V~~v~~s 568 (604)
+.|+.|++||+++++++..+.+|...+.. +.++|++++|++|+.||.|++||+.....+..+. .|...|++++|+
T Consensus 203 ~~d~~v~i~d~~~~~~~~~~~~h~~~i~~---v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
T d1tbga_ 203 ACDASAKLWDVREGMCRQTFTGHESDINA---ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp ETTTEEEEEETTTTEEEEEECCCSSCEEE---EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred ecCceEEEEECCCCcEEEEEeCCCCCeEE---EEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEEC
Confidence 99999999999999999999998885444 4557999999999999999999999988877664 456789999999
Q ss_pred CCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|+ +.+|++|+.||.|++||+.+++
T Consensus 280 ~~-~~~l~~g~~dg~i~iwd~~~~~ 303 (340)
T d1tbga_ 280 KS-GRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp SS-SCEEEEEETTSCEEEEETTTCC
T ss_pred CC-CCEEEEEECCCEEEEEECCCCc
Confidence 99 8999999999999999998775
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=3.9e-29 Score=251.19 Aligned_cols=275 Identities=13% Similarity=0.073 Sum_probs=212.8
Q ss_pred EEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE
Q psy10566 307 CKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV 385 (604)
Q Consensus 307 v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~ 385 (604)
-.||| ||+++|+++ +|.|++||+. ..... .+ +|...|.+++|+|||+.|++++.++...|++||..+++...
T Consensus 8 ~~fSP~dG~~~a~~~-~g~v~v~d~~----~~~~~-~~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 8 EDFSPLDGDLIAFVS-RGQAFIQDVS----GTYVL-KV-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK 80 (360)
T ss_dssp EEEEECGGGCEEEEE-TTEEEEECTT----SSBEE-EC-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ccccCCCCCEEEEEE-CCeEEEEECC----CCcEE-Ec-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE
Confidence 57999 999999987 5799999997 22222 23 69999999999999999998887654579999999987665
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe----------CC
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD----------TH 452 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~----------~d 452 (604)
.. .|...|.+++|+|+++++++++.++.+++|++. ++....+..+ .+.+++|+|+|++++.+. .+
T Consensus 81 ~~--~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~ 158 (360)
T d1k32a3 81 FE--ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 158 (360)
T ss_dssp CC--CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred ee--CCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccc
Confidence 43 577889999999999999999999999999995 4544555444 678899999999998654 34
Q ss_pred CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce-------eeEee--------------
Q psy10566 453 HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL-------LRKFQ-------------- 511 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~-------~~~~~-------------- 511 (604)
+.+++||..+.+......+...+..++|+|+|+.|++++.++.+.+||...... ...+.
T Consensus 159 ~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 238 (360)
T d1k32a3 159 QAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR 238 (360)
T ss_dssp EEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCG
T ss_pred cceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCC
Confidence 569999999988877788888899999999999999999999999998654311 00000
Q ss_pred --------------------------------ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC
Q psy10566 512 --------------------------------GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT 559 (604)
Q Consensus 512 --------------------------------~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~ 559 (604)
.+......+.....++.+.++++++.++.|++||+.+++.. .|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~ 314 (360)
T d1k32a3 239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVK 314 (360)
T ss_dssp GGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EEE
T ss_pred cCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----Eec
Confidence 00011111222222333345667778899999999987642 344
Q ss_pred CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 560 RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 560 ~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
+.|.+++|+|| ++.|++++.||.|++|+++.++..
T Consensus 315 ~~v~~~~~SpD-G~~l~~~~~Dg~i~v~d~~~~~~~ 349 (360)
T d1k32a3 315 NNLTDLRLSAD-RKTVMVRKDDGKIYTFPLEKPEDE 349 (360)
T ss_dssp EEEEEEEECTT-SCEEEEEETTSCEEEEESSCTTSC
T ss_pred CCcCEEEECCC-CCEEEEEECCCeEEEEECCCCCcc
Confidence 56999999999 899999999999999999988754
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=3.8e-28 Score=248.26 Aligned_cols=262 Identities=13% Similarity=0.163 Sum_probs=191.1
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce--eEeeEEeccCCCCeeEEEE------CC-CCCeEE
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT--CQHRKTLEGHTLGVAYLAW------SP-DSSHLL 363 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~--~~~~~~l~~h~~~V~~l~~------sp-d~~~l~ 363 (604)
.....++|.+.|+++++++ ++|+|||.|++|+|||....... .........|...+..+.. ++ ++..++
T Consensus 6 ~~~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (393)
T d1sq9a_ 6 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 83 (393)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred eeecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEE
Confidence 4466789999999999875 68999999999999997632211 1122233335444433322 22 234677
Q ss_pred EEeCCCceEEEEEECCCceE----EE-Eec----CCCCCCeEEEEEecC-----CCEEEEEecCCeEEEEEcCCC-----
Q psy10566 364 VVGPEDCHELWVWNIETELL----RV-KLN----HSPEDSLTSCSWNRD-----GTKFVCGGIRGQFYQCDIEGQ----- 424 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~----~~-~~~----~~~~~~v~~~~~~~~-----~~~l~s~~~dg~i~iwd~~~~----- 424 (604)
+++.|+ .|++|++..... .. ... ..+...+..++|.++ +.++++++.||.+.+|++...
T Consensus 84 s~~~dg--~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~ 161 (393)
T d1sq9a_ 84 TTSFSG--DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 161 (393)
T ss_dssp EEETTS--CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEeCCC--cEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccc
Confidence 888888 899998754321 11 111 123345778888775 468899999999999997311
Q ss_pred -------eeeeee---------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc-------cccCCCCeeEEEEC
Q psy10566 425 -------VLDSWE---------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN-------LLQEDHPVMSFTID 481 (604)
Q Consensus 425 -------~~~~~~---------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~-------~~~~~~~i~~~~~s 481 (604)
...... ...+.+++|+|++ ++++|+.|+.|++||+.+.+... ...|..+|.+++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s 240 (393)
T d1sq9a_ 162 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240 (393)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred eeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccc
Confidence 000000 1147889999998 88999999999999998865432 23467899999999
Q ss_pred CCCCEEEEEecCC---eEEEEecCCCceeeEee-------------ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 482 ATDRLALLNVSTQ---GVHLWDLRDRILLRKFQ-------------GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 482 ~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
|++++|++++.|+ .|++||+++++.+..+. +|... |.++.++|++++|++|+.|++|+|||
T Consensus 241 pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~---V~~l~fspd~~~l~S~s~D~~v~vWd 317 (393)
T d1sq9a_ 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW---VMSLSFNDSGETLCSAGWDGKLRFWD 317 (393)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC---EEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred cccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCc---eeeeccCCCCCeeEEECCCCEEEEEE
Confidence 9999999999987 49999999998877764 56664 45566689999999999999999999
Q ss_pred CCCCcceEEeeCCCCCe
Q psy10566 546 VKRELPIATLSGHTRTV 562 (604)
Q Consensus 546 ~~~~~~~~~l~~h~~~V 562 (604)
+++++++.++.+|.+.|
T Consensus 318 ~~~g~~~~~l~gH~~~v 334 (393)
T d1sq9a_ 318 VKTKERITTLNMHCDDI 334 (393)
T ss_dssp TTTTEEEEEEECCGGGC
T ss_pred CCCCCEEEEECCcCCcc
Confidence 99999999999997554
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=7.1e-26 Score=224.07 Aligned_cols=253 Identities=14% Similarity=0.170 Sum_probs=189.1
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE--ecCCCCCCeEEEEEecCC-CEEEEEecCC
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK--LNHSPEDSLTSCSWNRDG-TKFVCGGIRG 414 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~s~~~dg 414 (604)
+.+....+|.+.|++|+|+|++++|++++.|+ +|++||+.++..... ....|..+|.+++|+|++ ..+++|+.||
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg--~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~ 79 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDG--SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTS--EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCC--eEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccccc
Confidence 45667789999999999999999999999998 899999876543222 222578899999999864 5899999999
Q ss_pred eEEEEEcCCC-eeeeeec---eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-------cCCCCeeEEEECCC
Q psy10566 415 QFYQCDIEGQ-VLDSWEG---VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-------QEDHPVMSFTIDAT 483 (604)
Q Consensus 415 ~i~iwd~~~~-~~~~~~~---~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-------~~~~~i~~~~~s~~ 483 (604)
.|++|++... ....... .......+.+++..+++++.++.+++||++........ ........+.+.+.
T Consensus 80 ~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (342)
T d1yfqa_ 80 EILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN 159 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC
T ss_pred ceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeecc
Confidence 9999999532 2222222 13455667778899999999999999998764332221 12334556778888
Q ss_pred CCEEEEEecCCeEEEEecCCCceeeEeecccc-ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce------E---
Q psy10566 484 DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI------A--- 553 (604)
Q Consensus 484 ~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~------~--- 553 (604)
+..+++++.|+.|++||+.............. .........++.++..+++++.||.+.+|+....... .
T Consensus 160 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~ 239 (342)
T d1yfqa_ 160 SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred CCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceee
Confidence 99999999999999999987765443332211 1112233455677889999999999999998643211 1
Q ss_pred ------EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 554 ------TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 554 ------~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...+|...|++++|+|+ +.+||||+.||+|++||+++++
T Consensus 240 ~~~~~~~~~~~~~~v~~l~~sp~-~~~lasg~~Dg~v~vWD~~~~~ 284 (342)
T d1yfqa_ 240 CHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTTE
T ss_pred eeeeccCCCcccccceeEEecCC-ccEEEEECCCCEEEEEECCCCc
Confidence 12356678999999999 7899999999999999998875
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=7.1e-25 Score=223.67 Aligned_cols=243 Identities=14% Similarity=0.150 Sum_probs=182.0
Q ss_pred eEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-------EEEEecCCCCCCeEEEEEe---c----CCC
Q psy10566 340 RKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-------LRVKLNHSPEDSLTSCSWN---R----DGT 405 (604)
Q Consensus 340 ~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-------~~~~~~~~~~~~v~~~~~~---~----~~~ 405 (604)
....++|...|.++++++ +++++++.|+ +|++||..+.. ..... .+...+..+... + ++.
T Consensus 7 ~~~~~~H~~~I~~v~~~~--~~l~S~S~D~--~iriWd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 80 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACN--SFTVSCSGDG--YLKVWDNKLLDNENPKDKSYSHF--VHKSGLHHVDVLQAIERDAFELC 80 (393)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTS--EEEEEESBCCTTCCGGGGEEEEE--CCTTCEEEEEEEEEEETTTEEEE
T ss_pred eecCCcccCccEEEEEeC--CEEEEEECCC--eEEEEECCCCCCCcccceeEeee--eccCCceEeeeEeeeccCCCCCc
Confidence 456678999999999875 5899999998 89999976543 12221 233333322221 1 335
Q ss_pred EEEEEecCCeEEEEEcC-C---Ceeeee---------eceeEEEEEEcCC-----CCEEEEEeCCCeEEEEEcCCCccc-
Q psy10566 406 KFVCGGIRGQFYQCDIE-G---QVLDSW---------EGVRVNCLWCRSD-----GKSVLAADTHHRIRTYNFEHLTDS- 466 (604)
Q Consensus 406 ~l~s~~~dg~i~iwd~~-~---~~~~~~---------~~~~v~~l~~s~~-----g~~l~~~~~dg~I~i~d~~~~~~~- 466 (604)
.+++++.||.|++|++. . ...... ..+.+..+++.++ +.++++++.||.+++|++......
T Consensus 81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~ 160 (393)
T d1sq9a_ 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160 (393)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccc
Confidence 67899999999999973 1 111111 1124666666665 467899999999999998542110
Q ss_pred ------------------ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee------ccccceEEEEe
Q psy10566 467 ------------------NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ------GVTQGQFTIHS 522 (604)
Q Consensus 467 ------------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~------~~~~~~~~i~~ 522 (604)
....+...+.+++|+|++ ++++|+.|++|++||+.+++++..+. +|.. .|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~---~V~~ 236 (393)
T d1sq9a_ 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN---SIRS 236 (393)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCC---CEEE
T ss_pred ceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccc---eEEE
Confidence 111234568899999997 88999999999999999998876655 3444 4556
Q ss_pred eeCCCCCcEEEEEeCCCc---EEEEeCCCCcceEEee-------------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 523 CFGGANQDFVASGSEDGK---VYIWHVKRELPIATLS-------------GHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~---I~iwd~~~~~~~~~l~-------------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
+.++|+|++|++|+.|++ |++||+.+++.+..+. +|.+.|++++|+|+ +.+|+|||.|++|+|
T Consensus 237 l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd-~~~l~S~s~D~~v~v 315 (393)
T d1sq9a_ 237 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRF 315 (393)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEE
T ss_pred cccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCC-CCeeEEECCCCEEEE
Confidence 667899999999999874 9999999998888774 79999999999999 899999999999999
Q ss_pred ECCCCCC
Q psy10566 587 WGPHLNT 593 (604)
Q Consensus 587 W~~~~~~ 593 (604)
||+.+++
T Consensus 316 Wd~~~g~ 322 (393)
T d1sq9a_ 316 WDVKTKE 322 (393)
T ss_dssp EETTTTE
T ss_pred EECCCCC
Confidence 9998875
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.3e-24 Score=215.31 Aligned_cols=243 Identities=19% Similarity=0.229 Sum_probs=197.1
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
..+....++||.+.|.+ +++++|++|++|+.|+ +|++||+.+++++..+. +|...|.+++|+|+ ++++|+.|+.
T Consensus 5 ~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg--~i~vWd~~~~~~~~~~~-~h~~~V~~v~~~~~--~l~s~s~D~~ 78 (342)
T d2ovrb2 5 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDN--TLKVWSAVTGKCLRTLV-GHTGGVWSSQMRDN--IIISGSTDRT 78 (342)
T ss_dssp CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTS--CEEEEETTTCCEEEECC-CCSSCEEEEEEETT--EEEEEETTSC
T ss_pred CCCcCEEECCcCCceEE-EEEECCCEEEEEeCCC--eEEEEECCCCCEEEEEe-CCCCCEEEEEeCCC--ccccceeccc
Confidence 45667889999999865 4677899999999998 89999999999988876 78899999999874 9999999999
Q ss_pred EEEEEcCCCeeeeee-ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC
Q psy10566 416 FYQCDIEGQVLDSWE-GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 416 i~iwd~~~~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 494 (604)
+++|+.......... ...............+..+..|+.+.+|+..+.............. ....+....+++++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ 157 (342)
T d2ovrb2 79 LKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV-RCVQYDGRRVVSGAYDF 157 (342)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCE-EEEEECSSCEEEEETTS
T ss_pred ccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccc-eeeccccceeeeecCCC
Confidence 999999654433322 2222222333445678889999999999999877655554433333 33445677889999999
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
.|++||......+..+.+|....... .+++.++++|+.||.|++||+..++++..+.+|...|.++++++ .+
T Consensus 158 ~i~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~---~~ 229 (342)
T d2ovrb2 158 MVKVWDPETETCLHTLQGHTNRVYSL-----QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD---NI 229 (342)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEE-----EECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET---TE
T ss_pred eEEEeecccceeeEEEcCcccccccc-----cCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC---CE
Confidence 99999999999999998887654332 35788999999999999999999999999999999999998875 58
Q ss_pred EEEEeCCCcEEEECCCCCC
Q psy10566 575 IASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~~ 593 (604)
|++++.||.|++|++...+
T Consensus 230 l~s~s~d~~i~iwd~~~~~ 248 (342)
T d2ovrb2 230 LVSGNADSTVKIWDIKTGQ 248 (342)
T ss_dssp EEEEETTSCEEEEETTTCC
T ss_pred EEEEcCCCEEEEEeccccc
Confidence 9999999999999998765
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=8.8e-24 Score=204.28 Aligned_cols=238 Identities=18% Similarity=0.317 Sum_probs=192.9
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
+.+.....|...|+|++| |+++|++|+.|+ +|++||+.+++++..+. +|...|++++| ++++|++|+.|+.|+
T Consensus 6 ~~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg--~i~vWd~~~~~~~~~l~-~H~~~V~~v~~--~~~~l~s~s~D~~i~ 78 (293)
T d1p22a2 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDN--TIKIWDKNTLECKRILT-GHTGSVLCLQY--DERVIITGSSDSTVR 78 (293)
T ss_dssp CCEECCCSSCCCEEEEEC--CSSEEEEEESSS--CEEEEESSSCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred EEEeccCCCCCCEEEEEE--cCCEEEEEeCCC--eEEEEECCCCcEEEEEe-cCCCCEeeeec--ccceeeccccccccc
Confidence 345556678899998765 789999999999 89999999999998886 78899999887 678999999999999
Q ss_pred EEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc----ccCCCCeeEEEECCCCCEEEEEec
Q psy10566 418 QCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL----LQEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 418 iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~----~~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
+|++. +...............+.+....++++..++.+.+||......... ..+...+..+.+. ...+++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~ 156 (293)
T d1p22a2 79 VWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASG 156 (293)
T ss_dssp EEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEET
T ss_pred ccccccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccC
Confidence 99995 4444444444444556667778899999999999999987654322 2345566666554 567889999
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH 572 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~ 572 (604)
|+.|++||+++++.+..+.++...+..+ ++++.++++++.||.|++||+++.+.+..+.+|...|..+. ++ .
T Consensus 157 d~~i~~~d~~~~~~~~~~~~~~~~v~~~-----~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~-~ 228 (293)
T d1p22a2 157 DRTIKVWNTSTCEFVRTLNGHKRGIACL-----QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR--FD-N 228 (293)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEE-----EEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE--CC-S
T ss_pred CCceeeecCCCCcEEEEEcccccccccc-----cCCCCeEEEecCCCEEEEEecccceeeeeecccceeeeecc--cc-c
Confidence 9999999999999999998887754433 24567999999999999999999999999999998887654 45 6
Q ss_pred cEEEEEeCCCcEEEECCCCC
Q psy10566 573 QMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+|++++.||.|++||+...
T Consensus 229 ~~l~sg~~dg~i~iwd~~~~ 248 (293)
T d1p22a2 229 KRIVSGAYDGKIKVWDLVAA 248 (293)
T ss_dssp SEEEEEETTSCEEEEEHHHH
T ss_pred eEEEEEcCCCEEEEEECCCC
Confidence 79999999999999987543
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=4e-24 Score=207.70 Aligned_cols=235 Identities=12% Similarity=0.187 Sum_probs=186.1
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
..++++++.+|..+|++++|+| |++|+.|+ +|++||+.++. ..|...|.+++|+++ ..+++++.|++
T Consensus 2 ~~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg--~v~~Wd~~~~~------~~h~~~V~~~~~~~~-~~~~s~s~D~~ 68 (287)
T d1pgua2 2 HDEVLKTISGHNKGITALTVNP----LISGSYDG--RIMEWSSSSMH------QDHSNLIVSLDNSKA-QEYSSISWDDT 68 (287)
T ss_dssp EEEEEEEECCCSSCEEEEETTT----TEEEETTS--CEEETTTTEEE------CCCCSCEEEEECCST-TCCEEEETTTE
T ss_pred CcceeEEECCCCCceEEEEECc----EEEEeCCC--eEEEEECCCCC------CCCCCCEEEEEecCC-CeEEEEeeccc
Confidence 4567899999999999999997 89999998 89999998653 368889999999865 56799999999
Q ss_pred EEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC-
Q psy10566 416 FYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ- 494 (604)
Q Consensus 416 i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg- 494 (604)
+++|++.... ....+.++.+.+++..++++ .++.+.+|+..+...........++ .++++++..+++++.++
T Consensus 69 v~~w~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~ 141 (287)
T d1pgua2 69 LKVNGITKHE----FGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVRLNSPG--SAVSLSQNYVAVGLEEGN 141 (287)
T ss_dssp EEETTEEEEE----CSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEECSSCE--EEEEECSSEEEEEETTTS
T ss_pred cccccccccc----cccceeeeeeccCCceEEEe-ecccceeeeccceeeeeecccccee--eeeeccCcceeeeccccc
Confidence 9999874321 12356778888888766654 5667889998887766666555554 45567788888888875
Q ss_pred eEEEEecCCCceeeEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE-EeeCCCCCeeEEEEcCCC-
Q psy10566 495 GVHLWDLRDRILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA-TLSGHTRTVSCVAWNPVY- 571 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~-~l~~h~~~V~~v~~sp~~- 571 (604)
.+++|++........+.. +.. .+.++.++|++.+|++|+.||.|++||+.+++... .+.+|...|++++|+|.+
T Consensus 142 ~v~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 218 (287)
T d1pgua2 142 TIQVFKLSDLEVSFDLKTPLRA---KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 218 (287)
T ss_dssp CEEEEETTEEEEEEECSSCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-
T ss_pred eeeeeeccccceeeeeeeccCC---ceeEEEeccCccccccccccccccceeecccccccccccccccccceeeeccccc
Confidence 699999987666555543 333 34455668999999999999999999999887655 467899999999999852
Q ss_pred --------CcEEEEEeCCCcEEEECCCCCC
Q psy10566 572 --------HQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 572 --------~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|+||+.|++|+||++..+.
T Consensus 219 ~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~ 248 (287)
T d1pgua2 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPM 248 (287)
T ss_dssp -----CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred ccccccCCCCeeEeecCCCeEEEEECCCCC
Confidence 4689999999999999997644
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.92 E-value=1.1e-21 Score=191.04 Aligned_cols=264 Identities=11% Similarity=0.047 Sum_probs=204.4
Q ss_pred EEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEE-eCCCceEEEEEECCCceEEEEecCCCCCC
Q psy10566 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV-GPEDCHELWVWNIETELLRVKLNHSPEDS 394 (604)
Q Consensus 316 lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~-~~d~~~~i~vwd~~~~~~~~~~~~~~~~~ 394 (604)
.++++.|++|.|||+. +.+.+.++... ..+..++|+|||++|+++ +.++ .|.+||+.+++.+..+... ..
T Consensus 5 yV~~~~~~~v~v~D~~----t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~--~i~v~d~~t~~~~~~~~~~--~~ 75 (301)
T d1l0qa2 5 YIANSESDNISVIDVT----SNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSN--DVSIIDTATNNVIATVPAG--SS 75 (301)
T ss_dssp EEEETTTTEEEEEETT----TTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGT--EEEEEETTTTEEEEEEECS--SS
T ss_pred EEEECCCCEEEEEECC----CCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCC--EEEEEECCCCceeeeeecc--cc
Confidence 3466789999999998 45566666643 457899999999988654 4555 8999999999998887632 45
Q ss_pred eEEEEEecCCCEEEE-EecCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCccccccc
Q psy10566 395 LTSCSWNRDGTKFVC-GGIRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDGKSVLA-ADTHHRIRTYNFEHLTDSNLLQ 470 (604)
Q Consensus 395 v~~~~~~~~~~~l~s-~~~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g~~l~~-~~~dg~I~i~d~~~~~~~~~~~ 470 (604)
+..++|++++..+++ +..++.+.+|+.. ++....+... ...++.++|++..++. +..++.+.+|+..+........
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (301)
T d1l0qa2 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (301)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccccccccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc
Confidence 789999999987665 4566789999995 4455555443 5788999999998765 4557889999999988887777
Q ss_pred CCCCeeEEEECCCCCEEEEEecC-CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC---CCcEEEEeC
Q psy10566 471 EDHPVMSFTIDATDRLALLNVST-QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE---DGKVYIWHV 546 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~~~d-g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~---dg~I~iwd~ 546 (604)
....+..+.++|++..++++..+ +.+.+|+.........+..+.. .....++++++.++.++. ++.|++||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~ 231 (301)
T d1l0qa2 156 VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAA----PSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (301)
T ss_dssp CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSE----EEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred cCCCceEEEeeccccceeeecccccccccccccceeeeecccccCC----cceeeccccccccccccccceeeeeeeeec
Confidence 77888999999999998888765 5677888877777666655433 222344578887765543 468999999
Q ss_pred CCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 547 KRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 547 ~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+++.+..+..+ ..+.+++|+|++..++++++.|++|++||+++++
T Consensus 232 ~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~ 277 (301)
T d1l0qa2 232 GTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277 (301)
T ss_dssp TTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Confidence 999998888754 4689999999944456788899999999998875
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.91 E-value=3.8e-23 Score=206.97 Aligned_cols=249 Identities=14% Similarity=0.071 Sum_probs=188.1
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCC--eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDT--TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg--~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
+|...|.+++|||||++|++++.+. .|++||.. .. ....+..|...|.+++|+|++++|++++.++ .+++|
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~----~~-~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~--~~~~~ 112 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYR----TG-KAEKFEENLGNVFAMGVDRNGKFAVVANDRF--EIMTV 112 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETT----TC-CEEECCCCCCSEEEEEECTTSSEEEEEETTS--EEEEE
T ss_pred cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECC----CC-cEEEeeCCCceEEeeeecccccccceecccc--ccccc
Confidence 6999999999999999998876553 79999987 22 2456778999999999999999999999998 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe----------cCCeEEEEEcCCCeeeeeec--eeEEEEEEcCCCC
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG----------IRGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGK 444 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~--~~v~~l~~s~~g~ 444 (604)
++.++.....+. .+...+.+++|+|+|++|+.+. .++.+++||+.+........ ..+..+.++|+|+
T Consensus 113 ~~~~~~~~~~~~-~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~ 191 (360)
T d1k32a3 113 DLETGKPTVIER-SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSK 191 (360)
T ss_dssp ETTTCCEEEEEE-CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSC
T ss_pred cccccceeeeee-cccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCC
Confidence 999998777665 5667889999999999998654 34578999997655444333 3688899999999
Q ss_pred EEEEEeCCCeEEEEEcCCCccc-------c-c-----------------------------------c-cCCCCeeEEEE
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDS-------N-L-----------------------------------L-QEDHPVMSFTI 480 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~-------~-~-----------------------------------~-~~~~~i~~~~~ 480 (604)
.+++++.++.+.+||....... . . . ........+..
T Consensus 192 ~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
T d1k32a3 192 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 271 (360)
T ss_dssp EEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEE
T ss_pred EEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeee
Confidence 9999999999999986432100 0 0 0 00112223333
Q ss_pred CCCCCE-------------EEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 481 DATDRL-------------ALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 481 s~~~~~-------------l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.+++.. ++.++.++.|++||+.+++... +.. .+..+.++|||++|++++.||.|++||++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~----~~~---~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~ 344 (360)
T d1k32a3 272 LESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE----VKN---NLTDLRLSADRKTVMVRKDDGKIYTFPLE 344 (360)
T ss_dssp CSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEE----EEE---EEEEEEECTTSCEEEEEETTSCEEEEESS
T ss_pred cCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEEE----ecC---CcCEEEECCCCCEEEEEECCCeEEEEECC
Confidence 333222 3344457789999998875432 222 34556778999999999999999999999
Q ss_pred CCcceEEeeCCCCCe
Q psy10566 548 RELPIATLSGHTRTV 562 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V 562 (604)
+++...++..+..++
T Consensus 345 ~~~~~~~~~~d~~~~ 359 (360)
T d1k32a3 345 KPEDERTVETDKRPL 359 (360)
T ss_dssp CTTSCEECCCCSSCE
T ss_pred CCCcceEEEeccccc
Confidence 999988887776654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=9.9e-23 Score=209.96 Aligned_cols=275 Identities=13% Similarity=0.048 Sum_probs=197.7
Q ss_pred EcCCCC--eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE-
Q psy10566 309 FSPDGL--KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV- 385 (604)
Q Consensus 309 fspdg~--~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~- 385 (604)
++.|.+ ++++.+.||+|+|||+. +.+.+.++..|. .+..++|||||+++++++.|+ +|++||+.+++...
