Psyllid ID: psy10608
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | 2.2.26 [Sep-21-2011] | |||||||
| Q17M80 | 521 | Probable methylmalonate-s | N/A | N/A | 0.795 | 0.679 | 0.745 | 1e-158 | |
| Q7QC84 | 521 | Probable methylmalonate-s | yes | N/A | 0.795 | 0.679 | 0.740 | 1e-157 | |
| Q7KW39 | 520 | Probable methylmalonate-s | yes | N/A | 0.808 | 0.692 | 0.711 | 1e-152 | |
| Q02253 | 535 | Methylmalonate-semialdehy | yes | N/A | 0.795 | 0.661 | 0.686 | 1e-152 | |
| Q9EQ20 | 535 | Methylmalonate-semialdehy | yes | N/A | 0.795 | 0.661 | 0.689 | 1e-151 | |
| Q29HB2 | 520 | Probable methylmalonate-s | yes | N/A | 0.813 | 0.696 | 0.712 | 1e-150 | |
| Q02252 | 535 | Methylmalonate-semialdehy | yes | N/A | 0.795 | 0.661 | 0.669 | 1e-149 | |
| Q07536 | 537 | Methylmalonate-semialdehy | yes | N/A | 0.795 | 0.659 | 0.666 | 1e-149 | |
| P52713 | 523 | Probable methylmalonate-s | yes | N/A | 0.788 | 0.671 | 0.687 | 1e-144 | |
| Q54I10 | 528 | Probable methylmalonate-s | yes | N/A | 0.788 | 0.664 | 0.613 | 1e-130 |
| >sp|Q17M80|MMSA_AEDAE Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 557 bits (1436), Expect = e-158, Method: Compositional matrix adjust.
Identities = 264/354 (74%), Positives = 316/354 (89%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTK++IDGKFV+SK T+WIDLH+PATN+VVTRVPK T EMESAV S+KKA++TWS+T
Sbjct: 24 VPTTKMFIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVESSKKAFKTWSQT 83
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI+ RQQV+F+LQ++I+ NM +LA+NIT+EQGKTL DAEGDVLRGLQVVE CCSI ++
Sbjct: 84 SILGRQQVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQVVEHCCSITSLQM 143
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ +AKDMD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPSER PG
Sbjct: 144 GETVPNIAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPG 203
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A MML+++L +AGCPPGVVNVIHGAHDAVNFICD+P I+A+SFVGSDQAGKYIYER +N
Sbjct: 204 ATMMLMELLNEAGCPPGVVNVIHGAHDAVNFICDNPTIKAVSFVGSDQAGKYIYERAGRN 263
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQSNMGAKNHGVIM+DAN+ NTLNQL GAAFGAAGQRCMALST +FVGEA +W+P+L
Sbjct: 264 GKRVQSNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEAKQWIPDL 323
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA LKV+AG+VPGTD+GPVISPQ+K+RI L++SGV EGA L+LDGR++KV
Sbjct: 324 VERARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKV 377
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Aedes aegypti (taxid: 7159) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 7 |
| >sp|Q7QC84|MMSA_ANOGA Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/354 (74%), Positives = 312/354 (88%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTK++IDGKFVESK DWIDLH+PATNEVVTRVPK T EM++AV S+KKAY+TW ++
Sbjct: 24 VPTTKMFIDGKFVESKTNDWIDLHDPATNEVVTRVPKCTQDEMQTAVESSKKAYKTWRQS 83
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQV+ +LQ+II+ NM +LA+NIT+EQGKTL DAEGDVLRGLQVVE CCSI ++
Sbjct: 84 SILSRQQVMLKLQHIIRNNMSELAKNITKEQGKTLIDAEGDVLRGLQVVEHCCSITSLQM 143
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ +AKDMD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPSER PG
Sbjct: 144 GETVPNIAKDMDTYSYHLPLGVTAGIAPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPG 203
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L++ML +AGCPPGVVNVIHGAHDAVNF+CD+PDIRA+SFVGSDQAGKYIYER +N
Sbjct: 204 ATMLLMEMLNEAGCPPGVVNVIHGAHDAVNFVCDNPDIRAVSFVGSDQAGKYIYERAGRN 263
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ NMGAKNHGVIM+DAN+ NTLNQL GAAFGAAGQRCMALST +FVGEA W+P+L
Sbjct: 264 GKRVQCNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEARNWIPDL 323
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA LKV+AG++PGTDLGPVISPQ+K+RI L++SG EGA ++LDGRN+KV
Sbjct: 324 VERARKLKVNAGHLPGTDLGPVISPQSKQRINELVESGAKEGAKIVLDGRNIKV 377
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Anopheles gambiae (taxid: 7165) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q7KW39|MMSA_DROME Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila melanogaster GN=CG17896 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/360 (71%), Positives = 309/360 (85%)
Query: 21 RQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY 80
R + TTKL+IDGKFVESK +WID+H+PATN+VVTRVPKAT AEM++A+ S KKA+
Sbjct: 17 RSYSSAAPTTKLFIDGKFVESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAF 76
Query: 81 ETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS 140
+WS SI+TRQQV+F+LQ +IK NM +LA+NIT+EQGKTLADAEGDVLRGLQVVE CCS
Sbjct: 77 RSWSNQSILTRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCCS 136
Query: 141 IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
IP++ GET+A VA+DMD +S +PLGVTAG+ PFNFPAMIPLWMFPVAI GNT ++KP
Sbjct: 137 IPSLQMGETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLKP 196
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIY 260
SER PGA M+L+++L +AGCPPGVVNVIHG HDAVNFICD P+I+A+SFVGSDQAGKYIY
Sbjct: 197 SERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPEIKAVSFVGSDQAGKYIY 256
Query: 261 ERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV 320
ER KNGKRVQSNMGAKNHG+I+ DAN+ NTLNQL GAAFGAAGQRCMALST +FVG+A
Sbjct: 257 ERAGKNGKRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDAQ 316
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
W+P+L +RA+ LKV+AG+VPGTD+GPVIS +++RI LI+SGV EGA L+LDGR + V
Sbjct: 317 AWIPDLVERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITV 376
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q02253|MMSA_RAT Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 536 bits (1382), Expect = e-152, Method: Compositional matrix adjust.
Identities = 243/354 (68%), Positives = 301/354 (85%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ T KL+IDGKFVESK+ WID+HNPATNEVV RVP++T AEME+AVA+ K+A+ W+ T
Sbjct: 37 VPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMEAAVAACKRAFPAWADT 96
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQVL R Q +IK N+K++A IT EQGKTLADAEGDV RGLQVVE CS+ ++M
Sbjct: 97 SILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLML 156
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 157 GETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 216
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L +L +G P G +N+IHG H+AVNFICDHPDI+AISFVGS+QAG+YI+ERG++N
Sbjct: 217 ATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRN 276
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST + VGEA +WLPEL
Sbjct: 277 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPEL 336
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR +KV
Sbjct: 337 VERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGAKEGASILLDGRKIKV 390
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q9EQ20|MMSA_MOUSE Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust.
Identities = 244/354 (68%), Positives = 299/354 (84%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ T KL+IDGKFVESK+ WID+HNPATNEVV RVP++T AEM++AV S K+A+ W+ T
Sbjct: 37 VPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMDAAVESCKRAFPAWADT 96
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQVL R Q +IK N+K++A IT EQGKTLADAEGDV RGLQVVE CS+ ++M
Sbjct: 97 SILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLML 156
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 157 GETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 216
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L +L +G P G +N+IHG HDAVNFICDHPDI+AISFVGS+QAG+YI+ERG++N
Sbjct: 217 ATMLLAKLLQDSGAPDGTLNIIHGQHDAVNFICDHPDIKAISFVGSNQAGEYIFERGSRN 276
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 277 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPEL 336
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
RA+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR +KV
Sbjct: 337 VDRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRRIKV 390
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q29HB2|MMSA_DROPS Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA14712 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/362 (71%), Positives = 308/362 (85%)
Query: 19 TFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKK 78
T R + TTKL+IDGKFVESK +WID+H+PATN+VVTRVPKAT EM++A+ S KK
Sbjct: 15 TQRAYSSAAPTTKLFIDGKFVESKTKEWIDVHDPATNKVVTRVPKATQDEMQTALESNKK 74
Query: 79 AYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQC 138
A+ +WS SI+TRQ V+F+LQ +IK NM +LA+NIT+EQGKTLADAEGDVLRGLQVVE C
Sbjct: 75 AFRSWSNQSILTRQAVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHC 134
Query: 139 CSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVI 198
CSIP++ GET+A VA+DMD +S +PLGVTAGI PFNFPAMIPLWMFPVAI GNT ++
Sbjct: 135 CSIPSLQMGETVANVARDMDTYSLVMPLGVTAGIAPFNFPAMIPLWMFPVAITTGNTMLL 194
Query: 199 KPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKY 258
KPSER PGA M+L+++L +AGCPPGVVNVIHG HDAVNFICD P I+A+SFVGSDQAGKY
Sbjct: 195 KPSERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPAIKAVSFVGSDQAGKY 254
Query: 259 IYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
IYER KNGKRVQSNMGAKNHGVI+SDAN+ NTLNQL GAAFGAAGQRCMALST +FVG+
Sbjct: 255 IYERAGKNGKRVQSNMGAKNHGVILSDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGD 314
Query: 319 AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
A W+P+L +RA+ LKV+AG+VPGTD+GPVIS +++RI LI+SGV EGA L+LDGR +
Sbjct: 315 AQGWIPDLVERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKI 374
Query: 379 KV 380
V
Sbjct: 375 SV 376
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Drosophila pseudoobscura pseudoobscura (taxid: 46245) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q02252|MMSA_HUMAN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 237/354 (66%), Positives = 300/354 (84%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ T KL+I GKFVESK+ WID+HNPATNEV+ RVP+AT AEM++A+AS K+A+ W+ T
Sbjct: 37 VPTVKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADT 96
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
S+++RQQVL R Q +IK N+K++A+ IT EQGKTLADAEGDV RGLQVVE CS+ ++M
Sbjct: 97 SVLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMM 156
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 157 GETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 216
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L +L +G P G +N+IHG H+AVNFICDHPDI+AISFVGS++AG+YI+ERG+++
Sbjct: 217 ATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRH 276
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST + VGEA +WLPEL
Sbjct: 277 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPEL 336
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+ A+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR +KV
Sbjct: 337 VEHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKV 390
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q07536|MMSA_BOVIN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 527 bits (1357), Expect = e-149, Method: Compositional matrix adjust.
Identities = 236/354 (66%), Positives = 299/354 (84%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ T KL+IDGKF+ESK+ WID+HNPATNEV+ RVP++T AEM++AV+S K+ + W+ T
Sbjct: 39 VPTVKLFIDGKFIESKSDKWIDIHNPATNEVIGRVPESTKAEMDAAVSSCKRTFPAWADT 98
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQVL R Q +IK N+K++A I EQGKTLADAEGDV RGLQVVE CS+ ++M
Sbjct: 99 SILSRQQVLLRYQQLIKENLKEIARLIMLEQGKTLADAEGDVFRGLQVVEHACSVTSLML 158
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
G+T+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 159 GDTMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 218
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L + +G P G +N+IHG H+AVNFICDHPDI+AISFVGS+QAG+YI+ERG+++
Sbjct: 219 ATMLLAKLFQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRH 278
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 279 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPEL 338
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR++KV
Sbjct: 339 VERAKKLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRSIKV 392
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|P52713|MMSA_CAEEL Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/352 (68%), Positives = 289/352 (82%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSI 88
T KL+IDG+ VESK TD+++L NPATNEV+ VP AT AEM++AV SAK A+ TW TS
Sbjct: 29 TVKLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSP 88
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGE 148
+TRQQ +F+LQ +IK +MK+LAE+IT EQGKTL DAEGDV RGLQVVE CS+P++M GE
Sbjct: 89 LTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGE 148
Query: 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
TL V++DMD HSYR+PLGVTAGI PFNFPAMIPLWMFPVA+A GNT VIKPSE+DPGA
Sbjct: 149 TLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAA 208
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268
+LV++ +AG P G VN+IHG H AVNFICD+PDI+AISFVG D AGK+IYERGAKNGK
Sbjct: 209 QLLVELAKEAGVPDGCVNIIHGQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGK 268
Query: 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKK 328
RVQSNMGAKNHGVIM+DAN+ TLNQL AAFGAAGQRCMAL+T + VGEA WLPEL +
Sbjct: 269 RVQSNMGAKNHGVIMADANKEQTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVE 328
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+A+ LKV+AG P TD+GP+IS Q+K R+L LI+S EGA + LDG N+ V
Sbjct: 329 KAKNLKVNAGWKPDTDIGPLISKQSKARVLRLIESAKKEGAQVPLDGSNITV 380
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Caenorhabditis elegans (taxid: 6239) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q54I10|MMSA_DICDI Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1 | Back alignment and function description |
|---|
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/352 (61%), Positives = 274/352 (77%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSI 88
TTKL+I+GKFVESK +W+++ NPAT E+VT+VP +T EME+AV +A A+ W TS+
Sbjct: 29 TTKLFINGKFVESKTKEWLEVRNPATQELVTKVPVSTKEEMEAAVKAASDAFPAWRDTSV 88
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGE 148
R +++ +N+I NM ++A ITEEQGKTL DA+GDV RGL+VVE ++ ++M GE
Sbjct: 89 SNRSRIISNYKNLINKNMDKIAAIITEEQGKTLPDAKGDVFRGLEVVEHSVNVASLMMGE 148
Query: 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
T+ V+K++DI+SY PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPSER P A
Sbjct: 149 TVENVSKNVDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPSERVPSAS 208
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268
M LV + +AG P GVVNVIHG +AVNFICD P++RAISFVG+DQAG++I+ RG NGK
Sbjct: 209 MFLVQLAQEAGVPDGVVNVIHGGKEAVNFICDAPEVRAISFVGADQAGRHIHARGTANGK 268
Query: 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKK 328
RVQSNM AKNH I+ DA++ TL+ L GAAFGA+GQRCMALS +FVGE+ W+PEL +
Sbjct: 269 RVQSNMAAKNHATIVPDAHKERTLDALTGAAFGASGQRCMALSAAVFVGESKNWIPELAE 328
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
RA+ LKV+ G PG DLGPVIS +K+RI LIQSG+DEGA +LDGRN+ V
Sbjct: 329 RAKKLKVAGGAAPGADLGPVISAASKQRIHELIQSGIDEGAKCILDGRNVVV 380
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | ||||||
| 405970294 | 525 | Putative methylmalonate-semialdehyde deh | 0.822 | 0.697 | 0.706 | 1e-160 | |
| 242010445 | 526 | methylmalonate-semialdehyde dehydrogenas | 0.788 | 0.667 | 0.723 | 1e-159 | |
| 193605836 | 522 | PREDICTED: probable methylmalonate-semia | 0.811 | 0.691 | 0.727 | 1e-159 | |
| 321469876 | 525 | hypothetical protein DAPPUDRAFT_303718 [ | 0.795 | 0.674 | 0.734 | 1e-158 | |
| 157114716 | 521 | methylmalonate-semialdehyde dehydrogenas | 0.795 | 0.679 | 0.745 | 1e-156 | |
| 158290905 | 521 | AGAP002499-PA [Anopheles gambiae str. PE | 0.795 | 0.679 | 0.740 | 1e-155 | |
| 442752029 | 524 | Putative methylmalonate semialdehyde deh | 0.811 | 0.688 | 0.715 | 1e-155 | |
| 170048553 | 521 | methylmalonate-semialdehyde dehydrogenas | 0.795 | 0.679 | 0.734 | 1e-154 | |
| 50539808 | 525 | methylmalonate-semialdehyde dehydrogenas | 0.795 | 0.674 | 0.714 | 1e-153 | |
| 363734519 | 567 | PREDICTED: methylmalonate-semialdehyde d | 0.795 | 0.624 | 0.706 | 1e-152 |
| >gi|405970294|gb|EKC35210.1| Putative methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Crassostrea gigas] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 260/368 (70%), Positives = 321/368 (87%), Gaps = 2/368 (0%)
Query: 15 SHMKTFRQFIRHIA--TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESA 72
S +KTF +F TTKL+IDGKFVESK WID+H+PATNEVVTRVP++T EME+A
Sbjct: 14 SALKTFNRFYSASGAPTTKLFIDGKFVESKTNKWIDVHDPATNEVVTRVPESTQDEMEAA 73
Query: 73 VASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGL 132
VAS K+A++ WS+T+I+TRQQ++F+LQN+++ N+ +A+NIT+EQGKTL DAEGDV+RGL
Sbjct: 74 VASCKRAFDDWSQTTILTRQQLMFKLQNLVRENLSDIAKNITKEQGKTLVDAEGDVMRGL 133
Query: 133 QVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIAC 192
QVVE CCSI ++ GETL G+AKDMD ++RVPLGVTAGITPFNFPAMIPLWMFP+A+
Sbjct: 134 QVVEHCCSITSLQLGETLPGIAKDMDTMTFRVPLGVTAGITPFNFPAMIPLWMFPMALVT 193
Query: 193 GNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGS 252
GNT ++KPSERDPGACMML++++ +AG P GVVNVIHG HD+VNFICDHP+I+AISFVGS
Sbjct: 194 GNTSLMKPSERDPGACMMLMELVKEAGFPDGVVNVIHGRHDSVNFICDHPEIKAISFVGS 253
Query: 253 DQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALST 312
DQAG+YIYERG+KNGKRVQSNMGAKNHGVIM DAN+ N LNQLVGAAFGAAGQRCMALST
Sbjct: 254 DQAGQYIYERGSKNGKRVQSNMGAKNHGVIMPDANKENCLNQLVGAAFGAAGQRCMALST 313
Query: 313 VIFVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
+FVGEA W+PEL ++A+ LKV+AG+ PG DLGPVISP+AK+R+ L+QSG+D+GA +L
Sbjct: 314 AVFVGEARNWIPELVEKAKKLKVNAGHEPGADLGPVISPEAKQRVCDLVQSGIDQGAKIL 373
Query: 373 LDGRNLKV 380
LDGR++KV
Sbjct: 374 LDGRDVKV 381
|
Source: Crassostrea gigas Species: Crassostrea gigas Genus: Crassostrea Family: Ostreidae Order: Ostreoida Class: Bivalvia Phylum: Mollusca Superkingdom: |
| >gi|242010445|ref|XP_002425978.1| methylmalonate-semialdehyde dehydrogenase, putative [Pediculus humanus corporis] gi|212509969|gb|EEB13240.1| methylmalonate-semialdehyde dehydrogenase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 259/358 (72%), Positives = 313/358 (87%), Gaps = 7/358 (1%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
TKL+I+G+F++S + WIDLHNPA NE+VT+VP++T EMESAV SA KA+ TWSKTS++
Sbjct: 25 TKLFINGQFMDSNSKKWIDLHNPANNELVTKVPESTKEEMESAVESALKAFSTWSKTSVL 84
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
TRQQ++F+ Q+IIK N+K+LAENI EQGKT+ DAEGDVLRGLQVVE CSI ++ GE+
Sbjct: 85 TRQQIMFKYQSIIKDNIKKLAENIVLEQGKTMVDAEGDVLRGLQVVEHACSITSLQMGES 144
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
L+G++KDMDIHSYR+PLGV AGI PFNFPAMIPLWMFPVAI CGNT+V+KPSERDPGACM
Sbjct: 145 LSGISKDMDIHSYRLPLGVVAGIAPFNFPAMIPLWMFPVAIVCGNTYVMKPSERDPGACM 204
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269
+L++ML +AGCPPGVVNVIHGAHDAVNFICDHP I+A+SFVGS AG+YIYER K+GKR
Sbjct: 205 LLIEMLQEAGCPPGVVNVIHGAHDAVNFICDHPKIKAVSFVGSTTAGQYIYERSVKSGKR 264
Query: 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKR 329
VQ NMGAKNHGV+M DAN+ +TLNQLVGAAFGAAGQRCMALST +FVGEA +WLP+L +R
Sbjct: 265 VQCNMGAKNHGVVMVDANKEHTLNQLVGAAFGAAGQRCMALSTAVFVGEAQKWLPDLVER 324
Query: 330 AEALKVSAGN-------VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
A+ALKV+AGN +PGTDLGPVI+PQ+++RI LIQSG+DEGA +LDGRN+KV
Sbjct: 325 AKALKVNAGNFYNFLGHIPGTDLGPVITPQSQKRIHDLIQSGIDEGAKCVLDGRNIKV 382
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193605836|ref|XP_001944025.1| PREDICTED: probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 267/367 (72%), Positives = 311/367 (84%), Gaps = 6/367 (1%)
Query: 20 FRQFIRHIATTK------LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAV 73
F+Q IR AT +YIDGKFVESK DWID+HNPATNEV+++VPK T +EME AV
Sbjct: 12 FQQAIRFNATCSAIPKVPMYIDGKFVESKTNDWIDVHNPATNEVISKVPKCTQSEMEHAV 71
Query: 74 ASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ 133
S+K AY+ WSKTS++ RQQ++FR Q IIKANMK+LAENIT+EQGKTL DAEGDV RGLQ
Sbjct: 72 ESSKAAYKLWSKTSVMRRQQIMFRYQEIIKANMKKLAENITKEQGKTLIDAEGDVTRGLQ 131
Query: 134 VVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACG 193
VVE CC+ + + GE+L VA DMDIHSYR PLGVTAGI PFNFPAMIPLWMFPVAI+CG
Sbjct: 132 VVENCCNFTSSIMGESLPLVATDMDIHSYREPLGVTAGIAPFNFPAMIPLWMFPVAISCG 191
Query: 194 NTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSD 253
NT VIKPSER PG CMMLV+ML++AGCPPGVVN+IHG+ D VNFICD PDI+AISFVG++
Sbjct: 192 NTFVIKPSERVPGNCMMLVEMLSEAGCPPGVVNIIHGSVDTVNFICDAPDIKAISFVGAN 251
Query: 254 QAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV 313
AG++IY RG+KNGKRVQSNMGAKNHGVIM DAN+++ LN LVGAAFGAAGQRCMALST
Sbjct: 252 TAGEHIYTRGSKNGKRVQSNMGAKNHGVIMPDANKTSMLNSLVGAAFGAAGQRCMALSTA 311
Query: 314 IFVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLL 373
+FVG+A WLPELK RAE L V+AG+VP TD+GPVISP+AK +I SLIQSG+DEGA +LL
Sbjct: 312 VFVGDAKNWLPELKSRAENLNVNAGHVPNTDVGPVISPEAKNKIHSLIQSGIDEGAKILL 371
Query: 374 DGRNLKV 380
DGRN+ V
Sbjct: 372 DGRNISV 378
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|321469876|gb|EFX80854.1| hypothetical protein DAPPUDRAFT_303718 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 260/354 (73%), Positives = 308/354 (87%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
I TTKL+I+ K VESK +WIDL +PATNEV+T+VPK+T EME+AV SAK AY+TWSKT
Sbjct: 28 IPTTKLFINNKMVESKTNEWIDLCDPATNEVITKVPKSTREEMENAVESAKAAYKTWSKT 87
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI+TRQQV+ R Q+II+ NMK+LA++IT EQGKTL DAEGDVLRGLQVVE CCS+ ++
Sbjct: 88 SILTRQQVMLRYQHIIRNNMKELAKSITSEQGKTLVDAEGDVLRGLQVVEHCCSVTSLQL 147
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ +AKDMD S+R PLGV AGITPFNFPAMIPLWMFPVA+ CGNT+++KPSERDPG
Sbjct: 148 GETMPNIAKDMDTLSFRTPLGVCAGITPFNFPAMIPLWMFPVALVCGNTYIVKPSERDPG 207
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
ACMMLVDML +AG P GVVNVIHGAHD+VNFICDHPDI+AISFVGSDQAG+YIYERG+++
Sbjct: 208 ACMMLVDMLREAGAPDGVVNVIHGAHDSVNFICDHPDIKAISFVGSDQAGQYIYERGSRH 267
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGVIM DAN+ NTLNQLVGAAFGAAGQRCMALST +FVGEA W+P+L
Sbjct: 268 GKRVQANMGAKNHGVIMPDANKENTLNQLVGAAFGAAGQRCMALSTALFVGEAANWIPDL 327
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA+ LKV+AG++ DLGPVISP+AK RI L+QSG+DEGA +LDGR + V
Sbjct: 328 VERAKKLKVNAGHIADADLGPVISPEAKNRINKLVQSGIDEGAHCILDGRKIVV 381
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157114716|ref|XP_001652386.1| methylmalonate-semialdehyde dehydrogenase [Aedes aegypti] gi|122107065|sp|Q17M80.1|MMSA_AEDAE RecName: Full=Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; Short=MMSDH; Short=Malonate-semialdehyde dehydrogenase [acylating]; Flags: Precursor gi|108883539|gb|EAT47764.1| AAEL001134-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/354 (74%), Positives = 316/354 (89%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTK++IDGKFV+SK T+WIDLH+PATN+VVTRVPK T EMESAV S+KKA++TWS+T
Sbjct: 24 VPTTKMFIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVESSKKAFKTWSQT 83
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI+ RQQV+F+LQ++I+ NM +LA+NIT+EQGKTL DAEGDVLRGLQVVE CCSI ++
Sbjct: 84 SILGRQQVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQVVEHCCSITSLQM 143
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ +AKDMD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPSER PG
Sbjct: 144 GETVPNIAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPG 203
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A MML+++L +AGCPPGVVNVIHGAHDAVNFICD+P I+A+SFVGSDQAGKYIYER +N
Sbjct: 204 ATMMLMELLNEAGCPPGVVNVIHGAHDAVNFICDNPTIKAVSFVGSDQAGKYIYERAGRN 263
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQSNMGAKNHGVIM+DAN+ NTLNQL GAAFGAAGQRCMALST +FVGEA +W+P+L
Sbjct: 264 GKRVQSNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEAKQWIPDL 323
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA LKV+AG+VPGTD+GPVISPQ+K+RI L++SGV EGA L+LDGR++KV
Sbjct: 324 VERARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKV 377
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158290905|ref|XP_312441.4| AGAP002499-PA [Anopheles gambiae str. PEST] gi|74803744|sp|Q7QC84.2|MMSA_ANOGA RecName: Full=Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; Short=MMSDH; Short=Malonate-semialdehyde dehydrogenase [acylating]; Flags: Precursor gi|157018121|gb|EAA07972.4| AGAP002499-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/354 (74%), Positives = 312/354 (88%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTK++IDGKFVESK DWIDLH+PATNEVVTRVPK T EM++AV S+KKAY+TW ++
Sbjct: 24 VPTTKMFIDGKFVESKTNDWIDLHDPATNEVVTRVPKCTQDEMQTAVESSKKAYKTWRQS 83
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQV+ +LQ+II+ NM +LA+NIT+EQGKTL DAEGDVLRGLQVVE CCSI ++
Sbjct: 84 SILSRQQVMLKLQHIIRNNMSELAKNITKEQGKTLIDAEGDVLRGLQVVEHCCSITSLQM 143
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ +AKDMD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPSER PG
Sbjct: 144 GETVPNIAKDMDTYSYHLPLGVTAGIAPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPG 203
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L++ML +AGCPPGVVNVIHGAHDAVNF+CD+PDIRA+SFVGSDQAGKYIYER +N
Sbjct: 204 ATMLLMEMLNEAGCPPGVVNVIHGAHDAVNFVCDNPDIRAVSFVGSDQAGKYIYERAGRN 263
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ NMGAKNHGVIM+DAN+ NTLNQL GAAFGAAGQRCMALST +FVGEA W+P+L
Sbjct: 264 GKRVQCNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEARNWIPDL 323
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA LKV+AG++PGTDLGPVISPQ+K+RI L++SG EGA ++LDGRN+KV
Sbjct: 324 VERARKLKVNAGHLPGTDLGPVISPQSKQRINELVESGAKEGAKIVLDGRNIKV 377
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|442752029|gb|JAA68174.1| Putative methylmalonate semialdehyde dehydrogenase [Ixodes ricinus] | Back alignment and taxonomy information |
|---|
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/366 (71%), Positives = 304/366 (83%), Gaps = 5/366 (1%)
Query: 21 RQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY 80
R + + TK++I+G+FVESK T+W+DL NPATNE++TRVPK T AEM AV SAK+A+
Sbjct: 20 RGYAAAVPNTKMFINGQFVESKTTEWVDLKNPATNELITRVPKCTNAEMHEAVRSAKEAF 79
Query: 81 ETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS 140
TWS+TSI+TRQQ +F+LQ +IK NMK+LA N+TEEQGKTLADAEGDVLRGLQVVE C
Sbjct: 80 RTWSQTSILTRQQSMFKLQQLIKENMKRLAANVTEEQGKTLADAEGDVLRGLQVVEHACG 139
Query: 141 IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+ ++ GETL + KDMD SYR+PLGVTAGITPFNFPAMIPLWMFP+A+ CGNT V+KP
Sbjct: 140 VTSLQLGETLPSITKDMDTMSYRIPLGVTAGITPFNFPAMIPLWMFPLALVCGNTMVLKP 199
Query: 201 SERDPGACMMLVDMLTQAG-CPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYI 259
SERDPG MML+++L Q G GVVNVIHG HDAV FICDHPDIRAISFVGSDQAGK+I
Sbjct: 200 SERDPGCTMMLMELLKQTGXXXTGVVNVIHGTHDAVKFICDHPDIRAISFVGSDQAGKFI 259
Query: 260 YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA 319
YERG+KNGKRVQ NMGAKNHGV+M DAN+ TLNQL GAAFGAAGQRCMALST +FVGEA
Sbjct: 260 YERGSKNGKRVQCNMGAKNHGVVMPDANKEYTLNQLTGAAFGAAGQRCMALSTAVFVGEA 319
Query: 320 VEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
W+PEL +RA LKV+AG+VPG DLGPVISP+AKERI L++SGV EGA LLLDGR
Sbjct: 320 KNWIPELVERARKLKVNAGHVPGADLGPVISPEAKERICDLVESGVQEGAKLLLDGR--- 376
Query: 380 VGINVP 385
GI VP
Sbjct: 377 -GIVVP 381
|
Source: Ixodes ricinus Species: Ixodes ricinus Genus: Ixodes Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170048553|ref|XP_001853240.1| methylmalonate-semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167870633|gb|EDS34016.1| methylmalonate-semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/354 (73%), Positives = 314/354 (88%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTK++IDGKFV+SK T+WIDLH+PATN+VVTRVPK T AEME+AV S+KKA++TWS+T
Sbjct: 24 VPTTKMFIDGKFVDSKTTEWIDLHDPATNDVVTRVPKCTNAEMEAAVESSKKAFKTWSQT 83
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI+ RQQV+ +LQ+II+ NM ++A+NIT+EQGKTL DAEGDVLRGLQVVE CCSI ++
Sbjct: 84 SILGRQQVMLKLQHIIRNNMSEIAKNITKEQGKTLIDAEGDVLRGLQVVEHCCSITSLQM 143
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ +AKDMD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPSER PG
Sbjct: 144 GETMPNIAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPG 203
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A MML++ML +AGCPPGVVNVIHGAHDAVNFICD+P I+A+SFVGSDQAGKYIYER +N
Sbjct: 204 ATMMLMEMLNEAGCPPGVVNVIHGAHDAVNFICDNPAIKAVSFVGSDQAGKYIYERAGRN 263
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQSNMGAKNHG+IM+DAN+ NTLNQL GAAFGAAGQRCMALST +FVGE+ +W+P+L
Sbjct: 264 GKRVQSNMGAKNHGIIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGESKQWIPDL 323
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
RA LKV+AG+VPGTD+GPVISPQ+K+RI L++SG EGA ++LDGR++KV
Sbjct: 324 VDRARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGAKEGAKIVLDGRDIKV 377
