Conserved Domains and Related Protein Families
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability Query
128
cd00117 79
LU Ly-6 antigen / uPA receptor -like domain; occur
98.76 smart00134 79
LU Ly-6 antigen / uPA receptor -like domain. Three
98.52 PF00021 77
UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor si
98.31 PF01064 83
Activin_recp: Activin types I and II receptor doma
98.1 PF00087 63
Toxin_1: Snake toxin; InterPro: IPR003571 Snake to
98.1 cd00206 64
snake_toxin Snake toxin domain, present in short a
97.94 PF05444 152
DUF753: Protein of unknown function (DUF753); Inte
97.32 PF06579 129
Ly-6_related: Caenorhabditis elegans ly-6-related
97.07 KOG3653|consensus 534
95.36 PF02988 83
PLA2_inh: Phospholipase A2 inhibitor; InterPro: IP
94.49 KOG2052|consensus 513
94.43 PF05444 152
DUF753: Protein of unknown function (DUF753); Inte
93.76 PF01684 82
ET: ET module; InterPro: IPR002603 The proteins in
86.66
>cd00117 LU Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor
Back Hide alignment and domain information
Probab=98.76 E-value=4e-08 Score=62.13 Aligned_cols=75 Identities=23% Similarity=0.495 Sum_probs=49.7
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC----CceEEEEceecCcccCcccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY----SKRRVVRGCGYINEERDDCY 78 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~----g~~~v~R~C~~~~~~~~~C~ 78 (128)
|+||+|.+..+..|..+ ++|+.. ..+|.|.+..+. ....+.|+|+........
T Consensus 1 L~C~~C~~~~~~~C~~~--------~~C~~~-------------~~~C~~~~~~~~~~~~~~~~~~rgC~~~C~~~~~-- 57 (79)
T cd00117 1 LECYSCTGVSTSSCSTE--------TNCPSP-------------DDQCLTAVATVIEESVRLSLVVRGCASDCPFTNV-- 57 (79)
T ss_pred CccCcCCCCCCCCCCCC--------CccCCC-------------CCEeeEEEEEEEeeccccceEECcccCCCCCCCc--
Confidence 78999988656688753 478852 778999877643 245688999995443210
Q ss_pred cccccCCceeEEEeeCCCCCCCC
Q psy10606 79 RRTGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 79 ~~~~~~~~~~~~C~C~~D~CN~a 101 (128)
...+........| |++|+||++
T Consensus 58 ~~~~~~~~~~~~C-C~tD~CN~~ 79 (79)
T cd00117 58 FGQLSITFLKVSC-CQEDLCNAA 79 (79)
T ss_pred cCccccceEeeee-CCCCccCCC
Confidence 0001112345678 999999985
Topology of these domains is similar to that of snake venom neurotoxins.
>smart00134 LU Ly-6 antigen / uPA receptor -like domain
Back Show alignment and domain information
Probab=98.52 E-value=3.5e-07 Score=57.88 Aligned_cols=72 Identities=24% Similarity=0.568 Sum_probs=46.4
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe--CC-ceEEEEcee--cCcccCccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI--YS-KRRVVRGCG--YINEERDDC 77 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~--~g-~~~v~R~C~--~~~~~~~~C 77 (128)
|+||.|.+..+..|.. .++|+.. ..+|.|++..+ .+ ...++|+|+ ........
T Consensus 1 L~C~~C~~~~~~~C~~--------~~~C~~~-------------~~~C~~~~~~~~~~~~~~~~~rgC~~~~~Cp~~~~- 58 (79)
T smart00134 1 LQCYSCTGNPDSSCSS--------EEECRSP-------------DDVCLTVVAEVISGSVGSVVYKGCATSPICPGSHS- 58 (79)
T ss_pred CcceecCCcCCCCCCC--------cceeCCC-------------CCEeEEEEEEEEecCCCceEEcCccCCCCCCCCcc-
Confidence 6899998876667865 3569852 78899886542 22 567899999 54332211
Q ss_pred ccccccCC--ceeEEEeeCCCCCC
Q psy10606 78 YRRTGTFD--VDSTYCACKGDICN 99 (128)
Q Consensus 78 ~~~~~~~~--~~~~~C~C~~D~CN 99 (128)
..+.+. ....+| |++|+||
T Consensus 59 --~~~~~~~~~~~~~C-C~tDlCN 79 (79)
T smart00134 59 --YEIHLTIANLKVSC-CQTDLCN 79 (79)
T ss_pred --ccccccEEEEeeEe-cCCCCCC
Confidence 011111 234577 9999999
Three-fold repeated domain in urokinase-type plasminogen activator receptor; occurs singly in other GPI-linked cell-surface glycoproteins (Ly-6 family, CD59, thymocyte B cell antigen, Sgp-2). Topology of these domains is similar to that of snake venom neurotoxins.
>PF00021 UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor similarity
Back Show alignment and domain information
Probab=98.31 E-value=2.9e-06 Score=51.74 Aligned_cols=73 Identities=26% Similarity=0.498 Sum_probs=46.5
Q ss_pred EEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--C--ceEEEEceecCcccCcccccc
Q psy10606 5 CYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--S--KRRVVRGCGYINEERDDCYRR 80 (128)
Q Consensus 5 CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g--~~~v~R~C~~~~~~~~~C~~~ 80 (128)
||+|.+..+..|.. .++|+.. ..+|..++..+. + ...++|+|+....-...=...
T Consensus 1 C~~C~~~~~~~C~~--------~~~C~~~-------------~~~C~~~~~~~~~g~~~~~~~~kgC~~~~~C~~~~~~~ 59 (77)
T PF00021_consen 1 CYSCYSPSSSSCSG--------EVTCPGS-------------EDVCYTATVTVTSGGNSVTLVSKGCATQSSCRFLSDFS 59 (77)
T ss_dssp EEEEECSTTTTSCT--------EEEECTT-------------TSEEEEEEEEEETTTCCEEEEEEEEEETTCCSEEEEEE
T ss_pred CCcccCCCCCCCCC--------CCCcCCC-------------CCeeEEEEEEeeecccCceEEEeeccccCCcccccccc
Confidence 89999987788975 2789952 678998877532 3 467889999543311000001
Q ss_pred cccCCceeEEEeeCCCCCC
Q psy10606 81 TGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 81 ~~~~~~~~~~C~C~~D~CN 99 (128)
..........| |++|+||
T Consensus 60 ~~~~~~~~~~C-C~~dlCN 77 (77)
T PF00021_consen 60 NGGIIKVSVSC-CNTDLCN 77 (77)
T ss_dssp SSSEECEEEEE-ESSTTTT
T ss_pred ccceeEEEEEe-CCCCCCC
Confidence 11112235688 9999999
; InterPro: IPR001526 CD59 (also called 1F-5Ag, H19, HRF20, MACIF, MIRL, P-18 or protectin) inhibits formation of membrane attack complex (MAC), thus protecting cells from complement mediated lysis. It has a signalling role, as a GPI-anchored molecule, in T cell activation and appears to have some role in cell adhesion through CD2 (controversial). CD59 associates with C9, inhibiting incorporation into C5b-8 preventing terminal steps in polymerisation of the (MAC) in plasma membranes. Genetic defects in GPI-anchor attachment that cause a reduction or loss of both CD59 and CD55 on erythrocytes produce the symptoms of the disease paroxysmal nocturnal haemoglobinuria (PNH). A variety of GPI-linked cell-surface glycoproteins are composed of one or more copies of a conserved domain of about 100 amino-acid residues [], []. Among these proteins, U-PAR contains three tandem copies of the domain, while all the others are made up of a single domain. As shown in the following schematic, this conserved domain contains 10 cysteine residues involved in five disulphide bonds - in U-PAR, the first copy of the domain lacks the fourth disulphide bond. +------+ +------------------------+ +---+ | | | | | | xCxxCxxxxxxCxxxxxCxxxxxCxxxxxxxxxxxxxxxxxxCxxxxCxxxxxxxxxxxxxxCCxxxCxxxxxxxx | | | | +---------------------+ +--------------+ 'C': conserved cysteine involved in a disulphide bond. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/).; PDB: 2I9B_H 1YWH_E 3BT2_U 2FD6_U 3U74_U 3BT1_U 3U73_U 2L03_A 3LAQ_V 2J8B_A ....
>PF01064 Activin_recp: Activin types I and II receptor domain; InterPro: IPR000472 Transforming growth factor-beta (TGF-beta) forms a family with other growth factors described in PDOC00223 from PROSITEDOC
Back Show alignment and domain information
Probab=98.10 E-value=6.5e-06 Score=52.25 Aligned_cols=74 Identities=26% Similarity=0.650 Sum_probs=51.9
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCC--ceEEEEceecCcccC----cc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYS--KRRVVRGCGYINEER----DD 76 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g--~~~v~R~C~~~~~~~----~~ 76 (128)
|+|| |++. .|.+. ...|.. ..+|.+.+...++ ...+.|||....... ..
T Consensus 1 l~C~-C~~~---~C~~~-------n~~C~t--------------~~~Cf~~~~~~~~~~~~~~~~GC~~~~~~~~~~~~~ 55 (83)
T PF01064_consen 1 LKCY-CDSD---DCNET-------NQTCET--------------GGFCFTSWEQDNGGGVEIVKKGCWSNEEDCPLCRNQ 55 (83)
T ss_dssp EEEE-EETT---CHCTT-------TEEEEE--------------SCEEEEEEEEETTESEEEEEEEEEESTGGGTTTSSS
T ss_pred CEeE-eCcc---cCCCC-------CCEeCC--------------CCEEEEEEEEeeccceeEEEcCccCCccCcceecce
Confidence 7899 9976 37642 145663 6889999888776 567889999876643 35
Q ss_pred cccccccCCceeEEEeeCCCCCCCCCC
Q psy10606 77 CYRRTGTFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 77 C~~~~~~~~~~~~~C~C~~D~CN~a~~ 103 (128)
|..... .....+|.|++|+||+...
T Consensus 56 C~~~~~--~~~~~~CC~~~D~CN~~~~ 80 (83)
T PF01064_consen 56 CRSSSS--PSSVVFCCCSGDFCNSNLS 80 (83)
T ss_dssp EEECSS--STCEEEEEESSTTGGGSEE
T ss_pred eeccCC--CCCeEEECCCCCccCCCCC
Confidence 765322 2567889668999998643
The receptors for most of the members of this growth factor family are related. These proteins are receptor-type kinases of Ser/Thr type PDOC00100 from PROSITEDOC), which have a single transmembrane domain and a specific hydrophilic Cys-rich ligand-binding domain [, , ]. The C-terminal part of the extracellular domain is conserved. Some of the receptors of this family contain subclass-specific N-terminal extensions of this homology domain. The type I receptors also possess 7 extracellular residues preceding the cysteine box.; GO: 0004675 transmembrane receptor protein serine/threonine kinase activity, 0005024 transforming growth factor beta-activated receptor activity, 0016020 membrane; PDB: 3EVS_C 1BTE_A 1LX5_B 2GOO_C 2HLR_A 4FAO_W 2H64_C 2H62_D 1S4Y_C 1NYU_C ....
>PF00087 Toxin_1: Snake toxin; InterPro: IPR003571 Snake toxins belong to a family of proteins [] which groups short and long neurotoxins, cytotoxins and short toxins, as well as a other miscellaneous venom peptides
Back Show alignment and domain information
Probab=98.10 E-value=2e-05 Score=48.14 Aligned_cols=43 Identities=30% Similarity=0.490 Sum_probs=30.9
Q ss_pred CCceE-EEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICR-KIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~-Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|. |+........+|+|||+...... . ......| |.+|.||
T Consensus 20 e~~Cy~k~~~~~~~~~~~~rGCa~tCP~~------~---~~~~v~C-C~TD~CN 63 (63)
T PF00087_consen 20 ENICYKKTWMDHPRGMRVERGCAATCPTP------K---PGEKVKC-CSTDKCN 63 (63)
T ss_dssp SSEEEEEEEEETSTEEEEEEEEESSSSSS------B---SSEEEEE-ESSTTTT
T ss_pred cCeeEEEEEecCCCCceEecchhccCcCC------C---CCCeEEE-cCCCCCC
Confidence 77898 55555446788999999865432 1 1345678 9999999
Most of these toxins act by binding to the nicotinic acetylcholine receptors in the postsynaptic membrane of skeletal muscles and prevent the binding of acetylcholine, thereby blocking the excitation of muscles. Snake toxins are proteins that consist of sixty to seventy five amino acids. Among the invariant residues are eight cysteines all involved in disulphide bonds. The structure is small, disulphide-rich, nearly all beta sheet.; GO: 0005576 extracellular region; PDB: 3NEQ_B 2H5F_A 3PLC_A 1NOR_A 1UG4_A 1FFJ_A 1CCQ_A 1CB9_A 1VB0_A 1ONJ_A ....
>cd00206 snake_toxin Snake toxin domain, present in short and long neurotoxins, cytotoxins and short toxins, and in other miscellaneous venom peptides
Back Show alignment and domain information
Probab=97.94 E-value=2.8e-05 Score=47.58 Aligned_cols=63 Identities=30% Similarity=0.490 Sum_probs=41.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe-CCceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI-YSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~-~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|.||.|.+. .+.. .+.|+.. +..|.|..... ....++.|||+.......
T Consensus 1 ~~C~~~~~~---~~~~--------~~tC~~g-------------e~~Cyk~~~~~~~~g~~i~rGCa~tCP~~~------ 50 (64)
T cd00206 1 LTCYNCPSP---FPFT--------TETCPDG-------------ENICYKKSWKDTPRGVRIERGCAATCPKVK------ 50 (64)
T ss_pred CCccCCCCC---CCCc--------ceeCCcc-------------cCccceeEEEcCCCCCEEEccccCcCcCCC------
Confidence 568888755 3332 4668741 67898774433 445679999999755321
Q ss_pred ccCCceeEEEeeCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICN 99 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN 99 (128)
. + ....| |.+|.||
T Consensus 51 -~-~-~~v~C-C~TD~CN 64 (64)
T cd00206 51 -P-G-EYVTC-CTTDKCN 64 (64)
T ss_pred -C-C-cceEe-cCCCCCC
Confidence 1 1 45688 9999999
The toxin acts by binding to the nicotinic acetylcholine receptors in the postsynaptic membrane of skeletal muscles and preventing the binding of acetylcholine, thereby blocking the excitation of muscles. This domain contains 60-75 amino acids that are fixed by 4-5 disulfide bridges and is nearly all beta sheet; it exists as either monomers or dimers.
>PF05444 DUF753: Protein of unknown function (DUF753); InterPro: IPR008472 This entry contains sequences which are repeated in several uncharacterised proteins from Drosophila melanogaster
Back Show alignment and domain information
Probab=97.32 E-value=0.00042 Score=49.12 Aligned_cols=74 Identities=31% Similarity=0.674 Sum_probs=45.3
Q ss_pred EecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCccc--Cccccccccc
Q psy10606 6 YQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEE--RDDCYRRTGT 83 (128)
Q Consensus 6 Y~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~--~~~C~~~~~~ 83 (128)
|+|+|..+++|.++ .......+.|+.. ...|+.++. +...++|||...... ...|....
T Consensus 1 ~~C~s~~~~~C~~~-~~~~~~~~~C~~~-------------~~~C~t~~~---~~~~~~RGC~~~~~~~~~~~C~~~~-- 61 (152)
T PF05444_consen 1 YSCDSCEDPNCTDP-DPSTSATEECPQQ-------------DDQCYTRFD---DDGTTIRGCLSDLPAEEQSSCSAGN-- 61 (152)
T ss_pred CCccCCcCCCCCCC-CCCceecccCCCC-------------CCCCEEEEe---CCCceEcCchhhcchhhcccccCCC--
Confidence 67888879999322 2223335788852 344987763 333499999987542 22554221
Q ss_pred CCceeEEE-eeCCCCCCCCC
Q psy10606 84 FDVDSTYC-ACKGDICNGSP 102 (128)
Q Consensus 84 ~~~~~~~C-~C~~D~CN~a~ 102 (128)
...| .|.+++||.+.