T Consensus 26 ~~~d~~~~~~V~~~~dg~v~vwD~~----t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~--~v~vwd~~t~~~~~~ 98 (426)
T d1hzua2 26 NDLDLPNLFSVTLRDAGQIALVDGD----SKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDA--RIDMIDLWAKEPTKV 98 (426)
T ss_dssp SCCCGGGEEEEEETTTTEEEEEETT----TCSEEEEEECCS-SEEEEEECTTSCEEEEEETTS--EEEEEETTSSSCEEE
T ss_pred ccCCCCeEEEEEEcCCCEEEEEECC----CCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCC--CEEEEEccCCceeEE
Confidence 444433 56778899999999998 667788888774 589999999999999999988 89999999887433
Q ss_pred -Eec--CCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEEcC-CCeeeeeece-------------eEEEEEEcCCCCEEE
Q psy10566 386 -KLN--HSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIE-GQVLDSWEGV-------------RVNCLWCRSDGKSVL 447 (604)
Q Consensus 386 -~~~--~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~-~~~~~~~~~~-------------~v~~l~~s~~g~~l~ 447 (604)
.+. ..|...+.+++|+|||++++++ ..++.+.+||.. +........+ ....+..++++..++
T Consensus 99 ~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~ 178 (426)
T d1hzua2 99 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 178 (426)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEE
Confidence 222 2344456677788999987554 578999999995 4444444322 345667778877766
Q ss_pred EEeCC-CeEEEEEcCCCccc--ccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCceeeEe-------------
Q psy10566 448 AADTH-HRIRTYNFEHLTDS--NLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRILLRKF------------- 510 (604)
Q Consensus 448 ~~~~d-g~I~i~d~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~~~~~------------- 510 (604)
....+ +.+.+++....... ........+..+.++|++++++++.. +..+.+++..+++.+..+
T Consensus 179 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (426)
T d1hzua2 179 VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 258 (426)
T ss_dssp EEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEE
T ss_pred EecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceee
Confidence 65543 56667766654432 33456778899999999998887764 455777777765543322
Q ss_pred -----------------------------------------eccccceEEEEeeeCCCCCcEEEE-------EeCCCcEE
Q psy10566 511 -----------------------------------------QGVTQGQFTIHSCFGGANQDFVAS-------GSEDGKVY 542 (604)
Q Consensus 511 -----------------------------------------~~~~~~~~~i~~~~~~~~~~~l~s-------gs~dg~I~ 542 (604)
.+|.. .+..+.++|+++++++ ++.|++|+
T Consensus 259 ~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~---~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~ 335 (426)
T d1hzua2 259 FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG---GSLFIKTHPKSSHLYVDTTFNPDARISQSVA 335 (426)
T ss_dssp EEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSS---CCCCEECCTTCSEEEECCTTCSSHHHHTCEE
T ss_pred eecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCC---ceeEEEcCCCCceEEEeecCCCCcccCCEEE
Confidence 22222 1233567899999994 55688999
Q ss_pred EEeCCCCcceEEee---------CCCCCeeEEEEcCCCCcEEEEE----eCCCcEEEECCCCCC
Q psy10566 543 IWHVKRELPIATLS---------GHTRTVSCVAWNPVYHQMIASV----SDDCTVRIWGPHLNT 593 (604)
Q Consensus 543 iwd~~~~~~~~~l~---------~h~~~V~~v~~sp~~~~~l~s~----s~Dg~I~iW~~~~~~ 593 (604)
|||+.+++...++. .|...|.+++|||||..+++++ +.||.|+|||.++.+
T Consensus 336 vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k 399 (426)
T d1hzua2 336 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 399 (426)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred EEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence 99999998776652 4566799999999954455665 357899999999876
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=2.6e-21 Score=191.36 Aligned_cols=265 Identities=9% Similarity=-0.021 Sum_probs=188.8
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECCCCCeEEEE-eCCCceEEEEEECCCceEEEEecCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSPDSSHLLVV-GPEDCHELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~spd~~~l~s~-~~d~~~~i~vwd~~~~~~~~~~~~~ 390 (604)
+|+++++.|++|.|||+. +.+.+..+.. +...+.+++|+|||++++++ +.++ .|.+||+.+++.+..+...
T Consensus 2 ~~~vt~~~d~~v~v~D~~----s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~--~v~v~D~~t~~~~~~~~~~ 75 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTE----KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSE--SLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETT----TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTT--EEEEEETTTCCEEEEEECC
T ss_pred eEEEEEcCCCEEEEEECC----CCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCC--eEEEEECCCCcEEEEEecC
Confidence 589999999999999998 4556666654 44568899999999988654 4565 8999999999988776532
Q ss_pred C----CCCeEEEEEecCCCEEEEEec------------CCeEEEEEcC-CCeeeeeece-eEEEEEEcCCCCEEEEEeCC
Q psy10566 391 P----EDSLTSCSWNRDGTKFVCGGI------------RGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 391 ~----~~~v~~~~~~~~~~~l~s~~~------------dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~d 452 (604)
. ...+..++|+|++++++++.. +..+.+||.. +.....+... .+..++++|+|+++++++.+
T Consensus 76 ~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 155 (337)
T d1pbyb_ 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD 155 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS
T ss_pred CCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCC
Confidence 1 123557899999999988764 5678888885 4444444433 57789999999999998654
Q ss_pred CeEEEEEcCCCcccccccCCCCeeEEEECCC------------------------CCEEEEEecCCeEEEEecCCCceee
Q psy10566 453 HRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT------------------------DRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~------------------------~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
+.+||..+.................++++ ......+..++.+.+||..++....
T Consensus 156 --~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T d1pbyb_ 156 --LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp --EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred --cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEE
Confidence 67899877654433322111111111111 1111222334568899998887654
Q ss_pred Eee-ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 509 KFQ-GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 509 ~~~-~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
... .+... .....+++++.+++++ ++.|++||+.+++.+..+. +...+.+++|+|+ +.+|++++.||+|+||
T Consensus 234 ~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~d-G~~l~v~~~~~~i~v~ 306 (337)
T d1pbyb_ 234 REVRIMDVF---YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTD-GSTVWLGGALGDLAAY 306 (337)
T ss_dssp EEEEECSSC---EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTT-SCEEEEESBSSEEEEE
T ss_pred EEecCCCcc---eEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCC-CCEEEEEeCCCcEEEE
Confidence 433 33332 2223456888888766 5889999999999998886 5677899999999 7889999999999999
Q ss_pred CCCCCC
Q psy10566 588 GPHLNT 593 (604)
Q Consensus 588 ~~~~~~ 593 (604)
|..+.+
T Consensus 307 D~~t~~ 312 (337)
T d1pbyb_ 307 DAETLE 312 (337)
T ss_dssp ETTTCC
T ss_pred ECCCCc
Confidence 999876
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.88 E-value=7.1e-22 Score=196.23 Aligned_cols=272 Identities=13% Similarity=0.043 Sum_probs=191.0
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEe-CCCceEEEEEECCCceEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVG-PEDCHELWVWNIETELLR 384 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~-~d~~~~i~vwd~~~~~~~ 384 (604)
++|++++++|++++.|++|.|||+. +.+.+.++. .|...+.+++|+|||+++++++ .++ .|.+||+.+++..
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~----t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~--~v~~~d~~t~~~~ 75 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVA----SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG--DIYGIDLDTCKNT 75 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETT----TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTT--EEEEEETTTTEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECC----CCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCC--cEEEEeCccCeee
Confidence 4789999999999999999999998 556677766 3566789999999999986665 455 8999999999988
Q ss_pred EEecCCCC-----CCeEEEEEecCCCEEEEEe------------cCCeEEEEEcC-CCeeeeee----ceeEEEEEEcCC
Q psy10566 385 VKLNHSPE-----DSLTSCSWNRDGTKFVCGG------------IRGQFYQCDIE-GQVLDSWE----GVRVNCLWCRSD 442 (604)
Q Consensus 385 ~~~~~~~~-----~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~-~~~~~~~~----~~~v~~l~~s~~ 442 (604)
..+..... ..+..++|+|||+++++++ .++.+.+|+.. ++....+. +..+..+.++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (346)
T d1jmxb_ 76 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 155 (346)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred eeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCC
Confidence 76653322 2356799999999998876 36678888873 33222221 224555667777
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCE--------------------------EEEEecCCeE
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRL--------------------------ALLNVSTQGV 496 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~--------------------------l~~~~~dg~I 496 (604)
+..+++ ++.+.+|+..+......+........+.++|++.. +.++..++.+
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (346)
T d1jmxb_ 156 GSLYVA---GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 232 (346)
T ss_dssp SCEEEE---SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred CEEEEe---CCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceE
Confidence 765554 24588898877655544443333333334443332 2333445568
Q ss_pred EEEecCCCceeeEee-ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 497 HLWDLRDRILLRKFQ-GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
.+||+.++....... .+..... .+..++++.+++.+. ++.|++||..+++.+..+. +...+.+++|+|| +.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~D-G~~l 306 (346)
T d1jmxb_ 233 LSVDLKTGKTHTQEFADLTELYF---TGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKK-GDKL 306 (346)
T ss_dssp EEEETTTCCEEEEEEEECSSCEE---EEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSS-SSCE
T ss_pred EEEECCCCceEEEEeecccceeE---EEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc-CCCCEEEEEEcCC-CCEE
Confidence 888888876654433 3333222 233346666666665 4579999999999988876 4567999999999 7889
Q ss_pred EEEeCCCcEEEECCCCCC
Q psy10566 576 ASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~~~ 593 (604)
++++.||.|+|||+.+.+
T Consensus 307 ~v~~~d~~v~v~D~~t~~ 324 (346)
T d1jmxb_ 307 YLGGTFNDLAVFNPDTLE 324 (346)
T ss_dssp EEESBSSEEEEEETTTTE
T ss_pred EEEeCCCcEEEEECccCC
Confidence 999999999999999876
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=6.2e-22 Score=203.84 Aligned_cols=298 Identities=11% Similarity=-0.015 Sum_probs=196.1
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCcee-EeeEEeccCCCCeeEEEECCCCCeEE-EEeC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTC-QHRKTLEGHTLGVAYLAWSPDSSHLL-VVGP 367 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~-~~~~~l~~h~~~V~~l~~spd~~~l~-s~~~ 367 (604)
..+++..+..|. .+..++|||||+++++++.|++|++||+.+.+... ..+....+|.+.+.+..|+|||++|+ +++.
T Consensus 51 t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~ 129 (432)
T d1qksa2 51 TYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW 129 (432)
T ss_dssp TCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCC
Confidence 467788888774 69999999999999999999999999997332211 12333445667777788899999875 5555
Q ss_pred CCceEEEEEECCCceEEEEecC----------CCCCCeEEEEEecCCCEEE-EEecCCeEEEEEcC-CCeee--eee-ce
Q psy10566 368 EDCHELWVWNIETELLRVKLNH----------SPEDSLTSCSWNRDGTKFV-CGGIRGQFYQCDIE-GQVLD--SWE-GV 432 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~-~~~~~--~~~-~~ 432 (604)
++ +|++||..+++....+.. .+......+.++|++..++ +...++.|.+||.. .+... .+. +.
T Consensus 130 ~~--~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~ 207 (432)
T d1qksa2 130 PP--QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAER 207 (432)
T ss_dssp TT--EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCS
T ss_pred CC--eEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccC
Confidence 66 899999999988766542 2345567889999998765 55667899999984 34333 222 34
Q ss_pred eEEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCcccccccC------CCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCC
Q psy10566 433 RVNCLWCRSDGKSVLAADT-HHRIRTYNFEHLTDSNLLQE------DHPVMSFTIDATDRLALLNV-STQGVHLWDLRDR 504 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~ 504 (604)
.+..++|+|+|+++++++. ++.+.++|..+......... ........+...+....... .++.|.+|+....
T Consensus 208 ~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~ 287 (432)
T d1qksa2 208 FLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPE 287 (432)
T ss_dssp SEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred ccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccc
Confidence 6889999999998777765 45788999877654433221 22233333333333333332 2556666655332
Q ss_pred c-------eeeEeeccc----------cceEEE------------EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 505 I-------LLRKFQGVT----------QGQFTI------------HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 505 ~-------~~~~~~~~~----------~~~~~i------------~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
. ....+..+. ...... ..++. ||++.+++++.|+.+++|++.++..+
T Consensus 288 ~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l--- 363 (432)
T d1qksa2 288 GHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGI--- 363 (432)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTC---
T ss_pred cccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE-EechhhcccccCCceEeccccccccc---
Confidence 1 111111111 000000 01122 67888888889999999987655333
Q ss_pred eCCCCCeeEEEEcCCCCcEEEEEe----CCCcEEEECCCCCCC
Q psy10566 556 SGHTRTVSCVAWNPVYHQMIASVS----DDCTVRIWGPHLNTN 594 (604)
Q Consensus 556 ~~h~~~V~~v~~sp~~~~~l~s~s----~Dg~I~iW~~~~~~~ 594 (604)
..|...|.+++|+|||..+++|.. .+|.|+|||.++.+.
T Consensus 364 ~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~ 406 (432)
T d1qksa2 364 TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLEL 406 (432)
T ss_dssp CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred CCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceE
Confidence 357778999999999444445542 468899999998863
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.87 E-value=1.7e-19 Score=175.20 Aligned_cols=254 Identities=14% Similarity=0.082 Sum_probs=199.1
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.+.++++... +.+..++|+|||++| ++++.++.|++||+. +.+.+..+..+. .+..++|++++..+++++.++
T Consensus 22 ~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~----t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 95 (301)
T d1l0qa2 22 NKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS 95 (301)
T ss_dssp TEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECC----CCceeeeeeccc-ccccccccccccccccccccc
Confidence 3555666543 457899999999977 466688999999998 556677777665 468999999999887776655
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEE-EecCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCCCEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC-GGIRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDGKSV 446 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g~~l 446 (604)
..+.+|+..+++....+. +...+.++.|+|++..++. +..++.+.+|+.. +.....+... .+..+.+++++..+
T Consensus 96 -~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (301)
T d1l0qa2 96 -STLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKV 172 (301)
T ss_dssp -TEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEE
T ss_pred -ceeeecccccceeeeecc--ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccce
Confidence 389999999998888776 3456889999999998765 4557889999995 4555555443 57889999999988
Q ss_pred EEEeCC-CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 447 LAADTH-HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 447 ~~~~~d-g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
++++.+ +.+.+|+...............+..+++++++..++++..+ +.|++||+.+++.+..+..+.. +..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~----~~~ 248 (301)
T d1l0qa2 173 YVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD----PAG 248 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS----EEE
T ss_pred eeecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCCC----EEE
Confidence 887765 66778888777766666667778899999999998876544 6799999999998888765433 234
Q ss_pred eeCCCCCcEE-EEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 523 CFGGANQDFV-ASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 523 ~~~~~~~~~l-~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
+.++|+|++| ++++.|+.|++||+++++++.++..
T Consensus 249 va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v 284 (301)
T d1l0qa2 249 IAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV 284 (301)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence 5668999976 5777899999999999999988863
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=3.9e-20 Score=190.23 Aligned_cols=278 Identities=11% Similarity=0.003 Sum_probs=183.6
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCcee-EeeEEeccCCCCeeE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTC-QHRKTLEGHTLGVAY 352 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~-~~~~~l~~h~~~V~~ 352 (604)
+....+||.. ..+.+.++..|. .+..++|||||++|++++.|++|++||+.+..... ..+....+|...+.+
T Consensus 41 dg~v~vwD~~------t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s 113 (426)
T d1hzua2 41 AGQIALVDGD------SKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESS 113 (426)
T ss_dssp TTEEEEEETT------TCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEEC
T ss_pred CCEEEEEECC------CCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEe
Confidence 3455566643 356778888774 69999999999999999999999999998332211 122333456677788
Q ss_pred EEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC----------CCCCeEEEEEecCCCEEEEEecC-CeEEEEEc
Q psy10566 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS----------PEDSLTSCSWNRDGTKFVCGGIR-GQFYQCDI 421 (604)
Q Consensus 353 l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~ 421 (604)
++|+|||+++++++... ..+.+||..++......... +......+.+++++..++....+ +.+.+++.
T Consensus 114 ~~~spDG~~l~v~~~~~-~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~ 192 (426)
T d1hzua2 114 KFKGYEDRYTIAGAYWP-PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 192 (426)
T ss_dssp CSTTCTTTEEEEEEEES-SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred eeecCCCCEEEEeecCC-CeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEe
Confidence 89999999987666443 28999999998876655421 22334455566666655554433 44545544
Q ss_pred C-CCe--ee-eeeceeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCcc-------------------------------
Q psy10566 422 E-GQV--LD-SWEGVRVNCLWCRSDGKSVLAADT-HHRIRTYNFEHLTD------------------------------- 465 (604)
Q Consensus 422 ~-~~~--~~-~~~~~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~------------------------------- 465 (604)
. ... +. .-.+..+..+.++|++++++++.. +..+.+++..+...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (426)
T d1hzua2 193 KDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH 272 (426)
T ss_dssp SSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEEC
T ss_pred ccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEecc
Confidence 2 111 11 112335777888888887666653 33455555432211
Q ss_pred ------------------------cccccCCCCeeEEEECCCCCEEEE-------EecCCeEEEEecCCCceeeEeecc-
Q psy10566 466 ------------------------SNLLQEDHPVMSFTIDATDRLALL-------NVSTQGVHLWDLRDRILLRKFQGV- 513 (604)
Q Consensus 466 ------------------------~~~~~~~~~i~~~~~s~~~~~l~~-------~~~dg~I~lwd~~~~~~~~~~~~~- 513 (604)
..+..|...+..++|+|+++++++ +..+++|++||+.+++...++..+
T Consensus 273 ~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~ 352 (426)
T d1hzua2 273 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA 352 (426)
T ss_dssp TTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH
T ss_pred CCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccc
Confidence 011123556888999999999996 345788999999999877666432
Q ss_pred -----ccceEEEEeeeCCCCCcEEEEE-----eCCCcEEEEeCCCCcceEEeeCCC
Q psy10566 514 -----TQGQFTIHSCFGGANQDFVASG-----SEDGKVYIWHVKRELPIATLSGHT 559 (604)
Q Consensus 514 -----~~~~~~i~~~~~~~~~~~l~sg-----s~dg~I~iwd~~~~~~~~~l~~h~ 559 (604)
......+....|+|||++++.. +.+|.|+|||.++++....+.++.
T Consensus 353 ~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~ 408 (426)
T d1hzua2 353 EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 408 (426)
T ss_dssp HHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred hhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC
Confidence 1222234445678999977432 357899999999999999998775
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.81 E-value=2.6e-17 Score=165.19 Aligned_cols=289 Identities=9% Similarity=-0.052 Sum_probs=196.6
Q ss_pred cccCCCcEEEEEEcCCCCeEEEE-----ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC--
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATG-----SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-- 369 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasg-----s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-- 369 (604)
...|.+++.+++++|||+.++.. +.++.|.+||.. +.+.+..+..+..+ .++|+|||+++++++.+.
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~----tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~ 89 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAG----SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECC----CCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCc
Confidence 34588899999999999988764 234578889877 55666777766543 799999999999886432
Q ss_pred ------ceEEEEEECCCceEEEEecCCCCC------CeEEEEEecCCCEEEEEec--CCeEEEEEcCCCeeeeeeceeEE
Q psy10566 370 ------CHELWVWNIETELLRVKLNHSPED------SLTSCSWNRDGTKFVCGGI--RGQFYQCDIEGQVLDSWEGVRVN 435 (604)
Q Consensus 370 ------~~~i~vwd~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~v~ 435 (604)
.+.|.+||..+++....+...... ....+.|+++++.++.... ++.+.+|+.......... ....
T Consensus 90 ~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 168 (373)
T d2madh_ 90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL-SSPT 168 (373)
T ss_pred ccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe-ccce
Confidence 137999999999988776532211 1245789999987766543 467888887543322111 1356
Q ss_pred EEEEcCCCCEE-EEEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 436 CLWCRSDGKSV-LAADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 436 ~l~~s~~g~~l-~~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
++.++++|+.+ ++.+.|+.+.+|+........... .........+++++. ++..+.++.+.+|+..+....
T Consensus 169 ~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 247 (373)
T d2madh_ 169 CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred eEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEE
Confidence 78899998765 678889999999998765544322 112234455566554 445567888999998876433
Q ss_pred eEe--eccccceEE-------EEeeeCC----------CCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc
Q psy10566 508 RKF--QGVTQGQFT-------IHSCFGG----------ANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 508 ~~~--~~~~~~~~~-------i~~~~~~----------~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s 568 (604)
... ......... .....++ ..+..+++...++.|.+||..+++.+..+. +...+.+++|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~s 326 (373)
T d2madh_ 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVA 326 (373)
T ss_pred EEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEEC
Confidence 221 111111000 0111122 334455566777899999999999988876 66778999999
Q ss_pred CCCCc-EEEEEeCCCcEEEECCCCCCC
Q psy10566 569 PVYHQ-MIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 569 p~~~~-~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
||+.. ++++++.|++|++||+.+++.
T Consensus 327 pDG~~~l~vt~~~d~~v~v~D~~tg~~ 353 (373)
T d2madh_ 327 QDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence 99433 457899999999999999873
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.81 E-value=2.4e-18 Score=176.75 Aligned_cols=225 Identities=12% Similarity=0.041 Sum_probs=162.4
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE--EEEec--C
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL--RVKLN--H 389 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~--~ 389 (604)
-++++.+.||+|.|||.. +.+.+..+..|. .+..++|||||+++++++.|+ .+++||+.+++. ...+. .
T Consensus 33 ~~~v~~~d~g~v~v~D~~----t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg--~v~~~d~~t~~~~~~~~i~~~~ 105 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGS----TYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDG--KVNMIDLWMKEPTTVAEIKIGS 105 (432)
T ss_dssp EEEEEETTTTEEEEEETT----TCCEEEEEECSS-CEEEEEECTTSCEEEEEETTS--EEEEEETTSSSCCEEEEEECCS
T ss_pred EEEEEEcCCCEEEEEECC----CCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCC--CEEEEEeeCCCceEEEEEecCC
Confidence 356888999999999998 667788888774 699999999999999999988 899999988763 33333 2
Q ss_pred CCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcC-CCeeeeeece-------------eEEEEEEcCCCCEEE-EEeCCC
Q psy10566 390 SPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIE-GQVLDSWEGV-------------RVNCLWCRSDGKSVL-AADTHH 453 (604)
Q Consensus 390 ~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~-~~~~~~~~~~-------------~v~~l~~s~~g~~l~-~~~~dg 453 (604)
.+.+.+.+..|+|||+++ ++++.++.|.+||.. ++.+..+..+ +...+.++++|..++ +...++
T Consensus 106 ~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~ 185 (432)
T d1qksa2 106 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 185 (432)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCC
Confidence 334455666778899986 678889999999984 5665554432 466789999998764 556678
Q ss_pred eEEEEEcCCCcccc--cccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCceeeEeeccc-----cceEEEEeeeC
Q psy10566 454 RIRTYNFEHLTDSN--LLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRILLRKFQGVT-----QGQFTIHSCFG 525 (604)
Q Consensus 454 ~I~i~d~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~~~~~~~~~-----~~~~~i~~~~~ 525 (604)
.|.+||..+.+... .+.....+..++++|+|+++++++. ++.+.++|..+++.+..+.... ..... ...
T Consensus 186 ~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~---~~~ 262 (432)
T d1qksa2 186 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN---FVH 262 (432)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE---EEE
T ss_pred eEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccc---eec
Confidence 99999998765433 3455677889999999998877766 5579999999888776654321 11111 112
Q ss_pred CCCCcEEEEEe-CCCcEEEEeCCC
Q psy10566 526 GANQDFVASGS-EDGKVYIWHVKR 548 (604)
Q Consensus 526 ~~~~~~l~sgs-~dg~I~iwd~~~ 548 (604)
+..+...++.. .++.|.+|+...
T Consensus 263 ~~~g~~~~~~~lg~~~v~~~~~~~ 286 (432)
T d1qksa2 263 PTFGPVWATSHMGDDSVALIGTDP 286 (432)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCceecccccCCceEEeccccc
Confidence 23344444443 377888887654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=2.3e-17 Score=162.51 Aligned_cols=272 Identities=11% Similarity=0.071 Sum_probs=179.2
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEE--EEecCCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLR--VKLNHSP 391 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~--~~~~~~~ 391 (604)
.+++++.|++|+||+++... ....+..+ .|.+.|..++|+|||++|++++. ++ .|.+|++...... .......
T Consensus 6 v~v~~~~~~~I~v~~~~~~~-~l~~~~~~-~~~~~v~~la~spDG~~L~v~~~~d~--~i~~~~i~~~~~~~~~~~~~~~ 81 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEG-ALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEF--RVLAYRIAPDDGALTFAAESAL 81 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTS-CEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTT--EEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEECCCCCcEEEEEEcCCC-CeEEEEEE-cCCCCEeEEEEeCCCCEEEEEECCCC--eEEEEEEeCCCCcEEEeeeccc
Confidence 45777899999999997322 23333443 47788999999999999977665 55 8999998765322 1111123
Q ss_pred CCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCeeeee-----eceeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCc
Q psy10566 392 EDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIEGQVLDSW-----EGVRVNCLWCRSDGKSVLAADT-HHRIRTYNFEHLT 464 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~-----~~~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~ 464 (604)
...+..++|+|||+++++++. ++.+.+|+......... ....+.++.++|+++.+++++. +..|.+|+.....
T Consensus 82 ~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~ 161 (333)
T d1ri6a_ 82 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 161 (333)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCC
Confidence 455778999999999999885 66899998854332221 1124778899999998887775 4579999987643
Q ss_pred ccc-------cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCcee----eEeec---cccceEEEEeeeCCCCC
Q psy10566 465 DSN-------LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILL----RKFQG---VTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 465 ~~~-------~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~----~~~~~---~~~~~~~i~~~~~~~~~ 529 (604)
... ..........++|++++..++... ..+...+|+....... ..... ............+++++
T Consensus 162 ~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~ 241 (333)
T d1ri6a_ 162 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 241 (333)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred cceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEeccc
Confidence 222 112345567899999999887665 4567788876543211 11111 11111112223446888
Q ss_pred cEEEEE-eCCCcEEEEeCCCCcceEEee---CCCCCeeEEEEcCCCCcE-EEEEeCCCcEEEECCCC
Q psy10566 530 DFVASG-SEDGKVYIWHVKRELPIATLS---GHTRTVSCVAWNPVYHQM-IASVSDDCTVRIWGPHL 591 (604)
Q Consensus 530 ~~l~sg-s~dg~I~iwd~~~~~~~~~l~---~h~~~V~~v~~sp~~~~~-l~s~s~Dg~I~iW~~~~ 591 (604)
++++.. ..++.+.+|++........+. .+...+.+++|+|| +++ +++++.++.|++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spD-Gk~l~va~~~~~~v~v~~id~ 307 (333)
T d1ri6a_ 242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHS-GKYLIAAGQKSHHISVYEIVG 307 (333)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTT-SSEEEEECTTTCEEEEEEEET
T ss_pred CceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCC-CCEEEEEECCCCeEEEEEEEC
Confidence 766554 557899999987654444333 23456789999999 555 45555679999996643
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.78 E-value=7.8e-18 Score=165.89 Aligned_cols=254 Identities=16% Similarity=0.106 Sum_probs=180.9
Q ss_pred ccceeeccc--CCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEeccCC-----CCeeEEEECCCCCeE
Q psy10566 291 CETTQVLND--HCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-----LGVAYLAWSPDSSHL 362 (604)
Q Consensus 291 ~~~~~~l~~--H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-----~~V~~l~~spd~~~l 362 (604)
.+.++.+.. +...+.+++|+|||+++ ++++.++.|.+||+. +++.+..+..+. ..+..++|+|+++++
T Consensus 21 ~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~----t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l 96 (337)
T d1pbyb_ 21 MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV----TGETLGRIDLSTPEERVKSLFGAALSPDGKTL 96 (337)
T ss_dssp TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETT----TCCEEEEEECCBTTEEEECTTCEEECTTSSEE
T ss_pred CeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECC----CCcEEEEEecCCCcccccceeeEEEcCCCcEE
Confidence 355666654 44568899999999987 566789999999998 445555555443 345689999999999
Q ss_pred EEEeCC----------CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec
Q psy10566 363 LVVGPE----------DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG 431 (604)
Q Consensus 363 ~s~~~d----------~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~ 431 (604)
++++.+ ....+.+||..++.....+. ....+..++|+|+|+++++++.+ +.+||.. ++....+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~ 172 (337)
T d1pbyb_ 97 AIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--APRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--CCSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECS
T ss_pred EEeecCCcceeeeccccccceeeccccCCeEEEecc--ccCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeec
Confidence 888642 11278999999999888776 34568899999999999998754 6678884 343333321
Q ss_pred e-------------------------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc--cccCCCCeeEEEECCCC
Q psy10566 432 V-------------------------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN--LLQEDHPVMSFTIDATD 484 (604)
Q Consensus 432 ~-------------------------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~--~~~~~~~i~~~~~s~~~ 484 (604)
. .........+......+..++.+.+||..+..... ...+...+..+.+++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (337)
T d1pbyb_ 173 QSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK 252 (337)
T ss_dssp TTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTS
T ss_pred CCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccc
Confidence 1 01111111222222223334568889888765433 23356678889999999
Q ss_pred CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC
Q psy10566 485 RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 485 ~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h 558 (604)
.+++++ ++.|++||+.+++.+..+.... . +.++.++|+|++|++++.||.|+|||..+++.+.++...