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|50539808|ref|NP_001002374.1| methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Danio rerio] gi|49904357|gb|AAH75883.1| Zgc:92082 [Danio rerio] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/354 (71%), Positives = 303/354 (85%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTKL+IDGKFVESK++ W+D+HNPAT+EV+ RVPKAT EM +AV S +A++TWS+T
Sbjct: 27 VPTTKLFIDGKFVESKSSQWLDIHNPATSEVIGRVPKATQEEMLAAVDSCSRAFQTWSET 86
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI+ RQQ+ FR Q +IK N+K+LA+ IT EQGKTLADAEGDV RGLQVVE CSI ++M
Sbjct: 87 SILARQQIFFRYQQLIKDNIKELAKLITLEQGKTLADAEGDVFRGLQVVEHTCSITSLML 146
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GETL + KDMD ++YR+P+GV AGI PFNFPAMIPLWMFP+ + CGNT+++KPSER PG
Sbjct: 147 GETLPSLTKDMDTYTYRLPIGVCAGIAPFNFPAMIPLWMFPMGMVCGNTYLLKPSERVPG 206
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
MML +L AG P G +N+IHG HDAVNFICDHP IRAISFVGS+QAG+YIYERG+KN
Sbjct: 207 CTMMLAKLLQDAGAPDGTLNIIHGQHDAVNFICDHPAIRAISFVGSNQAGEYIYERGSKN 266
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQSNMGAKNHGVIM DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 267 GKRVQSNMGAKNHGVIMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEARDWLPEL 326
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA++L+V+AG+ PG D+GP+ISPQAKER+ SLIQSGVDEGA +LLDGRN+KV
Sbjct: 327 VERAKSLRVNAGDQPGADVGPLISPQAKERVNSLIQSGVDEGAKVLLDGRNVKV 380
|
Source: Danio rerio Species: Danio rerio Genus: Danio Family: Cyprinidae Order: Cypriniformes Class: Actinopterygii Phylum: Chordata Superkingdom: |
| >gi|363734519|ref|XP_421260.2| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Gallus gallus] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/354 (70%), Positives = 302/354 (85%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTKL+IDGKFVESK T+WID+HNPATNEVV RVPKAT +EME+AVAS KKA+ WS+T
Sbjct: 69 VPTTKLFIDGKFVESKTTEWIDIHNPATNEVVARVPKATTSEMEAAVASCKKAFWNWSET 128
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
S+++RQQ+ R Q +IK N+K++++ IT EQGKTLADAEGDV RGLQVVE CS+ +++
Sbjct: 129 SVLSRQQIFLRYQQLIKDNLKEISKLITFEQGKTLADAEGDVFRGLQVVEHACSVTSLIL 188
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD +YR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 189 GETMPSITKDMDTCTYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 248
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M L + AG P G +N+IHG H+AVNFICDHPDIRAISFVGS+QAG+YIYERG++N
Sbjct: 249 ALMFLAKLFQDAGAPDGTLNIIHGQHEAVNFICDHPDIRAISFVGSNQAGEYIYERGSRN 308
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 309 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAQKWLPEL 368
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA+ L+V+AG+ PG DLGP+ISPQAKER+ LIQ GV+EGA+LLLDGRN+KV
Sbjct: 369 VERAKNLRVNAGDQPGADLGPLISPQAKERVCHLIQKGVEEGASLLLDGRNIKV 422
|
Source: Gallus gallus Species: Gallus gallus Genus: Gallus Family: Phasianidae Order: Galliformes Class: Aves Phylum: Chordata Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | ||||||
| UNIPROTKB|Q17M80 | 521 | AAEL001134 "Probable methylmal | 0.795 | 0.679 | 0.745 | 5.8e-176 | |
| FB|FBgn0023537 | 520 | CG17896 [Drosophila melanogast | 0.808 | 0.692 | 0.711 | 2.1e-169 | |
| UNIPROTKB|Q29HB2 | 520 | GA14712 "Probable methylmalona | 0.813 | 0.696 | 0.712 | 3.8e-168 | |
| ZFIN|ZDB-GENE-030131-9192 | 525 | aldh6a1 "aldehyde dehydrogenas | 0.795 | 0.674 | 0.714 | 1.8e-161 | |
| UNIPROTKB|E1C155 | 538 | ALDH6A1 "Uncharacterized prote | 0.795 | 0.657 | 0.706 | 7.6e-161 | |
| RGD|621556 | 535 | Aldh6a1 "aldehyde dehydrogenas | 0.795 | 0.661 | 0.686 | 7.7e-159 | |
| MGI|MGI:1915077 | 535 | Aldh6a1 "aldehyde dehydrogenas | 0.795 | 0.661 | 0.689 | 1.3e-158 | |
| UNIPROTKB|J9P2I9 | 533 | ALDH6A1 "Uncharacterized prote | 0.804 | 0.671 | 0.675 | 2e-158 | |
| UNIPROTKB|F1S3H1 | 534 | ALDH6A1 "Uncharacterized prote | 0.795 | 0.662 | 0.683 | 2.6e-158 | |
| UNIPROTKB|Q02252 | 535 | ALDH6A1 "Methylmalonate-semial | 0.804 | 0.669 | 0.664 | 3.8e-157 |
| UNIPROTKB|Q17M80 AAEL001134 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
|---|
Score = 1441 (512.3 bits), Expect = 5.8e-176, Sum P(2) = 5.8e-176
Identities = 264/354 (74%), Positives = 316/354 (89%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTK++IDGKFV+SK T+WIDLH+PATN+VVTRVPK T EMESAV S+KKA++TWS+T
Sbjct: 24 VPTTKMFIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVESSKKAFKTWSQT 83
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI+ RQQV+F+LQ++I+ NM +LA+NIT+EQGKTL DAEGDVLRGLQVVE CCSI ++
Sbjct: 84 SILGRQQVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQVVEHCCSITSLQM 143
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ +AKDMD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPSER PG
Sbjct: 144 GETVPNIAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPG 203
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A MML+++L +AGCPPGVVNVIHGAHDAVNFICD+P I+A+SFVGSDQAGKYIYER +N
Sbjct: 204 ATMMLMELLNEAGCPPGVVNVIHGAHDAVNFICDNPTIKAVSFVGSDQAGKYIYERAGRN 263
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQSNMGAKNHGVIM+DAN+ NTLNQL GAAFGAAGQRCMALST +FVGEA +W+P+L
Sbjct: 264 GKRVQSNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEAKQWIPDL 323
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA LKV+AG+VPGTD+GPVISPQ+K+RI L++SGV EGA L+LDGR++KV
Sbjct: 324 VERARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKV 377
|
|
| FB|FBgn0023537 CG17896 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1384 (492.3 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 256/360 (71%), Positives = 309/360 (85%)
Query: 21 RQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY 80
R + TTKL+IDGKFVESK +WID+H+PATN+VVTRVPKAT AEM++A+ S KKA+
Sbjct: 17 RSYSSAAPTTKLFIDGKFVESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAF 76
Query: 81 ETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS 140
+WS SI+TRQQV+F+LQ +IK NM +LA+NIT+EQGKTLADAEGDVLRGLQVVE CCS
Sbjct: 77 RSWSNQSILTRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCCS 136
Query: 141 IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
IP++ GET+A VA+DMD +S +PLGVTAG+ PFNFPAMIPLWMFPVAI GNT ++KP
Sbjct: 137 IPSLQMGETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLKP 196
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIY 260
SER PGA M+L+++L +AGCPPGVVNVIHG HDAVNFICD P+I+A+SFVGSDQAGKYIY
Sbjct: 197 SERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPEIKAVSFVGSDQAGKYIY 256
Query: 261 ERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV 320
ER KNGKRVQSNMGAKNHG+I+ DAN+ NTLNQL GAAFGAAGQRCMALST +FVG+A
Sbjct: 257 ERAGKNGKRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDAQ 316
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
W+P+L +RA+ LKV+AG+VPGTD+GPVIS +++RI LI+SGV EGA L+LDGR + V
Sbjct: 317 AWIPDLVERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITV 376
|
|
| UNIPROTKB|Q29HB2 GA14712 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
Score = 1373 (488.4 bits), Expect = 3.8e-168, Sum P(2) = 3.8e-168
Identities = 258/362 (71%), Positives = 308/362 (85%)
Query: 19 TFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKK 78
T R + TTKL+IDGKFVESK +WID+H+PATN+VVTRVPKAT EM++A+ S KK
Sbjct: 15 TQRAYSSAAPTTKLFIDGKFVESKTKEWIDVHDPATNKVVTRVPKATQDEMQTALESNKK 74
Query: 79 AYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQC 138
A+ +WS SI+TRQ V+F+LQ +IK NM +LA+NIT+EQGKTLADAEGDVLRGLQVVE C
Sbjct: 75 AFRSWSNQSILTRQAVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHC 134
Query: 139 CSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVI 198
CSIP++ GET+A VA+DMD +S +PLGVTAGI PFNFPAMIPLWMFPVAI GNT ++
Sbjct: 135 CSIPSLQMGETVANVARDMDTYSLVMPLGVTAGIAPFNFPAMIPLWMFPVAITTGNTMLL 194
Query: 199 KPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKY 258
KPSER PGA M+L+++L +AGCPPGVVNVIHG HDAVNFICD P I+A+SFVGSDQAGKY
Sbjct: 195 KPSERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPAIKAVSFVGSDQAGKY 254
Query: 259 IYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
IYER KNGKRVQSNMGAKNHGVI+SDAN+ NTLNQL GAAFGAAGQRCMALST +FVG+
Sbjct: 255 IYERAGKNGKRVQSNMGAKNHGVILSDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGD 314
Query: 319 AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
A W+P+L +RA+ LKV+AG+VPGTD+GPVIS +++RI LI+SGV EGA L+LDGR +
Sbjct: 315 AQGWIPDLVERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKI 374
Query: 379 KV 380
V
Sbjct: 375 SV 376
|
|
| ZFIN|ZDB-GENE-030131-9192 aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1361 (484.2 bits), Expect = 1.8e-161, Sum P(2) = 1.8e-161
Identities = 253/354 (71%), Positives = 303/354 (85%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTKL+IDGKFVESK++ W+D+HNPAT+EV+ RVPKAT EM +AV S +A++TWS+T
Sbjct: 27 VPTTKLFIDGKFVESKSSQWLDIHNPATSEVIGRVPKATQEEMLAAVDSCSRAFQTWSET 86
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI+ RQQ+ FR Q +IK N+K+LA+ IT EQGKTLADAEGDV RGLQVVE CSI ++M
Sbjct: 87 SILARQQIFFRYQQLIKDNIKELAKLITLEQGKTLADAEGDVFRGLQVVEHTCSITSLML 146
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GETL + KDMD ++YR+P+GV AGI PFNFPAMIPLWMFP+ + CGNT+++KPSER PG
Sbjct: 147 GETLPSLTKDMDTYTYRLPIGVCAGIAPFNFPAMIPLWMFPMGMVCGNTYLLKPSERVPG 206
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
MML +L AG P G +N+IHG HDAVNFICDHP IRAISFVGS+QAG+YIYERG+KN
Sbjct: 207 CTMMLAKLLQDAGAPDGTLNIIHGQHDAVNFICDHPAIRAISFVGSNQAGEYIYERGSKN 266
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQSNMGAKNHGVIM DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 267 GKRVQSNMGAKNHGVIMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEARDWLPEL 326
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA++L+V+AG+ PG D+GP+ISPQAKER+ SLIQSGVDEGA +LLDGRN+KV
Sbjct: 327 VERAKSLRVNAGDQPGADVGPLISPQAKERVNSLIQSGVDEGAKVLLDGRNVKV 380
|
|
| UNIPROTKB|E1C155 ALDH6A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1360 (483.8 bits), Expect = 7.6e-161, Sum P(2) = 7.6e-161
Identities = 250/354 (70%), Positives = 302/354 (85%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ TTKL+IDGKFVESK T+WID+HNPATNEVV RVPKAT +EME+AVAS KKA+ WS+T
Sbjct: 40 VPTTKLFIDGKFVESKTTEWIDIHNPATNEVVARVPKATTSEMEAAVASCKKAFWNWSET 99
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
S+++RQQ+ R Q +IK N+K++++ IT EQGKTLADAEGDV RGLQVVE CS+ +++
Sbjct: 100 SVLSRQQIFLRYQQLIKDNLKEISKLITFEQGKTLADAEGDVFRGLQVVEHACSVTSLIL 159
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD +YR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 160 GETMPSITKDMDTCTYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 219
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M L + AG P G +N+IHG H+AVNFICDHPDIRAISFVGS+QAG+YIYERG++N
Sbjct: 220 ALMFLAKLFQDAGAPDGTLNIIHGQHEAVNFICDHPDIRAISFVGSNQAGEYIYERGSRN 279
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 280 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAQKWLPEL 339
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA+ L+V+AG+ PG DLGP+ISPQAKER+ LIQ GV+EGA+LLLDGRN+KV
Sbjct: 340 VERAKNLRVNAGDQPGADLGPLISPQAKERVCHLIQKGVEEGASLLLDGRNIKV 393
|
|
| RGD|621556 Aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1334 (474.7 bits), Expect = 7.7e-159, Sum P(2) = 7.7e-159
Identities = 243/354 (68%), Positives = 301/354 (85%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ T KL+IDGKFVESK+ WID+HNPATNEVV RVP++T AEME+AVA+ K+A+ W+ T
Sbjct: 37 VPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMEAAVAACKRAFPAWADT 96
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQVL R Q +IK N+K++A IT EQGKTLADAEGDV RGLQVVE CS+ ++M
Sbjct: 97 SILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLML 156
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 157 GETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 216
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L +L +G P G +N+IHG H+AVNFICDHPDI+AISFVGS+QAG+YI+ERG++N
Sbjct: 217 ATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRN 276
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST + VGEA +WLPEL
Sbjct: 277 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPEL 336
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR +KV
Sbjct: 337 VERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGAKEGASILLDGRKIKV 390
|
|
| MGI|MGI:1915077 Aldh6a1 "aldehyde dehydrogenase family 6, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 244/354 (68%), Positives = 299/354 (84%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ T KL+IDGKFVESK+ WID+HNPATNEVV RVP++T AEM++AV S K+A+ W+ T
Sbjct: 37 VPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMDAAVESCKRAFPAWADT 96
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQVL R Q +IK N+K++A IT EQGKTLADAEGDV RGLQVVE CS+ ++M
Sbjct: 97 SILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLML 156
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 157 GETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 216
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L +L +G P G +N+IHG HDAVNFICDHPDI+AISFVGS+QAG+YI+ERG++N
Sbjct: 217 ATMLLAKLLQDSGAPDGTLNIIHGQHDAVNFICDHPDIKAISFVGSNQAGEYIFERGSRN 276
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 277 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPEL 336
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
RA+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR +KV
Sbjct: 337 VDRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRRIKV 390
|
|
| UNIPROTKB|J9P2I9 ALDH6A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1330 (473.2 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 242/358 (67%), Positives = 302/358 (84%)
Query: 23 FIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET 82
F + T KL+IDGKFVESK+ WID+HNPATNEV+ RVP+AT AEM++AV S K+A+
Sbjct: 31 FSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAVTSCKRAFPA 90
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIP 142
W+ TS+++RQQVL R Q +IK N+K++A+ IT EQGKTLADAEGDV RGLQVVE CS+
Sbjct: 91 WADTSVLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVT 150
Query: 143 TIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202
++M GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSE
Sbjct: 151 SLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSE 210
Query: 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
R PGA M+L +L +G P G +N+IHG H+AVNFICDHPDI+AISFVGS+QAG+YI+ER
Sbjct: 211 RVPGASMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFER 270
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEW 322
G+++GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +W
Sbjct: 271 GSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKW 330
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
LPEL +RA+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR +KV
Sbjct: 331 LPELVERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKV 388
|
|
| UNIPROTKB|F1S3H1 ALDH6A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1329 (472.9 bits), Expect = 2.6e-158, Sum P(2) = 2.6e-158
Identities = 242/354 (68%), Positives = 302/354 (85%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ T KL+I GKF+ESK+ WID+HNPATNE++ RVP+AT AEM++AV+S K+A+ W+ T
Sbjct: 36 VPTVKLFIGGKFIESKSDKWIDIHNPATNELIGRVPQATKAEMDAAVSSCKRAFPAWADT 95
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
SI++RQQVL R Q +IK N+K++A+ IT EQGKTLADAEGDV RGLQVVE CS+ ++M
Sbjct: 96 SILSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLML 155
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSER PG
Sbjct: 156 GETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPG 215
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
A M+L +L +G P G +NVIHG H+AVNFICDHPDI+AISFVGS+QAG+YI+ERG+++
Sbjct: 216 ATMLLAKLLQDSGAPDGTLNVIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRH 275
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST I VGEA +WLPEL
Sbjct: 276 GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPEL 335
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+RA+ L+V+AG+ PG DLGP+ISPQAKER+ +LI SG EGA++LLDGRN+KV
Sbjct: 336 VERAKNLRVNAGDQPGADLGPLISPQAKERVCNLIDSGTKEGASILLDGRNIKV 389
|
|
| UNIPROTKB|Q02252 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1318 (469.0 bits), Expect = 3.8e-157, Sum P(2) = 3.8e-157
Identities = 238/358 (66%), Positives = 301/358 (84%)
Query: 23 FIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET 82
F + T KL+I GKFVESK+ WID+HNPATNEV+ RVP+AT AEM++A+AS K+A+
Sbjct: 33 FSSSVPTVKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPA 92
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIP 142
W+ TS+++RQQVL R Q +IK N+K++A+ IT EQGKTLADAEGDV RGLQVVE CS+
Sbjct: 93 WADTSVLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVT 152
Query: 143 TIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202
++M GET+ + KDMD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPSE
Sbjct: 153 SLMMGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSE 212
Query: 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
R PGA M+L +L +G P G +N+IHG H+AVNFICDHPDI+AISFVGS++AG+YI+ER
Sbjct: 213 RVPGATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFER 272
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEW 322
G+++GKRVQ+NMGAKNHGV+M DAN+ NTLNQLVGAAFGAAGQRCMALST + VGEA +W
Sbjct: 273 GSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKW 332
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
LPEL + A+ L+V+AG+ PG DLGP+I+PQAKER+ +LI SG EGA++LLDGR +KV
Sbjct: 333 LPELVEHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKV 390
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| B8DCT8 | IOLA_LISMH | 1, ., 2, ., 1, ., 1, 8 | 0.4582 | 0.7775 | 0.7090 | yes | N/A |
| Q02253 | MMSA_RAT | 1, ., 2, ., 1, ., 2, 7 | 0.6864 | 0.7955 | 0.6616 | yes | N/A |
| A5YBJ3 | IOLA_LACCA | 1, ., 2, ., 1, ., 1, 8 | 0.4388 | 0.8 | 0.7235 | yes | N/A |
| A4IPB2 | IOLA1_GEOTN | 1, ., 2, ., 1, ., 1, 8 | 0.4558 | 0.7865 | 0.7231 | yes | N/A |
| A8FDV4 | IOLA_BACP2 | 1, ., 2, ., 1, ., 1, 8 | 0.4380 | 0.7775 | 0.7119 | yes | N/A |
| Q17M80 | MMSA_AEDAE | 1, ., 2, ., 1, ., 2, 7 | 0.7457 | 0.7955 | 0.6794 | N/A | N/A |
| Q81DR5 | IOLA_BACCR | 1, ., 2, ., 1, ., 1, 8 | 0.4632 | 0.7932 | 0.7263 | yes | N/A |
| Q723T1 | IOLA_LISMF | 1, ., 2, ., 1, ., 1, 8 | 0.4553 | 0.7775 | 0.7090 | yes | N/A |
| C1KZ99 | IOLA_LISMC | 1, ., 2, ., 1, ., 1, 8 | 0.4553 | 0.7775 | 0.7090 | yes | N/A |
| Q7KW39 | MMSA_DROME | 1, ., 2, ., 1, ., 2, 7 | 0.7111 | 0.8089 | 0.6923 | yes | N/A |
| Q29HB2 | MMSA_DROPS | 1, ., 2, ., 1, ., 2, 7 | 0.7127 | 0.8134 | 0.6961 | yes | N/A |
| P52713 | MMSA_CAEEL | 1, ., 2, ., 1, ., 2, 7 | 0.6875 | 0.7887 | 0.6711 | yes | N/A |
| A7ZAI1 | IOLA_BACA2 | 1, ., 2, ., 1, ., 1, 8 | 0.4687 | 0.7887 | 0.7207 | yes | N/A |
| Q6HIK3 | IOLA2_BACHK | 1, ., 2, ., 1, ., 1, 8 | 0.4712 | 0.7752 | 0.7084 | yes | N/A |
| Q8EMV4 | IOLA2_OCEIH | 1, ., 2, ., 1, ., 1, 8 | 0.4659 | 0.7842 | 0.7181 | yes | N/A |
| A0REB5 | IOLA2_BACAH | 1, ., 2, ., 1, ., 1, 8 | 0.4683 | 0.7752 | 0.7084 | yes | N/A |
| Q4V1F6 | IOLA3_BACCZ | 1, ., 2, ., 1, ., 1, 8 | 0.4712 | 0.7752 | 0.7084 | yes | N/A |
| Q738L2 | IOLA_BACC1 | 1, ., 2, ., 1, ., 1, 8 | 0.4676 | 0.7955 | 0.7283 | yes | N/A |
| Q7QC84 | MMSA_ANOGA | 1, ., 2, ., 1, ., 2, 7 | 0.7401 | 0.7955 | 0.6794 | yes | N/A |
| Q02252 | MMSA_HUMAN | 1, ., 2, ., 1, ., 2, 7 | 0.6694 | 0.7955 | 0.6616 | yes | N/A |
| Q9EQ20 | MMSA_MOUSE | 1, ., 2, ., 1, ., 2, 7 | 0.6892 | 0.7955 | 0.6616 | yes | N/A |
| A9VMS6 | IOLA2_BACWK | 1, ., 2, ., 1, ., 1, 8 | 0.4661 | 0.7932 | 0.7308 | yes | N/A |
| Q92EQ7 | IOLA_LISIN | 1, ., 2, ., 1, ., 1, 8 | 0.4582 | 0.7775 | 0.7090 | yes | N/A |
| Q8Y9Y4 | IOLA_LISMO | 1, ., 2, ., 1, ., 1, 8 | 0.4582 | 0.7775 | 0.7090 | yes | N/A |
| Q63B74 | IOLA2_BACCZ | 1, ., 2, ., 1, ., 1, 8 | 0.4655 | 0.7752 | 0.7069 | yes | N/A |
| B7H597 | IOLA_BACC4 | 1, ., 2, ., 1, ., 1, 8 | 0.4632 | 0.7932 | 0.7263 | yes | N/A |
| Q81QB6 | IOLA2_BACAN | 1, ., 2, ., 1, ., 1, 8 | 0.4712 | 0.7752 | 0.7084 | yes | N/A |
| A7GPH3 | IOLA_BACCN | 1, ., 2, ., 1, ., 1, 8 | 0.4563 | 0.7955 | 0.7283 | yes | N/A |
| Q5L025 | IOLA1_GEOKA | 1, ., 2, ., 1, ., 1, 8 | 0.4768 | 0.7775 | 0.7090 | yes | N/A |
| B7HR31 | IOLA_BACC7 | 1, ., 2, ., 1, ., 1, 8 | 0.4676 | 0.7955 | 0.7283 | yes | N/A |
| Q0WM29 | MMSA_ARATH | 1, ., 2, ., 1, ., 2, 7 | 0.5965 | 0.7730 | 0.5667 | yes | N/A |
| Q65D00 | IOLA2_BACLD | 1, ., 2, ., 1, ., 1, 8 | 0.4659 | 0.7887 | 0.7207 | yes | N/A |
| P42412 | IOLA_BACSU | 1, ., 2, ., 1, ., 1, 8 | 0.4659 | 0.7887 | 0.7207 | yes | N/A |
| B9IZZ7 | IOLA_BACCQ | 1, ., 2, ., 1, ., 1, 8 | 0.4676 | 0.7955 | 0.7283 | yes | N/A |
| Q07536 | MMSA_BOVIN | 1, ., 2, ., 1, ., 2, 7 | 0.6666 | 0.7955 | 0.6592 | yes | N/A |
| B7IW48 | IOLA_BACC2 | 1, ., 2, ., 1, ., 1, 8 | 0.4632 | 0.7932 | 0.7263 | yes | N/A |
| Q5WKZ1 | IOLA1_BACSK | 1, ., 2, ., 1, ., 1, 8 | 0.4617 | 0.7910 | 0.7169 | yes | N/A |
| Q54I10 | MMSA_DICDI | 1, ., 2, ., 1, ., 2, 7 | 0.6136 | 0.7887 | 0.6647 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 1.2.1.27 | 0.946 |
| 4th Layer | 1.2.1.18 | 0.946 |
| 3rd Layer | 1.2.1 | 0.963 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 445 | |||
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 0.0 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 0.0 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 1e-148 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-114 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-109 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 6e-98 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 4e-92 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 9e-89 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-80 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 7e-79 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 7e-78 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 6e-76 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 5e-75 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 3e-72 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 5e-72 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 1e-70 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 2e-70 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 3e-70 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-68 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 6e-66 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 3e-64 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-63 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-63 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 7e-63 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 9e-63 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 9e-63 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-61 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 5e-61 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 5e-61 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 2e-60 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 2e-60 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-59 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 3e-59 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 3e-58 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 4e-58 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 5e-58 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 8e-57 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-56 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 2e-56 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 9e-56 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-55 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-55 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 5e-55 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 7e-55 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 8e-55 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 8e-55 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 3e-54 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 2e-53 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-52 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 6e-52 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 2e-51 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 9e-51 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 2e-50 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 6e-50 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-49 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 2e-48 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 7e-48 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 2e-47 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-47 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 6e-47 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 6e-47 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 8e-47 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 9e-46 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 5e-45 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 9e-45 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 9e-45 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 2e-44 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 1e-43 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 5e-43 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 2e-41 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 4e-41 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-40 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-39 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 2e-38 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 7e-38 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-37 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-37 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 6e-37 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 3e-35 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 3e-35 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 1e-34 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 5e-34 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 3e-33 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 7e-33 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-31 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 3e-31 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 5e-29 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 5e-27 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 8e-27 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 4e-26 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 1e-24 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-24 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-22 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 2e-22 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-22 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 4e-22 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 1e-19 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 4e-19 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 6e-19 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-17 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 5e-14 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 4e-13 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 5e-13 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 5e-12 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-11 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-10 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 3e-10 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-09 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 2e-09 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 4e-09 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-08 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 6e-08 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 9e-05 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 2e-04 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 5e-04 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.002 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 639 bits (1651), Expect = 0.0
Identities = 220/352 (62%), Positives = 278/352 (78%), Gaps = 1/352 (0%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
KL+I+G++VESK T+W+D++NPAT EV+ RVP AT E+++AVA+AK A+ WS T ++
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVL 60
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
RQQV+F+ + +++ N+ +LA IT E GKTLADA GDVLRGL+VVE CSIP +++GE
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY 120
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