T Consensus 62 ----~~~C~~C~~~~CN~~~ 77 (152)
T PF05444_consen 62 ----DANCVTCSGDGCNNAV 77 (152)
T ss_pred ----CCcccCcCCCCCCCcc
Confidence 1267 88888888854
>PF06579 Ly-6_related: Caenorhabditis elegans ly-6-related protein; InterPro: IPR010558 This family consists of several Caenorhabditis elegans specific ly-6-related HOT and ODR proteins
Back Show alignment and domain information
Probab=97.07 E-value=0.0016 Score=45.23 Aligned_cols=55 Identities=33% Similarity=0.609 Sum_probs=35.5
Q ss_pred CCceEEEEEE--eCC---ceEEEEceecC----cccC----------ccccccc------------ccCCceeEEEeeCC
Q psy10606 47 PVICRKIIQK--IYS---KRRVVRGCGYI----NEER----------DDCYRRT------------GTFDVDSTYCACKG 95 (128)
Q Consensus 47 ~~~C~Ki~~~--~~g---~~~v~R~C~~~----~~~~----------~~C~~~~------------~~~~~~~~~C~C~~ 95 (128)
++.|+.+++. +.| ...+||||+.. +.++ +.|..-. ......+..|.|.+
T Consensus 44 ~s~Cvtl~e~~~~~gg~~~~~yIRGC~~~I~~~G~n~t~t~~~~~~~~~C~~~~~s~Lf~~~~~~~~~~~~~v~vCsC~g 123 (129)
T PF06579_consen 44 SSICVTLFEPLDIFGGTRGFGYIRGCLDSILRHGFNDTITLSFLDRRDICRRLRLSQLFPPGRRREHPSDSTVQVCSCYG 123 (129)
T ss_pred CchheeeEeccccccccccccEEEcCHHHHHHhCCCCchHHHHhcCCCeeeeccHHHhcCcccccccCCCCeEEEEEECC
Confidence 4669999876 233 46789999953 1111 2465311 11235688999999
Q ss_pred CCCCCC
Q psy10606 96 DICNGS 101 (128)
Q Consensus 96 D~CN~a 101 (128)
|+||+|
T Consensus 124 d~CN~s 129 (129)
T PF06579_consen 124 DRCNGS 129 (129)
T ss_pred CccCCC
Confidence 999986
These proteins are involved in the olfactory system. Odr-2 mutants are known to be defective in the ability to chemotax to odorants that are recognised by the two AWC olfactory neurons. Odr-2 encodes a membrane-associated protein related to the Ly-6 superfamily of GPI-linked signalling proteins [].
>KOG3653|consensus
Back Show alignment and domain information
Probab=95.36 E-value=0.13 Score=42.92 Aligned_cols=56 Identities=20% Similarity=0.366 Sum_probs=35.5
Q ss_pred CCceEEEEEEeCCce-EEEEceecCcc------cCcccccccccCC-ceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKR-RVVRGCGYINE------ERDDCYRRTGTFD-VDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~-~v~R~C~~~~~------~~~~C~~~~~~~~-~~~~~C~C~~D~CN~a~ 102 (128)
...|..+.....|.. .+..||..... +...|........ ....+|.|.+|.||.-.
T Consensus 66 ~~~C~avW~~t~~~~~~v~qGC~~~~~D~~~c~~~~eCv~s~~~~~g~t~~~CcCs~~~CN~n~ 129 (534)
T KOG3653|consen 66 GRHCFAVWNKTSGTIEVVKQGCWSHITDDINCEDSSECVVSAEPPPGQTLYFCCCSTDFCNANF 129 (534)
T ss_pred CCceEEEeeccCCceeEEeecCccccCCccccccccccccCCCCCCCCeEEEEecCCCcccCCc
Confidence 448998877655554 55689995321 1225655443332 24789999999999643
>PF02988 PLA2_inh: Phospholipase A2 inhibitor; InterPro: IPR004126 Proteins in this entry inhibit basic phospholipase A2 isozymes in snake's venom [, ]
Back Show alignment and domain information
Probab=94.49 E-value=0.23 Score=31.90 Aligned_cols=75 Identities=20% Similarity=0.469 Sum_probs=45.7
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe--CCc--eEEEEceecCcccC-cccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI--YSK--RRVVRGCGYINEER-DDCY 78 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~--~g~--~~v~R~C~~~~~~~-~~C~ 78 (128)
.|..|.+. .++|.-+ ..+|... ...|.+++..+ .|. ..+.|+|.....-. +.=.
T Consensus 2 ~CEvC~~~-G~~C~G~-------~~tC~~~-------------eDtC~~~~~E~~~~~~s~~~~~K~C~~S~~C~~~~~~ 60 (83)
T PF02988_consen 2 SCEVCHGS-GKDCSGK-------MKTCEDG-------------EDTCVTVVTEVSSAGVSFRTTHKGCFSSSDCHLGYVS 60 (83)
T ss_pred CcceecCc-CCCCCCC-------eeEcCCC-------------CCEEEEEEEEeccCCeEEEEEEecccCccccCCCCEE
Confidence 58889987 4788654 5678852 67799997764 233 34579999864411 1000
Q ss_pred cccc--cCCceeEEEeeCCCCCCC
Q psy10606 79 RRTG--TFDVDSTYCACKGDICNG 100 (128)
Q Consensus 79 ~~~~--~~~~~~~~C~C~~D~CN~ 100 (128)
...+ .+.....+| |.+|+||.
T Consensus 61 ~n~g~~~y~rs~~~C-C~gd~C~~ 83 (83)
T PF02988_consen 61 TNMGHGDYMRSRIHC-CQGDGCNT 83 (83)
T ss_pred EecCCCCEEEeeeee-ECCCccCC
Confidence 0111 122345678 99999984
; GO: 0004859 phospholipase inhibitor activity, 0005576 extracellular region
>KOG2052|consensus
Back Show alignment and domain information
Probab=94.43 E-value=0.41 Score=39.92 Aligned_cols=53 Identities=26% Similarity=0.477 Sum_probs=35.4
Q ss_pred CCceEEEEEE-eCCceEEEEceecCcccCcccccc---cccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQK-IYSKRRVVRGCGYINEERDDCYRR---TGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~-~~g~~~v~R~C~~~~~~~~~C~~~---~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.+.+.. .+|+....|||....+..-.|... ..+...+..+| |++|+||.
T Consensus 53 ~g~C~~s~~~~~~g~~~~~~gC~~~~~~~~~~~~~~~~~~s~~~~~~~C-C~~d~CN~ 109 (513)
T KOG2052|consen 53 DGACFVSVEENDDGKEQHHRGCMTLEESLPRCNPFKCAHSSPDFRNIEC-CYGDYCNN 109 (513)
T ss_pred cCeEEEEEEecCCCceEEEecccccccccccCCCccccCCCCCceEEEe-cCcccccc
Confidence 6789888874 556778899999865422122211 11224678899 99999994
>PF05444 DUF753: Protein of unknown function (DUF753); InterPro: IPR008472 This entry contains sequences which are repeated in several uncharacterised proteins from Drosophila melanogaster
Back Show alignment and domain information
Probab=93.76 E-value=0.25 Score=34.85 Aligned_cols=52 Identities=27% Similarity=0.432 Sum_probs=33.0
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINE 72 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~ 72 (128)
.|+||+|. .+++|..+ .......|+... ....|...+. ....|.|||...-.
T Consensus 82 ~~~C~qC~--~~~~C~~~---~~~~~~~C~~~~-----------~~d~Cyt~~~---~~~~~~RGC~s~l~ 133 (152)
T PF05444_consen 82 RLSCYQCT--DDSDCVSS---DSSTAKPCPNYS-----------EDDQCYTRVD---DGGVVERGCLSDLE 133 (152)
T ss_pred CCEeeeCC--CCCCCCCC---CCcCcCcCcCCC-----------CCCcCEEEEe---eCCEEEeCCCCccc
Confidence 47899999 67899211 123356677421 1556877765 33458999998754
>PF01684 ET: ET module; InterPro: IPR002603 The proteins in this entry have no known function, and are found in Caenorhabditis elegans and in Caenorhabditis briggsae
Back Show alignment and domain information
Probab=86.66 E-value=2.9 Score=26.77 Aligned_cols=53 Identities=17% Similarity=0.333 Sum_probs=37.7
Q ss_pred CceEEEEE-EeCCceEEEEceecCcc----cC-cccccccccCCceeEEEeeC-CCCCCCCC
Q psy10606 48 VICRKIIQ-KIYSKRRVVRGCGYINE----ER-DDCYRRTGTFDVDSTYCACK-GDICNGSP 102 (128)
Q Consensus 48 ~~C~Ki~~-~~~g~~~v~R~C~~~~~----~~-~~C~~~~~~~~~~~~~C~C~-~D~CN~a~ 102 (128)
..|.++.. .++|...++=.|.+... +. +.|... ..+..++.|.|+ +|.||...
T Consensus 22 G~CaSvs~~~~ng~~~t~y~C~P~~vC~~L~l~n~C~~i--~~~~~vtgCCC~~~dnC~~p~ 81 (82)
T PF01684_consen 22 GQCASVSITTYNGHNVTLYTCDPTSVCRSLNLNNSCNTI--EGGREVTGCCCNNSDNCNDPT 81 (82)
T ss_pred CEEEEEEEEeECCceEEEEEechHHHHhhhcccCccccc--CCCCcEEEEECCCCccccCCC
Confidence 46999988 89998888889998654 11 256433 233357888788 99999753
Each repeat contains 8-10 conserved cysteines that probably form 4-5 disulphide bridges. By inspection of the conservation of cysteines it looks like cysteines 1, 2, 3, 4, 9 and 10 are always present and that sometimes the pair 5 and 8 or the pair 6 and 7 are missing. This suggests that cysteines 5/8 and 6/7 make disulphide bridges.
Homologous Structure Templates
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
ID Alignment Graph Length
Definition
Probability Query 128
2l03_A 74
LY-6/neurotoxin-like protein 1; LYNX1, acetylcholi
98.81 2j8b_A 79
CD59 glycoprotein; lipid-binding protein, lipid-bi
98.78 3neq_A 66
Muscarinic M1-toxin1, muscarinic toxin 1; chimeric
98.63 2h7z_B 77
Irditoxin subunit B; three-finger toxin, neurotoxi
98.54 2h7z_A 75
Irditoxin subunit A; three-finger toxin, neurotoxi
98.4 2pjy_C 79
TGF-beta receptor type-1; ternary complex, three f
98.38 2jqp_A 65
WEAK toxin 1; protein; NMR {Bungarus candidus}
98.36 1ff4_A 65
Muscarinic toxin/acetylcholine receptor binding P;
98.34 1hc9_A 74
Alpha-bungarotoxin; toxin/peptide, complex (toxin/
98.34 2h5f_A 77
Denmotoxin; three-finger toxin, neurotoxin, snake
98.32 2l5s_A 88
TGF-beta receptor type-1; ALK5, transforming growt
98.28 1ywh_A 313
Urokinase plasminogen activator surface receptor;
98.23 1vyc_A 65
Bucain, neurotoxin; snake neurotoxin; NMR {Bungaru
98.2 1jgk_A 66
Candoxin; beta sheet, snake venom protein, toxin;
98.16 1ntn_A 72
Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja
98.16 1kba_A 66
Kappa-bungarotoxin; 2.30A {Bungarus multicinctus}
98.1 1cvo_A 62
Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.
98.05 1mr6_A 68
Neurotoxin; venom; NMR {Bungarus multicinctus} SCO
98.03 3era_A 62
Erabutoxin A; snake neurotoxin, venom, postsynapti
97.87 3hh7_A 65
Muscarinic toxin-like protein 3 homolog; haditoxin
97.83 3laq_U 277
UPAR, U-PAR, urokinase plasminogen activator surfa
97.82 3laq_U 277
UPAR, U-PAR, urokinase plasminogen activator surfa
97.82 1lsi_A 66
LSIII; venom, multigene family, neurotoxin; NMR {L
97.78 1vb0_A 61
Cobrotoxin B; short-chain neurotoxin, three-finger
97.76 3evs_C 119
Bone morphogenetic protein receptor type-1B; ligan
97.75 3plc_A 63
Beta-cardiotoxin OH-27; beta-sheet, novel cardioto
97.74 1ntx_A 60
Alpha-neurotoxin; NMR {Dendroaspis polylepis polyl
97.72 2h62_C 129
Bone morphogenetic protein receptor type IA; TGF-b
97.72 4aea_A 71
Long neurotoxin 1; three-finger toxin, nicotinic a
97.68 1f94_A 63
Bucandin; three-finger snake presynaptic neurotoxi
97.62 3vts_A 61
Cytotoxin 1; three finger toxin, venom toxin; 2.43
97.56 2fd6_U 276
Urokinase plasminogen activator surface receptor;
97.36 1ug4_A 60
Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {
97.32 1tfs_A 60
Toxin FS2; NMR {Dendroaspis polylepis polylepis} S
97.21 1fas_A 61
Fasciculin 1; toxin; 1.80A {Dendroaspis angusticep
97.12 1ywh_A 313
Urokinase plasminogen activator surface receptor;
97.0 2fd6_U 276
Urokinase plasminogen activator surface receptor;
96.72 4fao_C 106
Serine/threonine-protein kinase receptor R3; TGF-b
96.66 1drs_A 59
Dendroaspin; cell adhesion protein; NMR {Dendroasp
96.11 2h62_D 98
ACVR2B protein; TGF-beta superfamily, ligand-recep
94.68 1bte_A 97
Protein (activin receptor type II); serine kinase,
94.43 4fao_E 124
Activin receptor type-2B; TGF-beta, CTK, cystine k
94.18 2hlr_A 100
Bone morphogenetic protein receptor type-2; three-
93.84
>2l03_A LY-6/neurotoxin-like protein 1; LYNX1, acetylcholine receptor, endogenic neuromodulator, Thr toxins, signaling protein; NMR {Homo sapiens}
Back Hide alignment and structure
Probab=98.81 E-value=3.1e-08 Score=61.22 Aligned_cols=72 Identities=22% Similarity=0.434 Sum_probs=48.5
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE-eCCceEEEEceecCcccCcccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK-IYSKRRVVRGCGYINEERDDCYRR 80 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~-~~g~~~v~R~C~~~~~~~~~C~~~ 80 (128)
.|+||+|.+ ....|.. .+.|+. ...+|.|.... .....+|.|+|+........
T Consensus 1 ~L~C~~C~~-~~~~c~~--------~~~C~~-------------~~~~C~t~~~~~~~~~~~v~rgC~~~Cp~~~~---- 54 (74)
T 2l03_A 1 MLDCHVCAY-NGDNCFN--------PMRCPA-------------MVAYCMTTRTYYTPTRMKVSKSCVPRCFETVY---- 54 (74)
T ss_dssp CCEEECEEE-SSSCCCC--------EEECCT-------------TCCEEEEEEEEEETTEEEEEEEEESCCCCCCC----
T ss_pred CCEeeECCC-CCCcCCC--------CeEcCC-------------CCCEEEEEEEEccCCCceEeccccCcCcCCcc----
Confidence 489999996 3457754 478985 17889887553 33457889999976554321
Q ss_pred cccCC-ceeEEEeeCCCCCCC
Q psy10606 81 TGTFD-VDSTYCACKGDICNG 100 (128)
Q Consensus 81 ~~~~~-~~~~~C~C~~D~CN~ 100 (128)
.+.+. .....| |++|+||+
T Consensus 55 ~~~~~~~~~v~C-C~tDlCN~ 74 (74)
T 2l03_A 55 DGYSKHASTTSC-CQYDLCNG 74 (74)
T ss_dssp CSSSCCSEEEEE-ECSTTTTC
T ss_pred ccccccceEeEe-CCCCCCCC
Confidence 11111 246788 99999995
>2j8b_A CD59 glycoprotein; lipid-binding protein, lipid-binding protein MAC, membrane, GPI-anchor, complement, lipoprotein; 1.15A {Homo sapiens} SCOP: g.7.1.3 PDB: 2ux2_A 2uwr_A 1cdq_A 1cdr_A* 1cds_A* 2ofs_A 1erg_A 1erh_A
Back Show alignment and structure
Probab=98.78 E-value=1.3e-08 Score=64.08 Aligned_cols=74 Identities=27% Similarity=0.449 Sum_probs=49.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCc-cccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERD-DCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~-~C~~~~ 81 (128)
|+||+|.... ..|.. +++|+.. ..+|+.+.. ...+.|+|+....-.+ . ....