T Consensus 253 ~~~~~~--~~~i~v~d~~~~~~~~~~~~~~-~---~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~ 320 (337)
T d1pbyb_ 253 TRAFGA--YNVLESFDLEKNASIKRVPLPH-S---YYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp SEEEEE--ESEEEEEETTTTEEEEEEECSS-C---CCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred eEEEEc--cccEEEEECCCCcEEEEEcCCC-C---EEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEECC
Confidence 988766 5889999999999988876432 2 234566899999999999999999999999999888643
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.75 E-value=6.1e-17 Score=161.12 Aligned_cols=276 Identities=12% Similarity=0.028 Sum_probs=185.1
Q ss_pred EEEcCCCCeEEEEE-----CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--------CceEE
Q psy10566 307 CKFSPDGLKLATGS-----KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--------DCHEL 373 (604)
Q Consensus 307 v~fspdg~~lasgs-----~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--------~~~~i 373 (604)
.+.+|||+.++... .++.|.+||.. +.+.+.++..+.. ..++|||||++|++++.. ..+.|
T Consensus 7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~----tg~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGE----AGRVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETT----TTEEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EeeCCCCCEEEEEecccCCCcCeEEEEECC----CCcEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEE
Confidence 46689999887653 45679999988 5556667765544 479999999998876431 11379
Q ss_pred EEEECCCceEEEEecCCC------CCCeEEEEEecCCCEEEEEe--cCCeEEEEEcC-CCeeeeeece---------eEE
Q psy10566 374 WVWNIETELLRVKLNHSP------EDSLTSCSWNRDGTKFVCGG--IRGQFYQCDIE-GQVLDSWEGV---------RVN 435 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~-~~~~~~~~~~---------~v~ 435 (604)
++||..+++....+.... ......++|+|+++++++++ .+..+.+|+.. ++.+..+... ...
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 160 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcc
Confidence 999999998877654211 12345689999999888775 45688999995 4444444332 123
Q ss_pred EEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee--eEeec
Q psy10566 436 CLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL--RKFQG 512 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~--~~~~~ 512 (604)
.+.++++++.++... .++.+.+++...... .+...+....+.+++..++.++.++.+++|++..+... .....
T Consensus 161 ~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 236 (355)
T d2bbkh_ 161 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHP----EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEA 236 (355)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSC----TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEES
T ss_pred eEEEcCCCCEEEEEecCCCeEEEEecccccc----eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCC
Confidence 456667766655443 334455555443322 12233455677888889999999999999999876532 22221
Q ss_pred cccc----eE---EEEeeeCCCCCcEEEEEeCC----------CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc-E
Q psy10566 513 VTQG----QF---TIHSCFGGANQDFVASGSED----------GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ-M 574 (604)
Q Consensus 513 ~~~~----~~---~i~~~~~~~~~~~l~sgs~d----------g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~-~ 574 (604)
+... .. ......+++++..++..+.+ +.|.+||..+++.+..+.. ...+.+++|+|++.. +
T Consensus 237 ~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l 315 (355)
T d2bbkh_ 237 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLL 315 (355)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEE
T ss_pred cccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecC-CCCEEEEEEcCCCCeEE
Confidence 1100 00 00113345788877766543 3699999999999888874 456899999999443 5
Q ss_pred EEEEeCCCcEEEECCCCCC
Q psy10566 575 IASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++.|++|++||+.+++
T Consensus 316 ~v~~~~d~~i~v~D~~tg~ 334 (355)
T d2bbkh_ 316 YALSTGDKTLYIHDAESGE 334 (355)
T ss_dssp EEEETTTTEEEEEETTTCC
T ss_pred EEEECCCCEEEEEECCCCC
Confidence 6778889999999999886
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=1.3e-15 Score=149.69 Aligned_cols=252 Identities=9% Similarity=0.077 Sum_probs=171.8
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
..|.+.|.+++|||||++|++++ .|+.|++|++.............. +...+..++|+|||++|++++.++ ..+.+|
T Consensus 33 ~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~-~~~~p~~l~~spDg~~l~v~~~~~-~~v~~~ 110 (333)
T d1ri6a_ 33 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-LPGSLTHISTDHQGQFVFVGSYNA-GNVSVT 110 (333)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-CSSCCSEEEECTTSSEEEEEETTT-TEEEEE
T ss_pred EcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc-cCCCceEEEEcCCCCEEeecccCC-Cceeee
Confidence 35889999999999999886555 589999999985444433333332 445678899999999999998755 389999
Q ss_pred ECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecC-CeEEEEEcCC--Ceeeee-------eceeEEEEEEcCCCCE
Q psy10566 377 NIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIR-GQFYQCDIEG--QVLDSW-------EGVRVNCLWCRSDGKS 445 (604)
Q Consensus 377 d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~--~~~~~~-------~~~~v~~l~~s~~g~~ 445 (604)
+........... ..+...+.++.++|+++++++++.+ ..|.+|+... ...... .+.....++|++++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~ 190 (333)
T d1ri6a_ 111 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 190 (333)
T ss_dssp EEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred ccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEecccee
Confidence 887765443332 2345668899999999998887755 5789998842 221111 1235678999999998
Q ss_pred EEEEe-CCCeEEEEEcCCCcccc-----------cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec
Q psy10566 446 VLAAD-THHRIRTYNFEHLTDSN-----------LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 446 l~~~~-~dg~I~i~d~~~~~~~~-----------~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~ 512 (604)
++... ..+...+|+........ ..........++++++++++++.. .++.+.+|++...........
T Consensus 191 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (333)
T d1ri6a_ 191 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 270 (333)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEE
Confidence 77655 45678888865432111 111234567789999999776654 567899999876655444443
Q ss_pred cccceEEEEeeeCCCCCcEEEEEe-CCCcEEEE--eCCCCcc
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGS-EDGKVYIW--HVKRELP 551 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iw--d~~~~~~ 551 (604)
+.........+.++|+|++|++++ .++.|.+| |..+|++
T Consensus 271 ~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 271 FQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp EEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence 322111223345689999877765 46899999 4556654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.73 E-value=3.8e-15 Score=149.08 Aligned_cols=264 Identities=10% Similarity=-0.068 Sum_probs=183.4
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccCCCCe-------eEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGHTLGV-------AYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V-------~~l 353 (604)
.+.+.++.++... .++|||||++|++++ .++.|.|||.. +.+....+..+.... ..+
T Consensus 57 g~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~----t~~~~~~~~~~~~~~~~~~~~~~~~ 130 (373)
T d2madh_ 57 GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV----TFLPIADIELPDAPRFDVGPYSWMN 130 (373)
T ss_pred CCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECC----CCcEEEEEecCCcceeEeccCCCcE
Confidence 4566667666544 699999999998875 45789999998 445555555544332 457
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCe-eeeeec
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQV-LDSWEG 431 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~-~~~~~~ 431 (604)
.|+++++.++....+....+.+|+..+.+...... ...++.|+|+++.+ ++.+.|+.+.+|+..... ......
T Consensus 131 ~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~ 205 (373)
T d2madh_ 131 ANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS-----SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVG 205 (373)
T ss_pred EEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec-----cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEee
Confidence 89999998877765544478999998877655443 35688999998755 678899999999985433 222221
Q ss_pred ------e--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-------------CCCCeeEEEECCCCCEE---
Q psy10566 432 ------V--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-------------EDHPVMSFTIDATDRLA--- 487 (604)
Q Consensus 432 ------~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l--- 487 (604)
. ......+.+++. ++..+.++.+.+|+........... .......+++++++..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 284 (373)
T d2madh_ 206 AMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLL 284 (373)
T ss_pred eccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEe
Confidence 1 233445555554 5566678889999887653221111 11233445566665544
Q ss_pred -------EEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc--EEEEEeCCCcEEEEeCCCCcceEEeeCC
Q psy10566 488 -------LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 488 -------~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~sgs~dg~I~iwd~~~~~~~~~l~~h 558 (604)
+....++.+.+||..+++.+..+..... +..+.++|||+ ++++++.|+.|++||+.+++.+.++.++
T Consensus 285 ~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~----~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~ 360 (373)
T d2madh_ 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHD----VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVEL 360 (373)
T ss_pred cCCCceEEeecCCCeEEEEECCCCcEEEEecCCCC----eeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCC
Confidence 4455667899999999998887764332 33456689998 4578899999999999999999999988
Q ss_pred CCCeeEEEEcCC
Q psy10566 559 TRTVSCVAWNPV 570 (604)
Q Consensus 559 ~~~V~~v~~sp~ 570 (604)
....+.+++.++
T Consensus 361 g~~P~~l~~~~~ 372 (373)
T d2madh_ 361 GSGPQVLSVMNE 372 (373)
T ss_pred CCCCcEEEEecC
Confidence 888888887653
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.71 E-value=2.3e-15 Score=149.48 Aligned_cols=268 Identities=13% Similarity=0.029 Sum_probs=179.1
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEE----------ECCCeEEEEEeCCCCceeEeeEEeccCC-------CCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATG----------SKDTTVIIWDVDPVTFTCQHRKTLEGHT-------LGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasg----------s~dg~i~iwd~~~~~~~~~~~~~l~~h~-------~~V~~l 353 (604)
.+.+.++..+... .++|||||++|++. +.|+.|++||.. +.+....+..+. .....+
T Consensus 38 g~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~----t~~~~~~~~~~~~~~~~~~~~~~~~ 111 (355)
T d2bbkh_ 38 GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV----TLLPTADIELPDAPRFLVGTYPWMT 111 (355)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEEEEETTCCCCCBSCCGGGE
T ss_pred CcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECC----CCCEEEEEecCCcceeecCCCCceE
Confidence 4556666655544 69999999988764 347899999998 333344433222 234568
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC------CCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCee
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE------DSLTSCSWNRDGTKFVCGGI-RGQFYQCDIEGQVL 426 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~ 426 (604)
+|+|++++++++.......+.+|+..+++....+..... .....+.++++++.++.... ++.+.+++.....
T Consensus 112 ~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~- 190 (355)
T d2bbkh_ 112 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH- 190 (355)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS-
T ss_pred EEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc-
Confidence 999999999888755445899999999988776653211 11233455555555444322 2333333332110
Q ss_pred eeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-------------CCCCeeEEEECCCCCEEEEEecC
Q psy10566 427 DSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-------------EDHPVMSFTIDATDRLALLNVST 493 (604)
Q Consensus 427 ~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~~d 493 (604)
......+....+.+++..++.++.++.+++|++.......... .......+++++++..+++...+
T Consensus 191 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~ 269 (355)
T d2bbkh_ 191 -PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 269 (355)
T ss_dssp -CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred -ceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEecc
Confidence 0011134455678888889999999999999998764322211 01234568899999988877654
Q ss_pred ----------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc--EEEEEeCCCcEEEEeCCCCcceEEeeCCCCC
Q psy10566 494 ----------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTRT 561 (604)
Q Consensus 494 ----------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~ 561 (604)
+.|.+||..+++.+..+.... .+..+.++|+|+ ++++++.|+.|++||.++++.+.++.++...
T Consensus 270 ~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~----~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~ 345 (355)
T d2bbkh_ 270 RDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 345 (355)
T ss_dssp CCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS
T ss_pred CCceeecCCCCeEEEEeCCCCcEEEEecCCC----CEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCC
Confidence 369999999999888776432 234456689987 5667788999999999999999999887666
Q ss_pred eeEEEEcCC
Q psy10566 562 VSCVAWNPV 570 (604)
Q Consensus 562 V~~v~~sp~ 570 (604)
...+.+.++
T Consensus 346 p~~i~~~d~ 354 (355)
T d2bbkh_ 346 PQVITTADM 354 (355)
T ss_dssp CCEEECCCC
T ss_pred ccEEEeCCC
Confidence 666666543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.70 E-value=2.5e-16 Score=155.53 Aligned_cols=259 Identities=12% Similarity=0.046 Sum_probs=173.9
Q ss_pred ccceeecc-cCCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEeccC------CCCeeEEEECCCCCeE
Q psy10566 291 CETTQVLN-DHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGH------TLGVAYLAWSPDSSHL 362 (604)
Q Consensus 291 ~~~~~~l~-~H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~h------~~~V~~l~~spd~~~l 362 (604)
.+.++++. .|...+.+++|+|||+++ ++++.++.|.+||+. +.+....+... ...+..++|+|||+++
T Consensus 28 ~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~----t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l 103 (346)
T d1jmxb_ 28 DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD----TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEV 103 (346)
T ss_dssp TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT----TTEEEEEEESCCSTTEEEECSSCEEECTTSSEE
T ss_pred CCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCc----cCeeeeeecccccccccCCceEEEEEecCCCEE
Confidence 45667665 456778999999999976 555678999999998 34444444322 2346789999999999
Q ss_pred EEEeCCC----------ceEEEEEECCCceEEEEecC-CCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeee
Q psy10566 363 LVVGPED----------CHELWVWNIETELLRVKLNH-SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWE 430 (604)
Q Consensus 363 ~s~~~d~----------~~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~ 430 (604)
++++.+. ...+.+|+..+++....+.. .....+..+.+++++..++++ +.+.+|++ +++.+..+.
T Consensus 104 ~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 180 (346)
T d1jmxb_ 104 YATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALP 180 (346)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEEC
T ss_pred EEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEe
Confidence 8875321 12688999887764332211 122345666777777666543 45788887 455554443
Q ss_pred ce-eEEEEEEcCC--------------------------CCEEEEEeCCCeEEEEEcCCCccccc--ccCCCCeeEEEEC
Q psy10566 431 GV-RVNCLWCRSD--------------------------GKSVLAADTHHRIRTYNFEHLTDSNL--LQEDHPVMSFTID 481 (604)
Q Consensus 431 ~~-~v~~l~~s~~--------------------------g~~l~~~~~dg~I~i~d~~~~~~~~~--~~~~~~i~~~~~s 481 (604)
.+ ....+.++|+ ...+.++..++.+.+||..+...... ..+...+..+.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (346)
T d1jmxb_ 181 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 260 (346)
T ss_dssp STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred cCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEe
Confidence 21 1222222332 22333444556788888887654433 3456678889999
Q ss_pred CCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC
Q psy10566 482 ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561 (604)
Q Consensus 482 ~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~ 561 (604)
+++.+++.... +.|.+||..+++.+..+.... . +..+.++|||+++++++.||.|+|||..+++.+.++..+.+.
T Consensus 261 ~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~~-~---~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g~ 335 (346)
T d1jmxb_ 261 PKDPNQIYGVL-NRLAKYDLKQRKLIKAANLDH-T---YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGD 335 (346)
T ss_dssp SSCTTEEEEEE-SEEEEEETTTTEEEEEEECSS-C---CCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSSC
T ss_pred CCCCEEEEecC-CeEEEEECCCCcEEEEEcCCC-C---EEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCCC
Confidence 99988877654 679999999999888776432 2 334566899999999999999999999999999999865543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.55 E-value=2.6e-14 Score=143.04 Aligned_cols=284 Identities=6% Similarity=-0.107 Sum_probs=172.6
Q ss_pred CCCcEEEEEEcCCCCeE--E-EEECCCe--EEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-------
Q psy10566 300 HCDEVWFCKFSPDGLKL--A-TGSKDTT--VIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP------- 367 (604)
Q Consensus 300 H~~~V~~v~fspdg~~l--a-sgs~dg~--i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~------- 367 (604)
+.+....++..++++.. + +...+++ |.+||.. ..+.+..+.++..+ .++|+|||+.+++++.
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~----~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~ 91 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAG----CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETT----TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTS
T ss_pred cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCC----CCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccc
Confidence 44555556678888842 2 2345555 4555655 45556666666544 5899999999988753
Q ss_pred -CCceEEEEEECCCceEEEEecCCC------CCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC-CCeeeeeeceeEEEEE
Q psy10566 368 -EDCHELWVWNIETELLRVKLNHSP------EDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE-GQVLDSWEGVRVNCLW 438 (604)
Q Consensus 368 -d~~~~i~vwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~~v~~l~ 438 (604)
.....|++||..+++....+.... ......++|+|||++++++. .++.+.+||+. ++............ .
T Consensus 92 g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~ 170 (368)
T d1mdah_ 92 GKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH-I 170 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCC-C
T ss_pred cccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcce-E
Confidence 112379999999998877664211 12234689999999998876 56899999995 44444443221110 1
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCccccc-------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSNL-------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
.......+++.+.||.+.+++......... ..+...+....+.+++..+.. ..+.+++++...+.......
T Consensus 171 ~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~ 248 (368)
T d1mdah_ 171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAA 248 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECC
T ss_pred ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEe--cCCCEEEEeecCCceEEEee
Confidence 112234455566677777777655432211 122334456677777665543 34556666665543332111
Q ss_pred --cccc----ceEE---EEeeeCCCCCcEEEEEeCC---------CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc
Q psy10566 512 --GVTQ----GQFT---IHSCFGGANQDFVASGSED---------GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573 (604)
Q Consensus 512 --~~~~----~~~~---i~~~~~~~~~~~l~sgs~d---------g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~ 573 (604)
.... .... ......++++..++....+ ..|.+||..+++.+..+. +...+.+++|+||+..
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~-~~~~~~~~a~spDG~~ 327 (368)
T d1mdah_ 249 IDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGAS 327 (368)
T ss_dssp CCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE-EEEEECEEEECCSSSC
T ss_pred cccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec-CCCceeEEEECCCCCE
Confidence 1000 0000 0112234666665544322 359999999999888876 3457899999999544
Q ss_pred -EEEEEeCCCcEEEECCCCCC
Q psy10566 574 -MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 -~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++..|+.|++||..+++
T Consensus 328 ~ly~s~~~~~~v~v~D~~tgk 348 (368)
T d1mdah_ 328 DNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEETTTTEEEEEESSSCE
T ss_pred EEEEEeCCCCeEEEEECCCCC
Confidence 56788889999999999876
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.53 E-value=6.4e-13 Score=137.35 Aligned_cols=286 Identities=11% Similarity=0.030 Sum_probs=165.7
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEEC---------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSK---------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~---------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
.+..|...|.++.|||||++|+.++. ++.+.|||+. ..+ ...+..|...+..+.|||||+.++...
T Consensus 56 ~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~----~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~~ 130 (470)
T d2bgra1 56 TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN----KRQ-LITEERIPNNTQWVTWSPVGHKLAYVW 130 (470)
T ss_dssp TTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT----TTE-ECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred hhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECC----CCc-ccccccCCccccccccccCcceeeEee
Confidence 55677789999999999999998753 5678899998 222 456778889999999999999999976
Q ss_pred CCCceEEEEEECCCceEEEEecCCC-----------------CCCeEEEEEecCCCEEEEEecCCe-EEEEEc-------
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSP-----------------EDSLTSCSWNRDGTKFVCGGIRGQ-FYQCDI------- 421 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~s~~~dg~-i~iwd~------- 421 (604)
.. .+++|+..++........+. .+....+.|+|||++++....|.. +..|.+
T Consensus 131 ~~---~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~ 207 (470)
T d2bgra1 131 NN---DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES 207 (470)
T ss_dssp TT---EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT
T ss_pred cc---cceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCC
Confidence 54 59999999987665443221 123456889999999999876532 333322
Q ss_pred ----------------------------CCCe-eeee-------------eceeEEEEEEcCCCCEEEEEe-CCC---eE
Q psy10566 422 ----------------------------EGQV-LDSW-------------EGVRVNCLWCRSDGKSVLAAD-THH---RI 455 (604)
Q Consensus 422 ----------------------------~~~~-~~~~-------------~~~~v~~l~~s~~g~~l~~~~-~dg---~I 455 (604)
.+.. .... ....+..+.+.+++..++... ..+ .+
T Consensus 208 ~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~ 287 (470)
T d2bgra1 208 LQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVM 287 (470)
T ss_dssp CSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEE
T ss_pred CCCCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEE
Confidence 1000 0000 001245667777776555432 221 23
Q ss_pred EEE--EcCCCccccccc--------------CCCCeeEEEECCCCCEEEEEecCCeEEEE--ecCCCceeeEeeccccce
Q psy10566 456 RTY--NFEHLTDSNLLQ--------------EDHPVMSFTIDATDRLALLNVSTQGVHLW--DLRDRILLRKFQGVTQGQ 517 (604)
Q Consensus 456 ~i~--d~~~~~~~~~~~--------------~~~~i~~~~~s~~~~~l~~~~~dg~I~lw--d~~~~~~~~~~~~~~~~~ 517 (604)
.++ |..++....... +......+.+.+++.+++.+..+|..++| +...+.. ..+......+
T Consensus 288 ~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~-~~lt~g~~~v 366 (470)
T d2bgra1 288 DICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC-TFITKGTWEV 366 (470)
T ss_dssp EEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSCC-EESCCSSSCE
T ss_pred EEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCcCceeEEEeccCCce-eeeccCCeeE
Confidence 344 443332221110 01112222233333445667777765554 5544433 3333333333
Q ss_pred EEEEeeeCCCCCcEEEEEeCCC------cEEEEeCCCCcceEEe----eCCCCCeeEEEEcCCCCcEEEEEeC--CCcEE
Q psy10566 518 FTIHSCFGGANQDFVASGSEDG------KVYIWHVKRELPIATL----SGHTRTVSCVAWNPVYHQMIASVSD--DCTVR 585 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg------~I~iwd~~~~~~~~~l----~~h~~~V~~v~~sp~~~~~l~s~s~--Dg~I~ 585 (604)
..+ ..++ ++..+++++.++ .|+-.++..+.....+ .+|...+.+++|||++..++.+++. .-.+.
T Consensus 367 ~~~--~~~d-~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~ 443 (470)
T d2bgra1 367 IGI--EALT-SDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYT 443 (470)
T ss_dssp EEE--EEEC-SSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEE
T ss_pred EEE--EEEC-CCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEE
Confidence 333 2222 233334444332 1444455544444444 3678889999999994444545554 34588
Q ss_pred EECCCCCC
Q psy10566 586 IWGPHLNT 593 (604)
Q Consensus 586 iW~~~~~~ 593 (604)
+|+..+++
T Consensus 444 l~~~~~g~ 451 (470)
T d2bgra1 444 LHSSVNDK 451 (470)
T ss_dssp EEETTTTE
T ss_pred EEECCCCC
Confidence 88887765
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.51 E-value=2.1e-13 Score=136.23 Aligned_cols=260 Identities=9% Similarity=0.008 Sum_probs=169.0
Q ss_pred EEEEECCCeEEEEEeCCCCceeEeeEEecc------------------------------CCCCeeEEEECCCCCeEEEE
Q psy10566 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEG------------------------------HTLGVAYLAWSPDSSHLLVV 365 (604)
Q Consensus 316 lasgs~dg~i~iwd~~~~~~~~~~~~~l~~------------------------------h~~~V~~l~~spd~~~l~s~ 365 (604)
++||+.+|.|.||++. .++.+.++.- |........++|||++|++.
T Consensus 14 f~Sgg~sG~V~V~dlp----S~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~ 89 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVP----SMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFIN 89 (441)
T ss_dssp EEECBTTCCEEEEEET----TTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEE
T ss_pred EEeCCCCCcEEEEeCC----CCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEE
Confidence 6778899999999997 3333443321 22334455568999999887
Q ss_pred eCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCE--EEEEecCC-----------------eEEEEEcCC-Ce
Q psy10566 366 GPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTK--FVCGGIRG-----------------QFYQCDIEG-QV 425 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~s~~~dg-----------------~i~iwd~~~-~~ 425 (604)
...+ .+|.++|+.+++....+.......+..++|+|+|+. ++..+.+. .+..+|... +.
T Consensus 90 d~~~-~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v 168 (441)
T d1qnia2 90 DKAN-TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDV 168 (441)
T ss_dssp ETTT-TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSE
T ss_pred cCCC-CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcccee
Confidence 7655 389999999998877666556678999999999984 44444332 123355532 22
Q ss_pred eeeee-ceeEEEEEEcCCCCEEEEEeCCC-----------------------------------------eEEEEEcCCC
Q psy10566 426 LDSWE-GVRVNCLWCRSDGKSVLAADTHH-----------------------------------------RIRTYNFEHL 463 (604)
Q Consensus 426 ~~~~~-~~~v~~l~~s~~g~~l~~~~~dg-----------------------------------------~I~i~d~~~~ 463 (604)
..... +.....+.++|+|+++++++.+. .+.+++....
T Consensus 169 ~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~ 248 (441)
T d1qnia2 169 AWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGES 248 (441)
T ss_dssp EEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSC
T ss_pred eEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCC
Confidence 22221 23567889999999988876542 2233333333
Q ss_pred cccccccCCCCeeEEEECCCCCEEEE-EecCCeEEEEecCCCce--------eeEeeccccc-eEEEEeeeCCCCCcEEE
Q psy10566 464 TDSNLLQEDHPVMSFTIDATDRLALL-NVSTQGVHLWDLRDRIL--------LRKFQGVTQG-QFTIHSCFGGANQDFVA 533 (604)
Q Consensus 464 ~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~I~lwd~~~~~~--------~~~~~~~~~~-~~~i~~~~~~~~~~~l~ 533 (604)
.....+........+.++|||+++++ +..+++|.+||+.+... ...+.++... ..... ..+.++|+.+.
T Consensus 249 ~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh-~~fd~~g~~yt 327 (441)
T d1qnia2 249 EFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLH-TTFDGRGNAYT 327 (441)
T ss_dssp SSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEE-EEECSSSEEEE
T ss_pred ceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCccc-ceecCCceEEE
Confidence 33333444455678999999998766 45689999999875321 1111121111 11222 34568898888
Q ss_pred EEeCCCcEEEEeCCC----------CcceEEe-----eCCCCCeeEEEEcCCCCcEEEEE---eCCC
Q psy10566 534 SGSEDGKVYIWHVKR----------ELPIATL-----SGHTRTVSCVAWNPVYHQMIASV---SDDC 582 (604)
Q Consensus 534 sgs~dg~I~iwd~~~----------~~~~~~l-----~~h~~~V~~v~~sp~~~~~l~s~---s~Dg 582 (604)
+.+-|..|..|++.. ...+..+ .||...+.+.+++|+ +++|+++ |.|.