L VA+ +D +SYR PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPSER PGA M
Sbjct: 121 LENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM 180
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269
L ++L +AG P GV+NV+HG +AVN + DHPDI+A+SFVGS G+YIYER A NGKR
Sbjct: 181 RLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240
Query: 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-EWLPELKK 328
VQ+ GAKNH V+M DA+ T N LVGAAFGAAGQRCMALS + VG+ EW+P+L +
Sbjct: 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVE 300
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
RA+ LKV AG+ PG D+GPVISP AKERI LI+SGV+EGA L+LDGR +KV
Sbjct: 301 RAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKV 352
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 522 bits (1347), Expect = 0.0
Identities = 185/350 (52%), Positives = 258/350 (73%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
+I GKF E + +I + NPATNEV T+V A+ E+++AVASA++ + TW +TS+
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQ 61
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R VL R Q ++K + ++AE IT E GKT +DA GDV RGL+VVE C + ++++GET
Sbjct: 62 RTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETS 121
Query: 151 AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMM 210
VA +D++S R PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPSE+ P A +
Sbjct: 122 TQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVK 181
Query: 211 LVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
L ++ ++AG P GV+NV+HG +AV+ + +HPD++A+SFVGS G+YI+ G+ +GKRV
Sbjct: 182 LAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV 241
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRA 330
Q+ GAKNH V+M DA++ + LVGAA+GAAGQRCMA+S + VG A EW+PE+++RA
Sbjct: 242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRERA 301
Query: 331 EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
E +++ G+ PG ++GP+I+PQAK+R+ SLI G EGA +LLDGR KV
Sbjct: 302 EKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKV 351
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 435 bits (1120), Expect = e-148
Identities = 207/347 (59%), Positives = 265/347 (76%)
Query: 34 IDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQ 93
I G FVES+++ +ID+ NPAT EVV++VP T E ++AV++AK+A+ W T I TRQ+
Sbjct: 118 IGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQR 177
Query: 94 VLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV 153
V+ + Q +I+ NM +LA NIT EQGKTL D+ GD+ RGL+VVE C + T+ GE L V
Sbjct: 178 VMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNV 237
Query: 154 AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD 213
+ +D +S R PLGV AGI PFNFPAMIPLWMFPVA+ CGNT ++KPSE+DPGA ++L +
Sbjct: 238 SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAE 297
Query: 214 MLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN 273
+ +AG P GV+N++HG +D VN ICD DIRA+SFVGS+ AG +IY R A GKR+QSN
Sbjct: 298 LAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSN 357
Query: 274 MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEAL 333
MGAKNHG+++ DAN TLN L+ A FGAAGQRCMALSTV+FVG+A W +L +RA+AL
Sbjct: 358 MGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKAL 417
Query: 334 KVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
KV+ G+ P DLGPVIS QAKERI LIQSGVD+GA LLLDGR++ V
Sbjct: 418 KVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVV 464
|
Length = 604 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 342 bits (879), Expect = e-114
Identities = 129/342 (37%), Positives = 204/342 (59%), Gaps = 6/342 (1%)
Query: 38 FVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFR 97
+V+S +++ I++ NPAT EV+ VP AT ++++AVA+A+ A++ W+KT R +L +
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLK 59
Query: 98 LQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDM 157
++++ +LAE T E GK LA+A G+V R + + + ++GETL +
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLP-SDPGV 118
Query: 158 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQ 217
++ R PLGV ITP+NFP ++ W A+A GNT V+KPSE P ++L ++ +
Sbjct: 119 LAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEE 178
Query: 218 AGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGA 276
AG PPGV+NV+ G + + + +HPD+ +SF GS + G+ I + AKN KRV +G
Sbjct: 179 AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGG 238
Query: 277 KNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALK 334
KN ++ DA+ + V AFG AGQ C A S + V E++ E++ L + A++LK
Sbjct: 239 KNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGS-RLLVHESIYDEFVERLVEAAKSLK 297
Query: 335 VSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
V P TD+GP+IS + +ER+LS I+ +EGA LL G
Sbjct: 298 VGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE 339
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-109
Identities = 130/349 (37%), Positives = 196/349 (56%), Gaps = 5/349 (1%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
KL IDG++V+ I++ NPAT EV+ VP AT ++++AVA+A+ A+E WS+ S
Sbjct: 1 YKLLIDGEWVD--GASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAE 58
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L R+ ++++A ++LA IT E GK +++A G++ R + ++GET
Sbjct: 59 ERAAILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGET 118
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ K R PLGV ITP+NFP + W A+A GNT V+KPSE+ P + +
Sbjct: 119 IP-TDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSAL 177
Query: 210 MLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268
L ++ +AG P GV+NV+ G + + + HPD+ AISF GS G+ I A N K
Sbjct: 178 ALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLK 237
Query: 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE-AVEWLPELK 327
V +G K+ +++ DA+ ++ V AF AGQRC A S +I E++ L
Sbjct: 238 PVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLV 297
Query: 328 KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
RA +LKV P TDLGP+IS + +R+ I+ V EGA LL G+
Sbjct: 298 ARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGK 346
|
Length = 472 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 301 bits (773), Expect = 6e-98
Identities = 138/353 (39%), Positives = 203/353 (57%), Gaps = 5/353 (1%)
Query: 33 YIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
YI G++V+S + + D NPA EVV P +T +++++AV +A++A+ W K R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
+ LFR ++K ++LA +T E GK LA+ GDV + + + + GET+
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVP 121
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+ D + R P+GV A ITP+NFP IP W A+ CGNT V KP+E P + L
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKL 181
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
V++ +AG PPGVVNV+HG + V + +HPD+ +SF GS + G+ I E A+ KRV
Sbjct: 182 VELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRV 241
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKK 328
MG KN ++M DA+ L + +AFG GQRC A S +I V E+V E+L +
Sbjct: 242 ALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLI-VHESVYDEFLKRFVE 300
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
RA+ L+V G TD+GP+I+ E++L+ + G +EGATLLL G L G
Sbjct: 301 RAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGG 353
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 286 bits (734), Expect = 4e-92
Identities = 129/351 (36%), Positives = 195/351 (55%), Gaps = 7/351 (1%)
Query: 33 YIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
YIDG++V + + NP+ T++VV + +A+ + ++A+A+A A+ W +TS R
Sbjct: 4 YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEAR 61
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
+L + + ++A ++LA +T E+GKTL +A G+V R Q+ + GETL
Sbjct: 62 ADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLP 121
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+++ + R PLGV ITP+NFP IP W A+A GNT V KP+E P + L
Sbjct: 122 STRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWAL 181
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
V++L +AG P GV N++ G+ V + +HPD+ A+SF GS G+ I A G RV
Sbjct: 182 VEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARV 241
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKK 328
Q MG KN V++ DA+ + V AF + GQRC A S +I V E + ++ L +
Sbjct: 242 QLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLI-VTEGIHDRFVEALVE 300
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
R +ALKV G D+GPV+S + E+ L I+ EGA L+ G LK
Sbjct: 301 RTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLK 351
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 9e-89
Identities = 109/310 (35%), Positives = 166/310 (53%), Gaps = 4/310 (1%)
Query: 70 ESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVL 129
++AVA+A+ A++ W+ R +L +L ++++ ++LA T E GK + +A G+V
Sbjct: 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVA 60
Query: 130 RGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA 189
R + + GE + R PLGV ITP+NFP ++ W A
Sbjct: 61 RAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPA 120
Query: 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAIS 248
+A GNT V+KPSE P ++L ++L +AG PPGV+NV+ G + + HP + IS
Sbjct: 121 LAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKIS 180
Query: 249 FVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCM 308
F GS GK I A+N KRV +G K+ ++ DA+ + V AFG AGQ C
Sbjct: 181 FTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240
Query: 309 ALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVD 366
A S + V E++ E++ L +R +ALKV P TD+GP+IS +R+L+ I+
Sbjct: 241 AAS-RLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKA 299
Query: 367 EGATLLLDGR 376
EGA LL G+
Sbjct: 300 EGAKLLCGGK 309
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 256 bits (657), Expect = 1e-80
Identities = 109/350 (31%), Positives = 180/350 (51%), Gaps = 8/350 (2%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
I G++V S NPA E + RV A+P ++E+AVA+A++A++ W K R
Sbjct: 2 VIGGEWVGSGGET-FTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRG 60
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG 152
+++ ++ ++ + L ++ E GK L + G+V + + + + ++ G T+
Sbjct: 61 EIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPS 120
Query: 153 VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG---ACM 209
+ PLGV IT FNFP +P W +A+ CGNT V KPSE P A
Sbjct: 121 ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVT 180
Query: 210 -MLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268
+L ++L + G PPGVVN++ G D + P + +SF GS + G+ + E A+
Sbjct: 181 KILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFG 240
Query: 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPEL 326
RV +G N ++M DA+ + ++ AA G AGQRC +I V E+V E+L L
Sbjct: 241 RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLI-VHESVYDEFLERL 299
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
K + +++ GT +GP+I+ A E+ L+ I+ +G T+L G+
Sbjct: 300 VKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGK 349
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 251 bits (644), Expect = 7e-79
Identities = 118/353 (33%), Positives = 197/353 (55%), Gaps = 6/353 (1%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
YI+G+FV S + + ID+ NPAT EVV VP AT + + AV +A+ A + W + I R
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG 152
L +L ++I+ N +LA+ I EEQGKTL+ A +V ++ ++GE +
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPS 120
Query: 153 VAKDMDIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+ +I ++VP+GV AGI P+NFP +I + P A+ GNT VIKPSE P +
Sbjct: 121 DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP-ALVTGNTIVIKPSEETPLNALEF 179
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
+++ +AG P GV+N++ G V + + HP + IS GS +AG+ I E A+N +V
Sbjct: 180 AELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKV 239
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKK 328
+G K ++M DA+ + +V + GQ C + ++V E + E++ +L +
Sbjct: 240 SLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTC-AERVYVHEDIYDEFMEKLVE 298
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+ +A+KV TD+GP+++ A +++ +++ V+ GATLL G+ +
Sbjct: 299 KMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGE 351
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 248 bits (637), Expect = 7e-78
Identities = 117/336 (34%), Positives = 188/336 (55%), Gaps = 18/336 (5%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT EV+ VP A A+ ++A+ +A A++TW KT+ R +L R ++I+ + LA
Sbjct: 3 NPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLA 62
Query: 111 ENITEEQGKTLADAEGDVLRGLQVV----EQCCSIPTIMQGETLAGVAKDMDIHSYRVPL 166
+T EQGK LA+A G+V + E+ I G T+ A I + P+
Sbjct: 63 RLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRI----YGRTIPSPAPGKRILVIKQPV 118
Query: 167 GVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVV 225
GV A ITP+NFP AMI + P A+A G T V+KP+E P + + L ++ +AG P GV+
Sbjct: 119 GVVAAITPWNFPAAMITRKIAP-ALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVL 177
Query: 226 NVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHG--VI 282
NV+ G+ + +C P +R ISF GS GK + + A KRV +G + ++
Sbjct: 178 NVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGG--NAPFIV 235
Query: 283 MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNV 340
DA+ ++ + + F AGQ C+ + I+V E++ E++ +L +R + LKV G
Sbjct: 236 FDDADLDKAVDGAIASKFRNAGQTCVC-ANRIYVHESIYDEFVEKLVERVKKLKVGNGLD 294
Query: 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
GTD+GP+I+ +A E++ +L++ V +GA +L G+
Sbjct: 295 EGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGK 330
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 6e-76
Identities = 116/333 (34%), Positives = 182/333 (54%), Gaps = 10/333 (3%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
NPAT EV+ +VP+ AE+++AVA+AK+A+ WS+ S R ++L ++ ++I+A +L
Sbjct: 2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADEL 61
Query: 110 AENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSY--RVPL 166
A + + GK + A D+ R + GE+ +D +Y R P+
Sbjct: 62 ALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYP---QDGGALNYVLRQPV 118
Query: 167 GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226
GV ITP+N P M+ W A+A GNT V+KPSE P +L ++ +AG PPGVVN
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 227 VIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285
V+HG +A + HPD+ ISF G G+ I A N K V +G KN ++ +D
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFAD 238
Query: 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGT 343
A+ ++ V ++F G+ C+A + I V ++ E+L +RA+ALKV P T
Sbjct: 239 ADLDRAVDAAVRSSFSNNGEVCLA-GSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
++GP+IS + E++L ++ EGAT+L G
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGG 330
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 5e-75
Identities = 113/335 (33%), Positives = 172/335 (51%), Gaps = 15/335 (4%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
NPAT EV P A+ A+++ AVA+AK A+ WS T + R+ L + + I+AN ++L
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEEL 61
Query: 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIP----TIMQGETLAGVAKDMDIHSYRVP 165
A +T EQGK LA+A+ +V + + S+ I +T + R P
Sbjct: 62 ARLLTLEQGKPLAEAQFEVGGAVAWLRYTASLDLPDEVIEDDDT-------RRVELRRKP 114
Query: 166 LGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVV 225
LGV A I P+NFP ++ W A+ GNT V+KPS P + L ++ + PPGV+
Sbjct: 115 LGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVL 173
Query: 226 NVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285
NV+ G + + HPDIR ISF GS GK + AK KRV +G + +++ D
Sbjct: 174 NVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPD 233
Query: 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGT 343
+ +L AF +GQ C A+ + +V E++ E+ L A+A V G PGT
Sbjct: 234 VDIDAVAPKLFWGAFINSGQVCAAIKRL-YVHESIYDEFCEALVALAKAAVVGDGLDPGT 292
Query: 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
LGPV + +++ L++ +GA +L G L
Sbjct: 293 TLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPL 327
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 234 bits (600), Expect = 3e-72
Identities = 128/358 (35%), Positives = 182/358 (50%), Gaps = 30/358 (8%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
YIDG +V T+ ID+ NPAT EV+ VP T A+++ AVA+A++A+ WS TS+ R
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEER 60
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
+L R+ +A +LA+ IT E G A + R QV I A
Sbjct: 61 AALLERIAEAYEARADELAQAITLEMG-----APITLARAAQV--GL----GIGHLRAAA 109
Query: 152 GVAKDMDIHSY-------RVPLGVTAGITPFNFPA-MIPLWMFPVAIACGNTHVIKPSER 203
KD + R P+GV ITP+N+P I L + P A+A G T V+KPSE
Sbjct: 110 DALKDFEFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAP-ALAAGCTVVLKPSEV 168
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++L ++L +AG P GV N+++G V + HPD+ +SF GS +AGK + E
Sbjct: 169 APLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEA 228
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFV-----G 317
A KRV +G K+ +I+ DA+ + + V A F +GQ C A T + V
Sbjct: 229 AADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAP-TRMLVPRSRYA 287
Query: 318 EAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
EA E AEA V P T LGP+ S +R+ IQ G++EGA L+ G
Sbjct: 288 EAEE---IAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGG 342
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 5e-72
Identities = 116/349 (33%), Positives = 194/349 (55%), Gaps = 7/349 (2%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIIT 90
YIDG++VE+ + D+ NPA EV+ VP+ T + + A+A+A++A+++ W
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R +LFR+ + I+ + ++LA T GKTL ++E D+ + T GE
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120
Query: 151 AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMM 210
V + + R P+GV ITP+N+P + W A+A GNT VIKPSE P +
Sbjct: 121 D-VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIA 179
Query: 211 LVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269
L +++ +AG P GVVN++ G+ V + + PD+ +SF G G+ I A N K+
Sbjct: 180 LFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239
Query: 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELK 327
V +G KN ++ +DA+ ++Q + F AGQ C A S ++ V E++ +++ L
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLL-VEESIHDKFVAALA 298
Query: 328 KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+RA+ +K+ G T++GP++S + +E++LS IQ G +EGA L+ G+
Sbjct: 299 ERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGK 347
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 230 bits (589), Expect = 1e-70
Identities = 123/355 (34%), Positives = 192/355 (54%), Gaps = 13/355 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWS--KTS 87
T L+I+ +FV+S + NPAT EV+ +V +A ++++AV +A+ A+ET K
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTL-ADAEGDVLRGLQVVEQCCSIPTIMQ 146
R ++L +L ++I+ + +LA + + GK L A+GDV ++ + +Q
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 147 GETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204
G+T + D + +Y R P+GV I P+NFP ++ W A+A GNT V+KP+E+
Sbjct: 124 GKT---IPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQT 180
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263
P + + L +++ +AG PPGVVN++ G A I H D+ I+F GS G+ I E
Sbjct: 181 PLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAA 240
Query: 264 AK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
AK N K+V +G K+ ++ DA+ + F GQ C A S IFV E++
Sbjct: 241 AKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSR-IFVQESIYD 299
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E++ + K RAE V P T GP +S ++ILS I+SG EGATLL G
Sbjct: 300 EFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGG 354
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 2e-70
Identities = 137/355 (38%), Positives = 196/355 (55%), Gaps = 15/355 (4%)
Query: 32 LYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
L I GK V ++ I+ NPA +EV+ V KAT E E+AV +A+ A+ TW +T
Sbjct: 35 LVIGGKEVRTEEK--IESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEE 92
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R ++L R +++ +LA + E GK A+A+ DV + +E ++G +
Sbjct: 93 RARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPV 152
Query: 151 AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMM 210
V + + + YR PLGV A I+P+NFP I M A+ GNT V+KP+E P
Sbjct: 153 EMVPGEDNRYVYR-PLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAK 211
Query: 211 LVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER------G 263
LV++L +AG PPGVVN + G + V +++ +HPD+R I+F GS + G IYER G
Sbjct: 212 LVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPG 271
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
K KRV + MG KN ++ DA+ +V +AFG GQ+C A S VI V E+V E
Sbjct: 272 QKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVI-VHESVYDE 330
Query: 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+L L +R +ALKV P +GPVI A++RI I+ G EG LLL G
Sbjct: 331 FLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGE 384
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 3e-70
Identities = 108/332 (32%), Positives = 176/332 (53%), Gaps = 6/332 (1%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIITRQQVLFRLQNIIKANMK 107
NPAT E RVP+A+ A+++ AVA+A+ A+E W K + R ++L RL ++I+AN +
Sbjct: 2 INPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAE 61
Query: 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLG 167
+LAE T + GK + + V + + ++G + D + R PLG
Sbjct: 62 ELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLG 121
Query: 168 VTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227
V A ITP+N P ++ A+A GNT V+KPSE P + + L + +AG PPGVVNV
Sbjct: 122 VVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNV 181
Query: 228 IHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
+ G + + +HP + I+F G + G++I A+N V +G K+ ++ DA
Sbjct: 182 VTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDA 241
Query: 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTD 344
+ +N +V F AAGQ C+A S + V ++ E++ L RA A++V P T
Sbjct: 242 DLDAAVNGVVAGIFAAAGQTCVAGSR-LLVQRSIYDEFVERLVARARAIRVGDPLDPETQ 300
Query: 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+GP+ + + E++ + +EGA +L G
Sbjct: 301 MGPLATERQLEKVERYVARAREEGARVLTGGE 332
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 1e-68
Identities = 112/376 (29%), Positives = 169/376 (44%), Gaps = 35/376 (9%)
Query: 74 ASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ 133
A+A+ A++ W+ R +L ++ ++++ ++LA T E GK + +A G+V R +
Sbjct: 1 AAARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAID 60
Query: 134 VVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACG 193
+ + G L + + R PLGV ITP+NFP ++ W A+A G
Sbjct: 61 TFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAG 120
Query: 194 NTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGS 252
NT V+KPSE P + L ++L +AG PPGVVNV+ G D V + HP + ISF GS
Sbjct: 121 NTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS 180
Query: 253 DQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALST 312
GK I + A+N K V +G K+ ++ DA+ + V AF AGQ C A S
Sbjct: 181 TAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAAS- 239
Query: 313 VIFVGEAVEWLPELKKRAEALKVSAGNVPGTDL--------GPVIS-------PQAKERI 357
+ V E++ E ++ + V +V D+ GPV+ +A
Sbjct: 240 RLLVHESI--YDEFVEKLVTVLV---DVD-PDMPIAQEEIFGPVLPVIRFKDEEEAIALA 293
Query: 358 LSLI---QSGV---DEGATLLLDGRNLKVG---INVPIPVPLSMFSFTGSRGSFLGENHF 408
+GV D L + L+ G IN F G + S +G
Sbjct: 294 NDTEYGLTAGVFTRDLNRALRV-AERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREG- 351
Query: 409 YGKQGFYFYTETKTVT 424
G G YT TKTV
Sbjct: 352 -GPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 217 bits (556), Expect = 6e-66
Identities = 104/338 (30%), Positives = 171/338 (50%), Gaps = 12/338 (3%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
I++ +P EV+ RVP A+ ++E A+A+AK+ + R ++L R +++
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL-----AGVAKDMDIHS 161
++ A I E GK + DA +V R ++ + + GET+ G + +
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG-FT 119
Query: 162 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCP 221
R P+GV A ITPFNFP + AIA GN V+KP+ + P + + L ++L +AG P
Sbjct: 120 IREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLP 179
Query: 222 PGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHG 280
G +NV+ G+ + V + + P +R ISF GS G+ I + K+V +G+
Sbjct: 180 KGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAGL--KKVTLELGSNAAV 237
Query: 281 VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAG 338
++ +DA+ + + V AF AGQ C+++ IFV E + E+L + L V
Sbjct: 238 IVDADADLEKAVERCVSGAFANAGQVCISVQR-IFVHEDIYDEFLERFVAATKKLVVGDP 296
Query: 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
TD+GP+IS ERI ++ V+ GA LL G+
Sbjct: 297 LDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGK 334
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 3e-64
Identities = 113/336 (33%), Positives = 178/336 (52%), Gaps = 12/336 (3%)
Query: 48 DLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107
D NPA V RV + + E A+A+A A+ W+ T+ R+++L + I++
Sbjct: 2 DDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRAD 61
Query: 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLG 167
L + + +E G T A + +++ ++GETL + S R PLG
Sbjct: 62 DLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLG 121
Query: 168 VTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227
V AGITPFN+P ++ A+A GNT V+KPSE P + + +++ +AG P GV NV
Sbjct: 122 VVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNV 181
Query: 228 IHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
+ G V + + D P +R ++F GS G+ I E+ ++ K++ +G KN ++++DA
Sbjct: 182 VTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADA 241
Query: 287 NRSNTLNQLVG-AAFGA---AGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNV 340
+ L+ V AAFGA GQ CM+ S +I V E V E++ + RA LKV
Sbjct: 242 D----LDYAVRAAAFGAFMHQGQICMSASRII-VEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
P T +GP+ISP+ ERI ++ V +GA LL G+
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK 332
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 1e-63
Identities = 115/364 (31%), Positives = 177/364 (48%), Gaps = 36/364 (9%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSII 89
L+I G++V ++ ID+ +PAT EVV RVP+ATPA++++AVA+A++A++ W + S
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R VL RL + ++A +LA T E G ++ R Q P
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPIS-----WSRRAQG-----PGPA-ALLRY 109
Query: 150 LAGVAKDM------------DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197
A +A+D + R P+GV A I P+N P + A+A G T V
Sbjct: 110 YAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVV 169
Query: 198 IKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGK 257
+KPS P +L + +AG PPGVVNV+ + ++ HP + +SF GS AG+
Sbjct: 170 LKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGR 229
Query: 258 YIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVG 317
I + RV +G K+ +++ DA+ + LV A+ GQ C+AL+ ++
Sbjct: 230 RIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRIL--- 286
Query: 318 EAV------EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATL 371
V E + L ALKV P T +GP+ S + +ER+ I G EGA L
Sbjct: 287 --VPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARL 344
Query: 372 LLDG 375
+ G
Sbjct: 345 VTGG 348
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 1e-63
Identities = 121/356 (33%), Positives = 180/356 (50%), Gaps = 32/356 (8%)
Query: 32 LYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
L I G+ + ++ I NPA +EVV RV KAT E A+ +A +A+ETW K S
Sbjct: 39 LIIGGERITTEDK--IVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPED 96
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGL--------QVVEQCCSIP 142
R ++L R II+ + + + +E GK A+A+ D + Q+++ P
Sbjct: 97 RARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKP 156
Query: 143 TI-MQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201
GE + +PLGV I+P+NFP I M AI GNT ++KP+
Sbjct: 157 VESRPGE---------HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPA 207
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIY 260
P V++L +AG P GVVN + G+ V +++ DHP R I+F GS + G IY
Sbjct: 208 SDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY 267
Query: 261 ERGAK--NG----KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
ER AK G KRV + MG K+ V+ DA+ +V +AFG +GQ+C A S I
Sbjct: 268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAI 327
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEG 368
V E V E L ++ + + L V +GPVI+ + ++I+S I+ G +EG
Sbjct: 328 -VHEDVYDEVLEKVVELTKELTVGNPEDN-AYMGPVINQASFDKIMSYIEIGKEEG 381
|
Length = 514 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 7e-63
Identities = 116/363 (31%), Positives = 183/363 (50%), Gaps = 6/363 (1%)