T Consensus 2 L~Cy~C~~~~-~~C~~--------~~~C~~~-------------~d~C~t~~~----~~~~~k~C~~~~~C~~~~-~~~~ 54 (79)
T 2j8b_A 2 LQCYNCPNPT-ADCKT--------AVNCSSD-------------FDACLITKA----GLQVYNKCWKFEHCNFND-VTTR 54 (79)
T ss_dssp CEEECCSSCC-TTCCC--------EEECCTT-------------CCEEEEEEE----TTEEEEEEECGGGCSHHH-HHHH
T ss_pred cCCcCCCCCC-CCCcc--------ceecCCC-------------CCEeEEEEe----CCeeEecccCccCCCchh-hcch
Confidence 8999999775 67875 4799852 568987766 2367899998543211 1 1111
Q ss_pred ccCCceeEEEeeCCCCCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
.........| |++||||+++.+
T Consensus 55 ~~~~~~~~~C-C~~DLCN~~~~~ 76 (79)
T 2j8b_A 55 LRENELTYYC-CKKDLCNFNEQL 76 (79)
T ss_dssp HTCSSCEEEE-ECSTTCCCGGGC
T ss_pred hccCCcceEE-CCcccCCCCcCc
Confidence 0122356788 999999999765
>3neq_A Muscarinic M1-toxin1, muscarinic toxin 1; chimeric muscarinic toxin, HM1-muscarinic receptor, snake to green mamba; 1.25A {Dendroaspis angusticeps} PDB: 2vlw_A* 3fev_A 4do8_A
Back Show alignment and structure
Probab=98.63 E-value=2.5e-07 Score=56.06 Aligned_cols=65 Identities=26% Similarity=0.425 Sum_probs=46.8
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe-CCceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI-YSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~-~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.+. .|.. .+.|+. .+.+|.|+.... .+..+|.|||+...... .
T Consensus 1 l~C~~~~~~---~~~~--------~~tC~~-------------g~~~C~~~~~~~~~~~~~i~rGCa~~Cp~~------~ 50 (66)
T 3neq_A 1 LTCVKSNSI---WFPT--------SEDCPD-------------GQNLCFKRWQYISPRMYDFTRGCAATCPKP------T 50 (66)
T ss_dssp CEEEEBCSS---SCCE--------EEECCT-------------TCCEEEEEEEEEETTEEEEEEEEESSCCCC------S
T ss_pred CCCccCCCC---CCCc--------ceEcCC-------------CCCEEeEEEEecCCCCCEEeCCCcCcCCCC------C
Confidence 689999976 3432 468885 278899886665 45678999999865532 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.+.....| |++|+||.
T Consensus 51 --~~~~~v~C-C~TD~CN~ 66 (66)
T 3neq_A 51 --NVRETIRC-CGTDKCNK 66 (66)
T ss_dssp --STTEEEEE-ECSTTTTC
T ss_pred --CCCCEeeE-CCCCCCCC
Confidence 12356788 99999994
>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Back Show alignment and structure
Probab=98.54 E-value=4.6e-07 Score=56.64 Aligned_cols=66 Identities=21% Similarity=0.510 Sum_probs=45.9
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe--CCceEEEEceecCcccCccccccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI--YSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~--~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
+||+|+......|.. .+.|+.. ..+|.|..... .|..+|.|||+...... .
T Consensus 9 ~C~~C~~~~s~~c~~--------~~tCp~g-------------~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~------~ 61 (77)
T 2h7z_B 9 LCFECNRETCSNCFK--------DNRCPPY-------------HRTCYTLYRPDGNGEMKWAVKGCAKTCPTA------Q 61 (77)
T ss_dssp EECCEETTTCCSCSS--------CEECCTT-------------CCEEEEEEEECSSSCEEEEEEEEESSCCCC------C
T ss_pred ccccCCCCccCCCcc--------CcCcCCC-------------cCEEeEEEEecCCCCceeEeCCcCCcCcCC------C
Confidence 899999876556653 4679851 67898886654 23334899999865432 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
. .....| |++|+||.
T Consensus 62 -~--~~~v~C-C~TD~CN~ 76 (77)
T 2h7z_B 62 -P--GESVQC-CNTPKCND 76 (77)
T ss_dssp -T--TCEEEE-ECSTTTTC
T ss_pred -C--CceeEe-cCCCCCCC
Confidence 1 145788 99999995
>2h7z_A Irditoxin subunit A; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Back Show alignment and structure
Probab=98.40 E-value=1.3e-06 Score=54.39 Aligned_cols=64 Identities=20% Similarity=0.608 Sum_probs=45.0
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-CceE-EEEceecCcccCccccccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-SKRR-VVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g~~~-v~R~C~~~~~~~~~C~~~~ 81 (128)
+||+|+......|.. .+.| . ...|.|...... ...+ |.|||+....... .
T Consensus 9 ~C~~C~~~~s~~~~~--------~~tC-g--------------e~~Cyk~~~~~~~~g~~~i~rGCaatCP~~~-----~ 60 (75)
T 2h7z_A 9 LCFECNRMTSSDCST--------ALRC-Y--------------RGSCYTLYRPDENCELKWAVKGCAETCPTAG-----P 60 (75)
T ss_dssp EEECEETTTCCCTTC--------EEEE-C--------------SSEEEEEEEECTTSCEEEEEEEEESSCCCCC-----T
T ss_pred cccCCCCcccCCCCc--------cCCc-C--------------CCEeEeEEEeCCCCCceeEeCCccCcCcCCC-----C
Confidence 799999887556643 4678 4 788988866542 2344 9999999755321 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |.+|+||.
T Consensus 61 ----~~~v~C-CsTD~CN~ 74 (75)
T 2h7z_A 61 ----NERVKC-CRSPRCND 74 (75)
T ss_dssp ----TCEEEE-ECSTTCCC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 135778 99999995
>2pjy_C TGF-beta receptor type-1; ternary complex, three finger toxin, cytokine-cytokine recep complex; 3.00A {Homo sapiens} PDB: 3kfd_I
Back Show alignment and structure
Probab=98.38 E-value=6.3e-07 Score=56.35 Aligned_cols=54 Identities=26% Similarity=0.407 Sum_probs=41.0
Q ss_pred CCceEEEEEEeCCceEEEEceecCcc----cCc-ccccccccCCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINE----ERD-DCYRRTGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~----~~~-~C~~~~~~~~~~~~~C~C~~D~CN~a 101 (128)
..+|.+.+...+|...+.|+|....+ ... .|.............| |++|+||..
T Consensus 19 ~g~Cf~sv~~~~g~~~~~~gC~~~~e~~p~~~~~~C~~~~~~~~~~~i~C-C~~D~CN~~ 77 (79)
T 2pjy_C 19 DGLCFVSVTETTDKVIHNSSCIAEIDLIPRDRPFVCAPSSKTGSVTTTYC-CNQDHCNKI 77 (79)
T ss_dssp SSEEEEEEECSSSCCEEEEEEECTTTSSSSSSCGGGCCHHHHTSSEEEEE-ECSTTCCCC
T ss_pred CCEEeEEEEECCCCEEEEECCCChhHcCCCCCCcEeCCCCCCCCceeeEE-CCccccCCC
Confidence 68899988878888889999998754 222 6875544334678889 999999964
>2jqp_A WEAK toxin 1; protein; NMR {Bungarus candidus}
Back Show alignment and structure
Probab=98.36 E-value=2.3e-06 Score=51.70 Aligned_cols=64 Identities=27% Similarity=0.550 Sum_probs=43.7
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEE-EEEeCCceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKI-IQKIYSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki-~~~~~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.|. .|.. .+.|+.. ...|.|. ........+|.|||+....... .
T Consensus 1 l~C~~~~s~---~~~~--------~~tC~~g-------------~~~Cyk~~~~~~~~g~~i~rGCa~tCP~~~-----~ 51 (65)
T 2jqp_A 1 LTCLICPEK---DCQK--------VHTCRNE-------------EKICVKRFYDKNQLGWRAQRGCAVSCPKAK-----P 51 (65)
T ss_dssp CEEEECSSS---SCCE--------EEECCSS-------------CCEEEEEEEEETTTEEEEEEEEESCCCCCC-----S
T ss_pred CCCccCCCC---CCcc--------ceEcCCC-------------cCEEEeeEEEccCCCCEEECCccCcCcCCC-----C
Confidence 689999864 3432 4678851 7889988 4433225789999999755421 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |++|+||.
T Consensus 52 ----~~~v~C-C~TD~CN~ 65 (65)
T 2jqp_A 52 ----NETVQC-CSTDKCNK 65 (65)
T ss_dssp ----SSEEEE-ECSTTTCC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 145778 99999994
>1ff4_A Muscarinic toxin/acetylcholine receptor binding P; three fingers motif; 1.50A {Dendroaspis angusticeps} SCOP: g.7.1.1
Back Show alignment and structure
Probab=98.34 E-value=1.6e-06 Score=52.46 Aligned_cols=64 Identities=23% Similarity=0.434 Sum_probs=43.7
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEE-EEEeCCceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKI-IQKIYSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki-~~~~~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.|. .|.. .+.|+.. ...|.|. ........+|.|||+....... .
T Consensus 1 l~C~~~~s~---~~~~--------~~tC~~g-------------~~~Cyk~~~~~~~~g~~i~rGCa~tCp~~~-----~ 51 (65)
T 1ff4_A 1 LTCVTTKSI---GGVT--------TEDCPAG-------------QNVCFKRWHYVTPKNYDIIKGCAATCPKVD-----N 51 (65)
T ss_dssp CEEEEECTT---SSEE--------EEECCTT-------------CCEEEEEEEESSSSCEEEEEEEESSCCCCC-----S
T ss_pred CCCccCCCC---CCcc--------CeEcCCC-------------cCEEeeeEEEecCCCCEEECCccCcCcCCC-----C
Confidence 689999964 3432 4678851 7889988 4433224789999999755431 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |++|+||.
T Consensus 52 ----~~~v~C-C~TD~CN~ 65 (65)
T 1ff4_A 52 ----NDPIRC-CGTDKCND 65 (65)
T ss_dssp ----CCCEEE-ECSTTTTC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 135788 99999994
>1hc9_A Alpha-bungarotoxin; toxin/peptide, complex (toxin/peptide), acetylcholine receptor mimitope, alpha-bungarotoxin, 3- finger; 1.8A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2qc1_A* 1abt_A 1bxp_A 1haa_A 1haj_A 1hc9_B 1hoy_A 1idg_A 1idh_A 1idi_A 1idl_A 1ik8_A 1ikc_A 1jbd_A 1kc4_A 1kfh_A 1kl8_A 1l4w_A 1ljz_A 1rgj_A ...
Back Show alignment and structure
Probab=98.34 E-value=2.8e-06 Score=52.64 Aligned_cols=67 Identities=22% Similarity=0.409 Sum_probs=45.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-C---ceEEEEceecCcccCcccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-S---KRRVVRGCGYINEERDDCY 78 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g---~~~v~R~C~~~~~~~~~C~ 78 (128)
|+||.|.+ .|.. .+.|+.. ...|.|...... + ..+|.|||+......
T Consensus 1 l~C~~~~~----~~~~--------~~tCp~g-------------~~~Cyk~~~~~~~~~~~g~~i~rGCa~tCP~~---- 51 (74)
T 1hc9_A 1 IVCHTTAT----SPIS--------AVTCPPG-------------ENLCYRKMWCDVFCSSRGKVVELGCAATCPSK---- 51 (74)
T ss_dssp CEEEETTS----SSCE--------EEECCTT-------------CCEEEEEEECCTTHHHHCCEEEEEEESSCCCC----
T ss_pred CCCccCCC----CCcc--------ceEeCCC-------------cCEEEeEEEECccccccCCEEeCCccCcCcCC----
Confidence 68999986 2321 4678852 788998865432 1 367999999965532
Q ss_pred cccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 79 RRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 79 ~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
. . .....| |++|+||.+...
T Consensus 52 --~-~--~~~i~C-C~TD~CN~~~~~ 71 (74)
T 1hc9_A 52 --K-P--YEEVTC-CSTDKCNPHPKQ 71 (74)
T ss_dssp --C-T--TCEEEE-ECSTTCSCCTTS
T ss_pred --C-C--CceeEe-cCCCCCCCcCCC
Confidence 1 1 145788 999999998743
>2h5f_A Denmotoxin; three-finger toxin, neurotoxin, snake venom; 1.90A {Boiga dendrophila} SCOP: g.7.1.1
Back Show alignment and structure
Probab=98.32 E-value=1.2e-06 Score=54.79 Aligned_cols=66 Identities=23% Similarity=0.531 Sum_probs=46.1
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCccccccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
+||+|+......|.. .+.|+.. ...|.|...... |..+|.|||+...... .
T Consensus 9 ~C~~C~~~~s~~c~~--------~~tCp~g-------------~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~------~ 61 (77)
T 2h5f_A 9 FCIQCNRKTWSNCSI--------GHRCLPY-------------HMTCYTLYKPDENGEMKWAVKGCARMCPTA------K 61 (77)
T ss_dssp EEECEESSSSSCTTS--------EEEEEET-------------CCEEEEEEECCSSSCCEEEEEEEESSCCCC------C
T ss_pred ccccCCCCcCCCCcc--------ccEeCCC-------------cCEEeeEEEeCCCCCccEEECCccCcCcCC------C
Confidence 899999876556643 4678841 678988855432 3378999999865532 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
. .....| |++|+||.
T Consensus 62 -~--~~~v~C-C~TD~CN~ 76 (77)
T 2h5f_A 62 -S--GERVKC-CTGASCNS 76 (77)
T ss_dssp -T--TCEEEE-ECSTTTTC
T ss_pred -C--CceeEe-cCCCCCCC
Confidence 1 145788 99999995
>2l5s_A TGF-beta receptor type-1; ALK5, transforming growth factor beta, type I receptor, SIGN protein; NMR {Homo sapiens}
Back Show alignment and structure
Probab=98.28 E-value=2.6e-06 Score=54.50 Aligned_cols=55 Identities=25% Similarity=0.350 Sum_probs=41.3
Q ss_pred CCceEEEEEEeCCceEEEEceecCcc----cC-cccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINE----ER-DDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~----~~-~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
..+|.+.+...+|...+.|||....+ .. -.|.............| |++|+||...
T Consensus 23 ~g~Cf~sv~~~~g~~~~~~gC~~~~e~~p~~~~~~C~~~~~~~~~~~i~C-C~~D~CN~~~ 82 (88)
T 2l5s_A 23 DGLCFVSVTETTDKVIHNSMCIAEIDLIPRDRPFVCAPSSKTGSVTTTYC-CNQDHCNKIE 82 (88)
T ss_dssp SSEEEEEEEECSSCEEEEEEEECGGGCSSSSSCGGGCSCCCSSTTEEEEE-ECSTTCGGGS
T ss_pred CCEEeEEEEECCCCEEEEECCCChhhcCCCCCceEecCCCCCCCceEeEe-CCccccCCCC
Confidence 67899998888887888899998754 11 16876554434678899 9999999754
>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3
Back Show alignment and structure
Probab=98.23 E-value=8.9e-07 Score=68.58 Aligned_cols=78 Identities=19% Similarity=0.409 Sum_probs=52.2
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYR 79 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~ 79 (128)
+|+||.|.+....+|... ....++|.. .+..|..+....+ +...++|||+.... |..
T Consensus 191 GL~CysC~~~~s~~Cs~e----~~~~v~CtG-------------~En~Clt~~g~~g~~~~~~~~KGCas~S~----C~~ 249 (313)
T 1ywh_A 191 GRQCYSCKGQSTHGCSSE----ETFLIDCRG-------------PMNQCLVATGTHEPKNQSYMVRGCATASM----CQH 249 (313)
T ss_dssp EEEEEEEEEBTTTBSSGG----GCEEEEEET-------------TCCEEEEEEECCSSSSCCEEEEEEECGGG----GTC
T ss_pred CCCCCCcccCCCCCCCCC----CccceecCC-------------CCCcceeeEeeeccCCceEEeccCCCccc----ccC
Confidence 589999998876678631 112478874 2888999988752 34678999997432 332
Q ss_pred c----cccCCceeEEEeeCCCCCCCC
Q psy10606 80 R----TGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 80 ~----~~~~~~~~~~C~C~~D~CN~a 101 (128)
. .........+| |++|+||++
T Consensus 250 ~~~~~~~~v~~~~isC-C~g~LCN~~ 274 (313)
T 1ywh_A 250 AHLGDAFSMNHIDVSC-CTKSGCNHP 274 (313)
T ss_dssp HHHHTSSCCSSCEEEE-ESSTTCCSS
T ss_pred CCccceecccceEeEc-CCCCCcCCc
Confidence 1 11111345788 999999998
>1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A
Back Show alignment and structure
Probab=98.20 E-value=2.5e-06 Score=51.57 Aligned_cols=64 Identities=23% Similarity=0.339 Sum_probs=43.0
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-CceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.|. .|.. .+.|+.. ...|.|.....+ ...+|.|||+....... .