T Consensus 328 s~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pd-Gk~l~s~~k~s~dr 393 (441)
T d1qnia2 328 TLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDAD-GKWLVVLSKFSKDR 393 (441)
T ss_dssp EETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCC-CCEEEEEESCCGGG
T ss_pred cccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCC-CcEEEecCcccccc
Confidence 999999999999741 1233344 477777788889999 8999999 5554
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.48 E-value=9.4e-13 Score=131.39 Aligned_cols=259 Identities=8% Similarity=-0.062 Sum_probs=165.0
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccCC-------CCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGHT-------LGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h~-------~~V~~l 353 (604)
.+.+..+.+|... .++|+|||++|++.+ .|++|.+||.. +.+....+..+. .....+
T Consensus 56 ~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~----t~~~~~~i~~p~~~~~~~g~~p~~~ 129 (368)
T d1mdah_ 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV----TFLPIADIELPDAPRFSVGPRVHII 129 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT----TCCEEEEEEETTSCSCCBSCCTTSE
T ss_pred CcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECC----CCcEeeeecCCccceecccCCccce
Confidence 4556666666655 589999999888764 47789999988 444444444322 223468
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC--eeee---
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ--VLDS--- 428 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~--- 428 (604)
+|+|||++++++..+. +.+.+||+.+++....+.......+ +......++..+.||.+.+++.... ....
T Consensus 130 a~SpDGk~l~va~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~ 204 (368)
T d1mdah_ 130 GNCASSACLLFFLFGS-SAAAGLSVPGASDDQLTKSASCFHI----HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGA 204 (368)
T ss_dssp EECTTSSCEEEEECSS-SCEEEEEETTTEEEEEEECSSCCCC----EEEETTEEECCCCTTSCEEEECCSSCCCCEECCC
T ss_pred EECCCCCEEEEEeCCC-CeEEEEECCCCcEeEEeeccCcceE----ccCCCceEEEEcCCCCEEEEEecCCceeeeeeec
Confidence 9999999999887543 3899999999998887763322111 1123445666677777777776321 1110
Q ss_pred --e--eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-------------CCCCeeEEEECCCCCEEEEEe
Q psy10566 429 --W--EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-------------EDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 429 --~--~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~ 491 (604)
+ ....+....+.+++..+.. ..+.+++++........... .......+++++++..+++..
T Consensus 205 ~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~ 282 (368)
T d1mdah_ 205 QCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT 282 (368)
T ss_dssp CSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred ccccccccceeecccccCcEEEEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEe
Confidence 0 0112344556666654433 34556666655433221111 112234588899998887764
Q ss_pred cC---------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc--EEEEEeCCCcEEEEeCCCCcceEEeeCCCC
Q psy10566 492 ST---------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD--FVASGSEDGKVYIWHVKRELPIATLSGHTR 560 (604)
Q Consensus 492 ~d---------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~ 560 (604)
.+ ..|.+||..+++.+..+.... .+..+.++|||+ +++++..|+.|++||..+++.+.++.....
T Consensus 283 ~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~----~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~ 358 (368)
T d1mdah_ 283 VEHSRSCLAAAENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358 (368)
T ss_dssp EECSSCTTSCEEEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred cCCCceeecCCceEEEEECCCCcEeEEecCCC----ceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCCC
Confidence 43 259999999998887775332 344456679986 356777899999999999999999875443
Q ss_pred CeeEEEE
Q psy10566 561 TVSCVAW 567 (604)
Q Consensus 561 ~V~~v~~ 567 (604)
.+.|++
T Consensus 359 -P~~l~~ 364 (368)
T d1mdah_ 359 -PESLSV 364 (368)
T ss_dssp -CCEEEC
T ss_pred -CCEEEE
Confidence 355554
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.34 E-value=6e-11 Score=122.20 Aligned_cols=140 Identities=11% Similarity=0.134 Sum_probs=100.8
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee---EEeccCCCCeeEEEECCCCCeEEEEeCC-------CceEEEE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR---KTLEGHTLGVAYLAWSPDSSHLLVVGPE-------DCHELWV 375 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~---~~l~~h~~~V~~l~~spd~~~l~s~~~d-------~~~~i~v 375 (604)
.+.|.++++++.. .|+.+.+||+..+ ....+ ..+..|...|.++.|||||++|+.++.. ..+.+++
T Consensus 21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~--~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l 96 (470)
T d2bgra1 21 SLRWISDHEYLYK--QENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (470)
T ss_dssp CCEECSSSEEEEE--SSSCEEEEETTTC--CEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred CCEeCCCCEEEEE--cCCcEEEEECCCC--CEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEE
Confidence 3679999987764 4788999999832 22211 1334556789999999999999987642 1247899
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-eeeeeec--------------------eeE
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ-VLDSWEG--------------------VRV 434 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~--------------------~~v 434 (604)
||+.+++... +. .+...+..+.|+|||+.++.. .++.+++|+..+. ..+.... ...
T Consensus 97 ~d~~~~~~~~-l~-~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~ 173 (470)
T d2bgra1 97 YDLNKRQLIT-EE-RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (470)
T ss_dssp EETTTTEECC-SS-CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EECCCCcccc-cc-cCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCc
Confidence 9999987543 33 567789999999999999985 5678999998543 3222111 124
Q ss_pred EEEEEcCCCCEEEEEeCC
Q psy10566 435 NCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~d 452 (604)
..+.|+|||+.++....|
T Consensus 174 ~~~~wSPDGk~ia~~~~d 191 (470)
T d2bgra1 174 SALWWSPNGTFLAYAQFN 191 (470)
T ss_dssp BCEEECTTSSEEEEEEEE
T ss_pred cccEECCCCCccceeEec
Confidence 567899999999987654
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.30 E-value=1.9e-09 Score=106.59 Aligned_cols=274 Identities=8% Similarity=0.078 Sum_probs=164.3
Q ss_pred EEEEEC--CCeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC-ceEEEEecCCC
Q psy10566 316 LATGSK--DTTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSP 391 (604)
Q Consensus 316 lasgs~--dg~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~-~~~~~~~~~~~ 391 (604)
|+.|+. .+.|.++.++..+++...+.... .....+..|+|+|+++.|.++..++ +..|.+.. +..........
T Consensus 5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~---~~~~~i~~~~~~~~~~~~~~ 81 (365)
T d1jofa_ 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKK---WSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTE---EEEEEEEETTEEEEEEEEEC
T ss_pred EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeCCc---EEEEEEeCCCCeEEEeeecC
Confidence 566654 55788887776666665544432 2455677899999999998887654 55555543 22222221122
Q ss_pred CCCeEEEEEecCCCEEEE--Ee-cCCeEEEEEcC--CCeee------------ee------eceeEEEEEEcCCCCEEEE
Q psy10566 392 EDSLTSCSWNRDGTKFVC--GG-IRGQFYQCDIE--GQVLD------------SW------EGVRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s--~~-~dg~i~iwd~~--~~~~~------------~~------~~~~v~~l~~s~~g~~l~~ 448 (604)
......++++++++.++. +. ..+.|..+.+. +.... .. .+..+.++.|+|+|+++++
T Consensus 82 ~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v 161 (365)
T d1jofa_ 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEE
Confidence 334567788888885433 22 23555555431 11111 10 0114679999999999888
Q ss_pred EeC-CCeEEEEEcCCCcccc------cccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCceeeEee--cc-----
Q psy10566 449 ADT-HHRIRTYNFEHLTDSN------LLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRILLRKFQ--GV----- 513 (604)
Q Consensus 449 ~~~-dg~I~i~d~~~~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~~~~~~--~~----- 513 (604)
++. ...|.+|+........ ..........++|+|+++++++... +++|.+|++..+....... ..
T Consensus 162 ~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~ 241 (365)
T d1jofa_ 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred eeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccc
Confidence 865 3578888865432211 1223567889999999998876664 7889999987654322111 00
Q ss_pred ---------ccceEEEEeeeCCCCCcEEEEEeC------CCcEEEEeCCCCcceEEe------eCCCCCeeEEEEcCCCC
Q psy10566 514 ---------TQGQFTIHSCFGGANQDFVASGSE------DGKVYIWHVKRELPIATL------SGHTRTVSCVAWNPVYH 572 (604)
Q Consensus 514 ---------~~~~~~i~~~~~~~~~~~l~sgs~------dg~I~iwd~~~~~~~~~l------~~h~~~V~~v~~sp~~~ 572 (604)
.........+.++|+|++++++.. .+.|..|++.....+... ........+++++|.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G 321 (365)
T d1jofa_ 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred cccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCC
Confidence 011112333456799999988743 234777777643222211 12334568899998325
Q ss_pred c-EEEEEeCCCcEEEECCCCC
Q psy10566 573 Q-MIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 573 ~-~l~s~s~Dg~I~iW~~~~~ 592 (604)
. ++++...++.|.+|+++..
T Consensus 322 ~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 322 EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TEEEEECSSSCEEEEEEEETT
T ss_pred CEEEEEeCCCCeEEEEEEeCC
Confidence 5 4555567899999987654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.20 E-value=2.1e-08 Score=94.95 Aligned_cols=240 Identities=12% Similarity=0.147 Sum_probs=164.3
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
.-..++++++|+.+++-.....|++||.+ +..+..+.. .......+++.++....+.+.......|..+
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-----G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~ 98 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-----GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 98 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-----SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC-----CCEEEEecccCCCcccccccccccccccccccceeccCCccccccc
Confidence 46889999999988887778899999865 222333321 1223455666555444333333222378888
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec----eeEEEEEEcCCCCEEEEEeCC
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG----VRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~v~~l~~s~~g~~l~~~~~d 452 (604)
+. .+.....+..........+++.+++..+++....+.+.+++.+++.+..+.. .....+++.++++.+++....
T Consensus 99 ~~-~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~ 177 (279)
T d1q7fa_ 99 NQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 177 (279)
T ss_dssp CT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred cc-cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCceeecccccccccccceeeeccceeEEeeeccc
Confidence 76 4566666654555668899999999999888888899999999988877643 257788999999988888889
Q ss_pred CeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 453 HRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
+.|++||........+- ........++++++|+.+++-.. ++.|.+|+ .+++.+..+......... ..++..++|
T Consensus 178 ~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p-~~vav~~dG 255 (279)
T d1q7fa_ 178 HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQC-FDVALMDDG 255 (279)
T ss_dssp TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCE-EEEEEETTT
T ss_pred cceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCE-eEEEEeCCC
Confidence 99999997654322221 12345788999999997776544 45799998 467777776543322112 223345888
Q ss_pred cEEEEEeCCCcEEEEeCCCCcc
Q psy10566 530 DFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
.+++ ++.++.|++|......+
T Consensus 256 ~l~V-~~~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 256 SVVL-ASKDYRLYIYRYVQLAP 276 (279)
T ss_dssp EEEE-EETTTEEEEEECSCCCC
T ss_pred cEEE-EeCCCeEEEEEeeeecC
Confidence 7655 55789999999876544
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.19 E-value=5e-10 Score=111.42 Aligned_cols=233 Identities=12% Similarity=0.034 Sum_probs=151.5
Q ss_pred ccCCCcEEEEEEcCCCCeEEEE-ECCCeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCC--eEEEEeCCC----
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATG-SKDTTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSS--HLLVVGPED---- 369 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasg-s~dg~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~--~l~s~~~d~---- 369 (604)
..|.....+..++|||++|+.. ..+++|.++|+. +++....+. .+...+..++|+|+++ +++..+.+.
T Consensus 68 d~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~----t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~ 143 (441)
T d1qnia2 68 DCHHPHISMTDGRYDGKYLFINDKANTRVARIRLD----IMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQP 143 (441)
T ss_dssp CBCCCEEEEETTEEEEEEEEEEETTTTEEEEEETT----TTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESS
T ss_pred cccCCCcceecccCCCCEEEEEcCCCCEEEEEECC----CCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCccccc
Confidence 3466677788889999988655 467899999998 444444333 2567899999999998 444444332
Q ss_pred -----------ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC------------------------
Q psy10566 370 -----------CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG------------------------ 414 (604)
Q Consensus 370 -----------~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg------------------------ 414 (604)
...+..+|..+.+...++... .....+.|+|+|+++++++.+.
T Consensus 144 ~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~--~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~ 221 (441)
T d1qnia2 144 NDGTDFSLDNSYTMFTAIDAETMDVAWQVIVD--GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVER 221 (441)
T ss_dssp CSSSCCCGGGEEEEEEEEETTTCSEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHH
T ss_pred CcccccccccccceEEeecCccceeeEEEecC--CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccc
Confidence 013456888888777666532 4578899999999998887542
Q ss_pred -----------------eEEEEEcC-CCeeeeee-ceeEEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCccc--------
Q psy10566 415 -----------------QFYQCDIE-GQVLDSWE-GVRVNCLWCRSDGKSVLA-ADTHHRIRTYNFEHLTDS-------- 466 (604)
Q Consensus 415 -----------------~i~iwd~~-~~~~~~~~-~~~v~~l~~s~~g~~l~~-~~~dg~I~i~d~~~~~~~-------- 466 (604)
.+.+++.. .+.+..+. +.....+.++|||+++++ +..+++|.+||+.+....
T Consensus 222 ~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~ 301 (441)
T d1qnia2 222 IAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELR 301 (441)
T ss_dssp HHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGG
T ss_pred eEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcc
Confidence 12222221 12222222 224567899999998755 567899999998763211
Q ss_pred c-ccc---CCCCeeEEEECCCCCEEEEEecCCeEEEEecCC----------CceeeEeeccc--cceEEEEeeeCCCCCc
Q psy10566 467 N-LLQ---EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD----------RILLRKFQGVT--QGQFTIHSCFGGANQD 530 (604)
Q Consensus 467 ~-~~~---~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~----------~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 530 (604)
. +.. ..-.....+|+++|..+.+...|..|..|++.. ...+.++..|- ++...+....++|+|+
T Consensus 302 ~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk 381 (441)
T d1qnia2 302 DTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGK 381 (441)
T ss_dssp GGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCC
T ss_pred eEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCc
Confidence 0 011 122345568999998888888999999999842 12333333221 2222344456789999
Q ss_pred EEEEEe
Q psy10566 531 FVASGS 536 (604)
Q Consensus 531 ~l~sgs 536 (604)
||++++
T Consensus 382 ~l~s~~ 387 (441)
T d1qnia2 382 WLVVLS 387 (441)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 999994
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.15 E-value=2.5e-08 Score=96.10 Aligned_cols=241 Identities=9% Similarity=0.101 Sum_probs=159.5
Q ss_pred CCeeEEEECCCCCeEEEEeCCC-----ceEEEEEECCCceEEEEecC---CCCCCeEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPED-----CHELWVWNIETELLRVKLNH---SPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~-----~~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
.....++|.|+|+.+++..... .++|..||..++........ ........++|.++++.++++...+.+..+
T Consensus 18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~ 97 (314)
T d1pjxa_ 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence 3466789999998777654321 12799999988865443321 112235789999999988888888889999
Q ss_pred EcCCCeeeeeec----e---eEEEEEEcCCCCEEEEEeC---------------CCeEEEEEcCCCcccccccCCCCeeE
Q psy10566 420 DIEGQVLDSWEG----V---RVNCLWCRSDGKSVLAADT---------------HHRIRTYNFEHLTDSNLLQEDHPVMS 477 (604)
Q Consensus 420 d~~~~~~~~~~~----~---~v~~l~~s~~g~~l~~~~~---------------dg~I~i~d~~~~~~~~~~~~~~~i~~ 477 (604)
+.++........ . ..+.+++.++|+..++-.. .|.|..++... +.......-...+.
T Consensus 98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg-~~~~~~~~~~~pNG 176 (314)
T d1pjxa_ 98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QMIQVDTAFQFPNG 176 (314)
T ss_dssp ETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CEEEEEEEESSEEE
T ss_pred eCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC-ceeEeeCCcceeee
Confidence 998765443321 1 3578999999987776432 23444444332 22222222334467
Q ss_pred EEECCCCC-----EEEEEecCCeEEEEecCCCceee------EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 478 FTIDATDR-----LALLNVSTQGVHLWDLRDRILLR------KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 478 ~~~s~~~~-----~l~~~~~dg~I~lwd~~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
++|++++. +.++-+..+.|..||+.....+. .+.+... .....+....+|++.++....+.|.+||.
T Consensus 177 i~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~--~~pdGiavD~~GnlyVa~~~~g~I~~~dp 254 (314)
T d1pjxa_ 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE--GGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS--CEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred eEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEcccccc--ccceeeEEecCCcEEEEEcCCCEEEEEeC
Confidence 88988764 44445667889999876433222 1111111 11222344688998888888899999999
Q ss_pred CCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 547 KRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 547 ~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+.++.+..+..+...+++++|.|++..+++|.+.+|.|...++..
T Consensus 255 ~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 255 DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 988888888777778899999998546788888889887777643
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.13 E-value=3.4e-08 Score=95.08 Aligned_cols=238 Identities=11% Similarity=0.129 Sum_probs=153.9
Q ss_pred cEEEEEEcCCCCeEEEEEC-------CCeEEEEEeCCCCceeEeeEE--eccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 303 EVWFCKFSPDGLKLATGSK-------DTTVIIWDVDPVTFTCQHRKT--LEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~-------dg~i~iwd~~~~~~~~~~~~~--l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
..-.++|.++|+++++... +|+|..||.. +........ ..........++|.+++..++++.... .+
T Consensus 19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~--~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~--~i 94 (314)
T d1pjxa_ 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK--TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GL 94 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT--TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EE
T ss_pred CCeEeEEeCCCCEEEEECccccccccCCEEEEEECC--CCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCC--eE
Confidence 3456789999997765432 4567777766 222222111 111123357899999999888877665 68
Q ss_pred EEEECCCceEEEEecCCCC---CCeEEEEEecCCCEEEEEec---------------CCeEEEEEcCCCeeeeeece-eE
Q psy10566 374 WVWNIETELLRVKLNHSPE---DSLTSCSWNRDGTKFVCGGI---------------RGQFYQCDIEGQVLDSWEGV-RV 434 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~-~v 434 (604)
..++...+........... .....+++.++|+..++-.. .|.|..++.+++......+. ..
T Consensus 95 ~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~~~~~~p 174 (314)
T d1pjxa_ 95 LVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFP 174 (314)
T ss_dssp EEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSE
T ss_pred EEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCceeEeeCCccee
Confidence 8889876654332221111 13578999999988887432 34666677777665544433 45
Q ss_pred EEEEEcCCCC-----EEEEEeCCCeEEEEEcCCCcccc---c---cc--CCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 435 NCLWCRSDGK-----SVLAADTHHRIRTYNFEHLTDSN---L---LQ--EDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 435 ~~l~~s~~g~-----~l~~~~~dg~I~i~d~~~~~~~~---~---~~--~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
+.++++++++ ..++-+..+.|..||+....... . +. .......++++.+|+..++....+.|.+||.
T Consensus 175 NGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp 254 (314)
T d1pjxa_ 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred eeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeC
Confidence 7889988765 44455677889999876432111 1 11 1223567999999998888888999999999
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCC
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVK 547 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~ 547 (604)
+.+.....+....... ..+++.++++ ++++.+.+|.|+.+++.
T Consensus 255 ~~g~~~~~i~~p~~~~---t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 255 DGGQPKMRIRCPFEKP---SNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TCBSCSEEEECSSSCE---EEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCEEEEEEECCCCCE---EEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 8887777666543332 2344468886 55677778989888875
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=1.1e-07 Score=88.87 Aligned_cols=234 Identities=16% Similarity=0.150 Sum_probs=148.8
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEEec
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSWNR 402 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 402 (604)
.|.|-|.+ ... ...+..+...+.+.+|||||+.|+...... ...+++.+..++....... +........|+|
T Consensus 20 ~l~i~d~d--G~~---~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~sp 92 (269)
T d2hqsa1 20 ELRVSDYD--GYN---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS--FPRHNGAPAFSP 92 (269)
T ss_dssp EEEEEETT--SCS---CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC--CSSCEEEEEECT
T ss_pred EEEEEcCC--CCC---cEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEee--eecccccceecC
Confidence 46666665 222 233334566788999999999998776543 2257777887777655443 456788899999
Q ss_pred CCCEEEEEecC-CeEEEE--EcC-CCeeeeeece-eEEEEEEcCCCCEEEEEe-CCC--eEEEEEcCCCcccccccCCCC
Q psy10566 403 DGTKFVCGGIR-GQFYQC--DIE-GQVLDSWEGV-RVNCLWCRSDGKSVLAAD-THH--RIRTYNFEHLTDSNLLQEDHP 474 (604)
Q Consensus 403 ~~~~l~s~~~d-g~i~iw--d~~-~~~~~~~~~~-~v~~l~~s~~g~~l~~~~-~dg--~I~i~d~~~~~~~~~~~~~~~ 474 (604)
+|+.++..... +...++ ... .......... ......+++++..++..+ .++ .|...+...............
T Consensus 93 dg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ 172 (269)
T d2hqsa1 93 DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQ 172 (269)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSE
T ss_pred CCCeeeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeeccccc
Confidence 99988876543 322222 222 2222222222 344456677776655544 344 567777777666666666677
Q ss_pred eeEEEECCCCCEEEEEecCC---eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC---CCcEEEEeCCC
Q psy10566 475 VMSFTIDATDRLALLNVSTQ---GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE---DGKVYIWHVKR 548 (604)
Q Consensus 475 i~~~~~s~~~~~l~~~~~dg---~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~---dg~I~iwd~~~ 548 (604)
.....++|+++.++..+.++ .+.+.|...+... .......... ..++|||+.|+..+. ...|+++++..
T Consensus 173 ~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~---p~~SPDG~~i~f~s~~~~~~~l~~~~~dg 247 (269)
T d2hqsa1 173 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ--VLSSTFLDET---PSLAPNGTMVIYSSSQGMGSVLNLVSTDG 247 (269)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE--ECCCSSSCEE---EEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred ccccccccccceeEEEeecCCceeeeEeecccccce--EeecCccccc---eEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 78889999999988877654 3555565554332 2222222222 346799998876554 34689999986
Q ss_pred CcceEEeeCCCCCeeEEEEcCC
Q psy10566 549 ELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 549 ~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
+. ...+....+.+...+|+|-
T Consensus 248 ~~-~~~lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 248 RF-KARLPATDGQVKFPAWSPY 268 (269)
T ss_dssp CC-EEECCCSSSEEEEEEECCC
T ss_pred CC-EEEEeCCCCcEEeEEeCCC
Confidence 65 4566667788889999983
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.10 E-value=7.2e-08 Score=92.31 Aligned_cols=237 Identities=12% Similarity=0.045 Sum_probs=153.8
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.|.+.+..+...+ .+..++++|||+++++...+++|..|+.+ +.. ..+......+.+++|+|||+.+++...+
T Consensus 16 ~~~~v~~~~p~~~-~~e~iAv~pdG~l~vt~~~~~~I~~i~p~---g~~---~~~~~~~~~~~gla~~~dG~l~v~~~~~ 88 (302)
T d2p4oa1 16 APAKIITSFPVNT-FLENLASAPDGTIFVTNHEVGEIVSITPD---GNQ---QIHATVEGKVSGLAFTSNGDLVATGWNA 88 (302)
T ss_dssp CCEEEEEEECTTC-CEEEEEECTTSCEEEEETTTTEEEEECTT---CCE---EEEEECSSEEEEEEECTTSCEEEEEECT
T ss_pred CcccEEEECCCCC-CcCCEEECCCCCEEEEeCCCCEEEEEeCC---CCE---EEEEcCCCCcceEEEcCCCCeEEEecCC
Confidence 3444455554322 58899999999999999889988888754 222 2333455679999999999988877666
Q ss_pred CceEEEEEECCC--ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec-------------ee
Q psy10566 369 DCHELWVWNIET--ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG-------------VR 433 (604)
Q Consensus 369 ~~~~i~vwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~ 433 (604)
+ .+..|+... +................+++.++++++++.+.++.+..++..+.....+.. ..
T Consensus 89 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (302)
T d2p4oa1 89 D--SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 166 (302)
T ss_dssp T--SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred c--eEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccc
Confidence 6 566666543 333333333345668899999999999988889999999886544332211 13
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc---cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEe
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN---LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKF 510 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~ 510 (604)
...+.+.. +..+++.+..+.|..++........ ..........++++++|++.++...++.|..|+.... .....
T Consensus 167 ~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~-~~~~~ 244 (302)
T d2p4oa1 167 ANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS-TTIIA 244 (302)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC-EEEEE
T ss_pred cccccccC-CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC-EEEEE
Confidence 45565543 3455566778889988887643222 1223445678999999998888888899999987543 32222
Q ss_pred eccc--cceEEEEeeeC--CCCCcEEEEEeCC
Q psy10566 511 QGVT--QGQFTIHSCFG--GANQDFVASGSED 538 (604)
Q Consensus 511 ~~~~--~~~~~i~~~~~--~~~~~~l~sgs~d 538 (604)
.... .....+ +|. ++|++.|+.++..
T Consensus 245 ~~~~~~~~pt~v--afg~~~~D~~~Lyvtt~~ 274 (302)
T d2p4oa1 245 QAEQGVIGSTAV--AFGQTEGDCTAIYVVTNG 274 (302)
T ss_dssp CGGGTCTTEEEE--EECCSTTTTTEEEEEECT
T ss_pred ecCCCCCCceEE--EEcCCCCCCCEEEEECCC
Confidence 2211 222222 232 5677777766544
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.08 E-value=4.6e-08 Score=91.46 Aligned_cols=236 Identities=9% Similarity=-0.043 Sum_probs=153.7
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCee
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVL 426 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~ 426 (604)
.....+++.++|+..++..... +.+..++........... ........++++++++.+++....+.+++++-. +..+
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~-~~i~~~~~~~~~~~~~~~-~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~ 91 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMY-GRVVKLATGSTGTTVLPF-NGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV 91 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSS-CEEEEEC----CEEECCC-CSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred CCCCEEEEcCCCCEEEEEcCCC-CEEEEEcCCCceEEEecc-CCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceee
Confidence 3468999999999777655443 367777665544333322 223346789999999887777666666665543 3333
Q ss_pred eeeec-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 427 DSWEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 427 ~~~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
....+ ....++++.++++.+++-..+..+..++.......... ........++++++++.+++...++.|..+|....
T Consensus 92 ~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~ 171 (260)
T d1rwia_ 92 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 171 (260)
T ss_dssp CCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eeeeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccc
Confidence 33332 35788999999998887777777888877654432222 22345678999999998888888899999998765
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee-CCCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
............... +.+.++|+++++....+.|..++..... ...+. ..-....+|+++++ +.++++-..+++
T Consensus 172 ~~~~~~~~~~~~p~g---i~~d~~g~l~vsd~~~~~i~~~~~~~~~-~~~~~~~~~~~P~~i~~d~~-g~l~vad~~~~r 246 (260)
T d1rwia_ 172 NQVVLPFTDITAPWG---IAVDEAGTVYVTEHNTNQVVKLLAGSTT-STVLPFTGLNTPLAVAVDSD-RTVYVADRGNDR 246 (260)
T ss_dssp CEEECCCSSCCSEEE---EEECTTCCEEEEETTTTEEEEECTTCSC-CEECCCCSCCCEEEEEECTT-CCEEEEEGGGTE
T ss_pred eeeeeeccccCCCcc---ceeeeeeeeeeeecCCCEEEEEeCCCCe-EEEEccCCCCCeEEEEEeCC-CCEEEEECCCCE
Confidence 433222122222222 3445788888888888899988866443 23332 23356789999998 688888777777
Q ss_pred EEEECCC
Q psy10566 584 VRIWGPH 590 (604)
Q Consensus 584 I~iW~~~ 590 (604)
|+..+..