Query: 25 RHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWS 84
+ T+ I GK+ ++ ++NPAT EV+ VP AE A+ASA A+ +WS
Sbjct: 20 AGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWS 79
Query: 85 KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTI 144
K + R ++L R ++I AN + LA+ +T EQGK L +A G+V G +E
Sbjct: 80 KLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKR 139
Query: 145 MQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSER 203
+ G+ + D + + P+GV ITP+NFP AMI + P A+A G T V+KPSE
Sbjct: 140 VYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGP-ALAAGCTVVVKPSEL 198
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ QAG PPGV+NV+ G + + + P +R I+F GS GK +
Sbjct: 199 TPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAG 258
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
A KRV +G ++ DA+ + + + F +GQ C+ + I V E +
Sbjct: 259 AAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVC-ANRILVQEGIYD 317
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
++ K + L V G G GP+I+ A +++ S +Q V +GA +LL G+ +
Sbjct: 318 KFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSL 377
Query: 381 GIN 383
G
Sbjct: 378 GGT 380
|
Length = 498 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 208 bits (533), Expect = 9e-63
Identities = 99/318 (31%), Positives = 169/318 (53%), Gaps = 15/318 (4%)
Query: 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD 127
+++ A A+A A + W+ T R +L + I++ ++A+ + E G T A +
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFE 60
Query: 128 VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187
V + ++ + +P +GE L + RVPLGV I+PFNFP ++ +
Sbjct: 61 VGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVA 120
Query: 188 VAIACGNTHVIKPSERDP--GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDI 244
A+A GN V+KP R P G +++ ++ +AG P GV+NV+ G + + + +HP +
Sbjct: 121 PALALGNAVVLKPDSRTPVTGG-LLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRV 179
Query: 245 RAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVG-AAFGA- 302
R ISF GS G++I E ++ K+V +G N +++ DA+ L+ V AAFGA
Sbjct: 180 RMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD----LDLAVSAAAFGAF 235
Query: 303 --AGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERIL 358
GQ CMA ++ V E+V E++ +L +A+AL V P T +GP+I+ + +R+
Sbjct: 236 LHQGQICMAAGRIL-VHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVH 294
Query: 359 SLIQSGVDEGATLLLDGR 376
++++ V GA LL G
Sbjct: 295 AIVEDAVAAGARLLTGGT 312
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 9e-63
Identities = 108/337 (32%), Positives = 178/337 (52%), Gaps = 8/337 (2%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
I++ NPA EV+ VP + E+ A+ A+KA + S R ++L ++ +I+
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL----AGVAKDMDIHSY 162
++LA+ +T E GK + + +V R +++ + +++GET+ + +
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120
Query: 163 RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPP 222
R P+GV ITPFNFPA + AIA GN+ V+KPS P + L +L +AG PP
Sbjct: 121 REPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPP 180
Query: 223 GVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281
GV+NV+ G V + I +P + ISF GS G I + GK+V +G + +
Sbjct: 181 GVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240
Query: 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGN 339
++ DA+ ++ V F AGQ C A+ ++ V E V ++L L ++ + LKV
Sbjct: 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRIL-VEEEVYDKFLKLLVEKVKKLKVGDPL 299
Query: 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
TDLGP+ISP+A ER+ +L+ V++G +L G+
Sbjct: 300 DESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK 336
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 1e-61
Identities = 108/359 (30%), Positives = 189/359 (52%), Gaps = 19/359 (5%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
+IDG+FV S++ + + +PATNEV+ V + A+++ A +AK+A++ W++
Sbjct: 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAE 61
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ----VVEQCCSIPTIMQ 146
R++ L ++ ++I+ + ++A + G+ L V+R + ++C M
Sbjct: 62 RKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKC---EEAMD 118
Query: 147 GETLAGVAKDMDIHSY---RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
G T +D H RVP+G ITP+N P M+ W A+A GNT V+KP+E
Sbjct: 119 GRTYP-----VDTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEW 173
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P L ++ +AG P GV N++HG +A + HPD++A+SF G G I
Sbjct: 174 SPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRN 233
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
GA KR +G K+ ++ DA+ L+ +V F G+RC A S+ + V E++
Sbjct: 234 GADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTA-SSRLLVQESIAE 292
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
+++ +L +R A++V P T++GP+I P+ ++L +++ EGAT+L+ G
Sbjct: 293 DFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAP 351
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 5e-61
Identities = 112/363 (30%), Positives = 182/363 (50%), Gaps = 24/363 (6%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET-WSKTSIIT 90
+IDG+ V ++ +D+ NPAT +V+ V AT A++++AVASA +A+ + W+KT+
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAE 61
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI--------P 142
R ++L RL ++I+ + ++LA+ T GK++ + R +V +
Sbjct: 62 RGRILLRLADLIEQHGEELAQLETLCSGKSIH-----LSRAFEV--GQSANFLRYFAGWA 114
Query: 143 TIMQGETLAGVAKDMDIHSY-----RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197
T + GETLA M Y R P+GV AGI P+NF MI +W A+A G T V
Sbjct: 115 TKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIV 174
Query: 198 IKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGK 257
IKPSE P + + ++ +AG P GV+NV++G + HPD+ +SF GS GK
Sbjct: 175 IKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGK 234
Query: 258 YIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVG 317
I + A + RV +G KN + DA+ + L+ A F GQ C A +V
Sbjct: 235 KIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVC-AAPERFYVH 293
Query: 318 EAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
+ E + +LK+ + +V + GP+ + +++ S + EG ++ G
Sbjct: 294 RSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGG 353
Query: 376 RNL 378
L
Sbjct: 354 EAL 356
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 5e-61
Identities = 107/367 (29%), Positives = 169/367 (46%), Gaps = 38/367 (10%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT-SII 89
K I+G++ ES I++++P EV+ VP + E+ A +A A W T +
Sbjct: 3 KYLINGEWKESSG-KTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLE 61
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R L + +++K N +++A + E GKTL DA +V R + + TI + +
Sbjct: 62 ERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRD-----TIEELKR 116
Query: 150 LAGVAKDMDIHS---------YRVPLGVTAGITPFNFP------AMIPLWMFPVAIACGN 194
L G + D R PLGV I PFN+P +IP A+ GN
Sbjct: 117 LDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIP------ALIMGN 170
Query: 195 THVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSD 253
T V KP+ + + L + AG P GVVNV+ G + + + H I ISF GS
Sbjct: 171 TVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGST 230
Query: 254 QAGKYIYERGAKNGKRVQSNM--GAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALS 311
+ G + K + + G K+ +++ DA+ ++V A +GQRC A+
Sbjct: 231 EVGNRL----KKQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIK 286
Query: 312 TVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGA 369
+ V E+V E + LK+ LKV G D+ P+I P++ + + LI V +GA
Sbjct: 287 -RVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGA 345
Query: 370 TLLLDGR 376
T+L G
Sbjct: 346 TVLNGGG 352
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 2e-60
Identities = 107/336 (31%), Positives = 171/336 (50%), Gaps = 12/336 (3%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
PAT EV+ V A +++ AV SAK A + WS TS + R ++L + ++++ ++A
Sbjct: 3 EPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIA 62
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSY----RVPL 166
T + GK + +A D+ +E + + GE + + S+ R PL
Sbjct: 63 RLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHV-----PLPGGSFAYTRREPL 117
Query: 167 GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226
GV AGI +N+P I W A+ACGN V KPS P ++L ++LT+AG P GV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
V+ G + +C+HPD+ +SF GS GK + AK K V +G K+ +I DA
Sbjct: 178 VVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDA 237
Query: 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTD 344
+ N +N + A F + GQ C T +FV ++ E+ L +R + +++ T
Sbjct: 238 DLENAVNGAMMANFLSQGQVCSN-GTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQ 296
Query: 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+G +IS + E++L I+S EGA +L G +
Sbjct: 297 MGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVP 332
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 2e-60
Identities = 108/330 (32%), Positives = 174/330 (52%), Gaps = 6/330 (1%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT E++ RV +A+ ++++AVA+A+ A+E WS R ++L+RL +I AN +LA
Sbjct: 3 NPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELA 62
Query: 111 ENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVT 169
+ + GK + A DV R ++GE + V ++ R P+GV
Sbjct: 63 RLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIP-VRGPFLNYTVREPVGVV 121
Query: 170 AGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
I P+NFP M W A+A GNT V+KP+E P + + + +++ +AG P GV+NV+
Sbjct: 122 GAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVT 181
Query: 230 G-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANR 288
G A + +HPD+ I+F GS G+ I + A N KRV +G K+ ++ +DA+
Sbjct: 182 GFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADADL 241
Query: 289 SNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLG 346
+ F GQ C A S ++ V E++ E+L A +L+ P T +G
Sbjct: 242 DAAVRAAATGIFYNQGQMCTAGSRLL-VHESIYDEFLERFTSLARSLRPGDPLDPKTQMG 300
Query: 347 PVISPQAKERILSLIQSGVDEGATLLLDGR 376
P++S +R+L + G +EGA LL G+
Sbjct: 301 PLVSQAQFDRVLDYVDVGREEGARLLTGGK 330
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 1e-59
Identities = 116/361 (32%), Positives = 191/361 (52%), Gaps = 13/361 (3%)
Query: 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTS 87
LYIDG +VE+ + + ++ NPAT EV+ V ATPA++E+AVASAK+ + W+ +
Sbjct: 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMT 64
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQ 146
+ R ++L R +I++ +LA T + GK + + D++ G V+E + ++
Sbjct: 65 AMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALE 124
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GE + +++ R PLGV AGI +N+P I W A+A GN + KPSE P
Sbjct: 125 GEQIPLRGGSF-VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPL 183
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
+ L ++ T+AG P GV NV+ G ++ +HPDI +SF G GK + A +
Sbjct: 184 TALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAA----FGAAGQRCMALSTVIFVGEAV-- 320
K V +G K+ ++ DA+ L++ A F ++GQ C T +FV +++
Sbjct: 244 LKEVTMELGGKSPLIVFDDAD----LDRAADIAMLANFYSSGQVCTN-GTRVFVQKSIKA 298
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+ L +R E +++ P T+ GP++S ++++L I+ G EGA LL G L
Sbjct: 299 AFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTE 358
Query: 381 G 381
G
Sbjct: 359 G 359
|
Length = 488 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 3e-59
Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 6/351 (1%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
+IDG++VE A ++ NPA EV+ V ATP ++E A+A+A++A W+ S + R
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERG 60
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLA 151
++L R ++I+ ++LA+ T + GKTL + D+ G V E + + GE +
Sbjct: 61 RILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIP 120
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
++ R PLGV GI +N+P I W A+A GN V KPSE P + +
Sbjct: 121 LGGPS-FAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
+++ +AG P GV NV+ G V + +HPD+ +SF G GK I A + K V
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHV 239
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVE--WLPELKK 328
+G K+ ++ DA+ + ++ + F +AGQ C T +FV + ++ +L L +
Sbjct: 240 TMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSN-GTRVFVHKKIKERFLARLVE 298
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
R E +K+ T++GP+IS ++++LS I+ G EGATL G +
Sbjct: 299 RTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPE 349
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 3e-58
Identities = 112/347 (32%), Positives = 180/347 (51%), Gaps = 9/347 (2%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT E++ VP E E+A+ +A +A++TW T+ R +L + N++ N LA
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDLA 62
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTA 170
IT E GK L +A+G++L +E + G+T+ D + + P+GV A
Sbjct: 63 RLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCA 122
Query: 171 GITPFNFP-AMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
ITP+NFP AMI A+A G T V+KP+E+ P + + L + QAG P GV+NVI
Sbjct: 123 AITPWNFPAAMITRKAGA-ALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVIT 181
Query: 230 GAHDAV---NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
G A N + P +R ISF GS GK + ++ A K+V +G ++ DA
Sbjct: 182 G-SRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240
Query: 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTD 344
+ + + + F AGQ C+ + ++V + + E+ +L + + LKV G G
Sbjct: 241 DLDQAVEGAMASKFRNAGQTCVC-ANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVT 299
Query: 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINVPIPVPLS 391
GP+I+ +A E++ I V++GA ++ G+ ++G N P LS
Sbjct: 300 QGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLS 346
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 4e-58
Identities = 104/332 (31%), Positives = 164/332 (49%), Gaps = 7/332 (2%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT + +P AT ++++AV +A++A+ W KT+ R + L + ++ ++LA
Sbjct: 3 NPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELA 62
Query: 111 ENITEEQGKTLADAE---GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLG 167
E + GK L +A DV + + ++D R P+G
Sbjct: 63 ELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVG 122
Query: 168 VTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227
V ITP+NFP ++ W A+A G T V+KPSE + L ++ +AG PPGV+NV
Sbjct: 123 VVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNV 182
Query: 228 IHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
+ G +A + HP I ISF GS G + + A++ K V +G K+ ++ DA
Sbjct: 183 VTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDA 242
Query: 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTD 344
+ + + F GQ C A S ++ V E++ +L L AEA++V G
Sbjct: 243 DLEKAVEWAMFGCFWNNGQICSATSRLL-VHESIADAFLERLATAAEAIRVGDPLEEGVR 301
Query: 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
LGP++S E++LS I G +EGA LL GR
Sbjct: 302 LGPLVSQAQYEKVLSFIARGKEEGARLLCGGR 333
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 5e-58
Identities = 101/332 (30%), Positives = 169/332 (50%), Gaps = 7/332 (2%)
Query: 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYET-WSKTSIITRQQVLFRLQNIIKANMK 107
+ +P+T EV R+ + A+++ AV +A++A+E+ W + S R ++L R+ +I+ +
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLG 167
+LA + + GK L A DV + E + GET+ + +++ R P G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIP-LGPGYFVYTVREPHG 119
Query: 168 VTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227
VT I P+N+P I A+A GN V+KP+E P + L ++ +AG P G +NV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 228 IHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
+ G +A + HP + ISF GS + G + A+N V +G K+ ++ +DA
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239
Query: 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTD 344
+ L +V A AGQ C A S ++ V ++ E L L +R AL+V G + D
Sbjct: 240 DLEAALPVVVNAIIQNAGQTCSAGSRLL-VHRSIYDEVLERLVERFRALRVGPG-LEDPD 297
Query: 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
LGP+IS + +R+ + GA ++ GR
Sbjct: 298 LGPLISAKQLDRVEGFVARARARGARIVAGGR 329
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 8e-57
Identities = 110/355 (30%), Positives = 186/355 (52%), Gaps = 14/355 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET-WSKTSI 88
T L+I+ +FV+S + I NP+T EV+ V A +++ AV +A+KA+E+ WSK +
Sbjct: 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTG 67
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTL-ADAEGDVLRGLQVVEQCCSIPTIMQG 147
R ++L +L ++++ N LA + GK ++A GD+ + V+ +QG
Sbjct: 68 EERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQG 127
Query: 148 ETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
+T+ +Y P GV I P+N+P + W A+A GNT VIKP+E P
Sbjct: 128 KTIPTSPNK---LAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTP 184
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV--NFICDHPDIRAISFVGSDQAGKYIYERG 263
+ + +++ +AG PPGVVN+I G + AV + + +HPD+ I+F GS G+ + +
Sbjct: 185 LSLLYFANLVKEAGFPPGVVNIIPG-YGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
A+N K V G K+ ++ DA+ + +GQ C A S I+V E++ +
Sbjct: 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSR-IYVQESIYDK 302
Query: 322 WLPELKKRA-EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
++ + + + KV + T +GP +S +R+LS I+ G EGA L+ G
Sbjct: 303 FVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGG 357
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 1e-56
Identities = 110/352 (31%), Positives = 178/352 (50%), Gaps = 12/352 (3%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-TWSKTSIITR 91
+I+G FVES T NP V+ RV +A AE+++AVA+A+ A + W K ++ R
Sbjct: 4 FINGAFVESGKT--FANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAER 61
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETL 150
+L+ + + I+ + GK + A D+ RG + E
Sbjct: 62 ADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF 121
Query: 151 AGVAKD-MDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207
D +Y R PLGV I+P+N P ++ W A+ACGNT V+KPSE PG
Sbjct: 122 EMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181
Query: 208 CMMLVDMLTQAGCPPGVVNVIH--GAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
+L +++ G P GV NV+H G A F+ HP + AI+F G + G I + A
Sbjct: 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD 241
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWL 323
K V +G KN ++ +D + + ++ +AF GQ C+ + ++V + ++
Sbjct: 242 GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLG-TERVYVERPIFDRFV 300
Query: 324 PELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
LK RAE+LK+ + P T++GP+IS + ++++LS V+EGAT++ G
Sbjct: 301 AALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGG 352
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 2e-56
Identities = 108/334 (32%), Positives = 177/334 (52%), Gaps = 12/334 (3%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIITRQQVLFRLQNIIKANMK 107
+PA VV R + T ++++AVA+A+KA++ W + S R VL ++ ++I+A +
Sbjct: 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61
Query: 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLG 167
+LA T E GK ++ A G++ + S+ + G++ + DM R P+G
Sbjct: 62 RLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIG 121
Query: 168 VTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227
V ITP+NFP +I P A+A G T V+KPSE G +ML ++L +AG P GVVN+
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181
Query: 228 IHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
+ G V + +HPD+ +SF GS + GK I A+N K+V +G KN ++ +DA
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241
Query: 287 NRSNTLNQLVGAAFGA---AGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVP 341
+ + FG AG+ C + S + V E++ ++ + R+ ++V P
Sbjct: 242 DLDAAAD---AVVFGVYFNAGECCNSGSR-LLVHESIADAFVAAVVARSRKVRVGDPLDP 297
Query: 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
T +G +I+ +I + +G EGATLLL G
Sbjct: 298 ETKVGAIINEAQLAKITDYVDAGRAEGATLLLGG 331
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 9e-56
Identities = 105/345 (30%), Positives = 177/345 (51%), Gaps = 7/345 (2%)
Query: 36 GKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVL 95
G++ + + ID+ NP T E + +P A+ +++ A +A A + W+ T R ++L
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 96 FRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAK 155
+ I++ ++ E + E G T A + + + + + P M+G L
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 156 DMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP--GACMMLVD 213
+ YR PLGV I+P+NFP + + A+A GN V+KP+ P G ++L
Sbjct: 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGG-LLLAK 179
Query: 214 MLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS 272
+ +AG P GV+NV+ GA + + +HP R ISF GS G++I E ++ K+V
Sbjct: 180 IFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVAL 239
Query: 273 NMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRA 330
+G N V++ DA+ +N V F GQ CMA++ +I V E V E++ + +R
Sbjct: 240 ELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRII-VHEDVYDEFVEKFVERV 298
Query: 331 EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
+AL + P T +GP+I+ + +L I+ V+EGATLL+ G
Sbjct: 299 KALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGG 343
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 190 bits (485), Expect = 1e-55
Identities = 106/341 (31%), Positives = 167/341 (48%), Gaps = 23/341 (6%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
+PAT E + VP A+ A++++AVA+A A+ +W +T+ R + L +L + I+ N ++LA
Sbjct: 3 DPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELA 62
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQ-------CCSIPTIMQGETLAGVAKDMDIHSY- 162
+ GK L D L G V+ ++ GE L G S
Sbjct: 63 ALESRNTGKPLHLVRDDELPG--AVDNFRFFAGAARTLEGPAAGEYLPGHT------SMI 114
Query: 163 -RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCP 221
R P+GV A I P+N+P M+ W A+A GNT V+KPSE P ++L + L P
Sbjct: 115 RREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAE-LAAEVLP 173
Query: 222 PGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHG 280
PGVVNV+ G + + + HP +R +S GS + GK + A KRV +G K
Sbjct: 174 PGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPV 233
Query: 281 VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAG 338
++ DA+ + + A + AGQ C A V V E+V E++ L + A++V
Sbjct: 234 IVFDDADLDAAVAGIATAGYYNAGQDCTAACRVY-VHESVYDEFVAALVEAVSAIRVGDP 292
Query: 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
+ T++GP+ S +ER+ + A +L GR +
Sbjct: 293 DDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAE 332
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 191 bits (486), Expect = 2e-55
Identities = 112/356 (31%), Positives = 170/356 (47%), Gaps = 23/356 (6%)
Query: 32 LYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
L I+G+ VE++ I NP +EVV V KA+ E A+ +A KA+E W KT
Sbjct: 35 LVINGERVETEN--KIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEE 92
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R +LF+ I++ + + + +E GK +A+ +V + +E Q L
Sbjct: 93 RAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYAR-----QMIEL 147
Query: 151 AGVAKDMDIHSYR-----VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
A P GVT I+P+NFP I + M I GN V+KP+E P
Sbjct: 148 AKGKPVNSREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAP 207
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
V++L +AG P GVV + G+ V +++ DHP I+F GS + G I+ER A
Sbjct: 208 VIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAA 267
Query: 265 K------NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
K + KRV + MG K+ ++ DA+ +AFG AGQ+C A S + V E
Sbjct: 268 KVQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAV-VHE 326
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
V E + + E+LKV + +GPVI ++ +I+ I+ G EG +
Sbjct: 327 KVYDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVS 382
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 5e-55
Identities = 106/342 (30%), Positives = 167/342 (48%), Gaps = 24/342 (7%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWS-KTSIITRQQVLFRLQNIIKANMKQ 108
NPAT EV+ P A A++++A+A+A++A++T T R + L +L ++A ++
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEE 61
Query: 109 LAENITEEQGKTLADAE--------GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIH 160
L + E G + A G + + + + L G +
Sbjct: 62 LRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSF-PWEFDLPVPALRGGPGRRVVR 120
Query: 161 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGC 220
R P+GV A ITP+NFP + L A+A GNT V+KP+ P + ++L +++ +
Sbjct: 121 --REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDL 178
Query: 221 PPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNH 279
P GVVNV+ G+ +AV + P + +SF GS G+ I + A KRV +G K+
Sbjct: 179 PAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSA 238
Query: 280 GVIMSDANRSNTLNQLVGAAFG----AAGQRCMALSTVIFVGEAV--EWLPELKKRAEAL 333
+++ DA+ L AA G AGQ C AL+T + V + E + L EAL
Sbjct: 239 NIVLDDAD----LAAAAPAAVGVCMHNAGQGC-ALTTRLLVPRSRYDEVVEALAAAFEAL 293
Query: 334 KVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
V PGT +GP+IS ++R+ I G DEGA L+ G
Sbjct: 294 PVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGG 335
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 7e-55
Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 10/337 (2%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
+D+HNP EV+ +VP A+ E A+A+A+ E R +L R +++K
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA----KDMDIHSY 162
++ A+ I E GK + DA +V R + + ++GE + A + +
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTI 120
Query: 163 RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPP 222
R P+GV ITPFNFP + AIA G V+KP+ + P + + L +L +AG P
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180
Query: 223 GVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281
GV+ V+ G + + +SF GS G+ + GKR+ +G +
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG--GKRIALELGGNAPVI 238
Query: 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGN 339
+ DA+ + L F AGQ C+++ I+V E + E++ + LKV
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQR-IYVHEELYDEFIEAFVAAVKKLKVGDPL 297
Query: 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
TD+GP+IS +A ER+ ++ V+ GA LL G
Sbjct: 298 DEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGE 334
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 8e-55
Identities = 110/345 (31%), Positives = 168/345 (48%), Gaps = 27/345 (7%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
+++ NP T EVV RV A P ++E A+A+A KA+ R +L ++
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI-PTIMQGETLAGVAKDMDIHS---- 161
++LAE I E GK + DA G+V R + + T + GE L +DI +
Sbjct: 61 EELAETIVLEAGKPIKDARGEVAR-AIDTFRIAAEEATRIYGEVL-----PLDISARGEG 114
Query: 162 -----YRVPLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPSERDPGACMMLVDM 214
R P+G + ITPFNFP + L V AIA G V+KP+ R P + ++L ++
Sbjct: 115 RQGLVRRFPIGPVSAITPFNFP--LNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEV 172
Query: 215 LTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNM 274
L + G P G +V+ + D + + I+ +SF GS G + R K K+V +
Sbjct: 173 LAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLEL 230
Query: 275 GAKNHGVIM-SDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAE 331
G N VI+ SDA+ +++ AF AGQ C+++ + V +V E+ L R +
Sbjct: 231 GG-NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQR-VLVHRSVYDEFKSRLVARVK 288
Query: 332 ALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
ALK TD+GP+IS ER+ + VD GA LL G+
Sbjct: 289 ALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK 333
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 189 bits (481), Expect = 8e-55
Identities = 116/359 (32%), Positives = 185/359 (51%), Gaps = 14/359 (3%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TW 83
I TK++I+ ++ +S + NPAT E + V + A+++ AV +A+ A++ W
Sbjct: 4 IKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPW 63
Query: 84 SKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIP 142
R ++L +L ++I+ + LA T + GK + + D+ ++V+
Sbjct: 64 RTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWA 123
Query: 143 TIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+ G+T + D D +Y P+GV I P+NFP ++ W A+ACGNT V+KP
Sbjct: 124 DKIHGKT---IPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKP 180
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYI 259
+E+ P + L ++ +AG PPGVVNV+ G A I HPDI ++F GS + GK I
Sbjct: 181 AEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLI 240
Query: 260 YERGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
+ K N KRV +G K+ ++ +DA+ + Q A F GQ C A S FV E
Sbjct: 241 QQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRT-FVQE 299
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