T Consensus 1 l~C~~~~s~---~~~~--------~~tC~~g-------------~~~Cyk~~~~~~~~g~~i~rGCa~tCP~~~-----~ 51 (65)
T 1vyc_A 1 RKCLIKYSQ---ANES--------SKTCPSG-------------QLLCLKKWEIGNPSGKEVKRGCVATCPKPW-----K 51 (65)
T ss_dssp CEEEECCTT---SCCE--------EEECCTT-------------CCEEEEEECCSSSSCCCEEEEEESSCCCCC-----S
T ss_pred CCCccCCCC---CCcc--------ceEcCCC-------------cCEEEeeEEEecCCCCEEECCccCcCcCCC-----C
Confidence 689999864 3432 4678851 788988733222 24779999999755421 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |++|+||.
T Consensus 52 ----~~~i~C-C~TD~CN~ 65 (65)
T 1vyc_A 52 ----NEIIQC-CAKDKCNA 65 (65)
T ss_dssp ----CCCEEE-ESSSSCCC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 135788 99999994
>1jgk_A Candoxin; beta sheet, snake venom protein, toxin; NMR {Bungarus candidus} SCOP: g.7.1.1
Back Show alignment and structure
Probab=98.16 E-value=7e-06 Score=49.75 Aligned_cols=66 Identities=24% Similarity=0.380 Sum_probs=42.8
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCcccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTG 82 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~ 82 (128)
|+||.|.|. .|. ....+.|+.. ...|.|.........+|.|||+...... ..
T Consensus 1 l~C~~~~s~---~~~------~~~~~tC~~g-------------~~~Cyk~~~~~~~g~~i~rGCaatCP~~------~~ 52 (66)
T 1jgk_A 1 MKCKICNFD---TCR------AGELKVCASG-------------EKYCFKESWREARGTRIERGCAATCPKG------SV 52 (66)
T ss_dssp CEEEECCTT---SCS------CCEEEECCSS-------------SCEEEEEEECCSSCCEEECCEESCCCCC------SS
T ss_pred CCCccCCCC---CCc------CCCeeECCCC-------------cCEEeeeEEeCCCCCEEECCccCcCcCC------CC
Confidence 689999865 232 0124678851 7889887554322478999999975532 11
Q ss_pred cCCceeEEEeeCCCCCC
Q psy10606 83 TFDVDSTYCACKGDICN 99 (128)
Q Consensus 83 ~~~~~~~~C~C~~D~CN 99 (128)
. .....| |++|+||
T Consensus 53 ~--~~~v~C-C~TD~CN 66 (66)
T 1jgk_A 53 Y--GLYVLC-CTTDDCN 66 (66)
T ss_dssp S--CCEEEE-ECSTTCC
T ss_pred C--CCEeEe-cCCCCCC
Confidence 0 135778 9999999
>1ntn_A Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja oxiana} SCOP: g.7.1.1 PDB: 1w6b_A
Back Show alignment and structure
Probab=98.16 E-value=7.9e-06 Score=50.33 Aligned_cols=48 Identities=19% Similarity=0.339 Sum_probs=33.4
Q ss_pred CCceEEEEEEeC-C---ceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 47 PVICRKIIQKIY-S---KRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g---~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
...|.|...... + ..+|.|||+...... . . .....| |++|+||.+...
T Consensus 18 ~~~Cyk~~~~~~~~~~~g~~i~rGCaatCP~~------~-~--~~~v~C-C~TD~CN~~~~~ 69 (72)
T 1ntn_A 18 QNLCYTKTWCDAWCGSRGKVIELGCAATCPTV------E-S--YQDIKC-CSTDNCNPHPKQ 69 (72)
T ss_dssp CCEEEEEEECCTTHHHHCCEEEEEEESSCCCC------C-T--TEEEEE-ECSTTCCCCTTC
T ss_pred cCeEEeEEEecccccccCCeEeCCccCcCcCC------C-C--CceeEe-cCCCCCCCCCCc
Confidence 788998865432 1 367999999965532 1 1 145788 999999988743
>1kba_A Kappa-bungarotoxin; 2.30A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2nbt_A
Back Show alignment and structure
Probab=98.10 E-value=5.7e-06 Score=50.12 Aligned_cols=61 Identities=25% Similarity=0.353 Sum_probs=41.2
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC----CceEEEEceecCccc-Cccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY----SKRRVVRGCGYINEE-RDDC 77 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~----g~~~v~R~C~~~~~~-~~~C 77 (128)
|+||.|.+. ..+.|+.. ...|.|...... ...+|.|||+..... .
T Consensus 1 l~C~~~~~~--------------~~~tC~~g-------------~~~Cyk~~~~~~~~~~~g~~i~rGCa~tCP~~~--- 50 (66)
T 1kba_A 1 RTCLISPSS--------------TPQTCPNG-------------QDICFLKAQCDKFCSIRGPVIEQGCVATCPQFR--- 50 (66)
T ss_dssp CEEEETTTT--------------EEEECCTT-------------CCEEEEEEECCTTHHHHCCEEEEEEESSCCCCC---
T ss_pred CCCccCCCC--------------CccCCCCC-------------cCeEEEEEEeCccccccCCEEeCCccCcCcCCC---
Confidence 679988861 14568741 788998865433 136889999986443 2
Q ss_pred ccccccCCceeEEEeeCCCCCCC
Q psy10606 78 YRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 78 ~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
. . .....| |++|+||.
T Consensus 51 ---~-~--~~~i~C-C~TD~CN~ 66 (66)
T 1kba_A 51 ---S-N--YRSLLC-CTTDNCNH 66 (66)
T ss_dssp ---T-T--EEEEEE-ESSTTCCC
T ss_pred ---C-C--CceeEe-cCCCCCCC
Confidence 1 1 245788 99999994
>1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A
Back Show alignment and structure
Probab=98.05 E-value=1e-05 Score=48.32 Aligned_cols=43 Identities=30% Similarity=0.522 Sum_probs=30.3
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|...... ...+|.|||+...... . . .....| |++|+||
T Consensus 19 ~~~Cyk~~~~~~~~g~~i~rGCa~tCp~~------~-~--~~~i~C-C~TD~CN 62 (62)
T 1cvo_A 19 KNLCFKATLKKFPLKFPVKRGCADNCPKN------S-A--LLKYVC-CSTDKCN 62 (62)
T ss_dssp CCEEEEEEETTSSSCCCEEEEEESSCCCC------C-T--TEEEEE-ESSTTCC
T ss_pred cCEEeeeEEeCCCCCcEEeCCccCcCcCC------C-C--CcEeEe-cCCCCCC
Confidence 788988855322 3468999999975532 1 1 145788 9999999
>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1
Back Show alignment and structure
Probab=98.03 E-value=3.3e-06 Score=51.30 Aligned_cols=64 Identities=25% Similarity=0.492 Sum_probs=41.8
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-C---ceEEEEceecCcccCcccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-S---KRRVVRGCGYINEERDDCY 78 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g---~~~v~R~C~~~~~~~~~C~ 78 (128)
|+||.|.|. .|.. .+.|+.. ...|.|...... | ..+|.|||+......
T Consensus 1 l~C~~~~~~---~~~~--------~~tCp~g-------------~~~C~~~~~~~~~g~~~~~~i~rGCa~tCp~~---- 52 (68)
T 1mr6_A 1 MQCKTCSFY---TCPN--------SETCPDG-------------KNICVKRSWTAVRGDGPKREIRRECAATCPPS---- 52 (68)
T ss_dssp CBCCCCSSS---CCCS--------CCBCCTT-------------CCCEEEECCBCCSSSCCSBCCEEEECSSSSSC----
T ss_pred CCCcCCCCC---CCcc--------ccEeCCC-------------CCEEEEEEEecccCccccceEeCCccCcCcCC----
Confidence 689999864 3432 4678851 678988754332 3 267899998865432
Q ss_pred cccccCCceeEEEeeCCCCCCC
Q psy10606 79 RRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 79 ~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
. . .....| |++|+||.
T Consensus 53 --~-~--~~~v~C-C~TD~CN~ 68 (68)
T 1mr6_A 53 --K-L--GLTVFC-CTTDNCNH 68 (68)
T ss_dssp --C-S--SSCCCC-BSSSSCCC
T ss_pred --C-C--CceeEe-cCCCCCCC
Confidence 1 1 134678 99999994
>3era_A Erabutoxin A; snake neurotoxin, venom, postsynaptic neurotoxin; 1.70A {Laticauda semifasciata} SCOP: g.7.1.1 PDB: 2era_A
Back Show alignment and structure
Probab=97.87 E-value=0.00011 Score=43.86 Aligned_cols=61 Identities=21% Similarity=0.469 Sum_probs=39.2
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCcccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTG 82 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~ 82 (128)
|.||.+.|. .+.. .+.|+.. ...|.|.........+|.|||+ ... ..
T Consensus 1 l~C~~~~~~---~~~~--------t~tC~~g-------------~~~Cyk~~~~~~~g~~i~rGC~--CP~------~~- 47 (62)
T 3era_A 1 RICFNHQTS---QPQT--------TKTCSPG-------------ESSCYNKQWSDFRGTIIERGCG--CPT------VK- 47 (62)
T ss_dssp CEEECCCTT---SCCC--------EEECCTT-------------CCCEEEEEEEETTEEEEEEEES--CCC------CC-
T ss_pred CCccCCCCC---CCCC--------ceECCCC-------------cCeeeeeEEeCCCCCEEeeeCC--CCC------CC-
Confidence 578888865 2221 4678741 6789888554444458999995 322 11
Q ss_pred cCCceeEEEeeCCCCCC
Q psy10606 83 TFDVDSTYCACKGDICN 99 (128)
Q Consensus 83 ~~~~~~~~C~C~~D~CN 99 (128)
. .....| |.+|.||
T Consensus 48 ~--~~~v~C-C~TD~CN 61 (62)
T 3era_A 48 P--GIKLSC-CESEVCN 61 (62)
T ss_dssp T--TCEEEE-ECSTTCC
T ss_pred C--CceEEE-cCCCCCC
Confidence 1 235778 9999999
>3hh7_A Muscarinic toxin-like protein 3 homolog; haditoxin, three finger toxin, snake venom, neurotoxin, nicotinic acetylcholine receptors; 1.55A {Ophiophagus hannah} SCOP: g.7.1.0
Back Show alignment and structure
Probab=97.83 E-value=0.00016 Score=43.57 Aligned_cols=44 Identities=32% Similarity=0.552 Sum_probs=31.6
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|.........+|.|||+...... . .......| |++|+||
T Consensus 21 ~~~Cyk~~~~~~~g~~i~rGCaatCp~~------~--~~~~~v~C-CsTD~CN 64 (65)
T 3hh7_A 21 GYFCYKSSWIDGREGRIERGCTFTCPEL------T--PNGKYVYC-CRRDKCN 64 (65)
T ss_dssp TCEEEEEEEEETTEEEEEEEEESSCCCC------C--TTEEEEEE-ECSTTTT
T ss_pred CCeEeEEEEecCCCCEEeCcccCcCcCC------C--CCCCEeEE-CCCCCCC
Confidence 7789988666554578899999865432 1 11346788 9999999
>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}
Back Show alignment and structure
Probab=97.82 E-value=5.6e-05 Score=57.64 Aligned_cols=84 Identities=23% Similarity=0.442 Sum_probs=50.2
Q ss_pred CcceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE--e-CCc--eEEEEceecCcccCc
Q psy10606 1 VSIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK--I-YSK--RRVVRGCGYINEERD 75 (128)
Q Consensus 1 ~aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~--~-~g~--~~v~R~C~~~~~~~~ 75 (128)
.+|+||+|.+ .+.+|... ....++|+.. ..+|..++.. . ++. ..++|+|.....-..
T Consensus 92 ~sL~CysC~~-~~~sC~~G----~~~~~tC~~~-------------~d~C~~~vt~~t~~g~~~~~~~~K~C~~~s~C~g 153 (277)
T 3laq_U 92 RYLECASCTS-LDQSCERG----REQSLQCRYP-------------TEHCIEVVTLQSTERSLKDEDYTRGCGSLPGCPG 153 (277)
T ss_dssp -CCEEECEET-TTTCSSSS----CCCEEECSST-------------TCCEEEEEEEECTTCSCCCCSEEEEEEECSSCSE
T ss_pred cceEeEeCCC-CCCCccCC----CcceeECCCC-------------CCeeeEEEEEEeecCCcccceEEecCCCCCCCCC
Confidence 3699999998 57899521 0126899851 6789877664 2 332 466799975322111
Q ss_pred ccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 76 DCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 76 ~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
. ......+......| |++|+||.+..+
T Consensus 154 s-~~~~~~~~~~~~~C-C~tDlCN~~~~~ 180 (277)
T 3laq_U 154 T-AGFHSNQTFHFLKC-CNYTHCNGGPVL 180 (277)
T ss_dssp E-EEEECSSEEEEEEE-ESSTTTTCSSCC
T ss_pred c-eecccceEEEEEee-cCCcccCCCCCC
Confidence 1 11111111225678 999999988753
>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}
Back Show alignment and structure
Probab=97.82 E-value=2e-05 Score=60.16 Aligned_cols=80 Identities=24% Similarity=0.421 Sum_probs=52.8
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe--CCceEEEEceecCcccCccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI--YSKRRVVRGCGYINEERDDCYR 79 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~--~g~~~v~R~C~~~~~~~~~C~~ 79 (128)
.|+||.|.+....+|... ..+.++|... ++.|....... ++...++|||+.... |..
T Consensus 189 Gl~C~sC~~~~~~~C~~~----~~~~~~C~G~-------------et~C~~~~g~~~~g~~~~~~kGCat~S~----C~~ 247 (277)
T 3laq_U 189 GFQCYSCEGNNTLGCSSE----EASLINCRGP-------------MNQCLVATGLDVLGNRSYTVRGCATASW----CQG 247 (277)
T ss_dssp SCEEEEBCSSSSSSSSSS----SCEEEECCTT-------------CCEEEEECCC-----CCCCEEEEECSSS----SSS
T ss_pred ccCCCCcccCCCCCCCCC----CCcceEcCCC-------------CCcceEEEeEEecCceeEEecCCCCccc----cCC
Confidence 589999999877889742 1124789852 78898875443 234567899997533 332
Q ss_pred c-----cccCCceeEEEeeCCCCCCCCCC
Q psy10606 80 R-----TGTFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 80 ~-----~~~~~~~~~~C~C~~D~CN~a~~ 103 (128)
. ....+....+| |.+|+||+|..
T Consensus 248 ~~~~~~~~~~~~~~~sC-C~g~lCN~~~~ 275 (277)
T 3laq_U 248 SHVADSFPTHLNVSVSC-CHGSGCNSPTG 275 (277)
T ss_dssp SHHHHTSSCCSSCCEEE-ESSSGGGSCC-
T ss_pred CCcccceeeccceeeEe-cCCCCcCCCCC
Confidence 1 11223567889 99999999864
>1lsi_A LSIII; venom, multigene family, neurotoxin; NMR {Laticauda semifasciata} SCOP: g.7.1.1
Back Show alignment and structure
Probab=97.78 E-value=3e-05 Score=46.85 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=30.3
Q ss_pred CCceEEEEEEeC----CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIY----SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~----g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|...... ...+|.|||+...... . . .....| |++|+||.
T Consensus 17 ~~~Cyk~~~~~~~~~~rg~~i~rGCa~tCP~~------~-~--~~~i~C-C~TD~CN~ 64 (66)
T 1lsi_A 17 QEICYVKSWCNAWCSSRGKVLEFGCAATCPSV------N-T--GTEIKC-CSADKCNT 64 (66)
T ss_dssp CCEEEEEECCCTTCTTSCCCCEEEEESSCCCC------C-S--SCEEEE-ESSTTTTS
T ss_pred cCEEEEEEEECccccccCcEEeCCccCcCcCC------C-C--CceeEe-cCCccCCC
Confidence 788988855432 1467899999865532 1 1 135778 99999995
>1vb0_A Cobrotoxin B; short-chain neurotoxin, three-finger toxin; HET: SO4; 0.92A {Naja atra} SCOP: g.7.1.1 PDB: 1onj_A* 1je9_A 1nor_A 1iq9_A 1nea_A 3nds_A 1cod_A 1coe_A 1v6p_A 1g6m_A 1qkd_A 1qke_A 5ebx_A 1era_A 1fra_A 3ebx_A 6ebx_A 1nxb_A
Back Show alignment and structure
Probab=97.76 E-value=0.00021 Score=42.47 Aligned_cols=42 Identities=26% Similarity=0.421 Sum_probs=27.9
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|......-..+|.|||+ .... . . .....| |.+|.||.