T Consensus 247 I~~i~~~ 253 (260)
T d1rwia_ 247 VVKLTSL 253 (260)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 7665544
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.08 E-value=2.9e-08 Score=92.92 Aligned_cols=235 Identities=9% Similarity=-0.026 Sum_probs=150.8
Q ss_pred CcEEEEEEcCCCCeEEEE-ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLATG-SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasg-s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
-.-..++++++|...++. +..+.+..++... .........+ ......+++++++..+++....+ .+++++..+
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~---~~~~~~~~~~-~~~p~gvav~~~g~i~v~d~~~~--~i~~~~~~~ 87 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGS---TGTTVLPFNG-LYQPQGLAVDGAGTVYVTDFNNR--VVTLAAGSN 87 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC-------CEEECCCCS-CCSCCCEEECTTCCEEEEETTTE--EEEECTTCS
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCC---ceEEEeccCC-ccCceEEEEcCCCCEEEeeeeec--eeeeeeecc
Confidence 345789999999965554 4557777776651 1111222222 23467889999998766654443 677666555
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--c-eeEEEEEEcCCCCEEEEEeCCCeEEE
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--G-VRVNCLWCRSDGKSVLAADTHHRIRT 457 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~-~~v~~l~~s~~g~~l~~~~~dg~I~i 457 (604)
+...... .......++++.++++.+++-..+..+..++..+....... + .....+++.++++.+++...++.|..
T Consensus 88 ~~~~~~~--~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~ 165 (260)
T d1rwia_ 88 NQTVLPF--DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 165 (260)
T ss_dssp CCEECCC--CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEE
T ss_pred ceeeeee--eeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccc
Confidence 5544332 23356789999999998888777778888887655443332 1 24678899999998888888899999
Q ss_pred EEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe
Q psy10566 458 YNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 458 ~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs 536 (604)
+|.......... ........++++++|+++++....+.|..++...... ..+.. .... ....++++++|+++++-.
T Consensus 166 ~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~-~~~~-~P~~i~~d~~g~l~vad~ 242 (260)
T d1rwia_ 166 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPF-TGLN-TPLAVAVDSDRTVYVADR 242 (260)
T ss_dssp ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCC-CSCC-CEEEEEECTTCCEEEEEG
T ss_pred cccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEcc-CCCC-CeEEEEEeCCCCEEEEEC
Confidence 998765433332 3345678899999999888888888899888654422 22211 1101 112234457777777766
Q ss_pred CCCcEEEEeCC
Q psy10566 537 EDGKVYIWHVK 547 (604)
Q Consensus 537 ~dg~I~iwd~~ 547 (604)
.+++|+.++..
T Consensus 243 ~~~rI~~i~~~ 253 (260)
T d1rwia_ 243 GNDRVVKLTSL 253 (260)
T ss_dssp GGTEEEEECCC
T ss_pred CCCEEEEEeCC
Confidence 67777655543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.07 E-value=2.2e-07 Score=87.73 Aligned_cols=237 Identities=9% Similarity=0.068 Sum_probs=163.2
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC-----CCCCeEEEEEecCCC-EEEE-EecCCeEEEEEc
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS-----PEDSLTSCSWNRDGT-KFVC-GGIRGQFYQCDI 421 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~-~l~s-~~~dg~i~iwd~ 421 (604)
....|+++++|+.+++-.... .|++||.+ |..+..+... .......+++.++.. .+++ .+.++.|..++.
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~--rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 100 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNH--RIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 100 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGT--EEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred CccEEEEcCCCCEEEEECCCC--EEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc
Confidence 468999999998777655555 89999965 6655555321 112345666666544 3333 344568888888
Q ss_pred CCCeeeeeece---eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc--ccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 422 EGQVLDSWEGV---RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL--LQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 422 ~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
.+.....+... ....+++.++|..+++....+.+.+++......... ..+......+++.++++.+++....+.|
T Consensus 101 ~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V 180 (279)
T d1q7fa_ 101 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV 180 (279)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCceeecccccccccccceeeeccceeEEeeeccccce
Confidence 88888777532 577899999999888888888898888665322211 2234567889999999988888889999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCC--CCCeeEEEEcCCCCc
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRELPIATLSGH--TRTVSCVAWNPVYHQ 573 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h--~~~V~~v~~sp~~~~ 573 (604)
++||.. ++.+.++....... ....++..++|+++++-+. ++.|.+|+ .+|+.+.++... ......|++.|+ +.
T Consensus 181 ~~~d~~-G~~~~~~g~~g~~~-~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~d-G~ 256 (279)
T d1q7fa_ 181 KVFNYE-GQYLRQIGGEGITN-YPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDD-GS 256 (279)
T ss_dssp EEEETT-CCEEEEESCTTTSC-SEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETT-TE
T ss_pred eeeecC-Cceeeeeccccccc-CCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCC-Cc
Confidence 999964 55666663211111 1222344688987777554 45799998 458877776533 346789999999 66
Q ss_pred EEEEEeCCCcEEEECCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++ ++.+..|++|+.....
T Consensus 257 l~V-~~~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 257 VVL-ASKDYRLYIYRYVQLA 275 (279)
T ss_dssp EEE-EETTTEEEEEECSCCC
T ss_pred EEE-EeCCCeEEEEEeeeec
Confidence 655 4578999999987764
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.03 E-value=3.8e-08 Score=96.99 Aligned_cols=244 Identities=9% Similarity=0.040 Sum_probs=145.2
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEE-eCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV-GPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~-~~d~~~~i~vwd~ 378 (604)
+...+..++|+|++++|.+++. +.+..|.+........ ..... .......++++++++.+... ...+.++|..+.+
T Consensus 38 ~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~-~~~~~-~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~ 114 (365)
T d1jofa_ 38 QDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVH-EASHP-IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEE-EEEEE-CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEE-Eeeec-CCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEc
Confidence 4455677999999998887764 5788888873322211 11111 23346678899999854332 2222235665543
Q ss_pred CCc-------------e---EEEEecCCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcC--CCeeee--e----ecee
Q psy10566 379 ETE-------------L---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIE--GQVLDS--W----EGVR 433 (604)
Q Consensus 379 ~~~-------------~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~--~~~~~~--~----~~~~ 433 (604)
... . ............+.++.|+|+|+++++++. ...|.+|+.. +..... . .+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~g 194 (365)
T d1jofa_ 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred cCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCc
Confidence 221 0 111111123345789999999998888765 3578888763 333211 1 1346
Q ss_pred EEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccc--------------------cCCCCeeEEEECCCCCEEEEEec
Q psy10566 434 VNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLL--------------------QEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~--------------------~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
...++|+|+++++++.. .+++|.+|+.......... ........+.++|+|++++++..
T Consensus 195 Pr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr 274 (365)
T d1jofa_ 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcc
Confidence 88999999999886655 5788999998765332111 01123557899999999988754
Q ss_pred ------CCeEEEEecCCCceeeEee----cc--ccceEEEEeeeCCC-CCcEEEEE-eCCCcEEEEeCCCC
Q psy10566 493 ------TQGVHLWDLRDRILLRKFQ----GV--TQGQFTIHSCFGGA-NQDFVASG-SEDGKVYIWHVKRE 549 (604)
Q Consensus 493 ------dg~I~lwd~~~~~~~~~~~----~~--~~~~~~i~~~~~~~-~~~~l~sg-s~dg~I~iwd~~~~ 549 (604)
.+.|..|++.....+.... .. ...... +.++| +|++|+++ ..++.|.+|+++..
T Consensus 275 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~---i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNA---VSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCC---EEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccE---EEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 2237777776533222111 11 111112 22345 78877666 46799999987654
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.03 E-value=4.4e-07 Score=87.32 Aligned_cols=227 Identities=16% Similarity=0.213 Sum_probs=144.0
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC----CeEEEEEcCC
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR----GQFYQCDIEG 423 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~ 423 (604)
..+..++|.++|+..++-...+ +|+.|+..++.....+. ........++++++|+.+++...+ +.+...+..+
T Consensus 40 ~~lEG~~~D~~G~Ly~~D~~~g--~I~ri~p~g~~~~~~~~-~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~ 116 (319)
T d2dg1a1 40 LQLEGLNFDRQGQLFLLDVFEG--NIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 116 (319)
T ss_dssp CCEEEEEECTTSCEEEEETTTC--EEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred cCcEeCEECCCCCEEEEECCCC--EEEEEECCCCeEEEEEe-CCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCC
Confidence 3456899999998666554555 89999988876554443 234567899999999988776432 3455555544
Q ss_pred Ceeeeee-----ceeEEEEEEcCCCCEEEEEeC------CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEE-e
Q psy10566 424 QVLDSWE-----GVRVNCLWCRSDGKSVLAADT------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN-V 491 (604)
Q Consensus 424 ~~~~~~~-----~~~v~~l~~s~~g~~l~~~~~------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~ 491 (604)
..+.... ....+.+++.++|+..++... .+.+..++............-...+.++|+|+++.|+++ +
T Consensus 117 ~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~ 196 (319)
T d2dg1a1 117 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET 196 (319)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred ceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecc
Confidence 4333222 235788999999986655432 133555555443333333333456789999999876555 5
Q ss_pred cCCeEEEEecCCC-ceeeEeec----cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC------CCC
Q psy10566 492 STQGVHLWDLRDR-ILLRKFQG----VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG------HTR 560 (604)
Q Consensus 492 ~dg~I~lwd~~~~-~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~------h~~ 560 (604)
..+.|+.||+... ........ .........-+....+|++.++....+.|.+||. .|+.+..+.. +..
T Consensus 197 ~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~ 275 (319)
T d2dg1a1 197 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHML 275 (319)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSC
T ss_pred cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCc
Confidence 6789999998643 21111110 0000001122344688998888888999999995 6888887753 344
Q ss_pred CeeEEEEcCCCCcEEEEE
Q psy10566 561 TVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 561 ~V~~v~~sp~~~~~l~s~ 578 (604)
.+++++|.|....++++.
T Consensus 276 ~~~~~~~~~~~~~~~~t~ 293 (319)
T d2dg1a1 276 RSTHPQFIPGTNQLIICS 293 (319)
T ss_dssp BCCEEEECTTSCEEEEEE
T ss_pred eeeeEEEeCCCCEEEEEc
Confidence 678999999844444444
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=2.7e-07 Score=86.18 Aligned_cols=209 Identities=18% Similarity=0.213 Sum_probs=131.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCC---eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDT---TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg---~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
...+.+..+...+...+|||||+.||...... .+.+.+.. ... ...+..+...+....|+|+|+.++.....
T Consensus 29 ~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~spdg~~i~~~~~~ 103 (269)
T d2hqsa1 29 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA--NGA---VRQVASFPRHNGAPAFSPDGSKLAFALSK 103 (269)
T ss_dssp CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--TCC---EEEEECCSSCEEEEEECTTSSEEEEEECT
T ss_pred CCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecc--cCc---eeEEeeeecccccceecCCCCeeeEeeec
Confidence 34455556678889999999999998765433 34444444 222 23444567788899999999999887654
Q ss_pred C-ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCC--eEEEEEcCCCeeeeee--ceeEEEEEEcCC
Q psy10566 369 D-CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRG--QFYQCDIEGQVLDSWE--GVRVNCLWCRSD 442 (604)
Q Consensus 369 ~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg--~i~iwd~~~~~~~~~~--~~~v~~l~~s~~ 442 (604)
. ...+..+............ .........+++++..++..+ .+| .|...++.+....... ........++|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spd 181 (269)
T d2hqsa1 104 TGSLNLYVMDLASGQIRQVTD--GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSD 181 (269)
T ss_dssp TSSCEEEEEETTTCCEEECCC--CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTT
T ss_pred CCccceeecccccccceeeee--ccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccc
Confidence 3 1234444444333333322 334455667777777655544 444 4555666544333332 235667789999
Q ss_pred CCEEEEEeCCC---eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecCCCceee
Q psy10566 443 GKSVLAADTHH---RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLRDRILLR 508 (604)
Q Consensus 443 g~~l~~~~~dg---~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~ 508 (604)
++.++..+.++ .+.+.+...... .............|+|||+.|+..+.. ..++++++..+...+
T Consensus 182 g~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~ 252 (269)
T d2hqsa1 182 GKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 252 (269)
T ss_dssp SSEEEEEEECSSCEEEEEEETTTCCE-EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred cceeEEEeecCCceeeeEeecccccc-eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE
Confidence 99988876654 355555554433 344455667788999999998876653 358899998765433
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.93 E-value=7.6e-07 Score=85.60 Aligned_cols=232 Identities=10% Similarity=0.037 Sum_probs=149.5
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--CceEEEEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--DCHELWVWN 377 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--~~~~i~vwd 377 (604)
....+..++|.++|++.++-...+.|..|+.+ . ......+.........+++++||+.+++...+ ....+...+
T Consensus 38 ~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~--g--~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~ 113 (319)
T d2dg1a1 38 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE--T--KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 113 (319)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTT--T--CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred CCcCcEeCEECCCCCEEEEECCCCEEEEEECC--C--CeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEc
Confidence 34456789999999977777788888888876 2 22223333455678899999999877765432 222566666
Q ss_pred CCCceEEEEecC-CCCCCeEEEEEecCCCEEEEEec------CCeEEEEEcCCCeeeeeec--eeEEEEEEcCCCCEEEE
Q psy10566 378 IETELLRVKLNH-SPEDSLTSCSWNRDGTKFVCGGI------RGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 378 ~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~--~~v~~l~~s~~g~~l~~ 448 (604)
..++........ ........+++.++|+..++... .+.+..++.+++.+..... ...+.++|+++++.++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyv 193 (319)
T d2dg1a1 114 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWV 193 (319)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEE
T ss_pred CCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEE
Confidence 666654444332 22345788999999987766432 2346666777765544332 24678999999987655
Q ss_pred E-eCCCeEEEEEcCCCcccc---------cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc---
Q psy10566 449 A-DTHHRIRTYNFEHLTDSN---------LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ--- 515 (604)
Q Consensus 449 ~-~~dg~I~i~d~~~~~~~~---------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~--- 515 (604)
+ +..+.|..|++....... ..........++++++|++.++....+.|.+||. .++.+..+.....
T Consensus 194 ad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~ 272 (319)
T d2dg1a1 194 TETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEG 272 (319)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGT
T ss_pred ecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCC
Confidence 5 567899999986432111 0111233567999999998888888999999995 6888777753321
Q ss_pred ceEEEEeeeCCCCCcEEEEEe
Q psy10566 516 GQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs 536 (604)
......++.+.+++..+++.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~t~ 293 (319)
T d2dg1a1 273 HMLRSTHPQFIPGTNQLIICS 293 (319)
T ss_dssp CSCBCCEEEECTTSCEEEEEE
T ss_pred cCceeeeEEEeCCCCEEEEEc
Confidence 111223344456655555444
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=1.5e-07 Score=95.77 Aligned_cols=284 Identities=10% Similarity=0.036 Sum_probs=161.4
Q ss_pred cEEEEEEcCCCCeEEEEE---------CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 303 EVWFCKFSPDGLKLATGS---------KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs---------~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.+....|||||++++... ..+.+.++|+. ++....+.........+....|||||+.++..... .|
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~--~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~---nl 136 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP--HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFEN---NI 136 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS--SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETT---EE
T ss_pred ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEcc--CCceeeccCccCCccccceeeeccCCceEEEEecc---eE
Confidence 566788999999887763 35778899998 33333333333344567778999999999988765 49
Q ss_pred EEEECCCceEEEEecCCCCCCe-----------------EEEEEecCCCEEEEEecC-C---------------------
Q psy10566 374 WVWNIETELLRVKLNHSPEDSL-----------------TSCSWNRDGTKFVCGGIR-G--------------------- 414 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~d-g--------------------- 414 (604)
++.+..++..+.....+....| .++.|+|||++|+....| .
T Consensus 137 ~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~ 216 (465)
T d1xfda1 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY 216 (465)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred EEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeee
Confidence 9999888776555543332222 467899999999986532 2
Q ss_pred ------------eEEEEEcCCCeeeee---------eceeEEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCcccccc
Q psy10566 415 ------------QFYQCDIEGQVLDSW---------EGVRVNCLWCRSDGKSVLAADTH----HRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 415 ------------~i~iwd~~~~~~~~~---------~~~~v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~~~~~~~ 469 (604)
.+.++|+++...... ..+-+..+.|+++++.++..... ..+.++|..++....+.
T Consensus 217 ~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~ 296 (465)
T d1xfda1 217 HYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (465)
T ss_dssp ECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred eccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEE
Confidence 233444432211110 01236678899998866554332 25888898887665544
Q ss_pred cC--CCC----eeEEEECCCCCEEEE---EecCC--eEEEEecC------CCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 470 QE--DHP----VMSFTIDATDRLALL---NVSTQ--GVHLWDLR------DRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 470 ~~--~~~----i~~~~~s~~~~~l~~---~~~dg--~I~lwd~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
.. ... -....|+++|+.++. ...+| .++.+++. .+..++.+....-.+..+ ..+..+++.|
T Consensus 297 ~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i--~~~d~~~~~v 374 (465)
T d1xfda1 297 EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKI--LAYDEKGNKI 374 (465)
T ss_dssp EEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEE--EEEETTTTEE
T ss_pred EEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEE--EEEcCCCCEE
Confidence 32 221 234678999985432 22333 34444332 223333333222223333 2334555444
Q ss_pred -EEEeCCC----cEEEEeCCCCcceEEee---CCCCCeeEEEEcCCCCcEEEEEeC--CCcEEEECCCCCC
Q psy10566 533 -ASGSEDG----KVYIWHVKRELPIATLS---GHTRTVSCVAWNPVYHQMIASVSD--DCTVRIWGPHLNT 593 (604)
Q Consensus 533 -~sgs~dg----~I~iwd~~~~~~~~~l~---~h~~~V~~v~~sp~~~~~l~s~s~--Dg~I~iW~~~~~~ 593 (604)
+++..++ .++--++..+.....+. ........+.|||++..++.+++. --.+.+++..+++
T Consensus 375 yF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~ 445 (465)
T d1xfda1 375 YFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKK 445 (465)
T ss_dssp EEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCC
T ss_pred EEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCC
Confidence 4554432 24444444333322222 234467899999995444444443 2457777765554
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.90 E-value=5.7e-07 Score=85.83 Aligned_cols=233 Identities=12% Similarity=0.005 Sum_probs=148.7
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
+.+..+... ..+..++++|||+.+++...++ +|+.|+........ . .....+.+++|.++|+.+++...++.+.
T Consensus 19 ~v~~~~p~~-~~~e~iAv~pdG~l~vt~~~~~--~I~~i~p~g~~~~~-~--~~~~~~~gla~~~dG~l~v~~~~~~~~~ 92 (302)
T d2p4oa1 19 KIITSFPVN-TFLENLASAPDGTIFVTNHEVG--EIVSITPDGNQQIH-A--TVEGKVSGLAFTSNGDLVATGWNADSIP 92 (302)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTT--EEEEECTTCCEEEE-E--ECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred cEEEECCCC-CCcCCEEECCCCCEEEEeCCCC--EEEEEeCCCCEEEE-E--cCCCCcceEEEcCCCCeEEEecCCceEE
Confidence 334445432 3578999999999888877777 89999876543332 2 2346789999999999999988888888
Q ss_pred EEEcC---CCeeeee---eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-----------cCCCCeeEEEE
Q psy10566 418 QCDIE---GQVLDSW---EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-----------QEDHPVMSFTI 480 (604)
Q Consensus 418 iwd~~---~~~~~~~---~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-----------~~~~~i~~~~~ 480 (604)
.++.. +...... .....+.+++.++++.+++.+.++.+..+|.......... ........+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~ 172 (302)
T d2p4oa1 93 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKR 172 (302)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE
T ss_pred EEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccc
Confidence 88763 2222211 1235788999999999888888999999888765322111 11223455666
Q ss_pred CCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc-eEEeeCCC
Q psy10566 481 DATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP-IATLSGHT 559 (604)
Q Consensus 481 s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~-~~~l~~h~ 559 (604)
+. +.++++.+..+.|+.+++................ ....+.+.++|++.++...++.|..++...... +......-
T Consensus 173 ~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~ 250 (302)
T d2p4oa1 173 FG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQT-NIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGV 250 (302)
T ss_dssp ET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESC-CCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTC
T ss_pred cC-CceeeecCCCCeEEeccccccccccccccccCCC-CCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCC
Confidence 53 3455566678889989887643322211100000 112244468999888888899999998763321 22233334
Q ss_pred CCeeEEEE---cCCCCcEEEEEe
Q psy10566 560 RTVSCVAW---NPVYHQMIASVS 579 (604)
Q Consensus 560 ~~V~~v~~---sp~~~~~l~s~s 579 (604)
..+++++| ++| ++.|+.++
T Consensus 251 ~~pt~vafg~~~~D-~~~Lyvtt 272 (302)
T d2p4oa1 251 IGSTAVAFGQTEGD-CTAIYVVT 272 (302)
T ss_dssp TTEEEEEECCSTTT-TTEEEEEE
T ss_pred CCceEEEEcCCCCC-CCEEEEEC
Confidence 56899999 666 45454433
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.76 E-value=1.3e-05 Score=75.80 Aligned_cols=222 Identities=13% Similarity=0.059 Sum_probs=144.3
Q ss_pred EEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-
Q psy10566 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE- 430 (604)
Q Consensus 352 ~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~- 430 (604)
+..|.+.+..|.-....+ ++|+.||..++...... ....+.++++.++|.++++ +.+ .+..+|.....+..+.
T Consensus 22 gp~wd~~~~~l~wvDi~~-~~I~r~d~~~g~~~~~~---~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~ 95 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILE-RELHELHLASGRKTVHA---LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAE 95 (295)
T ss_dssp EEEEETTTTEEEEEEGGG-TEEEEEETTTTEEEEEE---CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEEC
T ss_pred CCeEECCCCEEEEEECCC-CEEEEEECCCCeEEEEE---CCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEee
Confidence 456887665555554333 38999999988754322 2356889999999876665 444 5888998644333332
Q ss_pred ------ceeEEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEE
Q psy10566 431 ------GVRVNCLWCRSDGKSVLAADTH----HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLW 499 (604)
Q Consensus 431 ------~~~v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lw 499 (604)
..+++.+.+.++|+..++.... +.-.+|.+..++.......-.....++++++++.++.+. ..+.|+.|
T Consensus 96 ~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~ 175 (295)
T d2ghsa1 96 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRV 175 (295)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred eecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEe
Confidence 2378999999999976665432 344566665555444444445567899999998766554 57789998
Q ss_pred ecCCCc--e---eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc-CCCCc
Q psy10566 500 DLRDRI--L---LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN-PVYHQ 573 (604)
Q Consensus 500 d~~~~~--~---~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s-p~~~~ 573 (604)
++.... . ...+............+....+|++.++.-..|.|..||. .|+.+..+.-....+++++|- |+...
T Consensus 176 ~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~ 254 (295)
T d2ghsa1 176 PLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASR 254 (295)
T ss_dssp EBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCE
T ss_pred eecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCE
Confidence 875321 1 1111111111112223344688888887777889999995 688888888766779999995 56456
Q ss_pred EEEEEeC
Q psy10566 574 MIASVSD 580 (604)
Q Consensus 574 ~l~s~s~ 580 (604)
+++|...
T Consensus 255 LyvTta~ 261 (295)
T d2ghsa1 255 LLVTSAR 261 (295)
T ss_dssp EEEEEBC
T ss_pred EEEEECC
Confidence 7776554
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=6.5e-07 Score=90.87 Aligned_cols=279 Identities=14% Similarity=0.148 Sum_probs=160.1
Q ss_pred EEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCC-------CceEEEEEECC
Q psy10566 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPE-------DCHELWVWNIE 379 (604)
Q Consensus 308 ~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d-------~~~~i~vwd~~ 379 (604)
.|.+++.++.. ..+|.|.+||+.. +....+..... ....+....||||+++++....- ..+.++++|+.
T Consensus 23 ~W~~~~~~~~~-~~~g~i~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~ 99 (465)
T d1xfda1 23 KWISDTEFIYR-EQKGTVRLWNVET--NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (465)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGG--CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred EEeCCCcEEEE-eCCCcEEEEECCC--CCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEcc
Confidence 57788876654 4578899999982 22222222111 23467788999999998876531 12378999999
Q ss_pred CceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeee-ce-------------------eEEEE
Q psy10566 380 TELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWE-GV-------------------RVNCL 437 (604)
Q Consensus 380 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~-~~-------------------~v~~l 437 (604)
++....... ......+....|+|||+.+|... ++.+.+.+..+ ..++... +. .-..+
T Consensus 100 ~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~ 178 (465)
T d1xfda1 100 HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAH 178 (465)
T ss_dssp SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEE
T ss_pred CCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceE
Confidence 987544322 12334566789999999988765 56788877643 2222211 10 12578
Q ss_pred EEcCCCCEEEEEeCC-C---------------------------------eEEEEEcCCCccccccc-------CCCCee
Q psy10566 438 WCRSDGKSVLAADTH-H---------------------------------RIRTYNFEHLTDSNLLQ-------EDHPVM 476 (604)
Q Consensus 438 ~~s~~g~~l~~~~~d-g---------------------------------~I~i~d~~~~~~~~~~~-------~~~~i~ 476 (604)
.|||||+.|+....| . .+.++|+.+........ ...-+.
T Consensus 179 ~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~ 258 (465)
T d1xfda1 179 WWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYIT 258 (465)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEE
T ss_pred EECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceee
Confidence 899999999886432 1 34556665443221111 122367
Q ss_pred EEEECCCCCEEEEEecC----CeEEEEecCCCceeeEeeccccc-eE-EEEeeeCCCCCcEEE--EEe-CCC--cEEEEe
Q psy10566 477 SFTIDATDRLALLNVST----QGVHLWDLRDRILLRKFQGVTQG-QF-TIHSCFGGANQDFVA--SGS-EDG--KVYIWH 545 (604)
Q Consensus 477 ~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~~~~~~~~~~~~-~~-~i~~~~~~~~~~~l~--sgs-~dg--~I~iwd 545 (604)
.+.|+++++.++..... ..+.++|..+++....+...... +. .-....++++|+.++ ..+ .+| .++..+
T Consensus 259 ~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~ 338 (465)
T d1xfda1 259 MVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHIT 338 (465)
T ss_dssp EEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEE
T ss_pred eeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEE
Confidence 78999998866654432 24888999998776555432211 00 001134457776332 222 233 333333
Q ss_pred CC------CCcceEEeeCCCCCeeEE-EEcCCCCcEEEEEeCCC--cEEEECCC
Q psy10566 546 VK------RELPIATLSGHTRTVSCV-AWNPVYHQMIASVSDDC--TVRIWGPH 590 (604)
Q Consensus 546 ~~------~~~~~~~l~~h~~~V~~v-~~sp~~~~~l~s~s~Dg--~I~iW~~~ 590 (604)
+. .++.+..+....-.|..+ +|+++++.+.+++..++ .-.+|.++
T Consensus 339 ~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~ 392 (465)
T d1xfda1 339 VSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (465)
T ss_dssp EECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred eccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEE
Confidence 21 234444454444456665 68888556666666543 33455543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.63 E-value=2.2e-06 Score=80.20 Aligned_cols=232 Identities=11% Similarity=0.068 Sum_probs=127.9
Q ss_pred EEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC----CceEEEEEECCCc
Q psy10566 308 KFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE----DCHELWVWNIETE 381 (604)
Q Consensus 308 ~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d----~~~~i~vwd~~~~ 381 (604)
..||| |+.+|..+ +|.|.+.|+. .+. ...+..+...+...+|||||+.|+..... ....|++++..++
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~--~g~---~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g 78 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLK--SGS---TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETT--TCC---EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECC--CCC---EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC
Confidence 45788 99888765 5677777887 322 24456677788999999999999876432 2235889999888
Q ss_pred eEEEEecCC-----CCCCeEEEEEecCCCEEEEEecC------CeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEe
Q psy10566 382 LLRVKLNHS-----PEDSLTSCSWNRDGTKFVCGGIR------GQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 382 ~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~ 450 (604)
......... .........|+|+|+.++..... ..+...+.++...............+.+.+..+....