++ E++ +RA+ V P T+ GP I + ++IL LI+SG EGA L G
Sbjct: 300 SIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGG 358
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 3e-54
Identities = 106/348 (30%), Positives = 169/348 (48%), Gaps = 25/348 (7%)
Query: 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTS 87
TKL I+G+ V + ++NPAT EV+ + +A+ A++++AVA+A A+ WS+T+
Sbjct: 1 MQTKLLINGELVAGEGEKQ-PVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTT 59
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGK----TLAD---AEGDVLRGLQVVEQCCS 140
R + L +L + I+ N + A + GK L D A DV R +C
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 141 IPTIMQGETLAGVAKDMDIH-SY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197
GE L G H S R P+GV A I P+N+P M+ W A+A GNT V
Sbjct: 120 GKA--AGEYLEG-------HTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVV 170
Query: 198 IKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAG 256
+KPSE P + L ++ PPGV+NV+ G V + + HP +R +S GS G
Sbjct: 171 LKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATG 229
Query: 257 KYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFV 316
K++ A + KR +G K ++ DA+ + + + AGQ C A + I+
Sbjct: 230 KHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTA-ACRIYA 288
Query: 317 GEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362
+ + + +L LKV + T+LGP+IS ++R+ ++
Sbjct: 289 QRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVE 336
|
Length = 475 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 2e-53
Identities = 113/360 (31%), Positives = 187/360 (51%), Gaps = 9/360 (2%)
Query: 24 IRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET- 82
++ T L+I+G+FV+S + ++NP+T +++T++ +AT A+++ AV A A+ET
Sbjct: 1 GKYEQPTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETD 60
Query: 83 WS-KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKT-LADAEGDVLRGLQVVEQCCS 140
W K S R + L +L ++++ N+ LA + GKT DV
Sbjct: 61 WGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGG 120
Query: 141 IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+ G+ + K + ++ P+GV I P+NFP ++ W A+A GNT V+KP
Sbjct: 121 WADKIHGQVIETDIKKL-TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKP 179
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYI 259
SE P + + + ++ +AG PPGV+NV+ G N I H DI ++F GS G+ +
Sbjct: 180 SELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKV 239
Query: 260 YERGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
E AK N K+V +G K+ ++ DA+ + + F GQ C A + I+V E
Sbjct: 240 MEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCA-GSRIYVQE 298
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ +++ K++A+ LKV T GP +S ERI+S I+SG EGAT+ G+
Sbjct: 299 GIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGK 358
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 182 bits (465), Expect = 1e-52
Identities = 108/346 (31%), Positives = 173/346 (50%), Gaps = 32/346 (9%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMK 107
NPAT V+ V A+++ AVA+A++A+E WS+ S R+ VL RL ++I+A+
Sbjct: 7 INPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRD 66
Query: 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTI---------MQGETLAGVAKDMD 158
+LA T + GK ++DA + + T + GE A D
Sbjct: 67 ELALLETLDMGKPISDALAVDVPS--------AANTFRWYAEAIDKVYGEV-APTGPDAL 117
Query: 159 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA 218
R PLGV + P+NFP ++ W A+A GN+ V+KP+E+ P + L ++ +A
Sbjct: 118 ALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEA 177
Query: 219 GCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK-NGKRVQSNMGA 276
G P GV+NV+ G H A + H D+ A++F GS + G+ E + N KRV G
Sbjct: 178 GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGG 237
Query: 277 KNHGVIMSDANRSNTLNQLV-GAAFGA---AGQRCMALSTVIFVGEAV--EWLPELKKRA 330
K+ ++ +DA L+ AA G G+ C A S ++ V E++ E+L ++ A
Sbjct: 238 KSPNIVFADA---PDLDAAAEAAAAGIFWNQGEVCSAGSRLL-VHESIKDEFLEKVVAAA 293
Query: 331 EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
K P T +G ++S +++L I+SG EGA L+ G+
Sbjct: 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGK 339
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 6e-52
Identities = 96/325 (29%), Positives = 160/325 (49%), Gaps = 7/325 (2%)
Query: 56 EVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITE 115
V+ V A A+++ A A A A W+ T R VL R ++++ + ++A+ I
Sbjct: 2 AVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVR 61
Query: 116 EQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF 175
E G A +V + + + +PT QGE L + + + RVPLGV I+PF
Sbjct: 62 ESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSL-ARRVPLGVVGVISPF 120
Query: 176 NFPAMIPLWMFPVAIACGNTHVIKPSERDP--GACMMLVDMLTQAGCPPGVVNVIHGAHD 233
NFP ++ + A+A GN V+KP R P G +++ + +AG P GV++V+ G D
Sbjct: 121 NFPLILAMRSVAPALALGNAVVLKPDPRTPVSGG-VVIARLFEEAGLPAGVLHVLPGGAD 179
Query: 234 AVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLN 293
A + + P++ ISF GS G+ + E ++ K+V +G KN +++ DA+ +
Sbjct: 180 AGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAAS 239
Query: 294 QLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISP 351
AF GQ CMA + V E+V + +L +A+ L V LGP+I+
Sbjct: 240 NGAWGAFLHQGQICMA-AGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINA 298
Query: 352 QAKERILSLIQSGVDEGATLLLDGR 376
+ +R+ +++ V GA L G
Sbjct: 299 RQLDRVHAIVDDSVAAGARLEAGGT 323
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 2e-51
Identities = 106/356 (29%), Positives = 178/356 (50%), Gaps = 15/356 (4%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
L+I+G++V+ + + ID +NPA E ++ + AT A+++ AV +A++A++TW KT++
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAE 61
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGET 149
R +L ++ +II N + LA T + GK + + D+ + I E
Sbjct: 62 RANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGV--IRAEE- 118
Query: 150 LAGVAKDMDIHSY----RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G A +D + R P+GV I P+NFP ++ W A+A GNT VIKPS
Sbjct: 119 --GSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTS 176
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ + L ++ P GVVN++ G + ++ +HP + ++F GS + G+ + A
Sbjct: 177 LSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235
Query: 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EW 322
K +G K+ +I DAN L GQ C A S IFV E + E+
Sbjct: 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSR-IFVQEGIYDEF 294
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+ +LK++ E +KV P T +G ++ ++ILS + +EGA +L G L
Sbjct: 295 VAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRL 350
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 9e-51
Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 34/366 (9%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
+I+G++V ++ D +NP +V+ +P++T +++ AV +A +A++TW KTS+
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAE 61
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGK-----TLAD--AEGDVLRGLQVVEQCCSIPT 143
R +L ++ + I+ N++ LA T + GK AD D R V
Sbjct: 62 RANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGV-------- 113
Query: 144 IMQGETLAGVAKDMD-----IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVI 198
I E G ++D H + PLGV I P+NFP ++ W A+A GNT V+
Sbjct: 114 IRAQE---GSLSEIDEDTLSYH-FHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVL 169
Query: 199 KPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGK 257
KP+ + P + ++L++++ P GVVNV+ G +A + HP I ++F GS G+
Sbjct: 170 KPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGR 228
Query: 258 YIYERGAKNGKRVQSNMGAKNHGVIMSDA--NRSNTLNQLVGAAFGAA---GQRCMALST 312
I + A+N V +G K+ + DA + ++ G A G+ C S
Sbjct: 229 LIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSR 288
Query: 313 VIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGAT 370
V E++ E++ +R EA+KV P T +G +S E+ILS + G +EGA
Sbjct: 289 -ALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAE 347
Query: 371 LLLDGR 376
+L G
Sbjct: 348 VLTGGE 353
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 2e-50
Identities = 116/385 (30%), Positives = 187/385 (48%), Gaps = 19/385 (4%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +L+I G++ E I + NPAT E + +P AT ++++AV +A+KA++
Sbjct: 4 PVPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKG 63
Query: 83 --WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS 140
W++T+ R + L + I +LA+ T + GK L +A D+ E
Sbjct: 64 KDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYAD 123
Query: 141 IPTIMQGETLAGVAKDMD---IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197
+ + + A V+ M+ + + PLGV ITP+N+P ++ W A+A G T V
Sbjct: 124 LAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAV 183
Query: 198 IKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAG 256
+KPSE C+ L D+ + G PPGV+NV+ G +A + HP + I+F GS G
Sbjct: 184 LKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATG 243
Query: 257 KYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFV 316
+ I A+ K V +G K+ ++ D + + + F GQ C A S + V
Sbjct: 244 RKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRL-LV 302
Query: 317 GEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLD 374
E + E+L +L K A+ +K+S G LGPV+S E++L I + EGAT+L
Sbjct: 303 HERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCG 362
Query: 375 G---RNLKVGI----NVPIPVPLSM 392
G +LK G + V SM
Sbjct: 363 GKRPEHLKKGFFIEPTIITDVTTSM 387
|
Length = 503 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 6e-50
Identities = 93/325 (28%), Positives = 158/325 (48%), Gaps = 14/325 (4%)
Query: 70 ESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVL 129
+ AV +A A+ WSKT R+ +L + +++++ + E + EE G T A A +V
Sbjct: 3 DQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVD 62
Query: 130 RGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA 189
++ + S+ T + G ++ + P+GV GI P+N P ++
Sbjct: 63 LAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYP 122
Query: 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH----GAHDAVNFICDHPDIR 245
+A GNT V+K SE P ++ + +AG P GV+NV+ A + V + HP +R
Sbjct: 123 LAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVR 182
Query: 246 AISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQ 305
++F GS + G+ I E AK+ K V +G K +++ DA+ N + AF +GQ
Sbjct: 183 KVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQ 242
Query: 306 RCMALST-VIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362
CM ST I V E++ E++ +LK AE L LG ++S A +R+ L+
Sbjct: 243 ICM--STERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVKELVD 295
Query: 363 SGVDEGATLLLDGRNLKVGINVPIP 387
+ +GA L++ G + +P
Sbjct: 296 DALSKGAKLVVGGLADESPSGTSMP 320
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 175 bits (444), Expect = 1e-49
Identities = 108/371 (29%), Positives = 192/371 (51%), Gaps = 14/371 (3%)
Query: 17 MKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASA 76
FRQ + I+G+++++ + ID+ NPA + + VPK E +A+ +A
Sbjct: 6 STLFRQ--------QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAA 57
Query: 77 KKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVE 136
+A W + R +L R N++ + LA +T EQGK LA+A+G++ +E
Sbjct: 58 NRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIE 117
Query: 137 QCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNT 195
+ G+T+ G D + + P+GVTA ITP+NFP AMI P A+A G T
Sbjct: 118 WFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP-ALAAGCT 176
Query: 196 HVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQ 254
V+KP+ + P + + L ++ +AG P GV NV+ G+ AV + +P +R +SF GS +
Sbjct: 177 MVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTE 236
Query: 255 AGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ + E+ AK+ K+V +G ++ DA+ + + + F AGQ C+ + +
Sbjct: 237 IGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRL 295
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
+V + V + +L++ L + G G +GP+I +A ++ I +++GA ++
Sbjct: 296 YVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVV 355
Query: 373 LDGRNLKVGIN 383
G+ ++G N
Sbjct: 356 CGGKAHELGGN 366
|
Length = 482 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 2e-48
Identities = 100/343 (29%), Positives = 181/343 (52%), Gaps = 19/343 (5%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
+I+GK+V+ + NPAT EV+ V +A ++++AVA+A+ A+E+WS R
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVR 83
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG-ETL 150
+ L+R+ I+ + + A + + GK + ++ C IP + +
Sbjct: 84 ARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRD------------CDIPLVARHFYHH 131
Query: 151 AGVAK--DMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
AG A+ D ++ ++ P+GV I P+NFP ++ W A+A GNT V+KP+E P
Sbjct: 132 AGWAQLLDTELAGWK-PVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTA 190
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268
++ ++ +AG PPGV+N++ G + + +HP + ++F GS + G+ + A GK
Sbjct: 191 LLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGK 250
Query: 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPEL 326
++ +G K+ ++ DA+ + + +V A + GQ C A S ++ V E+V E + +L
Sbjct: 251 KLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLL-VQESVAEELIRKL 309
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGA 369
K+R L+V D+G ++ P +RI L++ G EGA
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGA 352
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 7e-48
Identities = 89/332 (26%), Positives = 151/332 (45%), Gaps = 11/332 (3%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
+P V+ P A+ + +A+ A+ A + W + R+ ++ R ++ AN ++
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG--VAKDMDIHSY--RVP 165
AE +T + G+ +A A G++ L+ SI E LA V + Y R P
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAE----EALADIRVPEKDGFERYIRREP 116
Query: 166 LGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVV 225
LGV I P+N+P + + A+ GN ++K S + P +AG P GV
Sbjct: 117 LGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVF 176
Query: 226 NVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285
V+H +H+ + P I +SF GS G+ I A +V +G K+ + D
Sbjct: 177 QVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236
Query: 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGT 343
A+ LV AF +GQ C ++ I+V E++ ++ + K+ P T
Sbjct: 237 ADLDAAAESLVDGAFFNSGQSCCSIER-IYVHESIYDAFVEAFVAVVKGYKLGDPLDPST 295
Query: 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
LGPV+S +A + + + I + +GA L+DG
Sbjct: 296 TLGPVVSARAADFVRAQIADAIAKGARALIDG 327
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 2e-47
Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 9/331 (2%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT +V+ VP++ A+++ AVA+AK A+ W+ T R ++L R+ + ++A ++LA
Sbjct: 3 NPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELA 62
Query: 111 ENITEEQGKTL-ADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVT 169
+ E G L A + + + ++GETL D+ ++ R PLGV
Sbjct: 63 RLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREPLGVV 121
Query: 170 AGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
I P+N P M+ A+ GNT V+K +E P A ++L ++L Q P GV+NVI
Sbjct: 122 GAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVIT 180
Query: 230 G-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANR 288
G + + DHPD+ ++F GS + GK IY A V +G K+ ++ DA+
Sbjct: 181 GYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDADL 240
Query: 289 SNTLNQLV-GAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDL 345
+ ++ + G F GQ C A S +FV E + +L +L + LK+ TD+
Sbjct: 241 DDAVDGAIAGMRFTRQGQSCTAGSR-LFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDI 299
Query: 346 GPVISPQAKERILSLIQSGVDE-GATLLLDG 375
G +IS + ++ I G+ GAT+L G
Sbjct: 300 GAIISEKQFAKVCGYIDLGLSTSGATVLRGG 330
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 2e-47
Identities = 96/317 (30%), Positives = 147/317 (46%), Gaps = 10/317 (3%)
Query: 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD 127
++++AVA+A+ A+ W+ S+ R +L R ++KAN ++LA I+ E GK L +A+ +
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTE 60
Query: 128 VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRV---PLGVTAGITPFNFPAMIPLW 184
V + I E A M + P GV A PFNFP +P
Sbjct: 61 V----AAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNG 116
Query: 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDI 244
A+ GNT V KPSE P ++V++ +AG PPGV+N++ G + + H I
Sbjct: 117 HIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGI 176
Query: 245 RAISFVGSDQAGKYIYERGAKN-GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAA 303
+ F GS G ++ + A GK + MG N V+ A+ +V +AF A
Sbjct: 177 DGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236
Query: 304 GQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLI 361
GQRC +I AV +L L + A+ L++ A + +GP+I A R L
Sbjct: 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQ 296
Query: 362 QSGVDEGATLLLDGRNL 378
Q + G LL L
Sbjct: 297 QDLLALGGEPLLAMERL 313
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 6e-47
Identities = 103/330 (31%), Positives = 172/330 (52%), Gaps = 7/330 (2%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT +V+ RVP A+ A+++ AVA+A+ A+ W T+ + R ++L L ++ + ++LA
Sbjct: 3 NPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELA 62
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTA 170
+ G ++ GDV+ +++ + T ++GET+ +++ ++ R P GV A
Sbjct: 63 LIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLH-YTLREPYGVVA 121
Query: 171 GITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG 230
I FN P M +A GNT V+KP E+ P + + L + L + PPGV N++ G
Sbjct: 122 RIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAE-LAREVLPPGVFNILPG 180
Query: 231 AHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRS 289
+ HPD++ I+ +GS G+ I A+ K V +G KN ++ DA+
Sbjct: 181 DGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADPE 240
Query: 290 NTLNQLV-GAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLG 346
+ V G F GQ C + S + FV E++ E L + +R A+KV P T +G
Sbjct: 241 AAADAAVAGMNFTWCGQSCGSTSRL-FVHESIYDEVLARVVERVAAIKVGDPTDPATTMG 299
Query: 347 PVISPQAKERILSLIQSGVDEGATLLLDGR 376
P++S Q +R++ I S EGA L+ G
Sbjct: 300 PLVSRQQYDRVMHYIDSAKREGARLVTGGG 329
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 168 bits (426), Expect = 6e-47
Identities = 100/361 (27%), Positives = 191/361 (52%), Gaps = 15/361 (4%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTS 87
+L+I+G+FV+++ + NP V+ +V AT +++ AVA+AK+A+E W K +
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 88 IITRQQVLFRLQNIIKANMKQLA--ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
R ++++RL ++++ + ++LA E++ TLA + V +Q +
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLA-LKTHVGMSIQTFRYFAGWCDKI 124
Query: 146 QGETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201
QG+T+ A +++ + + R P+GV + P+N+P M+ W +A GNT V+KP+
Sbjct: 125 QGKTIPINQARPNRNLTL-TKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPA 183
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIY 260
+ P + ++ +AG P GV+N++ G+ V + DHPD+R + F GS GK+I
Sbjct: 184 QVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243
Query: 261 ERGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA 319
+ A N K+V +G K+ +I +D + + + + F G+ C+A +FV E+
Sbjct: 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGR-LFVEES 302
Query: 320 V--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN 377
+ E++ + + + +K+ TD GP ++++ + GV EGATL+ G+
Sbjct: 303 IHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQ 362
Query: 378 L 378
+
Sbjct: 363 V 363
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 8e-47
Identities = 108/358 (30%), Positives = 180/358 (50%), Gaps = 13/358 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTS 87
TKL+I+G+FV++ + +P EV+ V + +++ AV +A+KA++ W + +
Sbjct: 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMT 63
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQ 146
R ++L R ++++ + +LA T + GK A +V ++ +
Sbjct: 64 GYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIH 123
Query: 147 GETLAGVAKDMDIHSYRV--PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204
G TL D H Y + P+GV I P+NFP ++ W A+ACGNT V+KP+E+
Sbjct: 124 GMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNF-ICDHPDIRAISFVGSDQAGKYIYERG 263
P + ++ + +AG P GV+N++ G I H D+ ++F GS + GK I +
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 264 AK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
AK N K V +G K+ ++ DA+ + A F GQ C A S FV E++
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRT-FVHESIYD 299
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
E++ + K RA V G + GP + + E+ILS I+ G +EGATL+ G +
Sbjct: 300 EFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRI 357
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 9e-46
Identities = 97/342 (28%), Positives = 161/342 (47%), Gaps = 31/342 (9%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMKQ 108
+PAT EV+ AE E+A+A+A++A++ W+ + R +VL L + +AN ++
Sbjct: 3 DPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDPRL-RARVLLELADAFEANAER 61
Query: 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHS------- 161
LA + E GK L +A ++ G +I + AG+A+
Sbjct: 62 LARLLALENGKILGEARFEI-SG--------AISEL---RYYAGLARTEAGRMIEPEPGS 109
Query: 162 ----YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQ 217
R P+GV I P+N P ++ + A+A G T V+KP+ + ++ +L +
Sbjct: 110 FSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAE 169
Query: 218 A-GCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMG 275
P GVVN+ + + + PD+ ISF GS G+ I A KR+ +G
Sbjct: 170 IPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELG 229
Query: 276 AKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEAL 333
K ++ DA+ L +L A AGQ CMA S V+ V ++ E L R A+
Sbjct: 230 GKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVL-VQRSIADEVRDRLAARLAAV 288
Query: 334 KVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
KV G P +D+GP+I +R+ +++ + GA ++L G
Sbjct: 289 KVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRG 330
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 5e-45
Identities = 105/340 (30%), Positives = 164/340 (48%), Gaps = 19/340 (5%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQ---VLFRLQNIIK 103
+++ NP T EVV VP T + A+A A S S +TR Q +L + +++
Sbjct: 1 LEVRNPYTGEVVGTVPAGTEEALREALALAA------SYRSTLTRYQRSAILNKAAALLE 54
Query: 104 ANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET----LAGVAKDMDI 159
A ++ A IT E G L D +V R V+ + GE+ L K I
Sbjct: 55 ARREEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKI 114
Query: 160 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG 219
+ R PLGV ITPFN P AIA N V+KPSE+ P + + L D+L +AG
Sbjct: 115 FTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAG 174
Query: 220 CPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKN 278
PP +++V+ G + + + HPD+ ++F G GK I KR +G +
Sbjct: 175 LPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGND 232
Query: 279 HGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVS 336
++M DA+ V ++ +GQRC A+ I V E+V E++ L +++ AL V
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKR-ILVHESVADEFVDLLVEKSAALVVG 291
Query: 337 AGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
P TD+G VI +A +I + ++ + +GA +LL +
Sbjct: 292 DPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQ 331
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 9e-45
Identities = 105/357 (29%), Positives = 189/357 (52%), Gaps = 9/357 (2%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWS 84
I TKL+I+G+FV++ + + +P T EV+ R+ + +++ AV +A++A++ W
Sbjct: 18 IKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWP 77
Query: 85 KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPT 143
+ S R +++ + ++I+ ++++LA T + GK A + D+ ++
Sbjct: 78 RMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAAD 137
Query: 144 IMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
+ GETL +++ + ++ + P+GV I P+NFP+ + A+A G T V+KP+E+
Sbjct: 138 KIHGETLK-MSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + + + AG P GV+NV+ G A I H D+ +SF GS + G+ I +
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 263 GAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I DA+ ++ + F G+ C+A S V +V E +
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRV-YVQEGIY 315
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E++ +L ++A+ V P GP + Q E+ILS I+ G EGATLL G+
Sbjct: 316 DEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK 372
|
Length = 501 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 9e-45
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 28/321 (8%)
Query: 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128
+E+A+ A A+ W KTS R +L +L ++++ +LA IT E GK +A+A +V
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEV 60
Query: 129 LRGLQVVEQCCSI--------PTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAM 180
E+C I + E + A + Y PLGV GI P+NFP
Sbjct: 61 -------EKCAWICRYYAENAEAFLADEPIETDAGKAYV-RYE-PLGVVLGIMPWNFP-- 109
Query: 181 IPLW-MFPVAIAC---GNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVN 236
W +F A GNT ++K + PG + + ++ +AG P GV + D V
Sbjct: 110 --FWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE 167
Query: 237 FICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLV 296
I P +R ++ GS++AG+ + KN K+ +G + +++ DA+ + V
Sbjct: 168 AIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAV 227
Query: 297 GAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAK 354
AGQ C+A + V E V E+L + + ALKV TDLGP+ +
Sbjct: 228 KGRLQNAGQSCIA-AKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLR 286
Query: 355 ERILSLIQSGVDEGATLLLDG 375
+ + ++ V GATLLL G
Sbjct: 287 DELHEQVEEAVAAGATLLLGG 307
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 2e-44
Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
NPAT EV+ VP PAE+ +AVA A+ A W+ + R Q L R + + + +L
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCS-IPTIMQGETLAG--VAKDMDIHSYRVPL 166
AE + E GK ADA +VL L+ ++ P ++ + + + P
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPY 120
Query: 167 GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226
GV I+P+N+P + P+ A+A GN V+KPSE P +L + AG P GV+
Sbjct: 121 GVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQ 180
Query: 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286
V+ G + D + ++F GS G+ + A+ V +G K+ ++++DA
Sbjct: 181 VVTGDGATGAALIDAG-VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA 239
Query: 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTD 344
+ V A AGQ C+++ ++V E+V E++ L +A AL+ A ++ D
Sbjct: 240 DLERAAAAAVWGAMVNAGQTCISVE-RVYVHESVYDEFVARLVAKARALRPGADDIGDAD 298
Query: 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+GP+ + + + + + V +GA L G G
Sbjct: 299 IGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGG 335
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 1e-43
Identities = 114/371 (30%), Positives = 183/371 (49%), Gaps = 17/371 (4%)
Query: 17 MKTFR-QFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVAS 75
++ + +F R L I G++V++K + A +EVV KA AE E+A+ +
Sbjct: 8 LRRVKEEFGRAYP---LVIGGEWVDTKERMVS-VSPFAPSEVVGTTAKADKAEAEAALEA 63
Query: 76 AKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVV 135
A A++TW R ++L + ++++ ++L +T E GK +A DV + +
Sbjct: 64 AWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFI 123
Query: 136 E--QCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACG 193
++ + + + S+ V LG I+P+NFP I M +A G
Sbjct: 124 RYYARAALRLRYPAVEVVPYPGEDN-ESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVG 182
Query: 194 NTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGS 252
NT + KP+E + ++ +AG PPGVV + G + V ++ +H IR I+F GS
Sbjct: 183 NTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGS 242
Query: 253 DQAGKYIYERGAKNG------KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306
+ GK IYE A+ KR+ G KN ++ A+ + +V +AFG GQ+
Sbjct: 243 LETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQK 302
Query: 307 CMALSTVIFVGEAVEWLPE-LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGV 365
C A S +I A E + E L KRAE L V GTDLGPVI + + ++LS I+ G
Sbjct: 303 CSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGK 362
Query: 366 DEGATLLLDGR 376
+EG L+L G+
Sbjct: 363 NEG-QLVLGGK 372
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 5e-43
Identities = 105/359 (29%), Positives = 185/359 (51%), Gaps = 17/359 (4%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTS 87
+L+I+G++ + + + +P T + ++ + +++ AV++A+ +E WS +S
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQ 146
R+ VL +L ++++A+ ++LA T + GK + + D+ + + +
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
GE +A + R P+GV A I P+NFP ++ W A+A GN+ ++KPSE+ P
Sbjct: 140 GE-VATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPL 198