T Consensus 20 ~~~Cyk~~~~~~~g~~i~rGCa--CP~~------~-~--~~~v~C-CsTD~CN~ 61 (61)
T 1vb0_A 20 ETNCYKKWWSDHRGTIIERGCG--CPKV------K-P--GVNLNC-CTTDRCNN 61 (61)
T ss_dssp CSCEEEEEEEETTEEEEEEEES--CCCC------C-T--TCEEEE-ECSTTTTC
T ss_pred cCeeEeeEEcCCCCCEEeeeCc--CCCC------C-C--CceEEe-cCCCCCCC
Confidence 4569887554332478999999 4432 1 1 135678 99999994
>3evs_C Bone morphogenetic protein receptor type-1B; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Mus musculus}
Back Show alignment and structure
Probab=97.75 E-value=5.4e-05 Score=50.90 Aligned_cols=58 Identities=19% Similarity=0.285 Sum_probs=40.1
Q ss_pred CCceEEEEEE-eCCceEEEEceecCcccCcccccccccCCceeEEEee-CCCCCCCCCCCC
Q psy10606 47 PVICRKIIQK-IYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCAC-KGDICNGSPSLG 105 (128)
Q Consensus 47 ~~~C~Ki~~~-~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C-~~D~CN~a~~~~ 105 (128)
..+|.+.+.. .+|+..+.|||.........|.........+...| | ++|+||....+.
T Consensus 43 ~g~Cf~sv~~~~~G~~~~~~GCl~~~~~~~~C~~~~~~~~~~~i~C-C~~~DfCN~~l~p~ 102 (119)
T 3evs_C 43 DGYCFTMIEEDDSGMPVVTSGCLGLEGSDFQCRDTPIPHQRRSIEC-CTERNECNKDLHPT 102 (119)
T ss_dssp SSEEEEEEEECTTCSEEEEEEEECSTTHHHHSSCCCCTTCCEEEEE-ECSSTTGGGGCCCC
T ss_pred CCEEEEEEEEcCCCcEEEEEcCCcccCCccccccCCcccCcceeec-cCCcCccCCCCccc
Confidence 6789998876 46888888999986422226765433333467799 9 899999754443
>3plc_A Beta-cardiotoxin OH-27; beta-sheet, novel cardiotoxin; 2.41A {Ophiophagus hannah} SCOP: g.7.1.1
Back Show alignment and structure
Probab=97.74 E-value=3.6e-05 Score=46.05 Aligned_cols=44 Identities=32% Similarity=0.529 Sum_probs=27.1
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|...... |..+|.|||+...... . . .....| |++|+||.
T Consensus 19 ~~~Cyk~~~~~~~~~~~i~rGCa~tCp~~------~-~--~~~v~C-C~TD~CN~ 63 (63)
T 3plc_A 19 QDKCVKMTIKKLPSKYDVIRGCIDICPKS------S-A--DVEVLC-CDTNKCNK 63 (63)
T ss_dssp CCEEEEEC--------CCEEEEESSCCCC------C-S--SCCEEE-ECSTTCC-
T ss_pred cCeEeEEEEecCCCCEEEeCCccCcCCCC------C-C--CceeEE-cCCCCCCC
Confidence 788988865543 3456899999865532 1 1 245788 99999993
>1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Back Show alignment and structure
Probab=97.72 E-value=0.00021 Score=42.35 Aligned_cols=42 Identities=26% Similarity=0.426 Sum_probs=28.4
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|......-..+|.|||+ .... . . .....| |.+|.||.
T Consensus 19 ~~~Cyk~~~~~~~g~~i~rGCa--CP~~------~-~--~~~v~C-CsTD~CN~ 60 (60)
T 1ntx_A 19 ENSCYKKYWRDHRGTIIERGCG--CPKV------K-P--GVGIHC-CQSDKCNY 60 (60)
T ss_dssp CSCEEEEEEECSSSEEEEEEES--CCCC------C-T--TSEEEE-ESSTTCCC
T ss_pred CcEeEeeEEcCCCCCEEeeECc--CCCC------C-C--CcEEEe-cCCCCCCC
Confidence 6779887554332478999999 4432 1 1 135678 99999994
>2h62_C Bone morphogenetic protein receptor type IA; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 2h64_B 3nh7_A 1rew_C 3qb4_B 2goo_B* 2qj9_D 2qja_C 2qjb_C 2k3g_A 1es7_B
Back Show alignment and structure
Probab=97.72 E-value=4.2e-05 Score=52.14 Aligned_cols=56 Identities=20% Similarity=0.324 Sum_probs=40.2
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccC-cccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEER-DDCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~-~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
...|.+.+...+ |+..+.|||.. .+.. ..|.............| |.+|+||.....
T Consensus 56 ~g~Cf~sv~~~~~G~~~~~~GCl~-~e~~~~~C~~~~~~~~~~~i~C-C~~D~CN~~l~p 113 (129)
T 2h62_C 56 NGHCFAIIEEDDQGETTLASGCMK-YEGSDFQCKDSPKAQLRRTIEC-CRTNLCNQYLQP 113 (129)
T ss_dssp SSEEEEEEEECSSSCEEEEEEEEC-STTHHHHHHCCTTCSSCEEEEE-ECSTTGGGGCCC
T ss_pred CCeEeEEEEEcCCCCEEEEeCCcC-ccCCcccccCCCCCCCcceeEe-cCccccCCCCCC
Confidence 677999888655 78888999998 3322 26765544334578899 999999985543
>4aea_A Long neurotoxin 1; three-finger toxin, nicotinic acetylcholine receptor; 1.94A {Naja kaouthia} SCOP: g.7.1.1 PDB: 1lxg_A 1lxh_A 1yi5_F 1ctx_A 2ctx_A 1txa_A 1txb_A
Back Show alignment and structure
Probab=97.68 E-value=0.00016 Score=44.38 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=32.0
Q ss_pred CceEEEEEEeC----CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 48 VICRKIIQKIY----SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 48 ~~C~Ki~~~~~----g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
..|.|...... ...+|.|||+...... . ......| |++|+||.-...
T Consensus 18 ~~Cyk~~~~~~~~~~~g~~i~rGCaatCP~~------~---~~~~v~C-CsTD~CN~~~~~ 68 (71)
T 4aea_A 18 HVCYTKTWCDAFCSIRGKRVDLGCAATCPTV------K---TGVDIQC-CSTDNCNPFPTR 68 (71)
T ss_dssp CEEEEEEECCTTHHHHCCEEEEEEESSCCCC------C---TTEEEEE-ECSTTCCCCCCC
T ss_pred CeEeEEEEecccccCCCcEEeCcccCcCcCC------C---CCceeEe-cCCCCCCCCccc
Confidence 67988755432 2357899999875532 1 1246788 999999987643
>1f94_A Bucandin; three-finger snake presynaptic neurotoxin; 0.97A {Bungarus candidus} SCOP: g.7.1.1 PDB: 1ijc_A
Back Show alignment and structure
Probab=97.62 E-value=2e-05 Score=47.26 Aligned_cols=61 Identities=28% Similarity=0.609 Sum_probs=40.9
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEE--ceecCcccCcccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVR--GCGYINEERDDCYRR 80 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R--~C~~~~~~~~~C~~~ 80 (128)
|+||.|.|. .|.. .+.|+.. ...|.|.... .+|.| ||+......
T Consensus 1 l~C~~~~~~---~~~~--------~~tC~~g-------------~~~Cyk~~~~----~~i~r~~GCaatCp~~------ 46 (63)
T 1f94_A 1 MECYRCGVS---GCHL--------KITCSAE-------------ETFCYKWLNK----ISNERWLGCAKTCTEI------ 46 (63)
T ss_dssp CEEEEEETT---EEEE--------EEECCTT-------------CCEEEEEEET----TTCCEEEEEESCCCCE------
T ss_pred CCCccCCCC---CCcc--------ccCcCCC-------------cCEEeeeEEE----eEEEEcCCccCcCcCC------
Confidence 689999864 3322 4578751 7889888543 66889 999864432
Q ss_pred cccCCceeEEEeeCCCCCCC
Q psy10606 81 TGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 81 ~~~~~~~~~~C~C~~D~CN~ 100 (128)
... .....| |++|+||.
T Consensus 47 ~~~--~~~v~C-C~TD~CN~ 63 (63)
T 1f94_A 47 DTW--NVYNKC-CTTNLCNT 63 (63)
T ss_dssp ESS--SEEEEE-ECSTTCCC
T ss_pred CCC--CceeEe-cCCCCCCC
Confidence 110 245778 99999994
>3vts_A Cytotoxin 1; three finger toxin, venom toxin; 2.43A {Hemachatus haemachatus}
Back Show alignment and structure
Probab=97.56 E-value=0.00015 Score=43.20 Aligned_cols=43 Identities=28% Similarity=0.550 Sum_probs=29.9
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|.........+|.|||+...... . .+.+ ..| |++|.||
T Consensus 19 qnlCykk~~~~~~g~~i~rGCaatCP~~------~--~~~~-v~C-C~tDkCN 61 (61)
T 3vts_A 19 KNLCYKMTLMKMPKIPIKRGCTDACPKS------S--LLVK-VVC-CNKDKCN 61 (61)
T ss_dssp CCEEEEEEETTEEEEEEEEEEESSCCCC------C--SSEE-EEE-ECSTTCC
T ss_pred CceEEeEEEecCCCCeEEeceeCcCcCC------C--CCcE-EEE-eCCccCC
Confidence 6789987654333578999999975532 1 2233 568 9999999
>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*
Back Show alignment and structure
Probab=97.36 E-value=0.00043 Score=52.70 Aligned_cols=80 Identities=21% Similarity=0.453 Sum_probs=45.2
Q ss_pred CcceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEE---E--eCCc---eEEEEceecCcc
Q psy10606 1 VSIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQ---K--IYSK---RRVVRGCGYINE 72 (128)
Q Consensus 1 ~aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~---~--~~g~---~~v~R~C~~~~~ 72 (128)
.+|.||+|.+....-|.. ....+.|+.. ..+|..++. . ++|. +.+.|+|+....
T Consensus 92 ~sLsC~sC~~~~~scc~g-----~~~s~tCp~~-------------~d~Cvt~~~~~s~a~~~g~~~~~~~~KgC~~ss~ 153 (276)
T 2fd6_U 92 RYLECISCGSSDMSCERG-----RHQSLQCRSP-------------EEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPG 153 (276)
T ss_dssp -CCEEEEEETTTTTTTTT-----CCEEEECSST-------------TCEEEEEEEEC----------CCSEEEEEEECTT
T ss_pred CCcCCccCCCCCCccccC-----CCcccCCCCC-------------CCEEEEEEEeeeeecccCccceeeEecCCCCcCC
Confidence 369999999886433332 1136899851 568988866 2 2342 246899964322
Q ss_pred cCcccc--cccc-cCCceeEEEeeCCCCCCCCCC
Q psy10606 73 ERDDCY--RRTG-TFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 73 ~~~~C~--~~~~-~~~~~~~~C~C~~D~CN~a~~ 103 (128)
|. .... ........| |++|+||.+..
T Consensus 154 ----C~gsv~~~~~~~~~~~~C-C~tD~CN~~p~ 182 (276)
T 2fd6_U 154 ----CPGSNGFHNNDTFHFLKC-CNTTKCNEGPI 182 (276)
T ss_dssp ----CSEEEEEEETTEEEEEEE-ECSTTTTCSSC
T ss_pred ----CCCeEEeCCceEEEeeEc-cCCCccCCCCC
Confidence 30 0111 111235688 99999996654
>1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ...
Back Show alignment and structure
Probab=97.32 E-value=0.00044 Score=40.89 Aligned_cols=43 Identities=28% Similarity=0.519 Sum_probs=29.7
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|.........+|.|||+...... . . .....| |.+|+||
T Consensus 18 ~~~Cyk~~~~~~~g~~i~rGCa~tCP~~------~-~--~~~v~C-C~TD~CN 60 (60)
T 1ug4_A 18 KNLCYKMFMVAAPKVPVKRGCIDVCPKS------S-L--LVKYVC-CNTDRCN 60 (60)
T ss_dssp CCEEEEEEETTEEEEEEEEEEESSCCCC------C-S--SEEEEE-ECSTTCC
T ss_pred cCeEeeeEEecCCCCEEECCccCcCcCC------C-C--CceeEe-cCCCCCC
Confidence 7889888543222467999999975532 1 1 145778 9999999
>1tfs_A Toxin FS2; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Back Show alignment and structure
Probab=97.21 E-value=0.00079 Score=39.82 Aligned_cols=42 Identities=33% Similarity=0.568 Sum_probs=26.6
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|......-..+|.||| . |.... . .....| |.+|.||.
T Consensus 19 ~~~Cyk~~~~~~~g~~i~rGC--t------CP~~~-~--~~~v~C-CsTD~CN~ 60 (60)
T 1tfs_A 19 ENTCYKMFIRTHREYISERGC--G------CPTAM-W--PYQTEC-CKGDRCNK 60 (60)
T ss_dssp CSEEEEEEETTEEEEEEEEEE--S------SCCCC-T--TEEEEE-EESTTCCC
T ss_pred CcEeeeeEEcCCCCCEEeeec--c------CCCCC-C--CceEEe-cCCCCCCC
Confidence 677988743211137899999 3 32111 1 245778 99999994
>1fas_A Fasciculin 1; toxin; 1.80A {Dendroaspis angusticeps} SCOP: g.7.1.1 PDB: 1fsc_A 1f8u_B* 1b41_B 1fss_B* 1ku6_B* 1mah_F* 2x8b_B* 1qm7_A
Back Show alignment and structure
Probab=97.12 E-value=0.0026 Score=37.72 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=27.1
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCC-CCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKG-DICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~-D~CN~ 100 (128)
...|.|......-..+|.||| . |.... . .....| |.+ |.||.
T Consensus 19 ~~~Cyk~~~~~~~g~~i~RGC--t------CP~~~-~--~~~v~C-CsT~D~CN~ 61 (61)
T 1fas_A 19 ENSCYRKSRRHPPKMVLGRGC--G------CPPGD-D--YLEVKC-CTSPDKCNY 61 (61)
T ss_dssp TSCEEEEEESSSSCCEEEEEE--S------CCCCC-S--SEEEEE-ECSSTTTTC
T ss_pred CcCCeeeEEcCCCCCEEeeeC--C------CCCCC-C--CcEEEe-eCCcCCCCc
Confidence 677988754332247899999 2 32211 1 245778 999 99994
>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3
Back Show alignment and structure
Probab=97.00 E-value=0.0013 Score=50.89 Aligned_cols=82 Identities=21% Similarity=0.444 Sum_probs=46.2
Q ss_pred CcceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE--e---CC-c--eEEEEceecCcc
Q psy10606 1 VSIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK--I---YS-K--RRVVRGCGYINE 72 (128)
Q Consensus 1 ~aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~--~---~g-~--~~v~R~C~~~~~ 72 (128)
.+|.||+|.+..+ .|... ....+.|+.. ..+|..++.. . +| . ..+.|+|.....
T Consensus 91 ~sLsCysC~~~~~-sC~~g----~~~s~tCp~~-------------~d~Cvt~~~~~s~~~~~g~~~~~~~~KgC~~s~~ 152 (313)
T 1ywh_A 91 RYLECISCGSSDM-SCERG----RHQSLQCRSP-------------EEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPG 152 (313)
T ss_dssp CCSEEECBCSSSS-CHHHH----TTCEEECSST-------------TCEEEEEEEEECC-----CCSCCEEEEEEEECTT
T ss_pred cccCCccCCCCCC-CcccC----CCcccCCCCC-------------CCEEEEEEEeeeeeccCCccccceEecCCCCcCC
Confidence 4799999998853 45220 0126889851 5689888652 2 33 2 267899955322
Q ss_pred -cCcccccccccCCceeEEEeeCCCCCCCCCC
Q psy10606 73 -ERDDCYRRTGTFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 73 -~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~ 103 (128)
+.. .............| |++|+||.+..
T Consensus 153 C~gs--v~~~~~~~~~~~~C-C~TD~CN~~p~ 181 (313)
T 1ywh_A 153 CPGS--NGFHNNDTFHFLKC-CNTTKCNEGPI 181 (313)
T ss_dssp CSEE--EEEECSSEEEEEEE-ECSTTTTCSSC
T ss_pred CCCe--EEeCCceEEEeeee-eCCCCcCCCCC
Confidence 110 00111112345688 99999996544
>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*
Back Show alignment and structure
Probab=96.72 E-value=0.004 Score=47.32 Aligned_cols=78 Identities=19% Similarity=0.374 Sum_probs=51.4
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYR 79 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~ 79 (128)
.++||.|-+....+|..+ ..+.++|.. .+..|+.+...++ +...++|||+.... |..