T Consensus 79 ~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (281)
T d1k32a2 79 EIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNT 158 (281)
T ss_dssp EEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESC
T ss_pred ceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEeec
Confidence 765543211 12345678999999998875432 2345556555544433332222333333333222222
Q ss_pred CCC-----------eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeEeeccccce
Q psy10566 451 THH-----------RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRKFQGVTQGQ 517 (604)
Q Consensus 451 ~dg-----------~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~~~~~~~~~ 517 (604)
... ..........................++++. .+..... ...|+++|+.++...+ +......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~~-lt~~~~~- 235 (281)
T d1k32a2 159 FELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRK-HTSFTDY- 235 (281)
T ss_dssp SCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEE-CCCCCSS-
T ss_pred cccceeeeeccCCcceeeeeccccceeeccCCccccceeeeeccc-cceecccccccceEEEeCCCCceEE-eecCCCc-
Confidence 111 1111111111112222223333444454442 2222222 2358888887765443 3222221
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
.+ ..++|+|+.|+.. .++.|+++|+.+++..
T Consensus 236 -~~--~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~ 266 (281)
T d1k32a2 236 -YP--RHLNTDGRRILFS-KGGSIYIFNPDTEKIE 266 (281)
T ss_dssp -CE--EEEEESSSCEEEE-ETTEEEEECTTTCCEE
T ss_pred -cc--ccCcCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence 11 1246899887764 4788999999988754
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.44 E-value=3.3e-05 Score=71.69 Aligned_cols=224 Identities=13% Similarity=0.129 Sum_probs=119.4
Q ss_pred EECCC--CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-C-----CeEEEEEcCCCe
Q psy10566 354 AWSPD--SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-R-----GQFYQCDIEGQV 425 (604)
Q Consensus 354 ~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-----g~i~iwd~~~~~ 425 (604)
..+|| |+.++..+.+ .|++.|+.+++...... +...+...+|+|||+.|+.... + ..|.+++..+..
T Consensus 5 ~~sPdi~G~~v~f~~~~---dl~~~d~~~g~~~~Lt~--~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~ 79 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCCD---DLWEHDLKSGSTRKIVS--NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE 79 (281)
T ss_dssp CEEEEEETTEEEEEETT---EEEEEETTTCCEEEEEC--SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred ccCCCCCCCEEEEEeCC---cEEEEECCCCCEEEEec--CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc
Confidence 35788 9998887655 49999999988654433 4466888999999999986543 2 246777776555
Q ss_pred eeeeece---------eEEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEE
Q psy10566 426 LDSWEGV---------RVNCLWCRSDGKSVLAADTH------HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 426 ~~~~~~~---------~v~~l~~s~~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 490 (604)
...+... ......++|+|+.++..... ..+...+......... .........+.+.+..++..
T Consensus 80 ~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 157 (281)
T d1k32a2 80 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL--NLGPATHILFADGRRVIGRN 157 (281)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC--CSCSCSEEEEETTEEEEEES
T ss_pred eEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe--cCCccceeeecCCCeEEEee
Confidence 4444221 34677899999998876442 2344555444332211 12222233333333333332
Q ss_pred ecCC-----------eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC--CcEEEEeCCCCcceEEeeC
Q psy10566 491 VSTQ-----------GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED--GKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 491 ~~dg-----------~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d--g~I~iwd~~~~~~~~~l~~ 557 (604)
.... ....+................ .... ...++ ..+.....+ ..|+++|+.+++. ..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~-~~~~~~~~~~~~~l~~~d~~g~~~-~~lt~ 231 (281)
T d1k32a2 158 TFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTH-VSSP---VIVGH-RIYFITDIDGFGQIYSTDLDGKDL-RKHTS 231 (281)
T ss_dssp CSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSC-CEEE---EEETT-EEEEEECTTSSCEEEEEETTSCSC-EECCC
T ss_pred ccccceeeeeccCCcceeeeeccccceeeccCCccc-ccee---eeecc-ccceecccccccceEEEeCCCCce-EEeec
Confidence 2211 111112112211111111111 1111 11122 233333333 3578888876654 34433
Q ss_pred CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 558 HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 558 h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.. .....|+|++..++++ .++.|.++|+++++
T Consensus 232 ~~~-~~~~~~SpDG~~I~f~--~~~~l~~~d~~~g~ 264 (281)
T d1k32a2 232 FTD-YYPRHLNTDGRRILFS--KGGSIYIFNPDTEK 264 (281)
T ss_dssp CCS-SCEEEEEESSSCEEEE--ETTEEEEECTTTCC
T ss_pred CCC-cccccCcCCCCEEEEE--eCCEEEEEECCCCC
Confidence 322 2334689995444443 36789999998876
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.43 E-value=0.00014 Score=68.42 Aligned_cols=216 Identities=14% Similarity=0.134 Sum_probs=140.1
Q ss_pred EEEEcCC-CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEE
Q psy10566 306 FCKFSPD-GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLR 384 (604)
Q Consensus 306 ~v~fspd-g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~ 384 (604)
+..|++. +.+..+--..+.|.-||.. ++.. ..+. ....+.++++.++|..+++ +.++ +..+|..+++..
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~--~g~~---~~~~-~~~~~~~i~~~~dg~l~va-~~~g---l~~~d~~tg~~~ 91 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLA--SGRK---TVHA-LPFMGSALAKISDSKQLIA-SDDG---LFLRDTATGVLT 91 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETT--TTEE---EEEE-CSSCEEEEEEEETTEEEEE-ETTE---EEEEETTTCCEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECC--CCeE---EEEE-CCCCcEEEEEecCCCEEEE-EeCc---cEEeecccceee
Confidence 4568774 4444444467889889877 3222 1222 3456889999999876665 5554 999999998765
Q ss_pred EEecCC---CCCCeEEEEEecCCCEEEEEecC----CeEEEEEc-CCCeeeeeece-eEEEEEEcCCCCEEEEEe-CCCe
Q psy10566 385 VKLNHS---PEDSLTSCSWNRDGTKFVCGGIR----GQFYQCDI-EGQVLDSWEGV-RVNCLWCRSDGKSVLAAD-THHR 454 (604)
Q Consensus 385 ~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~-~dg~ 454 (604)
...... ....+..+.+.|+|+..++...+ +.-.+|.+ +++......+. ..+.++++++++.++.+. ..+.
T Consensus 92 ~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~ 171 (295)
T d2ghsa1 92 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 171 (295)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred EEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccce
Confidence 443321 22357889999999877765432 23455555 34443333333 467899999999766554 5678
Q ss_pred EEEEEcCCCcc------cccc---cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC
Q psy10566 455 IRTYNFEHLTD------SNLL---QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525 (604)
Q Consensus 455 I~i~d~~~~~~------~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~ 525 (604)
|..|++..... .... ........++++.+|++.++....+.|..||. +++.+..+.-.... ...++|.
T Consensus 172 I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~--~T~~~FG 248 (295)
T d2ghsa1 172 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ--TTCPAFI 248 (295)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB--EEEEEEE
T ss_pred eeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCc--eEEEEEe
Confidence 99998753211 1111 12445778999999998888778899999995 67788887765443 2334666
Q ss_pred CCCCcEEEE
Q psy10566 526 GANQDFVAS 534 (604)
Q Consensus 526 ~~~~~~l~s 534 (604)
.++.+.|+.
T Consensus 249 G~d~~~Lyv 257 (295)
T d2ghsa1 249 GPDASRLLV 257 (295)
T ss_dssp STTSCEEEE
T ss_pred CCCCCEEEE
Confidence 777665543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=98.09 E-value=0.00028 Score=68.76 Aligned_cols=270 Identities=10% Similarity=0.007 Sum_probs=145.1
Q ss_pred EEEEEcCCCCeEEEEECCC-----------eEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 305 WFCKFSPDGLKLATGSKDT-----------TVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 305 ~~v~fspdg~~lasgs~dg-----------~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
.......+|+.++.|+.+. .+.+||.... +....... ..|.......++.+++..++.++.+. ..
T Consensus 23 ~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~--~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~-~~ 99 (387)
T d1k3ia3 23 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG--IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-KK 99 (387)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC--CBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-TC
T ss_pred EEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCC--cEeecCCCCCCcccceeEEEEecCCcEEEeecCCC-cc
Confidence 3445567888888887431 3778998833 33332222 22333345678899999888887664 37
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC------CeEEEEEcCCCeeeeeece--------------
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR------GQFYQCDIEGQVLDSWEGV-------------- 432 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~-------------- 432 (604)
+.+||..+......-.......-.+++..+||+.++.|+.+ ..+.+||............
T Consensus 100 ~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 179 (387)
T d1k3ia3 100 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 179 (387)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred eeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCccccccccccccee
Confidence 99999998876543322222334567778899999998753 3688999866544433211
Q ss_pred ---eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-------C--CCCeeEEE-ECCCCCEEEEEecCC-----
Q psy10566 433 ---RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-------E--DHPVMSFT-IDATDRLALLNVSTQ----- 494 (604)
Q Consensus 433 ---~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------~--~~~i~~~~-~s~~~~~l~~~~~dg----- 494 (604)
....+...++|+.++.+...+.+.+++..+........ . ...-.++. ...+++.++.|+...
T Consensus 180 ~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~ 259 (387)
T d1k3ia3 180 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 259 (387)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred eccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCc
Confidence 01123344567777777777777777776543221110 0 11112222 234566666665421
Q ss_pred ---eEEEEecCCCce---ee-EeeccccceEEEEeeeCCCCCcEEEEEeCC-----------CcEEEEeCCCCcceEEee
Q psy10566 495 ---GVHLWDLRDRIL---LR-KFQGVTQGQFTIHSCFGGANQDFVASGSED-----------GKVYIWHVKRELPIATLS 556 (604)
Q Consensus 495 ---~I~lwd~~~~~~---~~-~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----------g~I~iwd~~~~~~~~~l~ 556 (604)
...+.++..... .. ..............+. .+++++++.|+.+ ..+.+||..+.+- ..+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W-~~~~ 337 (387)
T d1k3ia3 260 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVV-LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF-YKQN 337 (387)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEE-CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE-EECC
T ss_pred ccceeecccccccccCCCceeeccccccccccceeee-ccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeE-EECC
Confidence 233333322111 11 1110000100111122 3788999998853 1478899876542 2221
Q ss_pred CC---CCCeeEEEEcCCCCcEEEEEeC
Q psy10566 557 GH---TRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 557 ~h---~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
.. ...-......+| +++++.|+.
T Consensus 338 ~~~~~R~~Hs~a~l~~d-G~v~v~GG~ 363 (387)
T d1k3ia3 338 PNSIVRVYHSISLLLPD-GRVFNGGGG 363 (387)
T ss_dssp CCSSCCCTTEEEEECTT-SCEEEEECC
T ss_pred CCCCcccceEEEEECCC-CEEEEEeCC
Confidence 11 111123345677 788888884
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.95 E-value=0.0065 Score=55.29 Aligned_cols=249 Identities=9% Similarity=0.006 Sum_probs=152.6
Q ss_pred CeEEEEECCCeEEEEEeCCCCce-eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFT-CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
.+|+.+. .+.|+-.+++..... ......+..+...+.+++|.+.++.+.-+.... +.|+..++..+........ ..
T Consensus 2 ~fLl~s~-~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~-~~I~~~~l~g~~~~~v~~~-~~ 78 (263)
T d1npea_ 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISE-PSIGRASLHGGEPTTIIRQ-DL 78 (263)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTT-TEEEEEESSSCCCEEEECT-TC
T ss_pred CEEEEeC-CCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCC-CeEEEEEcccCCcEEEEEe-cc
Confidence 4444443 346766776522111 111222333445678899998888777765544 3899988877655444432 23
Q ss_pred CCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCcc
Q psy10566 393 DSLTSCSWNRDGTKFV-CGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTH---HRIRTYNFEHLTD 465 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~d---g~I~i~d~~~~~~ 465 (604)
..+.++++..-+..+. +-...+.|.+.++++.....+.. ..+..+++.|...+++..... ..|...++.....
T Consensus 79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~ 158 (263)
T d1npea_ 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (263)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence 4688999987666665 44556799999998764433321 368899999987777765433 2455556655444
Q ss_pred ccccc-CCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 466 SNLLQ-EDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 466 ~~~~~-~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
..+.. .-.....+++++.++.|+.+ ...+.|...|+........+.+.. ....+. .+ ++.+.++-...+.|..
T Consensus 159 ~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~-~P~~la--v~--~~~lYwtd~~~~~I~~ 233 (263)
T d1npea_ 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVT--SY--GKNLYYTDWKTNSVIA 233 (263)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC-SEEEEE--EE--TTEEEEEETTTTEEEE
T ss_pred eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCC-CcEEEE--EE--CCEEEEEECCCCEEEE
Confidence 33333 23566899999888877665 456789999987655444444332 223332 22 3445555556788999
Q ss_pred EeCCCCcceEEeeCC-CCCeeEEEEcCC
Q psy10566 544 WHVKRELPIATLSGH-TRTVSCVAWNPV 570 (604)
Q Consensus 544 wd~~~~~~~~~l~~h-~~~V~~v~~sp~ 570 (604)
.|..+++.+..+..+ .....+++..++
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~gi~v~~~ 261 (263)
T d1npea_ 234 MDLAISKEMDTFHPHKQTRLYGITIALS 261 (263)
T ss_dssp EETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EECCCCccceEECCCCCCCcceEEEeCC
Confidence 999988877766433 344556665543
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.88 E-value=0.0084 Score=54.18 Aligned_cols=247 Identities=15% Similarity=0.172 Sum_probs=153.2
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR 402 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 402 (604)
..|.|-|+...... ..+... --+.-.+|..+.|+.-+.. ++.++|+++...+..+. ....|.--.|-.
T Consensus 45 ~~VvIidl~n~~~~--~Rrpi~-----AdsAIMhP~~~IiALrag~---~LQiFnletK~klks~~--~~e~VvfWkWis 112 (327)
T d1utca2 45 AQVVIIDMNDPSNP--IRRPIS-----ADSAIMNPASKVIALKAGK---TLQIFNIEMKSKMKAHT--MTDDVTFWKWIS 112 (327)
T ss_dssp EEEEEEETTSTTSC--EEEECC-----CSEEEECSSSSEEEEEETT---EEEEEETTTTEEEEEEE--CSSCCCEEEESS
T ss_pred ceEEEEECCCCCcc--eecccc-----hhhhhcCCCCcEEEEecCC---eEEEEehhHhhhhceEE--cCCCcEEEEecC
Confidence 46788887632211 111111 2244568888888776633 79999999999888776 335677777775
Q ss_pred CCCEEEEEecCCeEEEEEcCC--Ceeeeeece------eEEEEEEcCCCCEEEEEeC-------CCeEEEEEcCCCcccc
Q psy10566 403 DGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV------RVNCLWCRSDGKSVLAADT-------HHRIRTYNFEHLTDSN 467 (604)
Q Consensus 403 ~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~------~v~~l~~s~~g~~l~~~~~-------dg~I~i~d~~~~~~~~ 467 (604)
+.. |+..+ +..|+-|+++| ...+.+..+ .|.....++++++++..+- .|.+.+|..+......
T Consensus 113 ~~~-L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ 190 (327)
T d1utca2 113 LNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 190 (327)
T ss_dssp SSE-EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE
T ss_pred CCE-EEEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCcc
Confidence 543 33332 46799999954 455555543 6888999999999776532 3678999988765555
Q ss_pred cccCCCCeeEEEECCCC---CEEEEEe---cCCeEEEEecCCCce-eeE---------eeccccceEEEEeeeCCCCCcE
Q psy10566 468 LLQEDHPVMSFTIDATD---RLALLNV---STQGVHLWDLRDRIL-LRK---------FQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 468 ~~~~~~~i~~~~~s~~~---~~l~~~~---~dg~I~lwd~~~~~~-~~~---------~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
+-+|......+.+..+. ..++.+. ..+.+++.++..... -.. +.......+.+.... ++.-..
T Consensus 191 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqv-s~kygi 269 (327)
T d1utca2 191 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-SEKHDV 269 (327)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEE-ETTTTE
T ss_pred ccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEe-eccCCE
Confidence 54443333333222111 1222222 235788888865211 111 112222344554333 456668
Q ss_pred EEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
++.-+.-|.|++||+.++.++..-+-....|...+-+.. ..=++....+|.|.
T Consensus 270 iyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~-~~Gi~~VNr~GqVl 322 (327)
T d1utca2 270 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA-TAGIIGVNRKGQVL 322 (327)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT-TTEEEEEETTSEEE
T ss_pred EEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCC-CceEEEECCCCeEE
Confidence 888899999999999999999888777777776665555 33445555777664
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.86 E-value=0.0094 Score=54.14 Aligned_cols=209 Identities=10% Similarity=-0.037 Sum_probs=135.2
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEE-ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATG-SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasg-s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
.+..+...+..++|.+..+.|.-. ..++.|+..+++ ... ....+......+.++++..-+..|..+.... ..|.
T Consensus 30 ~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~--g~~--~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~-~~I~ 104 (263)
T d1npea_ 30 FLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLH--GGE--PTTIIRQDLGSPEGIALDHLGRTIFWTDSQL-DRIE 104 (263)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESS--SCC--CEEEECTTCCCEEEEEEETTTTEEEEEETTT-TEEE
T ss_pred ccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcc--cCC--cEEEEEeccccccEEEEeccCCeEEEeccCC-CEEE
Confidence 344556678889999877766554 456778888876 211 1222333335688999987677776665543 3899
Q ss_pred EEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC---CeEEEEEcCCCeeeeee--c-eeEEEEEEcCCCCEEEE
Q psy10566 375 VWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---GQFYQCDIEGQVLDSWE--G-VRVNCLWCRSDGKSVLA 448 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~--~-~~v~~l~~s~~g~~l~~ 448 (604)
+.++.......... ..-..+..+++.|...+++..... +.|.-.+++|.....+. + .....+++.+.++.+..
T Consensus 105 ~~~~dg~~~~~l~~-~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw 183 (263)
T d1npea_ 105 VAKMDGTQRRVLFD-TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCW 183 (263)
T ss_dssp EEETTSCSCEEEEC-SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred EEecCCceEEEEec-ccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEE
Confidence 99988665433333 223568899999977776655432 34655677765443332 2 25688999988887766
Q ss_pred Ee-CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 449 AD-THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 449 ~~-~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
+. ..+.|...|+.......+........++++. ++....+-...+.|...|..+++....+.
T Consensus 184 ~d~~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~~~~~ 246 (263)
T d1npea_ 184 VDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (263)
T ss_dssp EETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EeCCCCEEEEEECCCCCeEEEECCCCCcEEEEEE-CCEEEEEECCCCEEEEEECCCCccceEEC
Confidence 64 5678999999876554444443445577775 34444444567889999988887766554
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.76 E-value=0.0089 Score=57.04 Aligned_cols=194 Identities=10% Similarity=0.091 Sum_probs=118.6
Q ss_pred EEEECC---CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCC------------
Q psy10566 352 YLAWSP---DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRG------------ 414 (604)
Q Consensus 352 ~l~~sp---d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg------------ 414 (604)
.+++.. ||+++++..... .+|-+.|+.+.++...+.......+..+...+ +..++++++.+.
T Consensus 89 ~~S~TdGtyDGrylFVNDkan-~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d 167 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKAN-TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 167 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTT-TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccccCCccceeEEEEEcCCC-ceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccc
Confidence 455543 789999888765 48999999999886655444556677777654 556777766532
Q ss_pred ------eEEEEEcCCCee-eee-eceeEEEEEEcCCCCEEEEEeCCC---------------eEEEEE------------
Q psy10566 415 ------QFYQCDIEGQVL-DSW-EGVRVNCLWCRSDGKSVLAADTHH---------------RIRTYN------------ 459 (604)
Q Consensus 415 ------~i~iwd~~~~~~-~~~-~~~~v~~l~~s~~g~~l~~~~~dg---------------~I~i~d------------ 459 (604)
.+..+|.+...+ ... .+.....+.++++|+++++.+.+. .+.+++
T Consensus 168 ~~~y~~~~t~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk 247 (459)
T d1fwxa2 168 VANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 247 (459)
T ss_dssp GG-EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred hhhcceEEEEEecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCC
Confidence 245666643222 211 122456789999999999887431 233343
Q ss_pred -----------cCCCc---ccccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCce--------eeEeecc-cc
Q psy10566 460 -----------FEHLT---DSNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRIL--------LRKFQGV-TQ 515 (604)
Q Consensus 460 -----------~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~--------~~~~~~~-~~ 515 (604)
.+... ....+........+.++|||+++++++. +.++.++|+++-.. ...+.+. .-
T Consensus 248 ~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~el 327 (459)
T d1fwxa2 248 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 327 (459)
T ss_dssp SEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBC
T ss_pred cEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeeccc
Confidence 33211 1112333445667899999999988776 78899999974211 1111111 11
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
+...+...| ...|+-..|---|..|.-|++.
T Consensus 328 glgPLht~f-d~~g~aytslfids~v~kw~~~ 358 (459)
T d1fwxa2 328 GLGPLHTAF-DGRGNAYTSLFLDSQVVKWNIE 358 (459)
T ss_dssp CSCEEEEEE-CTTSEEEEEETTTTEEEEEEHH
T ss_pred CcCcccccc-CCCceEEEEeeccceEEEEecc
Confidence 122344344 4567655566679999999985
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.75 E-value=0.0062 Score=58.15 Aligned_cols=226 Identities=14% Similarity=0.120 Sum_probs=141.5
Q ss_pred EEEEcC---CCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC--CCCCeEEEEeCCCc---------
Q psy10566 306 FCKFSP---DGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS--PDSSHLLVVGPEDC--------- 370 (604)
Q Consensus 306 ~v~fsp---dg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s--pd~~~l~s~~~d~~--------- 370 (604)
.++|.. ||++|+... .++.|-+-|++ ..+...+..+. ....+..++.. |+..|++..+.+..
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~--~fkt~kIi~iP-n~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l 165 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCD--VMKCDAILEIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 165 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETT--TTEEEEEEECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECc--ceeeeEEEecC-CCCCCceeecccCCCeEEEEccCccccccCCCCccc
Confidence 345544 899887765 67789999998 33444444553 34556777764 45667777766431
Q ss_pred -------eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---------------eEEEEEcC------
Q psy10566 371 -------HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---------------QFYQCDIE------ 422 (604)
Q Consensus 371 -------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------------~i~iwd~~------ 422 (604)
+.+.++|..+.+....+... .....+.++++|+++++.+.+. .+.+++..
T Consensus 166 ~d~~~y~~~~t~ID~~tm~V~~QV~V~--g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av 243 (459)
T d1fwxa2 166 EDVANYVNVFTAVDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI 243 (459)
T ss_dssp TCGG-EEEEEEEEETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred cchhhcceEEEEEecCCceEEEEeeeC--CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhh
Confidence 24678999998877776633 3567899999999999887542 23344431
Q ss_pred --CC-------------------eeeeee-ceeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCccc--------c----
Q psy10566 423 --GQ-------------------VLDSWE-GVRVNCLWCRSDGKSVLAADT-HHRIRTYNFEHLTDS--------N---- 467 (604)
Q Consensus 423 --~~-------------------~~~~~~-~~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~~--------~---- 467 (604)
|+ .++.+. +.....+.++|||+++++++. +.++.++|++..... .
T Consensus 244 ~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~ 323 (459)
T d1fwxa2 244 AAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA 323 (459)
T ss_dssp HHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEE
T ss_pred hcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEe
Confidence 11 111110 113456789999999887765 788999999753211 1
Q ss_pred cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC----------ceeeEeeccccceEEEEee--eCCCCCcEEEEE
Q psy10566 468 LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR----------ILLRKFQGVTQGQFTIHSC--FGGANQDFVASG 535 (604)
Q Consensus 468 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~----------~~~~~~~~~~~~~~~i~~~--~~~~~~~~l~sg 535 (604)
.....-.....+|+..|....+-.-|..|.-|++... ..+.++.-|-+........ ...|+|+++++.
T Consensus 324 e~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~ 403 (459)
T d1fwxa2 324 EPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 403 (459)
T ss_dssp CCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred ecccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEe
Confidence 1112344567788888876666678999999998532 3344554433322222111 235899999998
Q ss_pred e
Q psy10566 536 S 536 (604)
Q Consensus 536 s 536 (604)
.
T Consensus 404 n 404 (459)
T d1fwxa2 404 S 404 (459)
T ss_dssp E
T ss_pred c
Confidence 6
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=0.025 Score=51.30 Aligned_cols=235 Identities=7% Similarity=-0.028 Sum_probs=139.1
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce---EEEEecCCCCCCeEEEE
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---LRVKLNHSPEDSLTSCS 399 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~~~~~~v~~~~ 399 (604)
..|+-.+++. .... ..+. ....+.+++|.+..+.+.-+.... ..|...++.... ............+.+++
T Consensus 10 ~~I~~~~l~~--~~~~--~~~~-~~~~~~~id~d~~~~~lYw~D~~~-~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glA 83 (266)
T d1ijqa1 10 HEVRKMTLDR--SEYT--SLIP-NLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 83 (266)
T ss_dssp SSEEEEETTS--CCCE--EEEC-SCSSEEEEEEETTTTEEEEEETTT-TEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred CeEEEEECCC--Ccce--eeeC-CCCceEEEEEEeCCCEEEEEECCC-CEEEEEEecCCCCCcceEEEEeCCCCCcceEE
Confidence 3577778762 2221 1222 445678999999888777765443 367766664321 11111112234577889
Q ss_pred EecCCCEEEEE-ecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCccccccc-CC
Q psy10566 400 WNRDGTKFVCG-GIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAAD--THHRIRTYNFEHLTDSNLLQ-ED 472 (604)
Q Consensus 400 ~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~--~dg~I~i~d~~~~~~~~~~~-~~ 472 (604)
+.+.+..+..+ ...+.|.+++++|....... ......+++.|...+++... ..+.|...++.......+.. .-
T Consensus 84 vD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~ 163 (266)
T d1ijqa1 84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 163 (266)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred EeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccccccc
Confidence 98766655554 45678999999876543322 23678899998766666554 34567777776654444443 23
Q ss_pred CCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 473 HPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 473 ~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
.....+++++.++.|+.+ ...+.|...|+........................ ++.+.++-..++.|+..+..+++.
T Consensus 164 ~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~~ 241 (266)
T d1ijqa1 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 241 (266)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred ceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEEECCCCcc
Confidence 567899999988777666 45678999998765443333332221112221221 344555555678888888888877
Q ss_pred eEEeeCCCCCeeEE
Q psy10566 552 IATLSGHTRTVSCV 565 (604)
Q Consensus 552 ~~~l~~h~~~V~~v 565 (604)
...+......+.++
T Consensus 242 ~~~~~~~~~~p~~i 255 (266)
T d1ijqa1 242 VNLLAENLLSPEDM 255 (266)
T ss_dssp CEEEECSCSCCCCE
T ss_pred eEEEEcCCCCceEE
Confidence 77666544433333
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=0.031 Score=50.68 Aligned_cols=210 Identities=7% Similarity=-0.060 Sum_probs=129.7
Q ss_pred CCCcEEEEEEcCCCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
....+..++|.+..+.|.-.. .++.|.-.+++...........+......+..+++.+.+..|..+.... .+|.+.++
T Consensus 28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~-~~I~v~~~ 106 (266)
T d1ijqa1 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-GTVSVADT 106 (266)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT-TEEEEEET
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCC-CEEEeEec
Confidence 445678899998877665543 4566766666521111222223333345677889887777776665544 38999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEe--cCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEE-eCC
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG--IRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAA-DTH 452 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~-~~d 452 (604)
.......... ........++++|...++.... ..+.|.-.+++|.....+.. .....+++.+.++.+..+ ...