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIY-ERGA 264
+ + L + +AG P GV+NV+ G H+A + H DI AI+F GS + GK + + G
Sbjct: 199 SAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGD 258
Query: 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAA----FGAAGQRCMALSTVIFVGEAV 320
N KRV G K+ ++ +D L Q A F GQ C+A T + + E++
Sbjct: 259 SNMKRVWLEAGGKSANIVFADC---PDLQQAASATAAGIFYNQGQVCIA-GTRLLLEESI 314
Query: 321 --EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN 377
E+L LK++A+ + P T +G +I + + S I+ G +G LLLDGRN
Sbjct: 315 ADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRN 372
|
Length = 494 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 154 bits (390), Expect = 2e-41
Identities = 116/372 (31%), Positives = 179/372 (48%), Gaps = 41/372 (11%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WS 84
++ T+L I+G+FV++ + +P T EV+ V + ++ AVA+A+KA++ W
Sbjct: 55 VSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWP 114
Query: 85 KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIP-T 143
K + R ++L R ++++ + +LA T + GK + +P
Sbjct: 115 KMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAK------------AELPMF 162
Query: 144 IMQGETLAGVAKDMDIHSYRV-------------PLGVTAGITPFNFPAMIPLWMFPVAI 190
AG A IH V P+GV I P+NFP ++ W A+
Sbjct: 163 ARLFRYYAGWAD--KIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 220
Query: 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISF 249
ACGNT V+K +E+ P + + +L +AG PPGV+NV+ G A + H D+ ++F
Sbjct: 221 ACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAF 280
Query: 250 VGSDQAGKYIYERGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCM 308
GS GK + E AK N K V +G K+ ++ DA+ + A F GQ C
Sbjct: 281 TGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCC 340
Query: 309 ALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVP---GTDLGPVISPQAKERILSLIQS 363
A S FV E V E++ K +A ALK G+ P G + GP I + E+IL I+S
Sbjct: 341 AGSRT-FVHERVYDEFVE--KAKARALKRVVGD-PFKKGVEQGPQIDSEQFEKILRYIKS 396
Query: 364 GVDEGATLLLDG 375
GV+ GATL G
Sbjct: 397 GVESGATLECGG 408
|
Length = 538 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 151 bits (385), Expect = 4e-41
Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 27/359 (7%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
DG++ + +PA E + RV +ATP + ES + +A++A++ W R
Sbjct: 2 VYDGEWGGGGGV--VTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRG 59
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG 152
+++ ++ + ++ + L + ++ E GK L + G+V + + + + + G T
Sbjct: 60 EIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLT--- 116
Query: 153 VAKDMDIHSYR---------VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
I S R PLGV IT FNFP + W +A+ CGN V KPS
Sbjct: 117 ------IPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPT 170
Query: 204 DP---GACMMLV-DMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYI 259
P A +V +L + G P + +++ G D + P + +SF GS G+ +
Sbjct: 171 TPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQV 230
Query: 260 YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA 319
+ A R +G N ++M DA+ + ++ AA G AGQRC +I V E+
Sbjct: 231 GQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLI-VHES 289
Query: 320 V--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ E L LKK + +++ GT +GP+ + A + L+ I+ +G T+L G+
Sbjct: 290 IYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGK 348
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-40
Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 50/376 (13%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
L+I+G ++ + + NP + EV+ + AT A++++AV +A+ A+ W++ S R
Sbjct: 3 LWINGDWIAGQGEA-FESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEER 61
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
Q ++ R +++ N ++LAE I E GK L +A +V T M +
Sbjct: 62 QAIVERFAALLEENKEELAEVIARETGKPLWEAATEV--------------TAMINKI-- 105
Query: 152 GVAKDMDIHSYRV-------------------PLGVTAGITPFNFPAMIPLWMFPVAIAC 192
+ I +Y P GV A P+NFP +P A+
Sbjct: 106 ----AISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 161
Query: 193 GNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGS 252
GNT V KPSE P + V + QAG P GV+N++ G + + HPDI + F GS
Sbjct: 162 GNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGS 221
Query: 253 DQAGKYIYERGAKN-GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALS 311
G ++ + A K + MG N VI A+ ++ ++ +AF +AGQRC +
Sbjct: 222 ANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTC-A 280
Query: 312 TVIFV-----GEAVEWLPELKKRAEALKVSAGNV-PGTDLGPVISPQAKERILSLIQSGV 365
+ V G+A L L A+ L V + P +G VIS QA + +++ +
Sbjct: 281 RRLLVPQGAQGDAF--LARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLL 338
Query: 366 DEGATLLLDGRNLKVG 381
G LL+ L+ G
Sbjct: 339 ALGGKSLLEMTQLQAG 354
|
Length = 487 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 3e-39
Identities = 99/342 (28%), Positives = 162/342 (47%), Gaps = 19/342 (5%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
KL I+G+ V + + ++NPAT EV+ + +A+ ++++AV +A A+ W +T+
Sbjct: 3 KLLINGELVSGEG-EKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKA 61
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTL-------ADAEGDVLRGLQVVEQCCSIPT 143
R + L +L ++I+ N + AE + GK L A DV R +C S
Sbjct: 62 RAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLS--G 119
Query: 144 IMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
+ GE L G + R PLGV A I P+N+P M+ W A+A GN V+KPSE
Sbjct: 120 LAAGEYLEGHTSMIR----RDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEI 175
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + L ++ P GVVN++ G + + H +R +S GS G++I
Sbjct: 176 TPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSH 234
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
A + KR +G K ++ DA+ + + F AGQ C A + I+ +
Sbjct: 235 TAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTA-ACRIYAQRGIYD 293
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362
+ +L LK A + T+LGP+ S ER++ ++
Sbjct: 294 TLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVE 335
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 2e-38
Identities = 98/351 (27%), Positives = 162/351 (46%), Gaps = 28/351 (7%)
Query: 34 IDGKFVESKATDWIDLHNPATNEVVT-RVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
I+G+ E+ + + +PA +E V A ++++A+A A A+ WS T + R
Sbjct: 37 INGEETET--GEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERA 94
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV------LR--GLQVVEQCCSIPTI 144
++L + ++++AN +L E GKTLADA+ +V R Q E
Sbjct: 95 EILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQAREL------- 147
Query: 145 MQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204
L G +++ GV I+P+NFP I A+A GNT + KP+E+
Sbjct: 148 FSDPELPGPTGELNGLELH-GRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQT 206
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYE-R 262
P V++L +AG P V+ ++ G + + + HP I + F GS + K I
Sbjct: 207 PLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRAL 266
Query: 263 GAKNGKRVQSN--MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV 320
++G + G KN ++ S A + +V +AFG+AGQRC AL + E
Sbjct: 267 AERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIA 326
Query: 321 E-WLPELKKRAEALKVSAGNV--PGTDLGPVISPQAKERILSLIQSGVDEG 368
E ++ LK +LKV G+ TD+GP+I A + + + + E
Sbjct: 327 ERFIEMLKGAMASLKV--GDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEA 375
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 7e-38
Identities = 94/347 (27%), Positives = 164/347 (47%), Gaps = 33/347 (9%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
++PAT + + VP TP +++ A+A+A+ A W+KTS R++VL L I N +++
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 110 AENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGE-TLAGVAKD----MDIHSYR 163
+ GKT+ DA G++L + + T+ GE L ++ M R
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRW-----TLKHGEKALRPESRPGGLLMFYKRAR 115
Query: 164 V---PLGVTAGITPFNFP------AMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDM 214
V PLGV I +N+P +I A+ GN V+K SE+ + + +
Sbjct: 116 VEYEPLGVVGAIVSWNYPFHNLLGPIIA------ALFAGNAIVVKVSEQVAWSSGFFLSI 169
Query: 215 LTQA----GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
+ + G P +V ++ + + HP I I+F+GS GK + A++ V
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPV 229
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKK 328
+G K+ +++ DA+ + ++ F ++GQ C+ + VI V E + + L L
Sbjct: 230 VLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVI-VHEKIYDKLLEILTD 288
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
R +AL+ D+G +ISP +R+ L+ V++GA LL G
Sbjct: 289 RVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGG 335
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-37
Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 16/359 (4%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
L+IDGK+ + + NPAT EV+ + A+ A++E+AVA+A+ A+ W++ S+ R
Sbjct: 1 LFIDGKWRAGQGESFSST-NPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEER 59
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ--GET 149
V+ R +++ + LA I E GK L + +V + + SI + GE+
Sbjct: 60 IAVVQRFAALLEERKEALARVIARETGKPLWETRTEV--ASMIGKVAISIKAYHERTGES 117
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + +R P GV A P+NFP +P A+ GNT V KPSE P
Sbjct: 118 ENPMPDGRAVLRHR-PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYER-GAKNGK 268
V + +AG P GV+N++ GA + + HPDI + F GS G ++ + + K
Sbjct: 177 ETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEK 236
Query: 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFV-----GEAVEWL 323
+ MG N ++ A+ ++ ++ +AF +AGQRC + + V G+A L
Sbjct: 237 ILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRC-TCARRLLVPDGAQGDAF--L 293
Query: 324 PELKKRAEALKVSAGNV-PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
L + AE L V A + P +G VIS QA +R+L+ + G LL R L G
Sbjct: 294 ARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPG 352
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 2e-37
Identities = 108/368 (29%), Positives = 175/368 (47%), Gaps = 36/368 (9%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTS 87
++L IDGK V A + NPAT EV+ AT A+M++A+A+A++A++ WS
Sbjct: 1 SRLLIDGKLVAGSAGTF-PTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWS-RD 58
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRG-LQVVEQCCSIPTIMQ 146
R + L +L++ ++A++++L E E G G L G + + +
Sbjct: 59 TALRVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYA 118
Query: 147 GETLAGVAKDMDIHSYRV----PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202
T GVA M I + R +GV ITP+NFP I L A+A GNT V+KP+
Sbjct: 119 WTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178
Query: 203 RDPGACMMLVDMLTQ-AGCPPGVVNVIHGAHDAVN-FICDHPDIRAISFVGSDQAGKYIY 260
P +L +++ + PPGVVN++ + + + P + +SF GS G+ +
Sbjct: 179 DTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVM 238
Query: 261 ERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGA---AGQRCMALSTVIFVG 317
A K+V +G K+ +++ DA+ + + AAF AGQ C A++T + V
Sbjct: 239 ADAAATLKKVFLELGGKSAFIVLDDADLAAACSM---AAFTVCMHAGQGC-AITTRLVVP 294
Query: 318 EAVEWLPELKKRAEALKVSAGNV----------PGTDLGPVISPQAKERILSLIQSGVDE 367
A + EA+ +A + PGT GPVIS + ++R+ S + V E
Sbjct: 295 RA--------RYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAE 346
Query: 368 GATLLLDG 375
G G
Sbjct: 347 GGRFACGG 354
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 6e-37
Identities = 93/344 (27%), Positives = 154/344 (44%), Gaps = 32/344 (9%)
Query: 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
P T E + +P++TPA++E+A A A+ A W+ R V R +++ +L
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 110 AENITEEQGKTLADAEGDVL--------------RGLQVVEQCCSIPTIMQGETLAGVAK 155
+ I E GK A +VL R L+ + +IP + +
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTV------ 114
Query: 156 DMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDML 215
R P GV I+P+N+P + + A+ GN V+KP + + V++L
Sbjct: 115 ------NRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELL 168
Query: 216 TQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNM 274
+AG P + V+ G V I D+ D + F GS G+ + ER + +
Sbjct: 169 IEAGLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAGRRLIGCSLEL 226
Query: 275 GAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEA 332
G KN +++ DA+ V A F AGQ C+++ I+V E+V E++ R A
Sbjct: 227 GGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIER-IYVHESVYDEFVRRFVARTRA 285
Query: 333 LKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
L++ A G D+G +IS +R+ + + V +GAT+L GR
Sbjct: 286 LRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR 329
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 3e-35
Identities = 104/364 (28%), Positives = 173/364 (47%), Gaps = 34/364 (9%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
+I G++V ++ D P T +V VP++T ++E A+ +A A E W KTS+ R
Sbjct: 4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERA 63
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-------DVLRGLQVV--EQCCSIPT 143
+L ++ + ++AN++ LA T + GK + + D R Q SI
Sbjct: 64 NILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISE 123
Query: 144 IMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
I T+A H + PLGV I P+NFP ++ W A+A GN V+KP+E+
Sbjct: 124 I-DENTVA-------YHFHE-PLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQ 174
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++L++++ PPGVVNV++G +A + I ++F G G+ I +
Sbjct: 175 TPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQY 233
Query: 263 GAKNGKRVQSNMGAKNHGV----IMS--DANRSNTLNQLVGAAFGAAGQRCMALSTVIFV 316
++N V +G K+ + +M DA L V A G+ C S + +
Sbjct: 234 ASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALN-QGEVCTCPSRAL-I 291
Query: 317 GEAV--EWLPELKKRAEALKVSAGNV--PGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
E++ ++ +R +A+K GN T +G S + E+ILS I G +EGA +L
Sbjct: 292 QESIYDRFMERALERVKAIK--QGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVL 349
Query: 373 LDGR 376
G
Sbjct: 350 TGGE 353
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 3e-35
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 13/290 (4%)
Query: 95 LFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA 154
L ++ I+ +++ I EE GK AE +V ++ +GE +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 155 KDMDIHSYRVPLGVTAGITPFNFPA-MIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD 213
+I ++ LGVT GI P+NFP +I M P A+ GNT VIKPSE P +
Sbjct: 61 PGENILLFKRALGVTTGILPWNFPFFLIARKMAP-ALLTGNTIVIKPSEFTPNNAIAFAK 119
Query: 214 MLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS 272
++ + G P GV N++ G + V + +P + +S GS AG+ I AKN +V
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCL 179
Query: 273 NMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRA 330
+G K ++M DA+ + +V + +GQ C V +V + + +++ L +
Sbjct: 180 ELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERV-YVQKGIYDQFVNRLGEAM 238
Query: 331 EALKVSAGNVPGT----DLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+A V GN P +GP+I+ A ER+ + V+EGA + L G+
Sbjct: 239 QA--VQFGN-PAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGK 285
|
Length = 409 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 1e-34
Identities = 96/353 (27%), Positives = 169/353 (47%), Gaps = 19/353 (5%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K Y DG++ S + + + NP+T + +V T E+ A+ SAK A + W+KT +
Sbjct: 17 KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWK 76
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS--IPTIMQGE 148
R ++L + I+K + +AE + +E K DA +V+R ++ + + +G+
Sbjct: 77 RAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGK 136
Query: 149 TLA-----GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
L G ++ + ++PLGV I PFN+P + + A+ GN V+KP +
Sbjct: 137 FLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQ 196
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
A + +V AG P G+++ + G + +F+ HP + ISF G D G I
Sbjct: 197 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGD-TGIAI--- 252
Query: 263 GAKNGKRV--QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV 320
+K V Q +G K+ +++ DA+ ++ F +GQRC A+ V+ +
Sbjct: 253 -SKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA 311
Query: 321 EWLPELKKRAEALKVSAGNVP--GTDLGPVISPQAKERILSLIQSGVDEGATL 371
+ L E K A+ K++ G P D+ PV+S + I L+ ++GAT
Sbjct: 312 DALVE-KVNAKVAKLTVG-PPEDDCDITPVVSESSANFIEGLVMDAKEKGATF 362
|
Length = 496 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 5e-34
Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 22/364 (6%)
Query: 24 IRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETW 83
IR A L I G+ V I++ P VV VPKA+ ++ A A A AY
Sbjct: 1 IRAEA---LRIAGEKVSRDRV--IEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR-- 52
Query: 84 SKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPT 143
+ R +L R ++ A +++++ IT E G + D+ +V R V+ +
Sbjct: 53 PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEAL 112
Query: 144 IMQGET----LAGVAKDMDIHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVI 198
G+ L K + + R PL GV + ITPFN P AIA N V+
Sbjct: 113 RDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVV 172
Query: 199 KPSERDPGACMMLVDMLTQAGCPPGVVNVIHG--AHDAVNFICDHPDIRAISFVGSDQAG 256
KPSE+ P + + L D+L +AG PP ++ V+ G A I +P + ++F G G
Sbjct: 173 KPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELIT-NPHVDLVTFTGGVAIG 231
Query: 257 KYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFV 316
KYI R +R +G + ++M DA+ + V ++ +GQRC A+ + V
Sbjct: 232 KYIAARAGY--RRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKR-MLV 288
Query: 317 GEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLL- 373
E+V + L ++ A + P D+G VI A + + + +GA LLL
Sbjct: 289 QESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLG 348
Query: 374 DGRN 377
+ R+
Sbjct: 349 NVRD 352
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 3e-33
Identities = 94/353 (26%), Positives = 159/353 (45%), Gaps = 28/353 (7%)
Query: 39 VESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRL 98
V+ A ++ P T E + VP +T A++E+A A A+ A W+ T + R VL R
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRF 85
Query: 99 QNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS-----IPTIMQGETLAGV 153
+++ N ++L + + E GK A +VL V P ++ AG
Sbjct: 86 HDLVLENREELLDLVQLETGKARRHAFEEVLD----VALTARYYARRAPKLLAPRRRAGA 141
Query: 154 AKDM-DIHSYRVPLGVTAGITPFNFPA------MIPLWMFPVAIACGNTHVIKPSERDPG 206
+ R P GV I+P+N+P IP A+ GN V+KP + P
Sbjct: 142 LPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIP------ALLAGNAVVLKPDSQTPL 195
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAK 265
+ V++L +AG P + V+ G V + D+ D + F GS G+ + E+ +
Sbjct: 196 TALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADY--LMFTGSTATGRVLAEQAGR 253
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWL 323
+G KN +++ DA+ V A F AGQ C+++ I+V E++ E++
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIER-IYVHESIYDEFV 312
Query: 324 PELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
A+++ AG D+G +IS E + + + V +GAT+L G+
Sbjct: 313 RAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGK 365
|
Length = 524 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 7e-33
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 17/346 (4%)
Query: 41 SKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQN 100
+ AT I + NPAT E ++ +P A ++E+A+ A + W +T+I R Q L +
Sbjct: 4 TPATHAISV-NPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGK 62
Query: 101 IIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI-PTIMQGE-TLAGVAKDMD 158
++A +++A+ IT E GK + A +V + + + P +++ E TL V
Sbjct: 63 ALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTL--VENQQA 120
Query: 159 IHSYRVPLGVTAGITPFNFPAMIPLWMF-----PVAIACGNTHVIKPSERDPGACMMLVD 213
+ YR PLG I P+NF PLW P+ +A GN +++K + G ++
Sbjct: 121 VIEYR-PLGTILAIMPWNF----PLWQVMRGAVPILLA-GNGYLLKHAPNVMGCAQLIAQ 174
Query: 214 MLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN 273
+ AG P GV ++ +D V+ + + I A++ GS +AG I + K+
Sbjct: 175 VFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLE 234
Query: 274 MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIF-VGEAVEWLPELKKRAEA 332
+G + ++++DA+ + V + GQ C A I G A + A A
Sbjct: 235 LGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAA 294
Query: 333 LKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
LK+ LGP+ ++ + +++ + EGA LLL G +
Sbjct: 295 LKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKI 340
|
Length = 462 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 2e-31
Identities = 100/319 (31%), Positives = 157/319 (49%), Gaps = 20/319 (6%)
Query: 51 NPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
NPA +++V V +AT A++E A+ +A A WS T R +L R ++++A M QL
Sbjct: 133 NPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQL 192
Query: 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVT 169
+ E GKTL++A +V + V+ AG A+D + PLG
Sbjct: 193 MGLLVREAGKTLSNAIAEVR---EAVDFL---------RYYAGQARDTFGNLTHRPLGPV 240
Query: 170 AGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
I+P+NFP I A+A GN+ + KP+E+ P V +L +AG PPGV+ ++
Sbjct: 241 VCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLP 300
Query: 230 GAHDAVN-FICDHPDIRAISFVGSDQAGKYIYERGAK-NGKRVQ--SNMGAKNHGVIMSD 285
G + V + + + F GS + + I + AK G+ + + G +N ++ S
Sbjct: 301 GRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSS 360
Query: 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVE--WLPELKKRAEALKVSAGNVPGT 343
A + ++ +AF +AGQRC AL V+ + E V L LK L+V + T
Sbjct: 361 ALAEQVVADVLASAFDSAGQRCSALR-VLCLQEDVADRILTMLKGAMAELRVGNPDRLTT 419
Query: 344 DLGPVISPQAKERILSLIQ 362
D+GPVI +AK I IQ
Sbjct: 420 DVGPVIDAEAKANIEKHIQ 438
|
Length = 769 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 125 bits (314), Expect = 3e-31
Identities = 91/319 (28%), Positives = 157/319 (49%), Gaps = 20/319 (6%)
Query: 51 NPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109
NPA ++V +V A A +++A+ SA++A+ TW+ T R L RL ++++ +M +L
Sbjct: 57 NPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPEL 116
Query: 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVT 169
E GKT+ +A +V + V+ C A +D+ GV
Sbjct: 117 MALCVREAGKTIHNAIAEVR---EAVDFC---------RYYAKQVRDVLGEFSVESRGVF 164
Query: 170 AGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
I+P+NFP I A+A GNT + KP+E+ V+++ +AG P G + ++
Sbjct: 165 VCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLP 224
Query: 230 GAHDAVN-FICDHPDIRAISFVGSDQAGKYIYERGAKNGK---RVQSNMGAKNHGVIMSD 285
G V + P I ++F GS + + I + A+ + + G +N ++ S
Sbjct: 225 GRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDST 284
Query: 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGT 343
A + ++ +AF +AGQRC AL V+ V E V L ++ + LKV ++ T
Sbjct: 285 ALPEQVVRDVLRSAFDSAGQRCSALR-VLCVQEDVADRVLTMIQGAMQELKVGVPHLLTT 343
Query: 344 DLGPVISPQAKERILSLIQ 362
D+GPVI +AK+ +L+ I+
Sbjct: 344 DVGPVIDAEAKQNLLAHIE 362
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 119 bits (302), Expect = 5e-29
Identities = 103/337 (30%), Positives = 162/337 (48%), Gaps = 31/337 (9%)
Query: 45 DWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIK 103
+ + +PA VV V A ++E A+A+A+ A+ WS+T + R +L R ++++
Sbjct: 562 EARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLE 621
Query: 104 ANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQC---CSIPTIMQGETLAGVAKDM--- 157
AN +L E GKTL DA +V R + V+ C Q L G + +
Sbjct: 622 ANRAELIALCVREAGKTLQDAIAEV-R--EAVDFCRYYA-----AQARRLFGAPEKLPGP 673
Query: 158 ---DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDM 214
GV I+P+NFP I L A+A GNT + KP+E+ P V +
Sbjct: 674 TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKL 733
Query: 215 LTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERG--AKNGKRVQ 271
L +AG P V+ ++ G V + P I ++F GS + + I R A++G V
Sbjct: 734 LHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARII-NRTLAARDGPIVP 792
Query: 272 --SNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELK 327
+ G +N ++ S A ++ +V +AF +AGQRC AL V+FV E + + LK
Sbjct: 793 LIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALR-VLFVQEDIADRVIEMLK 851
Query: 328 KRAEALKVSAGN--VPGTDLGPVISPQAKERILSLIQ 362
LKV G+ + TD+GPVI +AK + + I+
Sbjct: 852 GAMAELKV--GDPRLLSTDVGPVIDAEAKANLDAHIE 886
|
Length = 1038 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 5e-27
Identities = 95/350 (27%), Positives = 153/350 (43%), Gaps = 31/350 (8%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSK-TSIITRQQVLFRLQNIIKAN 105
+++ NP + + VP A ++ A+ +A + + R +L RL ++++
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEER 60
Query: 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDI------ 159
+LA I E GK L DA+ +V R + VE + L G M +
Sbjct: 61 ADELALLIAREGGKPLVDAKVEVTRAIDGVELA-----ADELGQLGGREIPMGLTPASAG 115
Query: 160 ---HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT 216
+ R P+GV I+ FN P + + AIA G ++KP+ P +C+ VD+L
Sbjct: 116 RIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLH 175
Query: 217 QAGCPPGVVN-VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMG 275
+AG P G V A + D P + SF+GS + G + + A G R
Sbjct: 176 EAGLPEGWCQAVPCENAVAEKLVTD-PRVAFFSFIGSARVGWMLRSKLAP-GTRC----- 228
Query: 276 AKNHG-----VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKK 328
A HG ++ A+ + LV F AGQ C+++ V FV + ++ L
Sbjct: 229 ALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRV-FVPAEIADDFAQRLAA 287
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
AE L V P T++GP+I P+ +R+ + V GA LL G+ L
Sbjct: 288 AAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL 337
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 8e-27
Identities = 89/336 (26%), Positives = 145/336 (43%), Gaps = 17/336 (5%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT E V T E+++A+A A + + T+ R + ++++A Q+A
Sbjct: 7 NPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVA 66
Query: 111 ENITEEQGKTLADAEGDVL---RGLQVVEQCCSIPTIMQGET--LAGVAKDMDIHSYRVP 165
+T E GKTLA A+ + L +G + + ++ E A V Y+ P
Sbjct: 67 ALMTLEMGKTLASAKAEALKCAKGFRYYAE--HAEALLADEPADAAAVGASRAYVRYQ-P 123
Query: 166 LGVTAGITPFNFPAMIPLWM---FPV-AIACGNTHVIKPSERDPGACMMLVDMLTQAGCP 221
LGV + P+NFP LW F A+ GN ++K + P + L D+ +AG P
Sbjct: 124 LGVVLAVMPWNFP----LWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFP 179
Query: 222 PGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281
G + AV I P + A + GS+ AG+ + K+ +G + +
Sbjct: 180 DGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFI 239
Query: 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL-KKRAEALKVSAGNV 340
+M A+ V A GQ C+A I + + E R AL+V
Sbjct: 240 VMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTD 299
Query: 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
P TD+GP+ + Q ++ + + V GAT+L G+
Sbjct: 300 PDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGK 335
|
Length = 457 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 4e-26
Identities = 99/338 (29%), Positives = 155/338 (45%), Gaps = 47/338 (13%)
Query: 48 DLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
+ NPA ++V V +ATPAE+E A+ SA A W T R +L R ++++A M
Sbjct: 662 PVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQM 721
Query: 107 KQLAENITEEQGKTLADAEGDV------LRGLQVVEQCCSIPTIMQGETLAG-VAKDMDI 159
+ L + E GKT ++A +V LR AG V D D
Sbjct: 722 QTLMGLLVREAGKTFSNAIAEVREAVDFLR------------------YYAGQVRDDFDN 763
Query: 160 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG 219
++R PLG I+P+NFP I A+A GN+ + KP+E+ P V +L +AG
Sbjct: 764 DTHR-PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAG 822
Query: 220 CPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKN-GKRVQSN---- 273
P GVV ++ G + V + +R + F GS + + + +N R+
Sbjct: 823 VPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLL----QRNLAGRLDPQGRPI 878
Query: 274 -----MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKK 328
G +N ++ S A + ++ +AF +AGQRC AL + + + ++ +
Sbjct: 879 PLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLR 938
Query: 329 RAEALKVSAGNVPG---TDLGPVISPQAKERILSLIQS 363
A A + GN P TD+GPVI +AK I IQ+
Sbjct: 939 GAMA-ECRMGN-PDRLSTDIGPVIDAEAKANIERHIQA 974
|
Length = 1318 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-24
Identities = 99/335 (29%), Positives = 154/335 (45%), Gaps = 48/335 (14%)
Query: 49 LHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107
+ NPA ++VV V +A+ ++E A+A+A+ A+ WS T R +L R ++++A+M
Sbjct: 571 VLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMP 630
Query: 108 QLAENITEEQGKTLADAEGDV------LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHS 161
+L E GKTLA+A +V LR A A+ +
Sbjct: 631 ELFALAVREAGKTLANAIAEVREAVDFLR------------------YYAAQARRLLNGP 672
Query: 162 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCP 221
PLG I+P+NFP I A+ GNT + KP+E+ P V +L +AG P