T Consensus 192 G~~CpaC~~~~s~~Cs~~----~t~~v~CtG-------------~En~Cv~~~g~~g~~~~s~~vkGCaT~s~----C~~ 250 (276)
T 2fd6_U 192 GRQCYSCKGNSTHGCSSE----ETFLIDCRG-------------PMNQCLVATGTHEPKNQSYMVRGCATASM----CQH 250 (276)
T ss_dssp EEEEEEEEEBTTTBSSTT----TCEEEEEET-------------TCCEEEEEEEEETTTTEEEEEEEEECGGG----CC-
T ss_pred CCCCcccccCCCCCCCCC----Ccccceeec-------------CcccceeeeeeeccCCceEEEecCCCchh----hcC
Confidence 478999998877778643 112367885 2788999988764 24567899997432 332
Q ss_pred c---cccCC-ceeEEEeeCCCCCCCC
Q psy10606 80 R---TGTFD-VDSTYCACKGDICNGS 101 (128)
Q Consensus 80 ~---~~~~~-~~~~~C~C~~D~CN~a 101 (128)
. ..... ....+| |++.+||+|
T Consensus 251 ~~~~~~~~~~~~~~sC-c~G~~CN~~ 275 (276)
T 2fd6_U 251 AHLGDAFSMNHIDVSC-CTKSGCNHP 275 (276)
T ss_dssp --CGGGGTCSSCEEEE-ECSTTTTSC
T ss_pred CCcccccccccceeEe-CCCCCCCCC
Confidence 1 00111 445788 999999987
>4fao_C Serine/threonine-protein kinase receptor R3; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens} PDB: 2lcr_A
Back Show alignment and structure
Probab=96.66 E-value=0.0047 Score=40.55 Aligned_cols=55 Identities=27% Similarity=0.618 Sum_probs=38.0
Q ss_pred CCceEEEEEEeCCc-eEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCCCCc
Q psy10606 47 PVICRKIIQKIYSK-RRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPSLGQ 106 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~-~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~~~ 106 (128)
..+|.+.+...+|. ..+.|||....+. .|..... ..+.+.| |++|+||....+..
T Consensus 29 ~g~Cf~sv~~~~g~~~~~~~GCl~~~~~--~C~~s~~--~~~~i~C-C~tDfCN~~l~p~L 84 (106)
T 4fao_C 29 GAWCTVVLVREEGRHPQEHRGCGNLHRE--LCRGRPT--EFVNHYC-CDSHLCNHNVSLVL 84 (106)
T ss_dssp ESSEEEEEECCTTSCCEEEEECCCSCGG--GGGCCCC--SSEEEEE-ECSTTTTSSCCCCC
T ss_pred CCEeEEEEEEcCCceEEEEeCCCCCCcc--ccCCCCC--CceEEEe-cCccccCCCCCcCc
Confidence 57799987766664 4578999886432 5754332 2567899 99999997654443
>1drs_A Dendroaspin; cell adhesion protein; NMR {Dendroaspis jamesoni kaimosae} SCOP: g.7.1.2 PDB: 2la1_A
Back Show alignment and structure
Probab=96.11 E-value=0.0033 Score=37.06 Aligned_cols=41 Identities=32% Similarity=0.557 Sum_probs=25.3
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|... .. ..+|.||| .... .. .+.....| |.+|.||.
T Consensus 19 ~~~Cyk~~~-~~-g~~i~RGC--tCP~------~~--~~~~~i~C-CsTD~CN~ 59 (59)
T 1drs_A 19 EDSCYKNIW-TF-DNIIRRGC--GCFT------PR--GDMPGPYC-CESDKCNL 59 (59)
T ss_dssp CSCEEECCC-TT-TTCCCCEE--CCCS------CC--SSCSSCEE-ESSSSSCC
T ss_pred CcEeEeEEe-cC-CCEEeeec--cCCC------CC--CCcccCEE-cCCccCCC
Confidence 677987643 22 36788999 3222 11 12222678 99999994
>2h62_D ACVR2B protein; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 1nys_A 1nyu_A 2h64_C 1s4y_A
Back Show alignment and structure
Probab=94.68 E-value=0.097 Score=33.76 Aligned_cols=53 Identities=19% Similarity=0.504 Sum_probs=36.9
Q ss_pred CCceEEEEEEeCCceEE-EEceecCccc---CcccccccccCCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRV-VRGCGYINEE---RDDCYRRTGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v-~R~C~~~~~~---~~~C~~~~~~~~~~~~~C~C~~D~CN~a 101 (128)
...|..+.....|...| .+||-....+ ...|.... ......+|.|.+|+||.-
T Consensus 38 ~~~C~~lW~~~~g~~~v~~qGCw~d~~~C~d~~eCv~t~--~~~~~~fCCC~gd~CN~n 94 (98)
T 2h62_D 38 RLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATE--ENPQVYFCCCEGNFCNER 94 (98)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECCGGGTTCSSEECCC--SSCSSEEEEESSTTTTSS
T ss_pred CCceEEEEEeCCCcEEEEEEcccCCCCCCCCcceeeccC--CCCCEEEEECCCCccccc
Confidence 77899998877777655 5899984331 12454332 345678998999999974
>1bte_A Protein (activin receptor type II); serine kinase, ligand binding domain, three-finger transferase; HET: NAG; 1.50A {Mus musculus} SCOP: g.7.1.3 PDB: 2goo_C* 1lx5_B*
Back Show alignment and structure
Probab=94.43 E-value=0.11 Score=33.51 Aligned_cols=54 Identities=24% Similarity=0.535 Sum_probs=37.5
Q ss_pred CCceEEEEEEeCCceE-EEEceecCccc---CcccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRR-VVRGCGYINEE---RDDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~-v~R~C~~~~~~---~~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
...|..+.....|... +.+||.....+ ...|.... ......+|.|.+|+||.--
T Consensus 33 ~~~C~~lW~~~~g~~~i~~qGCw~d~~~C~d~~eCv~t~--~~~~~~fCCC~gd~CN~nf 90 (97)
T 1bte_A 33 RRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCIEKK--DSPEVYFCCCEGNMCNEKF 90 (97)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECSCCCCSCSSSEEECS--SSCSSEEEEECSTTGGGSE
T ss_pred CCceEEEEeeCCCCEEEEEecccCCCCCCCCcceeecCC--CCCCEEEEECCCCccccCc
Confidence 7889999887777664 56899984331 12455433 2346789989999999754
>4fao_E Activin receptor type-2B; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens}
Back Show alignment and structure
Probab=94.18 E-value=0.16 Score=34.12 Aligned_cols=54 Identities=19% Similarity=0.434 Sum_probs=36.8
Q ss_pred CCceEEEEEEeCCce-EEEEceecCccc--C-cccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKR-RVVRGCGYINEE--R-DDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~-~v~R~C~~~~~~--~-~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
...|..+.....|.. .+..||.....+ . ..|.... ......+|.|.+|+||.-.
T Consensus 40 ~~~Cf~lW~~~~g~~~i~~qGCw~d~~~C~~~~eCv~t~--~~~~~~fCCC~gdlCN~nf 97 (124)
T 4fao_E 40 RLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATE--ENPQVYFCCCEGNFCNERF 97 (124)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECCGGGTTCCSEEECC--SSCSEEEEEECSTTTTSSE
T ss_pred CCceEEEEecCCCCEEEEEecccCCCCCCCCCCeeeccC--CCCCcEEEecCCCccCCce
Confidence 678998887777765 456899985331 1 2454332 2346899999999999753
>2hlr_A Bone morphogenetic protein receptor type-2; three-finger toxin, BMP receptor, TGF-beta, transferase; 1.20A {Ovis aries} PDB: 2hlq_A
Back Show alignment and structure
Probab=93.84 E-value=0.028 Score=36.44 Aligned_cols=55 Identities=22% Similarity=0.451 Sum_probs=29.4
Q ss_pred CCceEEEEEEeCCc-eEEEEceecCccc-----Cccccccccc---CCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSK-RRVVRGCGYINEE-----RDDCYRRTGT---FDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~-~~v~R~C~~~~~~-----~~~C~~~~~~---~~~~~~~C~C~~D~CN~a 101 (128)
...|..+.....|. ..+.+||.....+ ...|...+.. ....+.+|.|.+|+||.-
T Consensus 32 ~~~Cf~lW~~~~g~~~v~~qGCW~~~~d~~~C~~~eCv~t~~~~~~~n~~~~FCCC~gd~CN~n 95 (100)
T 2hlr_A 32 GSTCYGLWEKSKGDINLVKQGCWSHIGDPQECHYEECVVTTTPPSIQNGTYRFCCCSTDLCNVN 95 (100)
T ss_dssp TCEEEEEC-------CCCEEEEECCCSCTTTSBSSSCBCC----------CCEEEESSTTGGGS
T ss_pred CCcEEEEEeeCCCcEEEEEecCcCcCCCCCCCCCCcccccCCCcccCCCCEEEEECCCCccccc
Confidence 46798886655554 4567999984221 1256543321 234567998999999964
Homologous Structure Domains
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability Query 128
d2h62c1 84
BMP receptor Ia ectodomain {Human (Homo sapiens) [
97.88 d1ff4a_ 65
Muscarinic toxin {Green mamba (Dendroaspis angusti
97.74 d2h8ua1 65
Bucain {Malaysian krait (Bungarus candidus) [TaxId
97.57 d1kxia_ 62
Cardiotoxin V {Taiwan cobra (Naja naja atra) [TaxI
97.54 d1jgka_ 66
Candoxin {Malayan krait (Bungarus candidus) [TaxId
97.34 d1mr6a_ 68
Bungarotoxin {Many-banded krait (Bungarus multicin
97.28 d2j8ba1 77
CD59 {Human (Homo sapiens) [TaxId: 9606]}
97.27 d2fd6u1 80
Urokinase plasminogen activator surface receptor,
97.21 d2fd6u2 87
Urokinase plasminogen activator surface receptor,
97.2 d1tgxa_ 60
gamma-Cardiotoxin {Snake (Naja nigricollis) [TaxId
97.0 d1ntna_ 72
Neurotoxin I {Snake (Naja naja oxiana) [TaxId: 865
96.87 d2h7zb1 77
Irditoxin subunit B {Brown tree snake (Boiga irreg
96.25 d1hc9a_ 74
Bungarotoxin {Many-banded krait (Bungarus multicin
96.11 d1v6pa_ 62
Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra)
95.86 d2h5fa1 75
Denmotoxin {Mangrove snake (Boiga dendrophila) [Ta
95.6 d2h7za1 75
Irditoxin subunit A {Brown tree snake (Boiga irreg
95.58 d3ebxa_ 62
Erabutoxin B (also neurotoxin B) {Sea snake (Latic
95.42 d1btea_ 96
Type II activin receptor {Mouse (Mus musculus) [Ta
95.01 d2h62d1 91
Type II activin receptor {Mouse (Mus musculus), is
94.95 d1kbaa_ 66
Bungarotoxin {Many-banded krait (Bungarus multicin
94.73 d1lsia_ 66
Long neurotoxin 1 (component LSIII) {Sea snake (La
94.44 d2fd6u3 97
Urokinase plasminogen activator surface receptor,
93.68 d1ntxa_ 60
alpha-Toxin {Black mamba (Dendroaspis polylepis po
92.79 d1tfsa_ 60
FS2 toxin {Black mamba (Dendroaspis polylepis poly
91.31 d2ctxa_ 71
alpha-Cobratoxin {Cobra (Naja siamensis) [TaxId: 8
90.27 d1fasa_ 61
Fasciculin {Green mamba (Dendroaspis angusticeps)
89.01 d1f94a_ 63
Bucandin {Malayan krait (Bungarus candidus) [TaxId
88.48 d1drsa_ 59
Dendroaspin {Dendroaspis jamesoni kaimosae [TaxId:
86.77
>d2h62c1 g.7.1.3 (C:34-117) BMP receptor Ia ectodomain {Human (Homo sapiens) [TaxId: 9606]}
Back Hide information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: BMP receptor Ia ectodomain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=7.1e-06 Score=50.44 Aligned_cols=56 Identities=18% Similarity=0.333 Sum_probs=37.8
Q ss_pred CCceEEEEEEe-CCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCC
Q psy10606 47 PVICRKIIQKI-YSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 47 ~~~C~Ki~~~~-~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~ 103 (128)
...|.+.++.. +|+..+.+||.........|+............| |++|+||.-..
T Consensus 23 ~g~Cf~s~~~~~~g~~~~~~GCl~~~~~~~~C~~~~~~~~~~~~~C-C~~D~CN~~l~ 79 (84)
T d2h62c1 23 NGHCFAIIEEDDQGETTLASGCMKYEGSDFQCKDSPKAQLRRTIEC-CRTNLCNQYLQ 79 (84)
T ss_dssp SSEEEEEEEECSSSCEEEEEEEECSTTHHHHHHCCTTCSSCEEEEE-ECSTTGGGGCC
T ss_pred CCEEeEEEEEcCCCcEEEEEcCCCCCCCceEeCCCCCCCCceEEEe-CCCCccCcCCc
Confidence 67799998875 5677888999864221126765443333445566 99999997543
>d1ff4a_ g.7.1.1 (A:) Muscarinic toxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Muscarinic toxin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]
Probab=97.74 E-value=7e-05 Score=43.68 Aligned_cols=64 Identities=22% Similarity=0.450 Sum_probs=43.0
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-CceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|.|+.|.|. .|.. ..+|+.- ...|.|...... ...+|.|||+...... .
T Consensus 1 ltC~~~~s~---~~~t--------~~tCp~G-------------qnlCykk~~~~~~~g~~i~rGCaaTCP~~------~ 50 (65)
T d1ff4a_ 1 LTCVTTKSI---GGVT--------TEDCPAG-------------QNVCFKRWHYVTPKNYDIIKGCAATCPKV------D 50 (65)
T ss_dssp CEEEEECTT---SSEE--------EEECCTT-------------CCEEEEEEEESSSSCEEEEEEEESSCCCC------C
T ss_pred CeeecCCCc---cCCc--------cccCCCc-------------cceeeEEEEecCCCCCEEEeeeeCcCCCC------C
Confidence 567877776 3322 4677741 678998875543 4578999999975532 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
. .....| |++|.||.
T Consensus 51 -~--~~~v~C-CsTDkCNk 65 (65)
T d1ff4a_ 51 -N--NDPIRC-CGTDKCND 65 (65)
T ss_dssp -S--CCCEEE-ECSTTTTC
T ss_pred -C--CCEEEE-eCCccCCC
Confidence 1 234778 99999994
>d2h8ua1 g.7.1.1 (A:1-65) Bucain {Malaysian krait (Bungarus candidus) [TaxId: 92438]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bucain
species: Malaysian krait (Bungarus candidus) [TaxId: 92438]
Probab=97.57 E-value=6.4e-05 Score=43.81 Aligned_cols=44 Identities=27% Similarity=0.460 Sum_probs=31.9
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|+..... ...+|.|||+...... . ......| |++|.||+
T Consensus 21 qnlCyK~~~~~~~~g~~v~rGCaaTCP~~------~---~~~~v~C-CsTD~CN~ 65 (65)
T d2h8ua1 21 QLLCLKKWEIGNPSGKEVKRGCVATCPKP------W---KNEIIQC-CAKDKCNA 65 (65)
T ss_dssp CCEEEEEEESSCTTCCCCEEEEESSCCCC------C---TTEEEEE-ECSTTCCC
T ss_pred cceeEEEEecCCCCCceEeeeeeCcCCCC------C---CCCEEEE-eCCcccCC
Confidence 677999876533 4678999999975532 1 1235788 99999996
>d1kxia_ g.7.1.1 (A:) Cardiotoxin V {Taiwan cobra (Naja naja atra) [TaxId: 8656]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Cardiotoxin V
species: Taiwan cobra (Naja naja atra) [TaxId: 8656]
Probab=97.54 E-value=0.0001 Score=42.49 Aligned_cols=43 Identities=30% Similarity=0.515 Sum_probs=31.6
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|+..... ....|+|||+...... . ......| |++|.||
T Consensus 19 qnlCyK~~~~~~~~~~~v~RGCaatCP~~------~---~~~~v~C-CsTDkCN 62 (62)
T d1kxia_ 19 KNLCFKATLKKFPLKFPVKRGCADNCPKN------S---ALLKYVC-CSTDKCN 62 (62)
T ss_dssp CCEEEEEEESSSCCCSCSEEEEESSCCCC------C---SSEEEEE-ECSTTCC
T ss_pred cceEEEEeeccCcCCceeeeeeeccCcCC------C---CCCEEEE-cCCCCCC
Confidence 678999977643 4678999999975532 1 2234678 9999999
>d1jgka_ g.7.1.1 (A:) Candoxin {Malayan krait (Bungarus candidus) [TaxId: 92438]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Candoxin
species: Malayan krait (Bungarus candidus) [TaxId: 92438]
Probab=97.34 E-value=0.00058 Score=39.66 Aligned_cols=44 Identities=25% Similarity=0.379 Sum_probs=30.5
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|.........+|.|||+...... . .......| |.+|.||
T Consensus 23 e~~Cykk~w~d~rG~rierGCaATCP~~------k--~~~~~i~C-C~TD~CN 66 (66)
T d1jgka_ 23 EKYCFKESWREARGTRIERGCAATCPKG------S--VYGLYVLC-CTTDDCN 66 (66)
T ss_dssp SCEEEEEEECCSSCCEEECCEESCCCCC------S--SSCCEEEE-ECSTTCC
T ss_pred CCeEeeeEeecCCCCEEEccEeccCCCC------c--CCCCEEEE-eCCccCC
Confidence 6789877654433568999999975532 1 12234778 9999999
>d1mr6a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin [TaxId: 8616]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bungarotoxin
species: Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin [TaxId: 8616]
Probab=97.28 E-value=9e-05 Score=43.57 Aligned_cols=64 Identities=25% Similarity=0.506 Sum_probs=41.5
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe-CC---ceEEEEceecCcccCcccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI-YS---KRRVVRGCGYINEERDDCY 78 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~-~g---~~~v~R~C~~~~~~~~~C~ 78 (128)
|+|+.|.+. .|.. ...|+.- ...|.|..-.. -+ ..+|.|||+......