T Consensus 107 ~g~~~~~~~~-~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~ 185 (266)
T d1ijqa1 107 KGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 185 (266)
T ss_dssp TSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEEc-CCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCc
Confidence 8766544443 3345678999999666655543 34578888888765555432 257889999988877766 446
Q ss_pred CeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 453 HRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
+.|...++........... .....++++. .+....+-..++.|...+..++.....+..
T Consensus 186 ~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g~~~~~~~~ 247 (266)
T d1ijqa1 186 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (266)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEECCCCcceEEEEc
Confidence 7899999876544333322 2334566665 333444444667788888777765554443
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.44 E-value=0.038 Score=49.76 Aligned_cols=201 Identities=13% Similarity=0.209 Sum_probs=132.2
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-EEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-LRV 385 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-~~~ 385 (604)
.-.+|..+.||.-+ ..++.|+|++ ..+.++.+.- ..+|..-.|-.+. .|+..+.. .|+-|+++... +..
T Consensus 68 AIMhP~~~IiALra-g~~LQiFnle----tK~klks~~~-~e~VvfWkWis~~-~L~lVT~t---aVYHW~~~g~s~P~k 137 (327)
T d1utca2 68 AIMNPASKVIALKA-GKTLQIFNIE----MKSKMKAHTM-TDDVTFWKWISLN-TVALVTDN---AVYHWSMEGESQPVK 137 (327)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETT----TTEEEEEEEC-SSCCCEEEESSSS-EEEEECSS---EEEEEESSSSCCCEE
T ss_pred hhcCCCCcEEEEec-CCeEEEEehh----HhhhhceEEc-CCCcEEEEecCCC-EEEEEcCC---ceEEEcccCCCCchh
Confidence 45678888887765 5689999998 4444555543 4567778887554 56666655 59999996543 333
Q ss_pred EecCC---CCCCeEEEEEecCCCEEEEEec-------CCeEEEEEcCCCeeeeeeceeEEEEEEcCCCC----EEEE-E-
Q psy10566 386 KLNHS---PEDSLTSCSWNRDGTKFVCGGI-------RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGK----SVLA-A- 449 (604)
Q Consensus 386 ~~~~~---~~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~----~l~~-~- 449 (604)
.+... ....|..-..+++.++++..+- .|.+.+|..+.+.-+.+++|...-..+.-+|+ .+++ +
T Consensus 138 ~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 217 (327)
T d1utca2 138 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 217 (327)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred hhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccccceeeeeEEEEcCCCCCCceEEEEEE
Confidence 33321 1345777778888998776542 36788999999988888888555444433332 1222 2
Q ss_pred --eCCCeEEEEEcCCCccc-c--------c-ccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 450 --DTHHRIRTYNFEHLTDS-N--------L-LQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 450 --~~dg~I~i~d~~~~~~~-~--------~-~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
...+++++.++...... . + +.. ..-..++.+++....++.-+.-|.|++||+.++.++..-.-..
T Consensus 218 r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~ 297 (327)
T d1utca2 218 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 297 (327)
T ss_dssp EETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred CCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCC
Confidence 22368999998763211 1 0 111 2334578888888899999999999999999998886655444
Q ss_pred cce
Q psy10566 515 QGQ 517 (604)
Q Consensus 515 ~~~ 517 (604)
..+
T Consensus 298 ~~i 300 (327)
T d1utca2 298 ETI 300 (327)
T ss_dssp SCE
T ss_pred Cce
Confidence 433
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.36 E-value=0.079 Score=51.62 Aligned_cols=244 Identities=7% Similarity=0.049 Sum_probs=131.3
Q ss_pred CCCeeEEEECCCCCeEEEEeCCC---ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC----------
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPED---CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---------- 413 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------- 413 (604)
.-.+...++|||+++++.+-..+ ...++++|+.+++.+..... ......++|.+|++.|+....+
T Consensus 124 ~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~--~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~ 201 (430)
T d1qfma1 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (430)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred cceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc--cccccceEEcCCCCEEEEEEeccccCcccccc
Confidence 33445667899999888643221 24899999999986643321 1123568999999988765432
Q ss_pred ------CeEEEEEcCC---C--eeeeeec--eeEEEEEEcCCCCEEEEEeC---CCe--EEEEEcCCCccc--------c
Q psy10566 414 ------GQFYQCDIEG---Q--VLDSWEG--VRVNCLWCRSDGKSVLAADT---HHR--IRTYNFEHLTDS--------N 467 (604)
Q Consensus 414 ------g~i~iwd~~~---~--~~~~~~~--~~v~~l~~s~~g~~l~~~~~---dg~--I~i~d~~~~~~~--------~ 467 (604)
..|..+.+.. . .+..... ..+..+..+.++++++.... +.. +.+.|+...... .
T Consensus 202 ~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 281 (430)
T d1qfma1 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (430)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeE
Confidence 2577777732 1 2222111 13667788999998775433 223 444554432211 1
Q ss_pred cccCCCCeeEEEECCCCCEEEEEec---CCeEEEEecCCCce--eeEeeccccceEEEEeeeCCCCCcEEE-EEeCCC--
Q psy10566 468 LLQEDHPVMSFTIDATDRLALLNVS---TQGVHLWDLRDRIL--LRKFQGVTQGQFTIHSCFGGANQDFVA-SGSEDG-- 539 (604)
Q Consensus 468 ~~~~~~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs~dg-- 539 (604)
.............+.++.+++.... ++.|...++..... ...+-.+........... ..+++|+ ..-.++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~--~~~~~lvl~~~~~~~~ 359 (430)
T d1qfma1 282 LIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVAC--VRSNFLVLCYLHDVKN 359 (430)
T ss_dssp EECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEE--ETTTEEEEEEEETTEE
T ss_pred eecccccceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEE--EECCEEEEEEEcCCEe
Confidence 1111111122222223333333322 35677777765432 233333222222222221 2233444 445564
Q ss_pred cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC---CCcEEEECCCCCCC
Q psy10566 540 KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD---DCTVRIWGPHLNTN 594 (604)
Q Consensus 540 ~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~---Dg~I~iW~~~~~~~ 594 (604)
.|++++..+++.........+.|..+...++...+.++.+. =.++.-+|+.+++.
T Consensus 360 ~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~ 417 (430)
T d1qfma1 360 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL 417 (430)
T ss_dssp EEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred EEEEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence 58899999887766555555667766666664445544432 26788899888753
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.26 E-value=0.018 Score=55.23 Aligned_cols=230 Identities=10% Similarity=0.005 Sum_probs=123.8
Q ss_pred CcEEEEEEcCCCCeEEEEECC-CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc----eEEEEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKD-TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC----HELWVW 376 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~d-g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~----~~i~vw 376 (604)
......++.++|++++.|+.+ ..+.+||.. +........+.. ...-.+.+..+||+.++.++.... ..+.+|
T Consensus 76 ~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~--~~~w~~~~~~~~-~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~y 152 (387)
T d1k3ia3 76 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSS--SDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVY 152 (387)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGG--GTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEE
T ss_pred cceeEEEEecCCcEEEeecCCCcceeEecCc--cCcccccccccc-cccccceeeecCCceeeeccccccccccceeeee
Confidence 334456889999999988755 579999988 444443333332 222346777889999988876431 258999
Q ss_pred ECCCceEEEEecCC--------CC-----CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece-----------
Q psy10566 377 NIETELLRVKLNHS--------PE-----DSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV----------- 432 (604)
Q Consensus 377 d~~~~~~~~~~~~~--------~~-----~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----------- 432 (604)
|..+......-... +. ..-..+...++|+.++.++..+.+..++............
T Consensus 153 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (387)
T d1k3ia3 153 SPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM 232 (387)
T ss_dssp ETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCB
T ss_pred cCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccc
Confidence 99887654321100 00 0011123345677777777777777777754333221100
Q ss_pred -eEEEEEEcCCCCEEEEEeCCC--------eEEEEEcCCCccc-------ccccCCCCeeEEEECCCCCEEEEEecC---
Q psy10566 433 -RVNCLWCRSDGKSVLAADTHH--------RIRTYNFEHLTDS-------NLLQEDHPVMSFTIDATDRLALLNVST--- 493 (604)
Q Consensus 433 -~v~~l~~s~~g~~l~~~~~dg--------~I~i~d~~~~~~~-------~~~~~~~~i~~~~~s~~~~~l~~~~~d--- 493 (604)
....+....+++.++.++... ...+.++...... ........-.+....++++.+++|+.+
T Consensus 233 ~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~ 312 (387)
T d1k3ia3 233 CGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 312 (387)
T ss_dssp TCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC
T ss_pred cccEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCc
Confidence 112222334566666665321 2333433321111 111112223456667899998888753
Q ss_pred --------CeEEEEecCCCceeeEeeccccce--EEEEeeeCCCCCcEEEEEeC
Q psy10566 494 --------QGVHLWDLRDRILLRKFQGVTQGQ--FTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 494 --------g~I~lwd~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~sgs~ 537 (604)
.++.+||..+.+-.. +....... ... ....+||++++.|+.
T Consensus 313 ~~~~~~~~~~ve~Ydp~~~~W~~-~~~~~~~R~~Hs~--a~l~~dG~v~v~GG~ 363 (387)
T d1k3ia3 313 PFEDSTPVFTPEIYVPEQDTFYK-QNPNSIVRVYHSI--SLLLPDGRVFNGGGG 363 (387)
T ss_dssp TTCCCSBCCCCEEEEGGGTEEEE-CCCCSSCCCTTEE--EEECTTSCEEEEECC
T ss_pred cCCCCcEeceEEEEECCCCeEEE-CCCCCCcccceEE--EEECCCCEEEEEeCC
Confidence 147889987764221 11111100 011 112478999988874
|
| >d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain superfamily: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain family: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain domain: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.20 E-value=0.00015 Score=50.55 Aligned_cols=58 Identities=16% Similarity=0.363 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHcCChHHHHHHHhhh
Q psy10566 86 DEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDL 144 (604)
Q Consensus 86 ~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~g~w~~~~~~l~~l 144 (604)
++|+.+-|++||..+||.+++.+|++|+.+.++.. ...-...+++-+|..+.++-.++
T Consensus 7 ~eeL~kaI~~Yl~~~~~~~~~~~l~~e~~l~~~~~-~~~ky~glLEKKWtSViRLQkKI 64 (76)
T d1uuja_ 7 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEE-LDKKYAGLLEKKWTSVIRLQKKV 64 (76)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHH-HHHHHTTHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCcHHHHHHHHHHHCCCCChh-hhhhhcCcchhHHHHHHHHHHHH
Confidence 78999999999999999999999999998875533 34444567778898887765443
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.10 E-value=0.043 Score=55.78 Aligned_cols=82 Identities=13% Similarity=-0.027 Sum_probs=50.5
Q ss_pred CeEEEEecCCCceeeEeeccccce-EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC-CeeEEEEcCCC
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQ-FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR-TVSCVAWNPVY 571 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~-~V~~v~~sp~~ 571 (604)
|.|.-+|+.+++.+-++....... ..+ ...+.++++|+.||.++.+|.++|+.+-++.-... .-.-+.|..++
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l-----~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dG 518 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAAWGGTL-----YTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKG 518 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCE-----EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred ccEEEeccCCCceeeEcCCCCCCCccee-----EecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECC
Confidence 357777888877765543221100 011 12456888899999999999999999988764321 11225555575
Q ss_pred CcEEEEEeC
Q psy10566 572 HQMIASVSD 580 (604)
Q Consensus 572 ~~~l~s~s~ 580 (604)
..+++....
T Consensus 519 kqYi~v~~g 527 (571)
T d2ad6a1 519 KQYIGSMYG 527 (571)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 567655443
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.09 E-value=0.028 Score=57.22 Aligned_cols=147 Identities=9% Similarity=0.022 Sum_probs=84.7
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCC---CCeEEEEEecCCCEEEEEe------cCCeEEEEEc-CCCeeeee
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPE---DSLTSCSWNRDGTKFVCGG------IRGQFYQCDI-EGQVLDSW 429 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~~------~dg~i~iwd~-~~~~~~~~ 429 (604)
..++.++.++ .+.-.|.++|+.......... ..++..-.-.++ .++.+. .+|.|.-+|. +|+.+-.+
T Consensus 116 ~~i~~~~~~g--~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~ 192 (571)
T d2ad6a1 116 GQIVKKQANG--HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TEEEEECTTS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CeEEEEeCCC--cEEeeehhhhhhhccccccccccccceeecCeEeCC-eEEEeeccccccccCcEEEEECCCCcEEEEE
Confidence 4677778887 899999999998766542211 111111111133 444444 3678999998 57766544
Q ss_pred ece---------------------------------------eE-EEEEEcCCCCEEEEEeC----------------CC
Q psy10566 430 EGV---------------------------------------RV-NCLWCRSDGKSVLAADT----------------HH 453 (604)
Q Consensus 430 ~~~---------------------------------------~v-~~l~~s~~g~~l~~~~~----------------dg 453 (604)
... .+ ...++.+....++.+.. ..
T Consensus 193 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~ 272 (571)
T d2ad6a1 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred eccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCcccccccccccccc
Confidence 311 01 22355566666555544 24
Q ss_pred eEEEEEcCCCcccccccC----------CCCeeEEEECCCCC---EEEEEecCCeEEEEecCCCceeeE
Q psy10566 454 RIRTYNFEHLTDSNLLQE----------DHPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~----------~~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
.+.-.|.++++.....+. ..+.....+..+++ .++..+.+|.++++|..+++.+..
T Consensus 273 svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~ 341 (571)
T d2ad6a1 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVA 341 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeee
Confidence 567777777765543331 12222223333443 467788899999999999987643
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=96.88 E-value=0.058 Score=55.01 Aligned_cols=148 Identities=14% Similarity=0.022 Sum_probs=87.0
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEec------CCeEEEEEc-CCCeeeeee
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGI------RGQFYQCDI-EGQVLDSWE 430 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~------dg~i~iwd~-~~~~~~~~~ 430 (604)
..++.++.|+ .|.-.|.++|+....+.......-..+.-.| -+..++++.. .|.|.-+|. +|+.+-.+.
T Consensus 122 ~~v~~~t~dg--~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~ 199 (596)
T d1w6sa_ 122 ALILKTQLDG--NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (596)
T ss_dssp CEEEEECTTS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred eEEEEEeCCC--CeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEee
Confidence 4577888887 8999999999988877532111111111111 2344555543 488999998 577765543
Q ss_pred ce----------------------------------------eEEEEEEcCCCCEEEEEeCC----------------Ce
Q psy10566 431 GV----------------------------------------RVNCLWCRSDGKSVLAADTH----------------HR 454 (604)
Q Consensus 431 ~~----------------------------------------~v~~l~~s~~g~~l~~~~~d----------------g~ 454 (604)
.. .-...++.+....++.+..+ ..
T Consensus 200 t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~s 279 (596)
T d1w6sa_ 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (596)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred ccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccc
Confidence 11 01233455666666555432 34
Q ss_pred EEEEEcCCCcccccccC----------CCCeeEEE-ECCCC---CEEEEEecCCeEEEEecCCCceeeE
Q psy10566 455 IRTYNFEHLTDSNLLQE----------DHPVMSFT-IDATD---RLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~----------~~~i~~~~-~s~~~---~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
|.-.|..+++.....+. .....-+. ...++ ..++....+|.++++|-.+++++..
T Consensus 280 ivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~ 348 (596)
T d1w6sa_ 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (596)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeee
Confidence 77778888776553332 11222222 23344 3577788899999999999987753
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=96.86 E-value=0.23 Score=50.31 Aligned_cols=81 Identities=9% Similarity=-0.106 Sum_probs=48.7
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC-eeEEEEcCCCC
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT-VSCVAWNPVYH 572 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~-V~~v~~sp~~~ 572 (604)
|.|.-||+.+++.+-............ .+..+.+++.|+.||.++.+|.++|+.+.++.-..+. -.-+.|..++.
T Consensus 453 G~l~A~D~~TG~~~W~~~~~~~~~gg~----lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGk 528 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMERFAVWGGT----MATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT 528 (596)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBC----EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ceEEEEeCCCCceecccCCCCCCccce----eEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCE
Confidence 457777888877664433211100000 0134668888999999999999999999888643211 11134555655
Q ss_pred cEEEEE
Q psy10566 573 QMIASV 578 (604)
Q Consensus 573 ~~l~s~ 578 (604)
++++..
T Consensus 529 QYvav~ 534 (596)
T d1w6sa_ 529 QYVAIY 534 (596)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.74 E-value=0.36 Score=48.50 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=51.6
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe-eEEEEcCCCC
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV-SCVAWNPVYH 572 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V-~~v~~sp~~~ 572 (604)
|.+.-||+.+++.+-.+.......... + ...+.+++.|+.||.++.+|.++|+.+.++.-..+.. .-+.|..++.
T Consensus 438 G~l~A~D~~tGk~~W~~~~~~~~~gg~--l--~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGk 513 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYPTHWNGGT--L--STAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR 513 (560)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCE--E--EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEeCCCCeEeeeccCCCCCCCce--e--EECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence 457788888888776554222111011 1 1245688899999999999999999998886432211 1245555655
Q ss_pred cEEEEEe
Q psy10566 573 QMIASVS 579 (604)
Q Consensus 573 ~~l~s~s 579 (604)
++|+..+
T Consensus 514 qyv~v~a 520 (560)
T d1kv9a2 514 QYVAIMA 520 (560)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 6666544
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.70 E-value=0.16 Score=51.13 Aligned_cols=231 Identities=9% Similarity=0.003 Sum_probs=125.9
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEec------CCeEEEEEc-CCCeeeee
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGI------RGQFYQCDI-EGQVLDSW 429 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~------dg~i~iwd~-~~~~~~~~ 429 (604)
+..++.+..++ .+.-.|..+|+.+.............+.-.| ....++.+.. .|.|.-+|. +|+.+-.+
T Consensus 117 ~~~v~~~~~~g--~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~ 194 (560)
T d1kv9a2 117 GDKVYVGTLDG--RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (560)
T ss_dssp BTEEEEECTTS--EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCeEEEEeCCC--EEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeee
Confidence 34677777787 7999999999988766532211111111111 1223444332 367888888 56666554
Q ss_pred ece--------------------------------e-EEEEEEcCCCCEEEEEeC-------------------CCeEEE
Q psy10566 430 EGV--------------------------------R-VNCLWCRSDGKSVLAADT-------------------HHRIRT 457 (604)
Q Consensus 430 ~~~--------------------------------~-v~~l~~s~~g~~l~~~~~-------------------dg~I~i 457 (604)
... . -...++.+....++.+.. ...|.-
T Consensus 195 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivA 274 (560)
T d1kv9a2 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (560)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred eeccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEE
Confidence 310 0 112455566665554432 234666
Q ss_pred EEcCCCcccccccC----------CCCeeEEEECCCC---CEEEEEecCCeEEEEecCCCceeeEeeccccc-eE-----
Q psy10566 458 YNFEHLTDSNLLQE----------DHPVMSFTIDATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQG-QF----- 518 (604)
Q Consensus 458 ~d~~~~~~~~~~~~----------~~~i~~~~~s~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~-~~----- 518 (604)
.|.++++.....+. .....-+.+..++ ..++.+..+|.++++|..+++++......... ..
T Consensus 275 ld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~ 354 (560)
T d1kv9a2 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (560)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred ecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChh
Confidence 67777665443321 1122222233334 35667888999999999999877544321100 00
Q ss_pred ----------------EE-----------EeeeCCCCCcEEEEEeC----------------------------------
Q psy10566 519 ----------------TI-----------HSCFGGANQDFVASGSE---------------------------------- 537 (604)
Q Consensus 519 ----------------~i-----------~~~~~~~~~~~l~sgs~---------------------------------- 537 (604)
.+ ....++|+..+++....
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 434 (560)
T d1kv9a2 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (560)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred hccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCc
Confidence 00 00112244444443321
Q ss_pred --CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 538 --DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 538 --dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|.|.-||+.+|+.+-...... +..+-...-. +.+++.++.||.++.+|.++++
T Consensus 435 ~~~G~l~A~D~~tGk~~W~~~~~~-~~~gg~l~Ta-gglVF~G~~dg~l~A~Da~tGe 490 (560)
T d1kv9a2 435 VVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTA-GNLVFQGTAAGQMHAYSADKGE 490 (560)
T ss_dssp GCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred ccccceEEEeCCCCeEeeeccCCC-CCCCceeEEC-CCEEEEECCCCcEEEEECCCCc
Confidence 2567888999998887765321 2221112223 5677789999999999999987
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.67 E-value=0.26 Score=45.99 Aligned_cols=188 Identities=15% Similarity=0.113 Sum_probs=105.9
Q ss_pred EEEEEEcCCCCeEEEEEC------------CCeEEEEEeCCCCceeEeeEEeccC----CCCeeEEEE--CCCCC-eEEE
Q psy10566 304 VWFCKFSPDGLKLATGSK------------DTTVIIWDVDPVTFTCQHRKTLEGH----TLGVAYLAW--SPDSS-HLLV 364 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~------------dg~i~iwd~~~~~~~~~~~~~l~~h----~~~V~~l~~--spd~~-~l~s 364 (604)
--+++..|||..+++++. .|.|.++|+.........+....+. .-....+.. .++|. +|++
T Consensus 37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v 116 (340)
T d1v04a_ 37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 116 (340)
T ss_dssp CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence 335788899987766532 4889999987443333333222111 112344443 45665 4555
Q ss_pred EeC-CCceEEEEEECCCce----EEEEecCCCCCCeEEEEEecCCCEEEEEec---------------CCeEEEEEcCCC
Q psy10566 365 VGP-EDCHELWVWNIETEL----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGI---------------RGQFYQCDIEGQ 424 (604)
Q Consensus 365 ~~~-d~~~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---------------dg~i~iwd~~~~ 424 (604)
... ....+|-+|++.... ....+.........++++..++.++++-.. -+...+|..+++
T Consensus 117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~ 196 (340)
T d1v04a_ 117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 196 (340)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS
T ss_pred EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC
Confidence 443 122378888765332 223344344456889999999988887311 122334433333
Q ss_pred eeeee-ec-eeEEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCcccc---cccCCCCeeEEEECCCCCEEEEEe
Q psy10566 425 VLDSW-EG-VRVNCLWCRSDGKSVLAA-DTHHRIRTYNFEHLTDSN---LLQEDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 425 ~~~~~-~~-~~v~~l~~s~~g~~l~~~-~~dg~I~i~d~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~ 491 (604)
..+.. .+ ...+.++++|+++.++++ +..++|+.|++....... ...-....-.+.+.+.+..+.+++
T Consensus 197 ~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 197 DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred ceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence 22222 22 368899999999877665 456789999987543222 222345567788876544444444
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=96.55 E-value=0.11 Score=48.69 Aligned_cols=187 Identities=14% Similarity=0.199 Sum_probs=112.6
Q ss_pred cCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEc------CCCCEEEEEeC--C--CeEEEEEcCCCc--cccc-
Q psy10566 402 RDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCR------SDGKSVLAADT--H--HRIRTYNFEHLT--DSNL- 468 (604)
Q Consensus 402 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s------~~g~~l~~~~~--d--g~I~i~d~~~~~--~~~~- 468 (604)
|+...++....++-+++||++|+.+......+++.+..- .....+++++. + .+|.+|.+.... ....
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~G~~l~~~~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~ 117 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLEGKMLHSYHTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSIT 117 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETTCCEEEECCSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECS
T ss_pred cCccEEEEEcCcCCEEEEcCCCcEEEecccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccccc
Confidence 345677777777779999999999988876665555433 22223445542 2 367788775321 1111
Q ss_pred ------ccCCCCeeEEEE--CCC-CC-EEEEEecCCeEEEEecC---CC----ceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 469 ------LQEDHPVMSFTI--DAT-DR-LALLNVSTQGVHLWDLR---DR----ILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 469 ------~~~~~~i~~~~~--s~~-~~-~l~~~~~dg~I~lwd~~---~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
......+..+|+ ++. +. ++++...+|.+..|.+. .+ +.++.+....+ +..|.+......
T Consensus 118 ~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q----~EGCVvDde~~~ 193 (353)
T d1h6la_ 118 DPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQ----TEGMAADDEYGS 193 (353)
T ss_dssp CSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSC----EEEEEEETTTTE
T ss_pred ccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCc----cceEEEeCCCCc
Confidence 111234566666 664 43 56677778998888763 22 34455544332 334555577778
Q ss_pred EEEEeCCCcEEEEeCCC-----CcceEEeeC--CCCCeeEEEEcC--C-CCcEEEEEeCCCcEEEECCCCC
Q psy10566 532 VASGSEDGKVYIWHVKR-----ELPIATLSG--HTRTVSCVAWNP--V-YHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~-----~~~~~~l~~--h~~~V~~v~~sp--~-~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
|+.+-++..|+.++... +..+....+ ..+.+-.++.-. + .+.+|+|.-.|++..||+....
T Consensus 194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~ 264 (353)
T d1h6la_ 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ 264 (353)
T ss_dssp EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 88888887776666542 222323222 356677777532 2 2567777778899999998764
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.33 E-value=0.18 Score=47.11 Aligned_cols=156 Identities=8% Similarity=0.034 Sum_probs=89.4
Q ss_pred eeEEEECCCCCeEEEEeC----------CCceEEEEEECCCceEEE---EecCCC----CCCeEEEEE--ecCCC-EEEE
Q psy10566 350 VAYLAWSPDSSHLLVVGP----------EDCHELWVWNIETELLRV---KLNHSP----EDSLTSCSW--NRDGT-KFVC 409 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~----------d~~~~i~vwd~~~~~~~~---~~~~~~----~~~v~~~~~--~~~~~-~l~s 409 (604)
.-.|+..|+|..+++++. +..+.|.++|+.+..... .+.... .-....+.. .++|. +|++
T Consensus 37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v 116 (340)
T d1v04a_ 37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 116 (340)
T ss_dssp CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence 445666777766666542 222489999987653221 111110 112345544 33555 3444
Q ss_pred Ee---cCCeEEEEEcC--CCeeeee---ec---eeEEEEEEcCCCCEEEEEeC---------------CCeEEEEEcCCC
Q psy10566 410 GG---IRGQFYQCDIE--GQVLDSW---EG---VRVNCLWCRSDGKSVLAADT---------------HHRIRTYNFEHL 463 (604)
Q Consensus 410 ~~---~dg~i~iwd~~--~~~~~~~---~~---~~v~~l~~s~~g~~l~~~~~---------------dg~I~i~d~~~~ 463 (604)
.. ...+|.+|++. +..+.-. .. ...+++++..++..+++-.. -+...+|.....
T Consensus 117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~ 196 (340)
T d1v04a_ 117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 196 (340)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS
T ss_pred EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC
Confidence 43 34578888873 3332211 11 24788999899987777421 123344444444
Q ss_pred cccccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCc
Q psy10566 464 TDSNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRI 505 (604)
Q Consensus 464 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~ 505 (604)
........-...+.++++|++++++++. ..+.|+.|++....