Sbjct: 673 GHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVP 732
Query: 222 PGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR---VQSNMGAK 277
+ ++ G V + P I + F GS + + I AK + + G +
Sbjct: 733 KDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQ 792
Query: 278 NHGVIMSDANRSNTL-NQLVGA----AFGAAGQRCMALSTVIFVGE--AVEWLPELKKRA 330
N ++ S A L Q+V AF +AGQRC AL V+ + E A L LK
Sbjct: 793 NAMIVDSSA-----LPEQVVADVIASAFDSAGQRCSALR-VLCLQEDVADRVLTMLKGAM 846
Query: 331 EALKVSAGNVP---GTDLGPVISPQAKERILSLIQ 362
+ L++ G+ P TD+GPVI +A+ I + I+
Sbjct: 847 DELRI--GD-PWRLSTDVGPVIDAEAQANIEAHIE 878
|
Length = 1208 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 1e-24
Identities = 93/374 (24%), Positives = 159/374 (42%), Gaps = 50/374 (13%)
Query: 32 LYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
L I GK V + T P V+ A A +E A+ +A +A + W++
Sbjct: 35 LVIGGKEVRTGNT--GKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFED 92
Query: 91 RQQVLFRLQNII--KANMKQLAENITEEQGKTLADAEGDV-------LR-GLQVVEQCCS 140
R + + +++ K + A + QGK + AE D LR ++ E+
Sbjct: 93 RAAIFLKAADLLSGKYRYELNAATMLG-QGKNVWQAEIDAACELIDFLRFNVKYAEE--- 148
Query: 141 IPTIMQGETLAGVAKDMDIHSYRVPL-GVTAGITPFNFPAM------IPLWMFPVAIACG 193
+ + L+ A + YR PL G ++PFNF A+ P M G
Sbjct: 149 ---LYAQQPLSSPAGVWNRLEYR-PLEGFVYAVSPFNFTAIGGNLAGAPALM-------G 197
Query: 194 NTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGS 252
N + KPS+ + ++ +L +AG PPGV+N + G V + + P + + F GS
Sbjct: 198 NVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGS 257
Query: 253 DQAGKYIYERGA------KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306
K ++++ + R+ G KN ++ A+ + + V AF GQ+
Sbjct: 258 TPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQK 317
Query: 307 CMALSTVIFVGEAVEWLPELKKR--AEALKVSAGNVP--GTDLGPVISPQAKERILSLI- 361
C A S +V E++ W PE+K+R E ++ G+ +G VI +A +RI I
Sbjct: 318 CSAASRA-YVPESL-W-PEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYID 374
Query: 362 QSGVDEGATLLLDG 375
+ D A ++ G
Sbjct: 375 HAKSDPEAEIIAGG 388
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 1e-22
Identities = 73/334 (21%), Positives = 134/334 (40%), Gaps = 39/334 (11%)
Query: 65 TPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGK----- 119
E++S + + + + + R L +L +K N + + E + ++ G+
Sbjct: 3 PLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFET 62
Query: 120 TLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRV---PLGVTAGITPFN 176
L + G L +++ + + E + R+ PLGV I P+N
Sbjct: 63 LLTEVSGVKNDILHMLKN---LKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWN 119
Query: 177 FPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVN 236
+P ++ L AIA G T V+KPSE P +L +++ + P V+ G
Sbjct: 120 YPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY-LDPDAFQVVQGGVPETT 178
Query: 237 FICDHP-DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQL 295
+ + D I + GS + G+ I E AK+ V +G K+ ++ +A+ ++
Sbjct: 179 ALLEQKFD--KIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRI 236
Query: 296 VGAAFGAAGQRCMALSTVI--------FVGEAVEWLPELKKRAEALKVSAGNVPGTDLGP 347
+ FG AGQ C+A V+ FV E + L E G D
Sbjct: 237 LWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPG--------GANASPDYTR 288
Query: 348 VISPQAKERILSLIQS--------GVDEGATLLL 373
+++P+ R+ SL+ + G + AT +
Sbjct: 289 IVNPRHFNRLKSLLDTTKGKVVIGGEMDEATRFI 322
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 99.1 bits (248), Expect = 2e-22
Identities = 34/48 (70%), Positives = 38/48 (79%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427
VGINVPIPVPL+ FSF G +GSF G+ HFYGK G FYT+TKTVT W
Sbjct: 431 VGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 99.1 bits (247), Expect = 2e-22
Identities = 79/344 (22%), Positives = 155/344 (45%), Gaps = 9/344 (2%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPA N+ + V +A+ + E + + ++A + W + R +++ ++ + ++A + L
Sbjct: 40 NPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLG 99
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTA 170
++ E GK LA+ G+V + + + + + G + + + PLG+
Sbjct: 100 RLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVG 159
Query: 171 GITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP----GACMMLVDMLTQAGCPPGVVN 226
IT FNFP + W +A+ CGN V K + P ++ ++L + P +
Sbjct: 160 VITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFT 219
Query: 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYER-GAKNGKRVQSNMGAKNHGVIMSD 285
G + I I +SF GS + G + + A+ GK + + N ++M D
Sbjct: 220 SFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLE-LSGNNAIIVMDD 278
Query: 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGT 343
A+ + ++ AA G AGQRC + + E++ + L +L + +K+ GT
Sbjct: 279 ADIQLAVRSVLFAAVGTAGQRCTTCRR-LLLHESIYDDVLEQLLTVYKQVKIGDPLEKGT 337
Query: 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINVPIP 387
LGP+ +P++K+ I+ +G +L G ++ N P
Sbjct: 338 LLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQP 381
|
Length = 508 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 97.7 bits (243), Expect = 4e-22
Identities = 85/330 (25%), Positives = 126/330 (38%), Gaps = 21/330 (6%)
Query: 70 ESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKT---LADAEG 126
E A+ +A + + + ++ R L R+ + A +A GK + G
Sbjct: 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENICG 61
Query: 127 DV--LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184
D LR V IP G L G H YR P G I FNFP IPL
Sbjct: 62 DQVQLRARAFVIYSYRIPHEP-GNHL-GQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLL 119
Query: 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG-CPPGVVNVIHGAHDAVNFICDHPD 243
A+A GN ++KP ++V +L AG PP V +I+G + + HP+
Sbjct: 120 QLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHPN 179
Query: 244 IRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTL-NQLVGAAFGA 302
+ + F GS + + + AK R+ + N V+ DA + + Q V
Sbjct: 180 PKMVLFTGSSRVAEKLALD-AKQA-RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC 237
Query: 303 AGQRCMALSTVIFVGEAVEWLPELKKRAEALKVSAGN--VPGTDLGPVISPQAKERILSL 360
+GQ+C A S ++FV E E LK + LGPV + I +
Sbjct: 238 SGQKCTAQS-MLFVPEN----WSKTPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHM 292
Query: 361 IQSGVDEGATLLLDGRNLKVGINVPIPVPL 390
G+ LL G+ LK I
Sbjct: 293 ---ENLLGSVLLFSGKELKNHSIPSIYGAC 319
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 1e-19
Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 22/311 (7%)
Query: 63 KATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLA 122
P + V K+++ T + R+Q L L +++ N ++ +E + ++ G+
Sbjct: 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPF 62
Query: 123 DAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIH-----SY--RVPLGVTAGITPF 175
+ + + L V E + + E L D SY PLGV I +
Sbjct: 63 ETKMTEV-LLTVAEIEHLLKHL--DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAW 119
Query: 176 NFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV 235
N+P + L AIA GNT V+KPSE P ++ +LT+ P V VI G +
Sbjct: 120 NYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEGGVEVT 178
Query: 236 NFICDHP-DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQ 294
+ P D I F GS + GK + + A+N +G K+ ++ N +
Sbjct: 179 TELLKEPFDH--IFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARR 236
Query: 295 LVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGT--DLGPVIS 350
+ F AGQ C+A V V ++ +++ LK EA+K G P D +++
Sbjct: 237 IAWGKFLNAGQTCVAPDYV-LVHRSIKDKFIEALK---EAIKEFFGEDPKKSEDYSRIVN 292
Query: 351 PQAKERILSLI 361
+R+ LI
Sbjct: 293 EFHTKRLAELI 303
|
Length = 493 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 4e-19
Identities = 84/350 (24%), Positives = 145/350 (41%), Gaps = 58/350 (16%)
Query: 47 IDLHNPATNE-VVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105
I +P ++ V+ + AT AV +A A + WS R + + +++
Sbjct: 48 IYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDRAAIFLKAADLLSGP 107
Query: 106 MKQLAENITE-EQGKTLADAEGDVLRGL------------QVVEQCCSIPTIMQGETLAG 152
+ T Q KT+ AE D + L ++ EQ Q + G
Sbjct: 108 YRAEILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARELYEQ--------QPISAPG 159
Query: 153 VAKDMDIHSYRVPL-GVTAGITPFNFPAM------IPLWMFPVAIACGNTHVIKPSERDP 205
+ YR PL G I+PFNF A+ P M GNT + KPS+
Sbjct: 160 EWNRTE---YR-PLEGFVYAISPFNFTAIAGNLAGAPALM-------GNTVIWKPSDTAM 208
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ +++ +L +AG PPGV+N + G V + + PD+ I F GS K+++++ A
Sbjct: 209 LSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVA 268
Query: 265 KN-GK-----RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
+N + R+ G K+ V+ A+ + ++ + AF GQ+C A S ++V
Sbjct: 269 QNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSR-LYVPH 327
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDL----GPVISPQAKERILSLIQ 362
++ + L +KV D G VI ++ +I+ I+
Sbjct: 328 SLWPRFKGRLLAELSRVKV----GDPDDFGTFMGAVIDEKSFAKIVKYIE 373
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 6e-19
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 379 KVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427
+VG+NVPIPVPL FSFTG + SF G++H YGKQG +FYT KTVT W
Sbjct: 429 QVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 83.7 bits (208), Expect = 2e-17
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 PLGVTAGITPFNFP---AMIPLWMFPV-AIACGNTHVIKPSERDPGACMMLVDMLTQAGC 220
PLGV I P+N+P A+ PL + AIA GNT V+KPSE P A L+ L
Sbjct: 100 PLGVVLIIGPWNYPLQLALAPL----IGAIAAGNTVVLKPSELAP-ATSALLAKLIPKYF 154
Query: 221 PPGVVNVIHGAHDAVNFICDHP-DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNH 279
P V V+ G + + P D I F GS GK + E AK+ V +G K+
Sbjct: 155 DPEAVAVVEGGVEVATALLAEPFDH--IFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSP 212
Query: 280 GVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSA 337
++ DAN ++ F AGQ C+A V V E++ E + ELKK A+K
Sbjct: 213 CIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYV-LVHESIKDELIEELKK---AIKEFY 268
Query: 338 GNVPG--TDLGPVISPQAKERILSLIQSG 364
G P D G +I+ + +R+ SL+ G
Sbjct: 269 GEDPKESPDYGRIINERHFDRLASLLDDG 297
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 73.6 bits (180), Expect = 5e-14
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Query: 379 KVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAA 438
++GINVPIPVPL FSFTG++ SF G+ +FYGK G F+T+ K VTQ ++ HS +
Sbjct: 542 QIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQKD---IHSPFS 598
Query: 439 VSMP 442
+++P
Sbjct: 599 LAIP 602
|
Length = 604 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 70.6 bits (174), Expect = 4e-13
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 162 YRVPLGVTAGITPFNFP---AMIPLWMFPV-AIACGNTHVIKPSERDPGACMMLVDMLTQ 217
Y P GV I P+N+P A+ PL + AIA GNT V+KPSE P ++ ++ +
Sbjct: 97 YYEPYGVVLIIAPWNYPFQLALAPL----IGAIAAGNTAVLKPSELTPNTSKVIAKIIEE 152
Query: 218 AGCPPGVVNVIHGAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN 273
V V+ G + + D+ I F GS + GK + E AK+ V
Sbjct: 153 T-FDEEYVAVVEGGVEENQELLDQKFDY-----IFFTGSVRVGKIVMEAAAKHLTPVTLE 206
Query: 274 MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAE 331
+G K+ ++ DAN ++V F AGQ C+A + V E+V +++ ELK+ +
Sbjct: 207 LGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVA-PDYVLVHESVKEKFIKELKEEIK 265
Query: 332 ALKVSAGNVP--GTDLGPVISPQAKERILSLIQSG 364
G P D G +I+ + +R+ L+ +G
Sbjct: 266 KFY---GEDPLESPDYGRIINEKHFDRLAGLLDNG 297
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 5e-13
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 12/217 (5%)
Query: 165 PLGVTAGITPFNFP---AMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCP 221
P GV I+P+N+P A PL AIA GNT ++KPSE P ++ ++ +A
Sbjct: 100 PKGVCLIISPWNYPFNLAFGPL---VSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FD 155
Query: 222 PGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281
V V G + + + P I F GS GK + AK+ V +G K+ +
Sbjct: 156 EDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTI 214
Query: 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKR-AEALKVSAG 338
+ A+ ++ F AGQ C+A V FV E+V ++ LK + A
Sbjct: 215 VDETADLKKAAKKIAWGKFLNAGQTCIAPDYV-FVHESVKDAFVEHLKAEIEKFYGKDAA 273
Query: 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
DL +++ + +R+ L+ V +GA + G
Sbjct: 274 RKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGG 310
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 5e-12
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 165 PLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPP 222
PLGV I+ +NFP L + PV AIA GN V+KPSE P +L ++ +
Sbjct: 101 PLGVVLVISAWNFP--FLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDT 157
Query: 223 GVVNVIHGAHDAVNFICDHP-DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281
+ VI G + + D I F GS + G+ I AK+ V +G K +
Sbjct: 158 KAIKVIEGGVPETTALLEQKWD--KIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVI 215
Query: 282 IMSDANRSNTLNQLVGAAFGA-AGQRCMA----LSTVIFVGEAVEWL-PELKK 328
+ S + + ++ G +G GQ C+A L F ++ L L+K
Sbjct: 216 VDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEK 268
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 1e-11
Identities = 66/276 (23%), Positives = 105/276 (38%), Gaps = 56/276 (20%)
Query: 70 ESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVL 129
++A A+A A+E++ S R L + + I+A +L E G A +G++
Sbjct: 2 DAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELG 61
Query: 130 RGLQVVEQCCSIPTIMQGETLAGVAKD--------------------MDIHSYRVPLGVT 169
R T Q A + ++ D+ VPLG
Sbjct: 62 R------------TTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPV 109
Query: 170 AGITPFNFP-AMIPLWMFPV-------AIACGNTHVIKPSERDPGACMMLVDMLTQA--- 218
A NFP A F V A+A G V+K PG ++ + A
Sbjct: 110 AVFGASNFPLA------FSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRA 163
Query: 219 -GCPPGVVNVIHGAHDAVNF-ICDHPDIRAISFVGSDQAGKYIYERGAK--NGKRVQSNM 274
G P GV +++ G V + HP I+A+ F GS + G+ +++ A + +
Sbjct: 164 TGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAEL 223
Query: 275 GAKNHGVIMSDA--NRSNTLNQ-LVGAAFGAAGQRC 307
G+ N I+ A R + Q VG+ AGQ C
Sbjct: 224 GSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFC 259
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 1e-10
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 12/233 (5%)
Query: 165 PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGV 224
PLGV I+ +N+P ++ + AI+ GN V+KPSE P + +L +L Q
Sbjct: 112 PLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQY-LDSSA 170
Query: 225 VNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284
V V+ GA + + I + GS + G+ I AK+ V +G K+ V+ S
Sbjct: 171 VRVVEGAVTETTALLEQ-KWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDS 229
Query: 285 DANRSNTLNQLVGAAFGA-AGQRCMALSTVIFVGE-AVEWLPELKKRAEALKVSAGNVPG 342
D + T+ +++ +G GQ C++ ++ E A + + +KK E +
Sbjct: 230 DTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETF-YGKNPMES 288
Query: 343 TDLGPVISPQAKERILSLIQSGVDEGATLLL-----DGRNLKVGINVPIPVPL 390
D+ +++ +R+ L+ E + ++ D NLK+ + + VPL
Sbjct: 289 KDMSRIVNSTHFDRLSKLLDE--KEVSDKIVYGGEKDRENLKIAPTILLDVPL 339
|
Length = 484 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 36/314 (11%)
Query: 70 ESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA---EG 126
AV A++A+ + + R Q L L +++ N ++ E + ++ K +A E
Sbjct: 1 AEAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEI 60
Query: 127 DVLRGLQVVEQCCSIPTIMQGETLAGVAKDM-----DIHSYRVPLGVTAGITPFNFPAMI 181
+++ ++ ++P M+ E V K++ D++ Y+ PLGV I +N+P +
Sbjct: 61 LLVKN-EIKYAISNLPEWMKPEP---VKKNLATLLDDVYIYKEPLGVVLIIGAWNYP--L 114
Query: 182 PLWMFPV--AIACGNTHVIKPSERDPGACMMLVDMLTQ---AGCPPGVVNVIHGAHDA-- 234
L + P+ AIA GN VIKPSE P +L +++ + C P VV G +
Sbjct: 115 QLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYP-VVL--GGVEETTE 171
Query: 235 -VNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLN 293
+ D+ I + GS GK + + AK+ V +G K+ + +
Sbjct: 172 LLKQRFDY-----IFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226
Query: 294 QLVGAAFGAAGQRCMALSTVIFVGEAVE-WLPELKKRAEALKVSAGNVPGT--DLGPVIS 350
++ F AGQ C+A V+ E E ++ LKK LK G P D G +I+
Sbjct: 227 RIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKK---TLKEFYGEDPKESPDYGRIIN 283
Query: 351 PQAKERILSLIQSG 364
+ +R+ L+ G
Sbjct: 284 DRHFQRLKKLLSGG 297
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 59.8 bits (146), Expect = 1e-09
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 37/225 (16%)
Query: 165 PLGVTAGITPFNFP---AMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCP 221
PLGV I P+N+P A+ PL A+A GN +IKPSE P +L ++L +
Sbjct: 101 PLGVVGIIVPWNYPLYLALGPL---IAALAAGNRVMIKPSEFTPRTSALLAELLAEYF-D 156
Query: 222 PGVVNVIHGAHD------AVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMG 275
V V+ G D ++ F DH + F GS G+++ A+N V +G
Sbjct: 157 EDEVAVVTGGADVAAAFSSLPF--DH-----LLFTGSTAVGRHVMRAAAENLTPVTLELG 209
Query: 276 AKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI--------FVGEAVEWLPELK 327
K+ +I DA+ + ++ AGQ C+A V+ FV A + ++
Sbjct: 210 GKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMY 269
Query: 328 KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
D +I+ + R+ L++ +GA ++
Sbjct: 270 PTLAD---------NPDYTSIINERHYARLQGLLEDARAKGARVI 305
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 165 PLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPP 222
PLGV + +NFP I L + P+ AIA GN V+KPSE P L + +
Sbjct: 108 PLGVVLIFSSWNFP--IGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDS 164
Query: 223 GVVNVIHGAHDAVNFICDHP-DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281
V VI G + H D I F GS + G+ I AK+ V +G K +
Sbjct: 165 KAVKVIEGGPAVGEQLLQHKWD--KIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCI 222
Query: 282 IMSDANRSNT---LNQLVGAAFGA-AGQRCMALSTVIFVGEAVEWLPELKK 328
+ S ++ +T +N++VG +G+ AGQ C+A+ V+ L EL K
Sbjct: 223 VDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLK 273
|
Length = 484 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 4e-09
Identities = 64/237 (27%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 160 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG 219
YR P G A ITPFNFP IP A+ GN ++K + + +L G
Sbjct: 137 SGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCG 196
Query: 220 CPPGVVNVIHGAHDAVNFICDHPDIRAISFVGS---------DQAGKYIYERGAKNGKRV 270
P V++IH +N I + R F GS + GK E + K +
Sbjct: 197 MPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELHGKVKLEDAGFDWKIL 256
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEW-----LPE 325
++ ++ D + A+ +GQ+C A S ++F E W L +
Sbjct: 257 GPDVSDVDYVAWQCDQD-----------AYACSGQKCSAQS-ILFAHE--NWVQAGILDK 302
Query: 326 LKKRAEALKVSAGNVPGTDL--GPVISPQAKERILSLIQSGVD-EGATLLLDGRNLK 379
LK AE K+ DL GPV++ ERIL + + GA +L G+ L
Sbjct: 303 LKALAEQRKLE-------DLTIGPVLT-WTTERILDHVDKLLAIPGAKVLFGGKPLT 351
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 77/360 (21%), Positives = 140/360 (38%), Gaps = 28/360 (7%)
Query: 40 ESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAK-KAYETWSKTSIITRQQVLFRL 98
+ + + + + +T EV+ RV + ++ +AVA A+ + R ++L L
Sbjct: 10 RTGQGEGVPVRDASTGEVLARV-TSEGLDVAAAVAWAREVGGPALRALTFHERARMLKAL 68
Query: 99 QNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS-----IPT---IMQGETL 150
+ + L + G T D D+ G+ + S +P I + E
Sbjct: 69 AQYLSERKEALYA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFE 127
Query: 151 AGVAKDMDI---HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207
++KD H GV I FNFP L F A G + KP+
Sbjct: 128 P-LSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYV 186
Query: 208 CMMLVDMLTQAG-CPPGVVNVIHGAHDAVNFICDHPDIR-AISFVGSDQAGKYIYERGAK 265
LV + ++G P G + +I G+ + DH D R ++F GS +
Sbjct: 187 AEALVRTMVESGLLPEGSLQLICGS---AGDLLDHLDHRDVVAFTGSAATADRLRAHPNV 243
Query: 266 NGKRVQSNMGAK--NHGVIMSDANRSNT-----LNQLVGAAFGAAGQRCMALSTVIFVGE 318
+ ++ N A N ++ DA ++V AGQ+C A+ VI
Sbjct: 244 LERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKA 303
Query: 319 AVEWLPE-LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN 377
+E + + L+ R + + G D+GP++S + + + + + + + GA + L G
Sbjct: 304 LLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPG 363
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 6e-08
Identities = 40/188 (21%), Positives = 60/188 (31%), Gaps = 17/188 (9%)
Query: 164 VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPG 223
P+GVT I P P IA N + +P P + +L QA
Sbjct: 99 FPIGVTMHILPSTNPLSGITSAL-RGIATRNQCIFRPHPSAP-FTNRALALLFQAADAAH 156
Query: 224 -----VVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKN 278
V+ V H + + + HP I I G A + V +
Sbjct: 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHS--PHIPVIGFGAGNS 214
Query: 279 HGVIMSDANRSNTLNQLVGAAF--GAAGQRCMALSTVIFVGEAVEWLPE---LKKRAEAL 333
V+ A+ + + F A C + + V + ++ L E LK E L
Sbjct: 215 PVVVDETADEERASGSVHDSKFFDQNA---CASEQNLYVVDDVLDPLYEEFKLKLVVEGL 271
Query: 334 KVSAGNVP 341
KV P
Sbjct: 272 KVPQETKP 279
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 9e-05
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 38/221 (17%)
Query: 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126
A ++ AVA+AK A + + K ++ R++++ ++ + +N ++LAE EE G + E
Sbjct: 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETG--MGRVED 61
Query: 127 DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMD--IHSY-RVPLGVTAGITPFNFPA---- 179
+ + E P E L A D + P GV ITP P
Sbjct: 62 KIAKNHLAAE---KTPGT---EDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETII 115
Query: 180 --MIPLWMFPVAIACGNTHVIKPSERDPGA---CMMLVDMLTQA----GCPPG-VVNVIH 229
I + +A GN V P PGA V+++ +A G P VV V
Sbjct: 116 NNSISM------LAAGNAVVFNPH---PGAKKVSAYAVELINKAIAEAGGPDNLVVTVEE 166
Query: 230 GAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
+ N + HPDI + G G + + +GK+
Sbjct: 167 PTIETTNELMAHPDINLLVVTG----GPAVVKAALSSGKKA 203
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 53/244 (21%), Positives = 89/244 (36%), Gaps = 84/244 (34%)
Query: 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQG-------- 118
A ++ AVA+AK A + + + S+ RQ+++ ++ + + ++LAE EE G
Sbjct: 36 ASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI 95
Query: 119 -KTLADAE--------------GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYR 163
K +A AE GD GL ++E
Sbjct: 96 AKNVAAAEKTPGVEDLTTEALTGD--NGLTLIE--------------------------Y 127
Query: 164 VPLGVTAGITPFNFPA---------MIPLWMFPVAIACGNTHVIKPSERDPGA---CMML 211
P GV +TP P M +A GN+ V P PGA +
Sbjct: 128 APFGVIGAVTPSTNPTETIINNAISM---------LAAGNSVVFSPH---PGAKKVSLRA 175
Query: 212 VDMLTQA----GCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
+++L +A G P +V + + + HP I + G G + + K+
Sbjct: 176 IELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTG----GPAVVKAAMKS 231
Query: 267 GKRV 270
GK+
Sbjct: 232 GKKA 235
|
Length = 465 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423
V IN F G + S G GK+G YTETKTV
Sbjct: 418 VWINDYTTGDPEALPFGGFKQSGFG--REGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
Query: 369 ATLLLDGRNLKVG---INVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424
A R L+ G IN ++ F G + S LG GK G +TE KTVT
Sbjct: 409 ARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG--REGGKYGLEEFTEVKTVT 466
Query: 425 QLWRE 429
Sbjct: 467 IKLGP 471
|
Length = 472 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| KOG2451|consensus | 503 | 100.0 | ||
| KOG2450|consensus | 501 | 100.0 | ||
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| KOG2454|consensus | 583 | 100.0 | ||
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| KOG2452|consensus | 881 | 100.0 | ||
| KOG2456|consensus | 477 | 100.0 | ||
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| KOG2453|consensus | 507 | 100.0 | ||
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2455|consensus | 561 | 100.0 | ||
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.97 | |
| KOG4165|consensus | 433 | 99.91 | ||
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.59 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.68 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.47 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 95.66 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 92.76 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 90.48 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 90.1 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 85.04 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 83.98 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 83.13 |
| >KOG2451|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-93 Score=675.97 Aligned_cols=394 Identities=29% Similarity=0.475 Sum_probs=377.9
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
+.+.||+|+|+.+.++++|+|.||++||+|+.++..+.+|.++||++|.+||++|+.++..+|.++|+++.++|.+|.|+
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|.|||+.||++||..+..+++||++.+++..|+..++..++....+.++|+||+++|+|||||.....+|+.+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999887778888999999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC----hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA----HDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~----~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
||++||+||+||+++||++++.++++..+||+|+|++|+|+++ .+.++.|+.+|.|++|+|||||.+|+.++++++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa 262 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA 262 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999963 468899999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
.++|++.|||||+.|+||++|||||.|++.....+|.|+||.|.+..|+ +||+ +|+|+.+|.++++++++||+++++
T Consensus 263 stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~-yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~ 341 (503)
T KOG2451|consen 263 STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRV-YVHDSIYDKFVSKLAEAVKKLKVGDGLDPG 341 (503)
T ss_pred hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEeccee-EEehhhHHHHHHHHHHHHHheeccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 8888 799999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------- 379 (445)
+..||||++.+.++++.+++||+++||++++||+...
T Consensus 342 tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi 421 (503)
T KOG2451|consen 342 TTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVI 421 (503)
T ss_pred CccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHH
Confidence 9999999999999999999999999999999998311
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|.+|.... ++...||||+|+||+| ||+|++|+++|+..|++.+.
T Consensus 422 ~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNegli-s~~~~pFGGVKeSG~G--REgskyGidey~~ik~icig 498 (503)
T KOG2451|consen 422 EWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLI-SDAEAPFGGVKESGFG--REGSKYGIDEYLVIKYICIG 498 (503)
T ss_pred HHhccCccceeeEEeccCHHHHHHHHHHHhcceeeccccee-cccccCcCCccccccC--ccccccchhhhhhhheeeec
Confidence 89997653 4578999999999999 66999999999999998764
|
|
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-91 Score=695.25 Aligned_cols=396 Identities=34% Similarity=0.506 Sum_probs=376.0
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..+||||+|+++.++++++++||+||+++++|+.++.+||+.|+++|++||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 4899999999999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|+.+.+.+.|||+.+++ .++..+++.++||+++++...+...+ .......++.++|+|||+.|.|||||+.+..||+
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~-~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIP-TDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCC-CCCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999999 79999999999999999887666555 4456678999999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
+|||++||+||+||+++||+|+..+++++.++|+|+||+|+|+| +..++.+|.+|++|++|+||||+.+|+.|++++++
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~ 259 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE 259 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence 99999999999999999999999999999999999999999999 78899999999999999999999999999999885
Q ss_pred -CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHh-ccccCCCCC
Q psy10608 266 -NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEA-LKVSAGNVP 341 (445)
Q Consensus 266 -~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~-l~vG~p~~~ 341 (445)
++|+++||||||+|.||++|||+|.|++.+..+.|+|+||.|++.+|+ +||+ +|+|+++++++..+ +++|||+++
T Consensus 260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~-~Vqe~iydefv~~~v~~a~~~~kvGdP~~~ 338 (501)
T KOG2450|consen 260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRV-FVQESIYDEFVEKFVAAAKKKLKVGDPFDE 338 (501)
T ss_pred cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCcee-EEechHHHHHHHHHHHHHhcccccCCCCCc
Confidence 699999999999999999999999999999999999999999999999 8888 69999999999966 999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++.+||++++.|+++|+.||+.++++||++++||.+..