T Consensus 1 l~C~tC~~~---~c~~--------~etCp~G-------------qnlCykk~w~~~~~~~~g~~i~rGCaaTCP~~---- 52 (68)
T d1mr6a_ 1 MQCKTCSFY---TCPN--------SETCPDG-------------KNICVKRSWTAVRGDGPKREIRRECAATCPPS---- 52 (68)
T ss_dssp CBCCCCSSS---CCCS--------CCBCCTT-------------CCCEEEECCBCCSSSCCSBCCEEEECSSSSSC----
T ss_pred CceEeCCCc---cCCC--------cccCCCC-------------CCeEEeEEeeccccccCCCcEecceeCcCcCC----
Confidence 578888865 3433 3578751 67898875432 12 457999999975532
Q ss_pred cccccCCceeEEEeeCCCCCCC
Q psy10606 79 RRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 79 ~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
. . + ....| |++|.||.
T Consensus 53 --~-~-~-~~v~C-CsTD~CN~ 68 (68)
T d1mr6a_ 53 --K-L-G-LTVFC-CTTDNCNH 68 (68)
T ss_dssp --C-S-S-SCCCC-BSSSSCCC
T ss_pred --C-C-C-CEEEE-eCCccCCC
Confidence 1 1 1 23678 99999994
>d2j8ba1 g.7.1.3 (A:1-77) CD59 {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: CD59
species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00037 Score=41.65 Aligned_cols=71 Identities=28% Similarity=0.532 Sum_probs=45.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCcccccc--
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERDDCYRR-- 80 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~-- 80 (128)
|+||.|.-. -..|.. .++|+. +...|.+.. .+|+ +.|+|.-... |...
T Consensus 1 L~CY~C~d~-t~~C~t--------~~~C~~-------------~~DaCL~~~--~g~~--~y~qCwk~sD----C~~~~i 50 (77)
T d2j8ba1 1 LQCYNCPNP-TADCKT--------AVNCSS-------------DFDACLITK--AGLQ--VYNKCWKFEH----CNFNDV 50 (77)
T ss_dssp CEEECCSSC-CTTCCC--------EEECCT-------------TCCEEEEEE--ETTE--EEEEEECGGG----CSHHHH
T ss_pred CcccccCCC-CCcccc--------ccccCC-------------CCCeeEEEe--eCCe--EEeeeEeccC----CCHHHH
Confidence 799999955 467875 578885 268899663 4444 7889986533 2210
Q ss_pred --cccCCceeEEEeeCCCCCCCCCCC
Q psy10606 81 --TGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 81 --~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
..........| |+.|+||....+
T Consensus 51 s~~f~~~~f~y~C-C~~dLCN~~~~~ 75 (77)
T d2j8ba1 51 TTRLRENELTYYC-CKKDLCNFNEQL 75 (77)
T ss_dssp HHHHTCSSCEEEE-ECSTTCCCGGGC
T ss_pred HHHhcccCceeec-cCccccCchhhh
Confidence 01111235677 999999987654
>d2fd6u1 g.7.1.3 (U:1-80) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Urokinase plasminogen activator surface receptor, UPAR
species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.21 E-value=0.0007 Score=39.94 Aligned_cols=74 Identities=26% Similarity=0.443 Sum_probs=46.7
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE--eCCc--eEEEEceecCcccC-ccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK--IYSK--RRVVRGCGYINEER-DDC 77 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~--~~g~--~~v~R~C~~~~~~~-~~C 77 (128)
|+|-+|.+.. +|. ..+|..- ..-|++++.. .+|+ ..|.|+|+-..... ..
T Consensus 1 LrCmqCe~~~--~C~---------VeeCalg-------------QdLCRTTv~r~We~g~Elevv~rgCth~eKtNrtM- 55 (80)
T d2fd6u1 1 LRCMQCKTNG--DCR---------VEECALG-------------QDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTL- 55 (80)
T ss_dssp CEEEEECTTS--CEE---------EEECCTT-------------CCEEEEEEEEEECC---EEEEEEEEECTTCCCEEE-
T ss_pred CcceeccCCC--cee---------EEeccCc-------------cchhhHhhhhhhcCCceEEEEEcccccccccccee-
Confidence 7999999874 674 3577741 5679998776 3443 46789999875532 11
Q ss_pred ccccccCCceeEEEeeCCCCCCCC
Q psy10606 78 YRRTGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 78 ~~~~~~~~~~~~~C~C~~D~CN~a 101 (128)
..+.+...+....=.|.+|+||..
T Consensus 56 SyR~g~~IitLtEtVC~~dlCN~p 79 (80)
T d2fd6u1 56 SYRTGLKITSLTEVVCGLDLCNQG 79 (80)
T ss_dssp EEEETTEEEEEEEEEECSTTTTSC
T ss_pred eeeeccEEEEeeeehhccccccCC
Confidence 113333333333347999999963
>d2fd6u2 g.7.1.3 (U:189-275) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Urokinase plasminogen activator surface receptor, UPAR
species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00066 Score=41.24 Aligned_cols=78 Identities=19% Similarity=0.359 Sum_probs=48.1
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYR 79 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~ 79 (128)
.|+||.|....+-.|...++ +.+.|-. + ..-|.......+ ++..++|||+.... |.-
T Consensus 3 ~leC~SC~gss~~~Cs~~~~----~~l~Cr~----------p---~~QClea~g~~~~~~~s~~vRGCat~~~----C~g 61 (87)
T d2fd6u2 3 GRQCYSCKGNSTHGCSSEET----FLIDCRG----------P---MNQCLVATGTHEPKNQSYMVRGCATASM----CQH 61 (87)
T ss_dssp EEEEEEEEEBTTTBSSTTTC----EEEEEET----------T---CCEEEEEEEEETTTTEEEEEEEEECGGG----CC-
T ss_pred CceeeecCCCCCcccccccc----eeeecCC----------c---hhhheeccCcccCCCccceecccccCcC----CCC
Confidence 48999997555678875432 3567764 1 456876544433 46788999998643 221
Q ss_pred ccc---cC-CceeEEEeeCCCCCCCC
Q psy10606 80 RTG---TF-DVDSTYCACKGDICNGS 101 (128)
Q Consensus 80 ~~~---~~-~~~~~~C~C~~D~CN~a 101 (128)
..+ +. ......| |++..||+-
T Consensus 62 ~~~~~~f~t~H~~lsC-Cn~s~CN~p 86 (87)
T d2fd6u2 62 AHLGDAFSMNHIDVSC-CTKSGCNHP 86 (87)
T ss_dssp --CGGGGTCSSCEEEE-ECSTTTTSC
T ss_pred CcccccccccceeeEe-cCCCCCCCC
Confidence 111 11 1234778 999999973
>d1tgxa_ g.7.1.1 (A:) gamma-Cardiotoxin {Snake (Naja nigricollis) [TaxId: 8654]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: gamma-Cardiotoxin
species: Snake (Naja nigricollis) [TaxId: 8654]
Probab=97.00 E-value=0.00045 Score=39.49 Aligned_cols=43 Identities=26% Similarity=0.542 Sum_probs=30.4
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|......-..+|.|||+...... . .+. ...| |++|.||
T Consensus 18 qnlCykk~~~~~~g~~v~rGCaatCP~~------~--~~~-~v~C-CsTDkCN 60 (60)
T d1tgxa_ 18 KNLCYKMTMRAAPMVPVKRGCIDVCPKS------S--LLI-KYMC-CNTDKCN 60 (60)
T ss_dssp CCEEEEEEETTBTTCCSEEEEESSCCCC------C--SSE-EEEE-ECSTTCC
T ss_pred cceeeeEEeeccCCCEEecceeccCCCC------C--CCC-EEEE-eCCCcCC
Confidence 7789988765433467999999975532 1 122 3568 9999999
>d1ntna_ g.7.1.1 (A:) Neurotoxin I {Snake (Naja naja oxiana) [TaxId: 8657]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Neurotoxin I
species: Snake (Naja naja oxiana) [TaxId: 8657]
Probab=96.87 E-value=0.00076 Score=39.81 Aligned_cols=47 Identities=19% Similarity=0.393 Sum_probs=30.6
Q ss_pred CCceEEEEEEe-C---CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCC
Q psy10606 47 PVICRKIIQKI-Y---SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 47 ~~~C~Ki~~~~-~---g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~ 103 (128)
...|.|..-.. - -..+|.|||+...... . ......| |.+|.||.-..
T Consensus 18 qnlCy~K~W~d~~~~~rG~~i~rGCaATCP~~------~---~~~~i~C-CsTD~CN~~p~ 68 (72)
T d1ntna_ 18 QNLCYTKTWCDAWCGSRGKVIELGCAATCPTV------E---SYQDIKC-CSTDNCNPHPK 68 (72)
T ss_dssp CCEEEEEEECCTTHHHHCCEEEEEEESSCCCC------C---TTEEEEE-ECSTTCCCCTT
T ss_pred CceEEEEEeeccccCcCCCeEEcceECcCCCC------C---CCCEEEE-ECCCCCCCCCC
Confidence 67797544322 1 1368999999975532 1 1245678 99999997554
>d2h7zb1 g.7.1.1 (B:1-77) Irditoxin subunit B {Brown tree snake (Boiga irregularis) [TaxId: 92519]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Irditoxin subunit B
species: Brown tree snake (Boiga irregularis) [TaxId: 92519]
Probab=96.25 E-value=0.017 Score=33.96 Aligned_cols=67 Identities=21% Similarity=0.491 Sum_probs=47.1
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCcccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYRR 80 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~~ 80 (128)
-+|++||-.+.++|..+ .-|+.. ...|-+.....+ +..++++||+-.....
T Consensus 8 ~~C~qCnr~~~~~C~~~--------~~c~~~-------------~~~CYTlyk~d~n~~~~w~vKGCaktCPTA------ 60 (77)
T d2h7zb1 8 TLCFECNRETCSNCFKD--------NRCPPY-------------HRTCYTLYRPDGNGEMKWAVKGCAKTCPTA------ 60 (77)
T ss_dssp CEECCEETTTCCSCSSC--------EECCTT-------------CCEEEEEEEECSSSCEEEEEEEEESSCCCC------
T ss_pred chhhhccCcccCCCCcc--------ccCCCc-------------CceeeEEEEECCCCceeEEeechhhcCCCC------
Confidence 37999998887888753 456531 677887766543 4678999999875542
Q ss_pred cccCCceeEEEeeCCCCCCC
Q psy10606 81 TGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 81 ~~~~~~~~~~C~C~~D~CN~ 100 (128)
+. ...+-| |.+-.||.
T Consensus 61 -gp--gErVkC-C~sp~CN~ 76 (77)
T d2h7zb1 61 -QP--GESVQC-CNTPKCND 76 (77)
T ss_dssp -CT--TCEEEE-ECSTTTTC
T ss_pred -CC--CCEEEe-eCCCccCC
Confidence 22 235678 99999995
>d1hc9a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin [TaxId: 8616]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bungarotoxin
species: Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin [TaxId: 8616]
Probab=96.11 E-value=0.012 Score=34.63 Aligned_cols=48 Identities=21% Similarity=0.425 Sum_probs=32.2
Q ss_pred CCceEEEEEEeC----CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 47 PVICRKIIQKIY----SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 47 ~~~C~Ki~~~~~----g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
...|.|..-... -..+|.|||+...... . ......| |++|.||.-...
T Consensus 20 qnlCykk~w~d~~~~~rG~~i~rGCaATCP~~------k---~~~~v~C-CsTDkCN~~p~~ 71 (74)
T d1hc9a_ 20 ENLCYRKMWCDVFCSSRGKVVELGCAATCPSK------K---PYEEVTC-CSTDKCNPHPKQ 71 (74)
T ss_dssp CCEEEEEEECCTTHHHHCCEEEEEEESSCCCC------C---TTCEEEE-ECSTTCSCCTTS
T ss_pred cCeEEEEEeeccccCCCCCEEEcceeCcCCCC------C---CCCEEEE-eCCCCCCCCCCC
Confidence 678987754321 2468999999975532 1 1235678 999999976544
>d1v6pa_ g.7.1.1 (A:) Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra) [TaxId: 8656]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Cobrotoxin II (ct2)
species: Taiwan cobra (Naja naja atra) [TaxId: 8656]
Probab=95.86 E-value=0.024 Score=32.13 Aligned_cols=42 Identities=29% Similarity=0.464 Sum_probs=27.8
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
+..|.|..-...-..+|.|||+ .... .+ .....| |.+|.||.
T Consensus 21 en~CYkk~w~d~rg~~ierGCg--CP~v-----kp----gi~i~C-C~tDkCNn 62 (62)
T d1v6pa_ 21 ETNCYKKRWRDHRGYRTERGCG--CPSV-----KN----GIEINC-CTTDRCNN 62 (62)
T ss_dssp CCCEEEEEEEETTEEEEEEEES--CCCC-----CT----TCEEEE-ESSTTCCC
T ss_pred cCeeEeeEeecCCCCEeeeeec--CCCC-----CC----CCEeEE-eCCccCCC
Confidence 7789766555444568999997 2221 12 234678 99999994
>d2h5fa1 g.7.1.1 (A:3-77) Denmotoxin {Mangrove snake (Boiga dendrophila) [TaxId: 46286]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Denmotoxin
species: Mangrove snake (Boiga dendrophila) [TaxId: 46286]
Probab=95.60 E-value=0.019 Score=33.52 Aligned_cols=67 Identities=22% Similarity=0.498 Sum_probs=46.2
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe-C-CceEEEEceecCcccCcccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI-Y-SKRRVVRGCGYINEERDDCYRR 80 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~-~-g~~~v~R~C~~~~~~~~~C~~~ 80 (128)
-.|+|||-...++|..+ ..|... ...|-+..... + |+.++++||+-.....
T Consensus 6 ~~CfqCn~~~~~~C~~~--------~~C~~~-------------~~tCYTlYkpd~n~~~~w~vKGCak~CPtA------ 58 (75)
T d2h5fa1 6 GFCIQCNRKTWSNCSIG--------HRCLPY-------------HMTCYTLYKPDENGEMKWAVKGCARMCPTA------ 58 (75)
T ss_dssp EEEECEESSSSSCTTSE--------EEEEET-------------CCEEEEEEECCSSSCCEEEEEEEESSCCCC------
T ss_pred ceehcccccccCCCCCc--------ccccCC-------------cceeEEEEeecCCCceeeeeehhhhcCCCC------
Confidence 37999997777888653 455531 56787776653 2 5789999999875542
Q ss_pred cccCCceeEEEeeCCCCCCC
Q psy10606 81 TGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 81 ~~~~~~~~~~C~C~~D~CN~ 100 (128)
+. ...+-| |.+-.||.