T Consensus 197 ~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~ 239 (340)
T d1v04a_ 197 DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW 239 (340)
T ss_dssp CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred ceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence 4433444456688999999998877665 46789999987543
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.20 E-value=0.6 Score=44.99 Aligned_cols=244 Identities=16% Similarity=0.205 Sum_probs=127.0
Q ss_pred cCCCcEEEEEEcCCCCeEEEE-ECCC----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC----
Q psy10566 299 DHCDEVWFCKFSPDGLKLATG-SKDT----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---- 369 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasg-s~dg----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---- 369 (604)
++.-.+..+++|||++++|.+ +.+| .++++|+. ++.... ..+.. .....++|++|++.|+....+.
T Consensus 122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~--tg~~~~-~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~ 196 (430)
T d1qfma1 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD--GAKELP-DVLER--VKFSCMAWTHDGKGMFYNAYPQQDGK 196 (430)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT--TTEEEE-EEEEE--ECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred cccceecceEecCCCCEEEEEeccccCchheeEEeccC--cceecc-ccccc--ccccceEEcCCCCEEEEEEeccccCc
Confidence 344445567899999988744 3333 58999998 332211 22221 1235689999999888765331
Q ss_pred ----------ceEEEEEECCCceE--EEEecC-CCCCCeEEEEEecCCCEEEEEec---CCe--EEEEEcCC---C----
Q psy10566 370 ----------CHELWVWNIETELL--RVKLNH-SPEDSLTSCSWNRDGTKFVCGGI---RGQ--FYQCDIEG---Q---- 424 (604)
Q Consensus 370 ----------~~~i~vwd~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~---dg~--i~iwd~~~---~---- 424 (604)
...|+.+.+.+... ...+.. .....+..+..++++++++.... +.. +.+.|+.. .
T Consensus 197 ~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~ 276 (430)
T d1qfma1 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (430)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccc
Confidence 12688888877532 222221 12234667778899998875433 233 34445421 1
Q ss_pred --eeeeeecee-EEEEEEcCCCCEEEE-Ee---CCCeEEEEEcCCCccc---ccccC-CCCeeEEEECCCCCEEEEEe-c
Q psy10566 425 --VLDSWEGVR-VNCLWCRSDGKSVLA-AD---THHRIRTYNFEHLTDS---NLLQE-DHPVMSFTIDATDRLALLNV-S 492 (604)
Q Consensus 425 --~~~~~~~~~-v~~l~~s~~g~~l~~-~~---~dg~I~i~d~~~~~~~---~~~~~-~~~i~~~~~s~~~~~l~~~~-~ 492 (604)
......... ....... +|..++. .. .++.|...++...... .++.+ ...+..-.+...+.++++.. .
T Consensus 277 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~ 355 (430)
T d1qfma1 277 LKWVKLIDNFEGEYDYVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (430)
T ss_dssp CCCEEEECSSSSCEEEEEE-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred cceeEeecccccceEEEec-CCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEc
Confidence 011111111 1111112 3333333 32 2366777777654322 23333 33454444444555666554 4
Q ss_pred CC--eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEeC---CCcEEEEeCCCCcc
Q psy10566 493 TQ--GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGSE---DGKVYIWHVKRELP 551 (604)
Q Consensus 493 dg--~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~---dg~I~iwd~~~~~~ 551 (604)
++ .|+++++.++.....+...... +......++.. +.++-+. =.+++-+|+.+++.
T Consensus 356 ~~~~~l~v~~~~~~~~~~~~~~~~~s---v~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~ 417 (430)
T d1qfma1 356 DVKNTLQLHDLATGALLKIFPLEVGS---VVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL 417 (430)
T ss_dssp TTEEEEEEEETTTCCEEEEECCCSSE---EEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred CCEeEEEEEECCCCcEEEecCCCCce---EeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence 44 4889999887665544333332 22222233333 3333222 26788999988754
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=96.03 E-value=0.91 Score=45.53 Aligned_cols=81 Identities=14% Similarity=0.113 Sum_probs=48.8
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe-eEEEEcCCCCc
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV-SCVAWNPVYHQ 573 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V-~~v~~sp~~~~ 573 (604)
.+.-||+.+++.+-.+.......... + ...+.++++|+.||.++.+|.++|+.+.++.-..+.. .-+.|..++.+
T Consensus 458 ~l~AiD~~tGk~~W~~~~~~p~~gg~--l--stagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQ 533 (573)
T d1kb0a2 458 RLLAWDPVAQKAAWSVEHVSPWNGGT--L--TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ 533 (573)
T ss_dssp EEEEEETTTTEEEEEEEESSSCCCCE--E--EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cEEEeCCCCCceEeeecCCCCCCCce--E--EEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence 46667777777665554322111011 1 1356788899999999999999999998876432211 11445556445
Q ss_pred EEEEEe
Q psy10566 574 MIASVS 579 (604)
Q Consensus 574 ~l~s~s 579 (604)
+++..+
T Consensus 534 Yv~v~~ 539 (573)
T d1kb0a2 534 YVSVAV 539 (573)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 554443
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=95.93 E-value=0.62 Score=46.84 Aligned_cols=53 Identities=6% Similarity=0.091 Sum_probs=35.7
Q ss_pred CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 539 GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 539 g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|.|.-||..+|+.+-...... +...=..+-. +.+++.|+.||.++.+|.++++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lsta-gglVF~G~~dg~l~A~Da~TGe 509 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTA-GNVVFQGTADGRLVAYHAATGE 509 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred ccEEEeCCCCCceEeeecCCC-CCCCceEEEc-CCEEEEECCCCeEEEEECCCCc
Confidence 357778888888777665332 1111112223 5678889999999999999987
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=94.86 E-value=1.5 Score=40.54 Aligned_cols=193 Identities=11% Similarity=0.157 Sum_probs=111.7
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec----C--CCEEEEEecC----CeEEEEEcC--CCe
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR----D--GTKFVCGGIR----GQFYQCDIE--GQV 425 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~----~--~~~l~s~~~d----g~i~iwd~~--~~~ 425 (604)
+...++.....+ -|.+||++ |+.+..+. .+.+..+..-. + ...+++++.. .+|.+|.++ ...
T Consensus 39 ~~SlI~gTdK~~--Gl~vYdL~-G~~l~~~~---~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~ 112 (353)
T d1h6la_ 39 QNSKLITTNKKS--GLAVYSLE-GKMLHSYH---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (353)
T ss_dssp GGCEEEEEETTS--CCEEEETT-CCEEEECC---SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred CccEEEEEcCcC--CEEEEcCC-CcEEEecc---cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence 344555554443 49999986 66666654 24566655432 2 2235555532 367788774 333
Q ss_pred eeeeece---------eEEEEEE--cCC-CC-EEEEEeCCCeEEEEEcCCCc-------ccccccCCCCeeEEEECCCCC
Q psy10566 426 LDSWEGV---------RVNCLWC--RSD-GK-SVLAADTHHRIRTYNFEHLT-------DSNLLQEDHPVMSFTIDATDR 485 (604)
Q Consensus 426 ~~~~~~~---------~v~~l~~--s~~-g~-~l~~~~~dg~I~i~d~~~~~-------~~~~~~~~~~i~~~~~s~~~~ 485 (604)
+..+... .+..+|+ ++. |. ++++...+|.+..|.+.... ....+.....+..+.++....
T Consensus 113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~ 192 (353)
T d1h6la_ 113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYG 192 (353)
T ss_dssp EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCC
Confidence 3333221 2445554 664 44 46677778999888774321 222344567889999999999
Q ss_pred EEEEEecCCeEEEEecCC-----CceeeEeec--cccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCC-CcceEEee
Q psy10566 486 LALLNVSTQGVHLWDLRD-----RILLRKFQG--VTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKR-ELPIATLS 556 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~-----~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~ 556 (604)
.|+++-.+..|..++... +..+....+ .......+.....+. +|-+|+|.-.+++..|||..+ .+.+..|.
T Consensus 193 ~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F~ 272 (353)
T d1h6la_ 193 SLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADFQ 272 (353)
T ss_dssp EEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred cEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceEE
Confidence 999999888887777642 122222211 223334444333322 334444544588999999986 35565553
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.53 E-value=2 Score=41.40 Aligned_cols=111 Identities=13% Similarity=0.109 Sum_probs=64.0
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEECCC---CCeEEEEeC---
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAWSPD---SSHLLVVGP--- 367 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~spd---~~~l~s~~~--- 367 (604)
.-+.-++|+|.|||++|++--.+|.|++++.. ++....+..+.. -......|+|+|+ ..++..+..
T Consensus 25 ~L~~P~~la~~pdg~llVter~~G~i~~v~~~--~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~ 102 (450)
T d1crua_ 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPE--SGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (450)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTT--TCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCCceEEEEeCCCeEEEEEecCCEEEEEECC--CCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCC
Confidence 34678899999999988876457999988766 334444444321 2356789999995 334433211
Q ss_pred ------CCce--EEEEEECCCce--------EEEEecCCCCCCeEEEEEecCCCEEEEEec
Q psy10566 368 ------EDCH--ELWVWNIETEL--------LRVKLNHSPEDSLTSCSWNRDGTKFVCGGI 412 (604)
Q Consensus 368 ------d~~~--~i~vwd~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 412 (604)
.... .+..+...... ...............+.|.|||.++++.+.
T Consensus 103 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd 163 (450)
T d1crua_ 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (450)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCCcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence 0011 23333332211 111111222234678999999988777664
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.98 E-value=3.4 Score=41.12 Aligned_cols=53 Identities=6% Similarity=0.015 Sum_probs=37.9
Q ss_pred CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 539 GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 539 g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|.|.-+|+.+|+.+-....+. ++.+-..+.. +.+++.|+.||.++.+|.++++
T Consensus 466 G~l~AiD~~TG~i~W~~~~~~-p~~~g~lsta-gglVF~Gt~dg~l~A~Da~TGe 518 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEHL-PLWAGVLATA-GNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESS-CCCSCCEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred CeEEEEcCCCCcEEeecCCCC-CCccceeEEc-CCeEEEeCCCCeEEEEECCCCc
Confidence 568888989998887776443 2221112233 5677789999999999999987
|
| >d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: GyrA/ParC C-terminal domain-like family: GyrA/ParC C-terminal domain-like domain: Topoisomerase IV subunit A, ParC, C-terminal domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.77 E-value=1.9 Score=39.33 Aligned_cols=191 Identities=9% Similarity=0.002 Sum_probs=107.0
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCC------ceE
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIET------ELL 383 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~------~~~ 383 (604)
|+...+++-+.+|.|+--.+.........-..++. .+.+..+........|+.-+..| ...+.+|++.. |..
T Consensus 3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k~-~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~p 81 (323)
T d1wp5a_ 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCcccC-CceEEEEEEEcCCCEEEEEecCCEEEEEeeccCccccccccccc
Confidence 56667888899999886554310000000011222 23454444444444455555555 22344455543 222
Q ss_pred EEEec-CCCCCCeEEEEEec---CCCEEEEEecCCeEEEEEcCC-------Ce---eeeeeceeEEEEEEcCCCCEEEEE
Q psy10566 384 RVKLN-HSPEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIEG-------QV---LDSWEGVRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 384 ~~~~~-~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~-------~~---~~~~~~~~v~~l~~s~~g~~l~~~ 449 (604)
+..+. ......+..+...+ ...+++..+..|.++..+++. +- +....+..+..+....+...++.+
T Consensus 82 i~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~ 161 (323)
T d1wp5a_ 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred ceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEEE
Confidence 22221 12233444433322 467899999999999998731 11 112223466777777777889999
Q ss_pred eCCCeEEEEEcCCCcccc---------cccCCCCeeE-EEECCCCCEEEEEecCCeEEEEecC
Q psy10566 450 DTHHRIRTYNFEHLTDSN---------LLQEDHPVMS-FTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~---------~~~~~~~i~~-~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
+..|.+..|+........ .+.....+.+ ..+.+++..+++.+..|..+...+.
T Consensus 162 t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~ 224 (323)
T d1wp5a_ 162 THNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EecceeeEeecccccccCcccccccccccccccccchhhhccccccceeeeeeeheeecccch
Confidence 999999999876532221 1222445554 4456677889999999988876654
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.20 E-value=2 Score=37.97 Aligned_cols=218 Identities=11% Similarity=-0.003 Sum_probs=98.0
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-------ceEEEEEECCCceEEEEecCCCCCCeE
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-------CHELWVWNIETELLRVKLNHSPEDSLT 396 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-------~~~i~vwd~~~~~~~~~~~~~~~~~v~ 396 (604)
.+.+||.. +.++..+..+......-..+.. ++..++.||... ...+++||..+......-.... ..-.
T Consensus 20 ~~~~yd~~--t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~-~r~~ 94 (288)
T d1zgka1 20 YLEAYNPS--NGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV-PRNR 94 (288)
T ss_dssp CEEEEETT--TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSS-CCBT
T ss_pred eEEEEECC--CCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccc-eecc
Confidence 57889987 4455555444432222222222 455555555310 1258899988776544322111 1111
Q ss_pred EEEEecCCCEEEEEecCCe-----EEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCC
Q psy10566 397 SCSWNRDGTKFVCGGIRGQ-----FYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTH-----HRIRTYNFEHL 463 (604)
Q Consensus 397 ~~~~~~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~d-----g~I~i~d~~~~ 463 (604)
..+...+++.++.++.++. ...+|............ +........++..++.++.+ ..+..||..+.
T Consensus 95 ~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~GG~~~~~~~~~~~~~d~~~~ 174 (288)
T d1zgka1 95 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN 174 (288)
T ss_dssp CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred eeccccceeeEEecceecccccceeeeeccccCccccccccccccccceeeeeeecceEecCcccccccceEEEeecccc
Confidence 1122236666666655443 33455543333222211 11111111234444454443 35778887664
Q ss_pred cccccccC--CCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe
Q psy10566 464 TDSNLLQE--DHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 464 ~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs 536 (604)
........ .....+.... ++..++.++.+ .....+|..+.+....-. .........++. .++++++.|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~~~~~--~~~~l~v~GG 250 (288)
T d1zgka1 175 EWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP-MKHRRSALGITV--HQGRIYVLGG 250 (288)
T ss_dssp EEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEE--ETTEEEEECC
T ss_pred ccccccccccccccccccce-eeeEEEecCccccccccceeeeeecceeeecccC-ccCcccceEEEE--ECCEEEEEec
Confidence 33222111 1111222222 34555555443 246777776654332111 111111111122 3677888777
Q ss_pred CCC-----cEEEEeCCCCc
Q psy10566 537 EDG-----KVYIWHVKREL 550 (604)
Q Consensus 537 ~dg-----~I~iwd~~~~~ 550 (604)
.++ .|.+||+.+.+
T Consensus 251 ~~~~~~~~~v~~yd~~~~~ 269 (288)
T d1zgka1 251 YDGHTFLDSVECYDPDTDT 269 (288)
T ss_dssp BCSSCBCCEEEEEETTTTE
T ss_pred CCCCeecceEEEEECCCCE
Confidence 654 37888888643
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.49 E-value=5.7 Score=39.40 Aligned_cols=81 Identities=11% Similarity=0.111 Sum_probs=52.2
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe-eEEEEcCCCC
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV-SCVAWNPVYH 572 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V-~~v~~sp~~~ 572 (604)
|.|.-+|+.+++.+-.+.......... ....+.++++|+.||.++.+|.++|+.+.+++-..... .-+.|..++.
T Consensus 466 G~l~AiD~~TG~i~W~~~~~~p~~~g~----lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~ 541 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEHLPLWAGV----LATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSCC----EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CeEEEEcCCCCcEEeecCCCCCCccce----eEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence 567778888887776655332211001 11356688889999999999999999998886432211 1256666755
Q ss_pred cEEEEE
Q psy10566 573 QMIASV 578 (604)
Q Consensus 573 ~~l~s~ 578 (604)
++++..
T Consensus 542 qYv~i~ 547 (582)
T d1flga_ 542 QYLGVT 547 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666544
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.26 E-value=2.6 Score=37.12 Aligned_cols=215 Identities=12% Similarity=-0.012 Sum_probs=95.7
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC---------CeEEEEEcCCCeeeeeece---eEEEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---------GQFYQCDIEGQVLDSWEGV---RVNCLWC 439 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~---~v~~l~~ 439 (604)
.+.+||+.+++....-.......-.+++ .-++..++.|+.. ..+.+||............ +....+.
T Consensus 20 ~~~~yd~~t~~W~~~~~~p~~R~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~~ 98 (288)
T d1zgka1 20 YLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 98 (288)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred eEEEEECCCCeEEECCCCCCccceeEEE-EECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceecc
Confidence 5889999998754432211111111222 2256666766531 3566778755444433221 1111112
Q ss_pred cCCCCEEEEEeCCC-----eEEEEEcCCCcccccccCCC--CeeEEEECCCCCEEEEEecC-----CeEEEEecCCCcee
Q psy10566 440 RSDGKSVLAADTHH-----RIRTYNFEHLTDSNLLQEDH--PVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILL 507 (604)
Q Consensus 440 s~~g~~l~~~~~dg-----~I~i~d~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~ 507 (604)
..+++.++.++.++ ....+|..+........... .-.+.... ++..++.|+.+ ..+..||..+.+..
T Consensus 99 ~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~~~~~~~ 177 (288)
T d1zgka1 99 VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWR 177 (288)
T ss_dssp EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred ccceeeEEecceecccccceeeeeccccCccccccccccccccceeeee-eecceEecCcccccccceEEEeeccccccc
Confidence 22455555544333 24445655543221111111 11122222 34455555443 34788887765432
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcceEEeeCCCCCe-eEEEEcCCCCcEEEEEeCC
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPIATLSGHTRTV-SCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~l~~h~~~V-~~v~~sp~~~~~l~s~s~D 581 (604)
..-...... ....... .++.+++.|+.+ ....++|..+.+....-....... .+++.. + +++++.|+.+
T Consensus 178 ~~~~~~~~~-~~~~~~~--~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~ 252 (288)
T d1zgka1 178 MITAMNTIR-SGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-Q-GRIYVLGGYD 252 (288)
T ss_dssp ECCCCSSCC-BSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-T-TEEEEECCBC
T ss_pred ccccccccc-ccccccc--eeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEE-C-CEEEEEecCC
Confidence 211111000 0001111 245566666544 356778877654332211111111 122222 3 6788877765
Q ss_pred Cc-----EEEECCCCCC
Q psy10566 582 CT-----VRIWGPHLNT 593 (604)
Q Consensus 582 g~-----I~iW~~~~~~ 593 (604)
+. |.+||+.+.+
T Consensus 253 ~~~~~~~v~~yd~~~~~ 269 (288)
T d1zgka1 253 GHTFLDSVECYDPDTDT 269 (288)
T ss_dssp SSCBCCEEEEEETTTTE
T ss_pred CCeecceEEEEECCCCE
Confidence 43 7788888754
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.83 E-value=10 Score=34.95 Aligned_cols=178 Identities=13% Similarity=0.060 Sum_probs=94.5
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcC-----------C-CeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEc
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-----------G-QVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNF 460 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-----------~-~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~ 460 (604)
....-++.++....+++|+.++ +.+..+. + .......-.+|..++|+.+ .+++ ..++.+..++.
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v-~~~~~l~~~~~ 112 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLV-STRNALYSLDL 112 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEE-EESSEEEEEES
T ss_pred cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEE-EeCCCEEEEEe
Confidence 3466788888777888888775 4555431 1 1111112225788888755 3444 45567888887
Q ss_pred CCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEEEEEeC
Q psy10566 461 EHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 461 ~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~sgs~ 537 (604)
......... ....++..+..+|. .+++...++.+.++++.++.......+.... .....+..+++.|..++++..
T Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g 190 (381)
T d1xipa_ 113 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRN 190 (381)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred eccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEeCC
Confidence 764333222 23456777777664 5677778899999999887543322211100 001222344566666666532
Q ss_pred CCcEEE-EeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE
Q psy10566 538 DGKVYI-WHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 538 dg~I~i-wd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
++ ..+ -++.....+..-......|.+|.|-.+ ..+++.-
T Consensus 191 ~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~-~~F~vvy 230 (381)
T d1xipa_ 191 GE-MEKQFEFSLPSELEELPVEEYSPLSVTILSP-QDFLAVF 230 (381)
T ss_dssp TE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSS-SEEEEEE
T ss_pred Cc-eeeccCCCCccccCCCcCCCcceeEEEEecC-ceEEEEE
Confidence 21 111 111111111111123456888999866 4555544
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.76 E-value=12 Score=34.52 Aligned_cols=175 Identities=12% Similarity=0.104 Sum_probs=98.8
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeC---------CCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVD---------PVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~---------~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
...-++.++...+++.|+.++ ++|-.+. ...........+ ..|..++|+-| .+++.... .+
T Consensus 38 ~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~i----p~v~~vafs~d--~l~v~~~~---~l 107 (381)
T d1xipa_ 38 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEI----PDVIFVCFHGD--QVLVSTRN---AL 107 (381)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEEC----TTEEEEEEETT--EEEEEESS---EE
T ss_pred ccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCC----CCeEEEEeeCC--EEEEEeCC---CE
Confidence 355678888877888888775 6676643 111122222222 35889999754 45555444 47
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec-------eeEEEEEEcCCCCE
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG-------VRVNCLWCRSDGKS 445 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-------~~v~~l~~s~~g~~ 445 (604)
..++...-....... ....++..+.++|. .++....++.+.++++. ++......+ ..+.++++++.|+.
T Consensus 108 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq 184 (381)
T d1xipa_ 108 YSLDLEELSEFRTVT-SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQ 184 (381)
T ss_dssp EEEESSSTTCEEEEE-ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEE
T ss_pred EEEEeeccccccccc-cccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEE
Confidence 777776533222221 12345777777664 67777888999999984 332221111 24778888888888
Q ss_pred EEEEeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~ 490 (604)
++++..++.-.--++....... .......+.++.|-.+..++++-
T Consensus 185 ~v~~~g~~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 185 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEeCCCceeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence 8777433211111222111110 01124567888888776666554
|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: beta-lactamase inhibitor protein-II, BLIP-II domain: beta-lactamase inhibitor protein-II, BLIP-II species: Streptomyces exfoliatus [TaxId: 1905]
Probab=81.93 E-value=12 Score=32.53 Aligned_cols=102 Identities=10% Similarity=0.028 Sum_probs=47.3
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeee-eeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc-c
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLD-SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN-L 468 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~-~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~-~ 468 (604)
..|..++-- ..+.++-. ||.|+.|-.+ +++-. ......+..++.-. ...++- .|+.+..|.....-... .
T Consensus 26 ~~i~~va~G--~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~--~~~~al-~dg~v~~wG~~~~gq~~~~ 99 (273)
T d1jtdb_ 26 SGVDAIAGG--YFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN--YHSLAL-KDGEVIAWGGNEDGQTTVP 99 (273)
T ss_dssp SSEEEEEEC--SSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECS--SEEEEE-ETTEEEEEECCTTSTTCCC
T ss_pred CCcEEEEcc--CCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecCC--Cceeee-eeeeeeccCCCcceeeccc
Confidence 456666652 22333334 8999999663 32211 11112344444322 222222 47889999764422111 1
Q ss_pred ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 469 LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
......+..++..... .+ ...|+.+..|.-..
T Consensus 100 ~~~~~~~~~i~~~~~~--~~-~~~dg~v~~~g~~~ 131 (273)
T d1jtdb_ 100 AEARSGVDAIAAGAWA--SY-ALKDGKVIAWGDDS 131 (273)
T ss_dssp GGGGSSCCEEEEETTE--EE-EEETTEEEEEECCT
T ss_pred cccccceeEEeeeccc--cc-ccccccceecccCC
Confidence 1112334444443222 22 22578888887443
|
| >d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: GyrA/ParC C-terminal domain-like family: GyrA/ParC C-terminal domain-like domain: DNA gyrase A C-terminal domain species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
Probab=81.67 E-value=17 Score=32.22 Aligned_cols=188 Identities=10% Similarity=0.015 Sum_probs=107.6
Q ss_pred eEEEEECCCeEEEEEeCCCC-----ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-ceEEEEEECCCceEEEE--
Q psy10566 315 KLATGSKDTTVIIWDVDPVT-----FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVK-- 386 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~-----~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~-- 386 (604)
.+++.+.+|.|+--...... +.+.....+..+..-+..+.-+..+. |+.-+..| ...+.+|++........
T Consensus 3 vvv~ls~~GyiKR~~~~~~~~q~rg~~g~~~~~~k~~D~v~~~~~~~t~d~-ll~fT~~G~~~~i~~~~ip~~~~~~~G~ 81 (304)
T d1suua_ 3 IVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDY-LFMISNEGKLYLINAYEIKDSSRASKGQ 81 (304)
T ss_dssp EEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCE-EEEEETTSEEEEEEGGGSCC-------C
T ss_pred EEEEEECCCeEEEeeHHHHhhccCCCCCcccccccCCCEEEEEEEecCCCe-EEEEechHhhcChhhhhccccccccccc
Confidence 56788899999877665211 11111222344444444444444444 44444444 23455666554321111
Q ss_pred -----ecCCCCCCeEEEEEec---CCCEEEEEecCCeEEEEEcCC------Ceeee---eeceeEEEEEEcCCCCEEEEE
Q psy10566 387 -----LNHSPEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIEG------QVLDS---WEGVRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 387 -----~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~------~~~~~---~~~~~v~~l~~s~~g~~l~~~ 449 (604)
+.......+..+.-.+ ...+++..+.+|.|+-.++.. +.+.. -.+..+..+.....+..++..
T Consensus 82 ~i~~l~~l~~~e~i~~~~~~~~~~~~~~l~~~T~~G~iKr~~l~~f~~~~~~~~~a~kL~~~D~lv~v~~~~~~~~v~~~ 161 (304)
T d1suua_ 82 NISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICL 161 (304)
T ss_dssp BGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEE
T ss_pred ccceeeeeccccccccccccccccccceEEEEEehhhhhhcccchhhccccccceeecccchhhccccccccccceeEee
Confidence 1112233444433322 456899999999999887731 11111 112355566666777788899
Q ss_pred eCCCeEEEEEcCCCcccc---------cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 450 DTHHRIRTYNFEHLTDSN---------LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~---------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
+..|....++........ .+.....+..+...+++.++++.+.+|..+...+..
T Consensus 162 t~~G~~lrf~~~~v~~~gr~a~Gv~~i~L~~~d~v~~~~~~~~~~~ll~iT~~G~gKr~~~~e 224 (304)
T d1suua_ 162 SKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 224 (304)
T ss_dssp ETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred ccccceeeeccccccccCccccceeeecccccccceeeeeccCCceEEEEecCCceEEccchh
Confidence 999999989876533221 122355677777788888999999999998887754
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=81.55 E-value=22 Score=33.47 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=60.8
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEe--cC-----CCCCCeEEEEEecC---CCEEEEEec-----
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKL--NH-----SPEDSLTSCSWNRD---GTKFVCGGI----- 412 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~--~~-----~~~~~v~~~~~~~~---~~~l~s~~~----- 412 (604)
...++|+|.||++.+++--..| +|++++..++...... .. ........++|+|+ ..++.....
T Consensus 27 ~~P~~la~~pdg~llVter~~G--~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~ 104 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATG--KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTC--EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEeCCCeEEEEEecCC--EEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCC
Confidence 4577999999998887764456 8999998877543322 11 12345789999984 334433211
Q ss_pred --C----C--eEEEEEcCC--Cee-------ee---eeceeEEEEEEcCCCCEEEEEeC
Q psy10566 413 --R----G--QFYQCDIEG--QVL-------DS---WEGVRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 413 --d----g--~i~iwd~~~--~~~-------~~---~~~~~v~~l~~s~~g~~l~~~~~ 451 (604)
+ . .+..+..+. ... .. ...|....+.|.|||...++.+.
T Consensus 105 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd 163 (450)
T d1crua_ 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (450)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence 1 1 133333321 111 11 12356889999999987777654
|