T Consensus 59 -~p--gE~VkC-C~sp~CN~ 74 (75)
T d2h5fa1 59 -KS--GERVKC-CTGASCNS 74 (75)
T ss_dssp -CT--TCEEEE-ECSTTTTC
T ss_pred -CC--CCEEEe-eCCCccCC
Confidence 12 235678 99999995
>d2h7za1 g.7.1.1 (A:1-75) Irditoxin subunit A {Brown tree snake (Boiga irregularis) [TaxId: 92519]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Irditoxin subunit A
species: Brown tree snake (Boiga irregularis) [TaxId: 92519]
Probab=95.58 E-value=0.041 Score=32.01 Aligned_cols=64 Identities=22% Similarity=0.624 Sum_probs=44.4
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe-C-CceEEEEceecCcccCccccccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI-Y-SKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~-~-g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
.|++||-...++|..+ ..|. ...|-+..... + |+.++++||+-.....
T Consensus 9 ~CfqCn~~~~~~C~~~--------~~C~---------------~~tCYTlYkpd~n~~~~w~vKGCak~CPtA------- 58 (75)
T d2h7za1 9 LCFECNRMTSSDCSTA--------LRCY---------------RGSCYTLYRPDENCELKWAVKGCAETCPTA------- 58 (75)
T ss_dssp EEECEETTTCCCTTCE--------EEEC---------------SSEEEEEEEECTTSCEEEEEEEEESSCCCC-------
T ss_pred hhhhccccccCCCCCC--------cccc---------------cccceeEEeecCCCceeeeeehhhhcCCCC-------
Confidence 7999997777888753 3453 23487776653 3 5778999999875542
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
+. ...+-| |.+-.||.
T Consensus 59 ~p--gE~VkC-C~sp~CN~ 74 (75)
T d2h7za1 59 GP--NERVKC-CRSPRCND 74 (75)
T ss_dssp CT--TCEEEE-ECSTTCCC
T ss_pred CC--CCEEEe-eCCCccCC
Confidence 12 234678 99999995
>d3ebxa_ g.7.1.1 (A:) Erabutoxin B (also neurotoxin B) {Sea snake (Laticauda semifasciata) [TaxId: 8631]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Erabutoxin B (also neurotoxin B)
species: Sea snake (Laticauda semifasciata) [TaxId: 8631]
Probab=95.42 E-value=0.045 Score=30.96 Aligned_cols=42 Identities=21% Similarity=0.498 Sum_probs=27.8
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
+..|-|..-...-..++.|||+ .... .+ .....| |.+|.||.
T Consensus 21 e~~CYkk~w~d~rg~~ierGCg--CP~v-----kp----gi~i~C-C~tDkCNn 62 (62)
T d3ebxa_ 21 ESSCYHKQWSDFRGTIIERGCG--CPTV-----KP----GIKLSC-CESEVCNN 62 (62)
T ss_dssp CCCEEEEEEEETTEEEEEEEES--CCCC-----CT----TCEEEE-ECSTTCCC
T ss_pred CCeeeeeEeccCCCCEEeeeec--CCCC-----CC----CcEeEE-eCCcccCC
Confidence 7789766554444578999997 2221 12 234678 99999994
>d1btea_ g.7.1.3 (A:) Type II activin receptor {Mouse (Mus musculus) [TaxId: 10090]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Type II activin receptor
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.01 E-value=0.036 Score=34.11 Aligned_cols=54 Identities=22% Similarity=0.509 Sum_probs=36.5
Q ss_pred CCceEEEEEEeCCce-EEEEceecCcccC---cccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKR-RVVRGCGYINEER---DDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~-~v~R~C~~~~~~~---~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
...|..+.....|.. .+.+||.....+- ..|...... ....+|.|.+|+||.--
T Consensus 32 ~~~Cf~lW~~~~g~~~i~~qGCw~d~~~cc~~~~Cv~~~~~--~~~~FCCC~gd~CN~nf 89 (96)
T d1btea_ 32 RRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCIEKKDS--PEVYFCCCEGNMCNEKF 89 (96)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECSCCCCSCSSSEEECSSS--CSSEEEEECSTTGGGSE
T ss_pred cCceEEecccCCCCEEEEEecCcCCCCCcccccccccCCCC--CceEEEeCCCCcccccc
Confidence 678988887666665 4568998654431 256543322 34689989999999643
>d2h62d1 g.7.1.3 (D:8-98) Type II activin receptor {Mouse (Mus musculus), isoform IIB [TaxId: 10090]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Type II activin receptor
species: Mouse (Mus musculus), isoform IIB [TaxId: 10090]
Probab=94.95 E-value=0.045 Score=33.34 Aligned_cols=53 Identities=21% Similarity=0.517 Sum_probs=35.7
Q ss_pred CCceEEEEEEeCCce-EEEEceecCccc---CcccccccccCCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKR-RVVRGCGYINEE---RDDCYRRTGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~-~v~R~C~~~~~~---~~~C~~~~~~~~~~~~~C~C~~D~CN~a 101 (128)
...|..+.....|.. .+.+||-....+ ...|..... ...+.+|.|.+|+||.-
T Consensus 31 ~~~Cy~lW~~~~~~i~i~~qGCw~d~~~c~~~~eCv~~~~--~~~~~FCCC~gd~CN~n 87 (91)
T d2h62d1 31 RLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATEE--NPQVYFCCCEGNFCNER 87 (91)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECCGGGTTCSSEECCCS--SCSSEEEEESSTTTTSS
T ss_pred CCccEEEeecCCCCEEEEEecccCCCCCcccccccCccCC--CCceEEEeCCCCccccc
Confidence 678988877666654 456899875442 125654332 23578998999999964
>d1kbaa_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), kappa-bungarotoxin [TaxId: 8616]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bungarotoxin
species: Many-banded krait (Bungarus multicinctus), kappa-bungarotoxin [TaxId: 8616]
Probab=94.73 E-value=0.022 Score=32.61 Aligned_cols=45 Identities=27% Similarity=0.375 Sum_probs=29.2
Q ss_pred CCceEEEEE-Ee-CC--ceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQ-KI-YS--KRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~-~~-~g--~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|-.- .. .+ ..+|.||||...... . .+.....| |.+|.||.
T Consensus 18 qniCy~K~wcd~~c~~rG~~ie~GCaATCP~~------k--~~~~~i~C-CsTDnCNh 66 (66)
T d1kbaa_ 18 QDICFLKAQCDKFCSIRGPVIEQGCVATCPQF------R--SNYRSLLC-CTTDNCNH 66 (66)
T ss_dssp CCEEEEEEECCTTHHHHCCEEEEEEESSCCCC------C--TTEEEEEE-ESSTTCCC
T ss_pred CCEEEEEEeeccccccCCCEEEeeeeeeCCCC------C--CCCCEEEE-eCCccCCC
Confidence 667865433 22 11 358999999975532 1 23456788 99999994
>d1lsia_ g.7.1.1 (A:) Long neurotoxin 1 (component LSIII) {Sea snake (Laticauda semifasciata) [TaxId: 8631]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Long neurotoxin 1 (component LSIII)
species: Sea snake (Laticauda semifasciata) [TaxId: 8631]
Probab=94.44 E-value=0.031 Score=32.09 Aligned_cols=44 Identities=23% Similarity=0.339 Sum_probs=28.9
Q ss_pred CCceEEEEEEe----CCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKI----YSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~----~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|..-.. ....+|.|||+...... . . + ....| |.+|.||-
T Consensus 17 qnlCy~k~w~d~~~~~rG~~i~rGCaATCP~~------k-~-~-~~i~C-CsTD~CN~ 64 (66)
T d1lsia_ 17 QEICYVKSWCNAWCSSRGKVLEFGCAATCPSV------N-T-G-TEIKC-CSADKCNT 64 (66)
T ss_dssp CCEEEEEECCCTTCTTSCCCCEEEEESSCCCC------C-S-S-CEEEE-ESSTTTTS
T ss_pred CCeEEEEEeeccccCcCCCEEEcceECcCCCC------C-C-C-CEEEE-eCCCcCCC
Confidence 67797654321 22468999999975532 1 1 2 34778 99999994
>d2fd6u3 g.7.1.3 (U:92-188) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Urokinase plasminogen activator surface receptor, UPAR
species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.68 E-value=0.15 Score=30.65 Aligned_cols=80 Identities=26% Similarity=0.596 Sum_probs=50.2
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE-----e---CCceEEEEceecCcccC
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK-----I---YSKRRVVRGCGYINEER 74 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~-----~---~g~~~v~R~C~~~~~~~ 74 (128)
|.|-.|.|. |-.|.-..+ ....|.+ + ..-|..++.- . .++.+.+|||+....
T Consensus 2 LEC~SC~Ss-D~SCERGr~----qsLQCr~----------p---~eqClevVTh~~q~~~e~~~~de~~~rGCg~lpg-- 61 (97)
T d2fd6u3 2 LECISCGSS-DMSCERGRH----QSLQCRS----------P---EEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPG-- 61 (97)
T ss_dssp CEEEEEETT-TTTTTTTCC----EEEECSS----------T---TCEEEEEEEEC----------CCSEEEEEEECTT--
T ss_pred ceeeccccc-ccchhhchh----hccccCC----------c---hhhHhHHhhhhhhccccCCcccccccccCCCCCC--
Confidence 679999988 678875432 2445663 1 5569887742 1 245689999998633
Q ss_pred ccccccccc---CCceeEEEeeCCCCCCCCCCCC
Q psy10606 75 DDCYRRTGT---FDVDSTYCACKGDICNGSPSLG 105 (128)
Q Consensus 75 ~~C~~~~~~---~~~~~~~C~C~~D~CN~a~~~~ 105 (128)
|.-..|. .......| |++..||+++-+.
T Consensus 62 --Cpg~~GFH~n~tFhfl~C-Cn~t~Cn~Gpvl~ 92 (97)
T d2fd6u3 62 --CPGSNGFHNNDTFHFLKC-CNTTKCNEGPILE 92 (97)
T ss_dssp --CSEEEEEEETTEEEEEEE-ECSTTTTCSSCCC
T ss_pred --CCCcccccCCceeeeeee-ccccCcCCCCccc
Confidence 3322222 22345677 9999999987664
>d1ntxa_ g.7.1.1 (A:) alpha-Toxin {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: alpha-Toxin
species: Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]
Probab=92.79 E-value=0.26 Score=27.47 Aligned_cols=41 Identities=29% Similarity=0.510 Sum_probs=27.3
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
+..|-|..-......++.|||+=. .. ..++ ...| |.+|.||
T Consensus 19 E~~CYkk~W~d~rg~~ieRGCgCP--~v--------kpgi-~i~C-C~tDkCN 59 (60)
T d1ntxa_ 19 ENSCYKKYWRDHRGTIIERGCGCP--KV--------KPGV-GIHC-CQSDKCN 59 (60)
T ss_dssp CSCEEEEEEECSSSEEEEEEESCC--CC--------CTTS-EEEE-ESSTTCC
T ss_pred CCCeEeeEEecCCCCEeeeccCCC--CC--------CCCc-cceE-eCCcccC
Confidence 567977655555567889999732 11 1123 4678 9999999
>d1tfsa_ g.7.1.1 (A:) FS2 toxin {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: FS2 toxin
species: Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]
Probab=91.31 E-value=0.11 Score=28.96 Aligned_cols=41 Identities=34% Similarity=0.655 Sum_probs=26.6
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
++.|-|..-......++.|||.=... .. ....+| |.+|.||
T Consensus 19 E~sCYkk~w~dhrg~~ieRGCGCP~v----------kp-gi~~~C-C~tDkCN 59 (60)
T d1tfsa_ 19 ENTCYKMFIRTHREYISERGCGCPTA----------MW-PYQTEC-CKGDRCN 59 (60)
T ss_dssp CSEEEEEEETTEEEEEEEEEESSCCC----------CT-TEEEEE-EESTTCC
T ss_pred CCCeeeeEeccCCCcEeccccCCCCC----------CC-CccceE-eCCCccC
Confidence 56797775544345678899954211 11 234678 9999999
>d2ctxa_ g.7.1.1 (A:) alpha-Cobratoxin {Cobra (Naja siamensis) [TaxId: 84476]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: alpha-Cobratoxin
species: Cobra (Naja siamensis) [TaxId: 84476]
Probab=90.27 E-value=0.19 Score=28.86 Aligned_cols=33 Identities=30% Similarity=0.523 Sum_probs=22.9
Q ss_pred ceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 60 KRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 60 ~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
..+|.+||+...... . .+ ....| |++|.||--.
T Consensus 34 Gk~ve~GCaATCP~~------k--~~-~~i~C-CsTDnCNp~p 66 (71)
T d2ctxa_ 34 GKRVDLGCAATCPTV------K--TG-VDIQC-CSTDNCNPFP 66 (71)
T ss_dssp CCEEEEEEESSCCCC------C--TT-CEEEE-ECSTTCCCCC
T ss_pred CcEEEeeeeeeCCCC------C--CC-ceeEE-ECCCCCCCCc
Confidence 358899999975532 1 12 25678 9999999644
>d1fasa_ g.7.1.1 (A:) Fasciculin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Fasciculin
species: Green mamba (Dendroaspis angusticeps) [TaxId: 8618]
Probab=89.01 E-value=0.51 Score=26.26 Aligned_cols=41 Identities=27% Similarity=0.492 Sum_probs=26.4
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeC-CCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACK-GDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~-~D~CN 99 (128)
+..|-|..-......++.|||.=... ..+++ ..| |. .|.||
T Consensus 19 E~sCYkk~w~dhrg~iieRGCGCP~v----------kp~i~-~~C-C~t~DkCN 60 (61)
T d1fasa_ 19 ENSCYRKSRRHPPKMVLGRGCGCPPG----------DDYLE-VKC-CTSPDKCN 60 (61)
T ss_dssp TSCEEEEEESSSSCCEEEEEESCCCC----------CSSEE-EEE-ECSSTTTT
T ss_pred CCCeeeeEEccCCCcEeccccCCCCC----------CCCce-eee-eCCCCccC
Confidence 56798876665556788999954322 12333 456 55 59999
>d1f94a_ g.7.1.1 (A:) Bucandin {Malayan krait (Bungarus candidus) [TaxId: 92438]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Snake venom toxins
domain: Bucandin
species: Malayan krait (Bungarus candidus) [TaxId: 92438]
Probab=88.48 E-value=0.42 Score=25.94 Aligned_cols=63 Identities=32% Similarity=0.682 Sum_probs=40.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCcccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTG 82 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~ 82 (128)
+.||+|-- +.|.- .+.|+. + +++|.|...++...++ -||+-...+.+ .
T Consensus 1 ~ecyrcgv---sgchl--------~~tcsa----------~---e~fc~k~~n~is~~~w--~gc~~tcte~~------t 48 (63)
T d1f94a_ 1 MECYRCGV---SGCHL--------KITCSA----------E---ETFCYKWLNKISNERW--LGCAKTCTEID------T 48 (63)
T ss_dssp CEEEEEET---TEEEE--------EEECCT----------T---CCEEEEEEETTTCCEE--EEEESCCCCEE------S
T ss_pred Cceeeccc---cceeE--------Eeeech----------h---hHHHHHHHhhhhHHHH--hhHHHhhcchh------H
Confidence 46888873 35632 467774 2 8999999887766554 47776544432 1
Q ss_pred cCCceeEEEeeCCCCCCC
Q psy10606 83 TFDVDSTYCACKGDICNG 100 (128)
Q Consensus 83 ~~~~~~~~C~C~~D~CN~ 100 (128)
. ....-| |.+++||.
T Consensus 49 w--~~y~kc-cttnlcnt 63 (63)
T d1f94a_ 49 W--NVYNKC-CTTNLCNT 63 (63)
T ss_dssp S--SEEEEE-ECSTTCCC
T ss_pred H--HHHHHH-hhccccCC
Confidence 2 134567 99999994
>d1drsa_ g.7.1.2 (A:) Dendroaspin {Dendroaspis jamesoni kaimosae [TaxId: 8619]}
Back Show information, alignment and structure
class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Dendroaspin
domain: Dendroaspin
species: Dendroaspis jamesoni kaimosae [TaxId: 8619]
Probab=86.77 E-value=0.083 Score=29.41 Aligned_cols=40 Identities=35% Similarity=0.765 Sum_probs=25.2
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
+..|-|..-. . ..++.|||.=... ..+++..+| |.+|.||
T Consensus 19 E~sCYkk~w~-r-gt~ieRGCGCP~v----------kp~i~~l~C-C~tDkCN 58 (59)
T d1drsa_ 19 EDSCYKNIWT-F-DNIIRRGCGCFTP----------RGDMPGPYC-CESDKCN 58 (59)
T ss_dssp CSCEEECCCT-T-TTCCCCEECCCSC----------CSSCSSCEE-ESSSSSC
T ss_pred CCCeeeeeec-C-CCEeeeccCCCCC----------CCCCcccee-eCCcccC
Confidence 5668766443 2 3467799954322 123445689 9999999