T Consensus 339 ~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i 418 (501)
T KOG2450|consen 339 GTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVI 418 (501)
T ss_pred ccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHH
Confidence 99999999999999999999999999999999996521
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||++... +..+||||+|+||+| |+.|.++++.||+.|+++++
T Consensus 419 ~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~-~~~~PfgG~K~SG~G--RE~g~~~l~~ytevKtv~v~ 495 (501)
T KOG2450|consen 419 ERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVF-DAQVPFGGFKMSGIG--RELGEYGLEAYTEVKTVTVK 495 (501)
T ss_pred HHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccc-cccCCccccccccCC--ccccHHHHhhcceeeEEEEe
Confidence 999998765 488999999999999 67999999999999999988
Q ss_pred cccc
Q psy10608 427 WRES 430 (445)
Q Consensus 427 ~~~~ 430 (445)
..++
T Consensus 496 ~~~~ 499 (501)
T KOG2450|consen 496 LPQK 499 (501)
T ss_pred CCCC
Confidence 7553
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-88 Score=707.89 Aligned_cols=399 Identities=58% Similarity=0.967 Sum_probs=369.4
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++++
T Consensus 112 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ 191 (604)
T PLN02419 112 PRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMD 191 (604)
T ss_pred cccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 34578999999987667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||+.+++.||..+++.++||++.+....++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 192 ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~ia 271 (604)
T PLN02419 192 KLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFP 271 (604)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999887666555443222344567899999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+.+.++.|+.|++|++|+||||+++|+.|++++++++
T Consensus 272 pALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~l 351 (604)
T PLN02419 272 VAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKG 351 (604)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999997778899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc-cchHHHHHHHHHHhccccCCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE-AVEWLPELKKRAEALKVSAGNVPGTDLG 346 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~-~~~f~~~l~~~~~~l~vG~p~~~~~~~G 346 (445)
+|++||||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.|++++||
T Consensus 352 k~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv-~V~~~~d~f~e~l~~~~~~l~vG~p~d~~t~~G 430 (604)
T PLN02419 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSWEDKLVERAKALKVTCGSEPDADLG 430 (604)
T ss_pred CcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEE-EEeCcHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999 6666 7999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e----------------------------------------
Q psy10608 347 PVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K---------------------------------------- 379 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~---------------------------------------- 379 (445)
||+++++++++.++|++|+++||++++||... .
T Consensus 431 Plis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~ 510 (604)
T PLN02419 431 PVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAIS 510 (604)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHH
Confidence 99999999999999999999999999998521 0
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||+......+.+||||+|+||+|+++++|++|+++|++.|+|++..
T Consensus 511 laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 511 IINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 999986433346789999999999954469999999999999998765
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=691.17 Aligned_cols=392 Identities=29% Similarity=0.470 Sum_probs=364.8
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|+
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLA 91 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 58999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||+.+++.|+..+++.++|++..++...++..+....+...+++++|+|||++|+|||||+.+.++++++||
T Consensus 92 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (482)
T PRK11241 92 RLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPAL 171 (482)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHH
Confidence 99999999999999999999999999999877665554433222344567899999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCc
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 269 (445)
++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ .+.++.|+.||++++|+||||+++|+.|++.++++++|
T Consensus 172 aaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~ 251 (482)
T PRK11241 172 AAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKK 251 (482)
T ss_pred HhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999994 67789999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCC
Q psy10608 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGP 347 (445)
Q Consensus 270 ~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gp 347 (445)
+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||
T Consensus 252 ~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri-~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gp 330 (482)
T PRK11241 252 VSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRL-YVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGP 330 (482)
T ss_pred EEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEE-EEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999 7777 69999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e---------------------------------------------
Q psy10608 348 VISPQAKERILSLIQSGVDEGATLLLDGRNL---K--------------------------------------------- 379 (445)
Q Consensus 348 li~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~--------------------------------------------- 379 (445)
|+++.+++++.++|++|+++||++++||... .
T Consensus 331 li~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s 410 (482)
T PRK11241 331 LIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDT 410 (482)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCC
Confidence 9999999999999999999999999998531 0
Q ss_pred ---------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||++... .+.+||||+|+||+| +++|++|+++||+.|++++.
T Consensus 411 ~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 411 EFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS-NEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred CCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCC-CCCCCcCCccccccC--cccHHHHHHHhhcceEEEEe
Confidence 999986543 356899999999999 67999999999999999753
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-86 Score=681.77 Aligned_cols=390 Identities=38% Similarity=0.595 Sum_probs=365.0
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||+|+|+...+ +++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++|+++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6799999998765 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||+.+++.|+..+++.++||++.++.+.+...+ ...+...++.++|+|||++|+|||||+.+.+|+++|||
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL 158 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIP-TDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL 158 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccC-CCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence 99999999999999999999999999999998877766544 22267789999999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCc
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 269 (445)
++||+||+|||+.||+++..+++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+++|+.|++.+++++||
T Consensus 159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~ 238 (472)
T COG1012 159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP 238 (472)
T ss_pred HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence 9999999999999999999999999999999999999999 566889999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHh-ccccCCCCCCCCCC
Q psy10608 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEA-LKVSAGNVPGTDLG 346 (445)
Q Consensus 270 ~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~-l~vG~p~~~~~~~G 346 (445)
+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|+ +||+ +|+|+++|.++ ++ +++||+.|+.|++|
T Consensus 239 ~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~-~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~G 316 (472)
T COG1012 239 VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRL-IVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLG 316 (472)
T ss_pred EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEE-EEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999 7777 69999999999 66 99999889999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc----ce-------------------------------------------
Q psy10608 347 PVISPQAKERILSLIQSGVDEGATLLLDGRN----LK------------------------------------------- 379 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~----~~------------------------------------------- 379 (445)
|||+++++++++++|++++++|++++.||.. +.
T Consensus 317 pli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~ 396 (472)
T COG1012 317 PLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTE 396 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCC
Confidence 9999999999999999999999999998841 10
Q ss_pred --------------------------EEEeCCCC-CCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------VGINVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------V~iN~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||.... .....+||||+|+||+| +++|.+++++|++.|+++..+
T Consensus 397 yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G--~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 397 YGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG--REGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred CCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC--ccchHHHHHHHhcceEEEEec
Confidence 99998743 34467899999999999 679999999999999998765
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-84 Score=677.29 Aligned_cols=397 Identities=22% Similarity=0.353 Sum_probs=366.4
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
+.++.++||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|+++
T Consensus 17 ~~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
T PLN02315 17 SSRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAK 94 (508)
T ss_pred CccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhH
Confidence 5567789999999854 56799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+++|++++++|+|||+.+++.|+..+++.++||++.++.+.+...+....+...+..++|+|||++|+|||||+.+++++
T Consensus 95 ~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 174 (508)
T PLN02315 95 LDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWN 174 (508)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999998776665554442223344577899999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHH----HHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMM----LVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~----l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
+++||++||+||+|||+.+|.++.. +.++|.++|+|+|++|+++|+.+.+..|+.||++++|+||||+++|+.|++
T Consensus 175 ~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~ 254 (508)
T PLN02315 175 ACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQ 254 (508)
T ss_pred HhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999887 678889999999999999997778899999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 262 ~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
.++.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.
T Consensus 255 ~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~vG~p~ 333 (508)
T PLN02315 255 TVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRL-LLHESIYDDVLEQLLTVYKQVKIGDPL 333 (508)
T ss_pred HHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEE-EEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------- 379 (445)
++++.+|||++..+++++.+++++++++||++++||....
T Consensus 334 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~dea 413 (508)
T PLN02315 334 EKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEA 413 (508)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHH
Confidence 9999999999999999999999999999999999986300
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
||||+++....+.+||||+|+||+| +++|.+|+++||+.|+|
T Consensus 414 i~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~v 491 (508)
T PLN02315 414 IEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDSWKQYMRRSTC 491 (508)
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC--ccchHHHHHHHhhEEEE
Confidence 9999865444467899999999999 56999999999999999
Q ss_pred Eeec
Q psy10608 424 TQLW 427 (445)
Q Consensus 424 ~~~~ 427 (445)
++.+
T Consensus 492 ~~~~ 495 (508)
T PLN02315 492 TINY 495 (508)
T ss_pred EEec
Confidence 8875
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-84 Score=675.37 Aligned_cols=397 Identities=29% Similarity=0.463 Sum_probs=366.2
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIK 103 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 103 (445)
.+..+++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 17 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 96 (501)
T PLN02766 17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIE 96 (501)
T ss_pred CcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHH
Confidence 34556789999999876778899999999999999999999999999999999998 5999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhh
Q psy10608 104 ANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIP 182 (445)
Q Consensus 104 ~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 182 (445)
+++++|++++++|+|||..+++ .|+..+++.++|++.......++..+ .......++.++|+|||++|+|||||+.+.
T Consensus 97 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 175 (501)
T PLN02766 97 EHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLK-MSRQLQGYTLKEPIGVVGHIIPWNFPSTMF 175 (501)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceEEEEeccceEEEEECCCCChHHHH
Confidence 9999999999999999999997 49999999999999876665554333 122345678899999999999999999999
Q ss_pred HhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 183 LWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 183 ~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
++++++||++||+||+|||+.+|.++.++++++.++|+|+|+||+|+| +.+.++.|+.||++++|+||||+++|+.|++
T Consensus 176 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 176 FMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 5677899999999999999999999999999
Q ss_pred Hhh-cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCC
Q psy10608 262 RGA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAG 338 (445)
Q Consensus 262 ~aa-~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p 338 (445)
.++ ++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri-~V~~si~d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRV-YVQEGIYDEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 998 5899999999999999999999999999999999999999999999999 7777 69999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce---------------------------------------
Q psy10608 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK--------------------------------------- 379 (445)
Q Consensus 339 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~--------------------------------------- 379 (445)
+++++++|||+++++++++.++|++++++||++++||....
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999999986310
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||+... ..+.+||||+|+||+| +++|++|+++||+.|++
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~v 491 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFA-FDPDCPFGGYKMSGFG--RDQGMDALDKYLQVKSV 491 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHHhceEEE
Confidence 99997654 3467899999999999 57999999999999999
Q ss_pred Eeec
Q psy10608 424 TQLW 427 (445)
Q Consensus 424 ~~~~ 427 (445)
++.+
T Consensus 492 ~~~~ 495 (501)
T PLN02766 492 VTPL 495 (501)
T ss_pred EEec
Confidence 8753
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-84 Score=669.96 Aligned_cols=390 Identities=26% Similarity=0.404 Sum_probs=360.7
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
+++||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 478999999975 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 110 AENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
++++++|+|||..++.. |+..+++.++||+...+.+.+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 99999999999999864 99999999999998776665543221223445688999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+.++.|+.||++++|+||||+++|+.|++.+++++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 239 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI 239 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999885 99999999999 5678899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||++||||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 240 ~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~ 318 (472)
T TIGR03374 240 KRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRI-YAQRGIYDTLVEKLGAAVATLKSGAPDDESTEL 318 (472)
T ss_pred cceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEE-EEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999 8887 599999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CEEEeCCccc-----e----------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEG-ATLLLDGRNL-----K---------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~G-a~~~~GG~~~-----~---------------------------------------- 379 (445)
|||++++++++++++|++++++| +++++||... .
T Consensus 319 Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 398 (472)
T TIGR03374 319 GPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWA 398 (472)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHH
Confidence 99999999999999999999999 7999998531 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
||||+.... .+.+||||+|+||+| +++|++|+++||+.|++++
T Consensus 399 n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 399 NDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCccCccC--ccchHHHHHHhhceEEEEE
Confidence 999986543 467999999999999 6799999999999999975
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=671.31 Aligned_cols=395 Identities=63% Similarity=1.054 Sum_probs=367.1
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.+|..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||..+++.|+..+++.++|++...+...++..+....+...+..++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 161 (478)
T cd07085 82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI 161 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877666665443222344578999999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcE
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~ 270 (445)
++||+||+|||+.+|.++..|+++|.++|+|+|+||+++|+.+.+..|+.||+++.|+||||+.+|+.|++.++++++|+
T Consensus 162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~ 241 (478)
T cd07085 162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRV 241 (478)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcE
Confidence 99999999999999999999999999999999999999998788899999999999999999999999999999999999
Q ss_pred EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCC
Q psy10608 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPV 348 (445)
Q Consensus 271 ~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 348 (445)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||+
T Consensus 242 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpl 320 (478)
T cd07085 242 QALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVA-VAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPV 320 (478)
T ss_pred EecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 9999999999999999999999999999999999999999999 7777 699999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e-------------------------------------------
Q psy10608 349 ISPQAKERILSLIQSGVDEGATLLLDGRNL------K------------------------------------------- 379 (445)
Q Consensus 349 i~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~------------------------------------------- 379 (445)
+++++++++.++|++++++||++++||... .
T Consensus 321 i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 400 (478)
T cd07085 321 ISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII 400 (478)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999998520 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||+++....+.+||||+|+||+|+.+++|++|+++||+.|+|++.
T Consensus 401 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 99998754444678999999999996446899999999999999865
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=670.95 Aligned_cols=395 Identities=31% Similarity=0.462 Sum_probs=366.5
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
.+.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 23 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T PLN02278 23 LRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKE 102 (498)
T ss_pred CcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 44679999999987667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++|++...+...+...+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 103 ~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~ 182 (498)
T PLN02278 103 DLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVG 182 (498)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999887666555444222344567889999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
+||++||+||+|||+.+|.++..|.++|.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+++|+.|++.++++
T Consensus 183 ~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~ 262 (498)
T PLN02278 183 PALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAAT 262 (498)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999995 46789999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +++|+++|+++++++++|+|++++++
T Consensus 263 ~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 341 (498)
T PLN02278 263 VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRI-LVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVT 341 (498)
T ss_pred CCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEE-EEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999 7777 69999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e------------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K------------------------------------------ 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~------------------------------------------ 379 (445)
+||++++.+++++.++|++++++||++++||... .
T Consensus 342 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~ 421 (498)
T PLN02278 342 QGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIA 421 (498)
T ss_pred CCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHH
Confidence 9999999999999999999999999999998531 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||+.... .+.+||||+|+||+| +++|++|+++||+.|+|++.
T Consensus 422 N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 422 NDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCcCCcccCcCC--ccchHHHHHHhheeEEEEEe
Confidence 999986543 357899999999999 56999999999999999864
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-83 Score=669.73 Aligned_cols=392 Identities=31% Similarity=0.467 Sum_probs=362.3
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET-WSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+. |+++|..+|.++|+++++.|++++++|
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 3689999998766778999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCcccccc-----CCCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 110 AENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGV-----AKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
++++++|+|||..+++. |+..+++.++|++.+.....++..+.. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 99999999999999985 999999999999987665555433211 112356789999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|+||+|+|+.+.+..|+.||++++|+||||+++|+.|.+.+
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 240 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQA 240 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999655889999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.|+
T Consensus 241 a~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 319 (477)
T cd07113 241 ASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERF-YVHRSKFDELVTKLKQALSSFQVGSPMDE 319 (477)
T ss_pred HhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEE-EECHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 7887 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e---------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K--------------------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~--------------------------------------- 379 (445)
+++||||+++.+++++.++|++|+++||++++||... .
T Consensus 320 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai 399 (477)
T cd07113 320 SVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELI 399 (477)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999999999998631 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||.++.. .+.+||||+|+||+| +++|++||++||+.|+|++.
T Consensus 400 ~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 400 QLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFL-DPAVPFGGMKQSGIG--REFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCccccCC--ccchHHHHHHhhceEEEEEe
Confidence 999976543 467899999999999 67999999999999999864
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-83 Score=673.65 Aligned_cols=397 Identities=29% Similarity=0.459 Sum_probs=366.2
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIITRQQVLFRLQNIIKA 104 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~ 104 (445)
...+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+. |+.++..+|.++|+++++.|++
T Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 134 (538)
T PLN02466 55 VSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEK 134 (538)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHH
Confidence 34557899999998777889999999999999999999999999999999999984 9999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 105 NMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
++++|++++++|+|||+.+++ .|+..+++.++||+.+.+...+..++ .......++.++|+|||++|+|||||+.+.+
T Consensus 135 ~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~ 213 (538)
T PLN02466 135 HNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVP-ADGPHHVQTLHEPIGVAGQIIPWNFPLLMFA 213 (538)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCCCceEEEEEecceEEEEECCCchHHHHHH
Confidence 999999999999999999996 59999999999999877666665444 2223346889999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
+++++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+| +.+.+..|+.||++|+|+||||+++|+.|++.
T Consensus 214 ~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~ 293 (538)
T PLN02466 214 WKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293 (538)
T ss_pred HHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 45678899999999999999999999999999
Q ss_pred hhc-CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 263 GAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 263 aa~-~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|++++.++++|+|.
T Consensus 294 aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~vG~p~ 372 (538)
T PLN02466 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRT-FVHERVYDEFVEKAKARALKRVVGDPF 372 (538)
T ss_pred HHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEE-EEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 985 899999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e---------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K--------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~--------------------------------- 379 (445)
++++++||++++++++++.++|++++++||++++||... .
T Consensus 373 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred cCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 999999999999999999999999999999999998631 0
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||+.... .+.+||||+|+||+| +++|++|+++|++.|+++
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v~ 529 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVF-DAAIPFGGYKMSGIG--REKGIYSLNNYLQVKAVV 529 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCcCCCCcCccC--cccHHHHHHHhcceEEEE
Confidence 999976543 467899999999999 569999999999999998
Q ss_pred eecc
Q psy10608 425 QLWR 428 (445)
Q Consensus 425 ~~~~ 428 (445)
..+.
T Consensus 530 ~~~~ 533 (538)
T PLN02466 530 TPLK 533 (538)
T ss_pred EeCC
Confidence 7653
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=667.03 Aligned_cols=393 Identities=28% Similarity=0.453 Sum_probs=362.8
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876778899999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccC---CCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVA---KDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
+|++++++|+|||..++. .|+..+++.++||+.+.+...++..+... .....+..++|+|||++|+|||||+.+.+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999996 59999999999999877666554433111 12236788999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
+++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+++|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 45678999999999999999999999999999
Q ss_pred hhc-CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 263 GAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 263 aa~-~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
++. +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|+
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl-~V~~~i~~~f~~~l~~~~~~l~~g~p~ 324 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRL-FVEESIHDEFVRRVVEEVKKMKIGDPL 324 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEE-EEcHHHHHHHHHHHHHHHHhCCccCCC
Confidence 996 899999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------- 379 (445)
+++++||||+++++++++.++|++|+++||++++||....
T Consensus 325 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~ 404 (486)
T cd07140 325 DRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDV 404 (486)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCH
Confidence 9999999999999999999999999999999999985310
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||++... .+.+||||+|+||+| +++|++||++||+.|+
T Consensus 405 ~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~ 481 (486)
T cd07140 405 DGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKT-DVAAPFGGFKQSGFG--KDLGEEALNEYLKTKT 481 (486)
T ss_pred HHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccCcCC--CcchHHHHHHhhcEEE
Confidence 999986543 467899999999999 5699999999999999
Q ss_pred EEee
Q psy10608 423 VTQL 426 (445)
Q Consensus 423 v~~~ 426 (445)
+++.
T Consensus 482 v~~~ 485 (486)
T cd07140 482 VTIE 485 (486)
T ss_pred EEEe
Confidence 9864
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-83 Score=668.59 Aligned_cols=395 Identities=31% Similarity=0.507 Sum_probs=366.9
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERND 84 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999987667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..+++. |+..+++.++|+++..+.+.++..+ ...+...+++++|+|||++|+|||||+.+.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~ 163 (488)
T PRK13252 85 ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIP-LRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKS 163 (488)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence 9999999999999999975 9999999999999887666555433 1234456789999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
++||++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|+.+.++.|+.||++|+|+||||+++|+.|.+.++.+
T Consensus 164 ~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~ 243 (488)
T PRK13252 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243 (488)
T ss_pred HHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999666889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.+++++
T Consensus 244 l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 322 (488)
T PRK13252 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRV-FVQKSIKAAFEARLLERVERIRIGDPMDPATN 322 (488)
T ss_pred CCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999 7787 69999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e--------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K-------------------------------------- 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~-------------------------------------- 379 (445)
+|||+++.+++++.++|++++++||++++||... .
T Consensus 323 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ea 402 (488)
T PRK13252 323 FGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEV 402 (488)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHH
Confidence 9999999999999999999999999999998520 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++||+.|+|++
T Consensus 403 i~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~i~~ 479 (488)
T PRK13252 403 IARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGES-PAEMPVGGYKQSGIG--RENGIATLEHYTQIKSVQV 479 (488)
T ss_pred HHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCCCCCccCcCC--cCChHHHHHHhcceEEEEE
Confidence 999985443 467899999999999 5699999999999999987
Q ss_pred ec
Q psy10608 426 LW 427 (445)
Q Consensus 426 ~~ 427 (445)
.+
T Consensus 480 ~~ 481 (488)
T PRK13252 480 EM 481 (488)
T ss_pred eC
Confidence 64
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-83 Score=666.21 Aligned_cols=392 Identities=30% Similarity=0.461 Sum_probs=362.7
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+.+|..+|.++|+++++.|++++
T Consensus 3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07142 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence 456899999998766788999999999999999999999999999999999975 999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++. |+..+++.++|++.+++...++.++ .......+..++|+|||++|+|||||+.+.+++
T Consensus 83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLP-ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 99999999999999999875 9999999999999877666555444 222344678899999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+ .+.++.|+.||+++.|+||||+++|+.|++.++
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa 241 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999994 567899999999999999999999999999999
Q ss_pred c-CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 265 K-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 265 ~-~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+ +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++
T Consensus 242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 320 (476)
T cd07142 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRT-FVHESIYDEFVEKAKARALKRVVGDPFRK 320 (476)
T ss_pred HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeE-EEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++++||++++.+++++.++|++++++||++++||....
T Consensus 321 ~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai 400 (476)
T cd07142 321 GVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVI 400 (476)
T ss_pred CCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999986310
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|++++
T Consensus 401 ~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~~ 476 (476)
T cd07142 401 KRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVF-DASIPFGGYKMSGIG--REKGIYALNNYLQVKAVVM 476 (476)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCccCcCC--ccchHHHHHHhhheeEEeC
Confidence 999986544 467999999999999 5799999999999999863
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-82 Score=664.48 Aligned_cols=395 Identities=31% Similarity=0.473 Sum_probs=366.2
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHh-----hhhcCCCHHHHHHHHHHHHHHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY-----ETWSKTSIITRQQVLFRLQNIIK 103 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~ 103 (445)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| +.|+.+|..+|.++|+++++.|+
T Consensus 7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~ 86 (503)
T PLN02467 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT 86 (503)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence 4478999999987667889999999999999999999999999999999999 89999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccc-c--cCCCCceeEEEecCCeEEEECCCCcchh
Q psy10608 104 ANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA-G--VAKDMDIHSYRVPLGVTAGITPFNFPAM 180 (445)
Q Consensus 104 ~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 180 (445)
+++++|++++++|+|||+.+++.|+..+++.++||+...+.+.+.... . ...+...+++++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T PLN02467 87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL 166 (503)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence 999999999999999999999999999999999999887766554321 0 1113346789999999999999999999
Q ss_pred hhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHH
Q psy10608 181 IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYI 259 (445)
Q Consensus 181 ~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 259 (445)
+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|
T Consensus 167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 246 (503)
T PLN02467 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246 (503)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 56778999999999999999999999999
Q ss_pred HHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccC
Q psy10608 260 YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSA 337 (445)
Q Consensus 260 ~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~ 337 (445)
++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++||
T Consensus 247 ~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~g~ 325 (503)
T PLN02467 247 MTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRL-LVHERIASEFLEKLVKWAKNIKISD 325 (503)
T ss_pred HHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEE-EEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999999999 8887 6999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e-------------------------------
Q psy10608 338 GNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K------------------------------- 379 (445)
Q Consensus 338 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~------------------------------- 379 (445)
|.++++++|||+++.+++++.++|++++.+||++++||... .
T Consensus 326 p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 405 (503)
T PLN02467 326 PLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFS 405 (503)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeC
Confidence 99999999999999999999999999999999999998531 0
Q ss_pred ---------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhhee
Q psy10608 380 ---------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTET 420 (445)
Q Consensus 380 ---------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~ 420 (445)
||||++... ...+||||+|+||+| +++|++|+++||+.
T Consensus 406 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~ 482 (503)
T PLN02467 406 TEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPC-FCQAPWGGIKRSGFG--RELGEWGLENYLSV 482 (503)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccCcCC--CcchHHHHHHhhCe
Confidence 999986543 467899999999999 67999999999999
Q ss_pred EEEEeec
Q psy10608 421 KTVTQLW 427 (445)
Q Consensus 421 k~v~~~~ 427 (445)
|+++..+
T Consensus 483 k~i~~~~ 489 (503)
T PLN02467 483 KQVTKYI 489 (503)
T ss_pred EEEEEec
Confidence 9998754
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-83 Score=664.53 Aligned_cols=391 Identities=28% Similarity=0.461 Sum_probs=363.3
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++|+++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999987777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHH
Q psy10608 111 ENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA 189 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 189 (445)
+++++|+|||+.+++. |+..+++.++||++..+...+...+ ...+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSE-IDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999975 9999999999999876655554332 2234557889999999999999999999999999999
Q ss_pred hhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCC
Q psy10608 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268 (445)
Q Consensus 190 LaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 268 (445)
|++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+.++.|+.||++++|+||||+.+|+.|++.++++++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~ 239 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLI 239 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999996 99999999999 46788999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeeEecCCC-----CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 269 RVQSNMGAKNHGVIMSDA-----NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 269 ~~~lElGGk~~~iV~~da-----Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
|+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|+++
T Consensus 240 p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 318 (480)
T cd07559 240 PVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRA-LVQESIYDEFIERAVERFEAIKVGNPLDP 318 (480)
T ss_pred cEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999 999999999999999999999999999 7787 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------K------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~------------------------------------ 379 (445)
++++|||+++++++++.++|++|+++||++++||... .
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 398 (480)
T cd07559 319 ETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDE 398 (480)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCH
Confidence 9999999999999999999999999999999998531 0
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||++... .+.+||||+|+||+| +++|++|+++||+.|+
T Consensus 399 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~ 475 (480)
T cd07559 399 EEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQY-PAHAPFGGYKKSGIG--RETHKMMLDHYQQTKN 475 (480)
T ss_pred HHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCCccCcCC--ccChHHHHHHhhceEE
Confidence 999976544 367999999999999 5699999999999999
Q ss_pred EEeec
Q psy10608 423 VTQLW 427 (445)
Q Consensus 423 v~~~~ 427 (445)
+++++
T Consensus 476 v~~~~ 480 (480)
T cd07559 476 ILVSY 480 (480)
T ss_pred EEEeC
Confidence 98753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-82 Score=661.31 Aligned_cols=390 Identities=25% Similarity=0.406 Sum_probs=360.0
Q ss_pred eecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy10608 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAEN 112 (445)
Q Consensus 33 ~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 112 (445)
+|||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999975 467999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhc
Q psy10608 113 ITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIAC 192 (445)
Q Consensus 113 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaa 192 (445)
+++|+|||+.+++.|+..+++.++|++...+.+.+...+...++...+..++|+|||++|+|||||+.++++++++||++
T Consensus 80 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 159 (474)
T cd07130 80 VSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVC 159 (474)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHc
Confidence 99999999999999999999999999887666655443322234456788999999999999999999999999999999
Q ss_pred CCEEEEeCCCCChHHHHHHHHHH----HHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCC
Q psy10608 193 GNTHVIKPSERDPGACMMLVDML----TQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268 (445)
Q Consensus 193 GN~VVlKps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 268 (445)
||+||+|||+.+|.++..+++++ .++|+|+|++|+|+|+.+.++.|+.||+||+|+||||+++|+.|++.++++++
T Consensus 160 GN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~ 239 (474)
T cd07130 160 GNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFG 239 (474)
T ss_pred CCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCC
Confidence 99999999999999998877664 79999999999999987788999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCC
Q psy10608 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLG 346 (445)
Q Consensus 269 ~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~G 346 (445)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++++++|
T Consensus 240 ~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~G 318 (474)
T cd07130 240 RSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRL-IVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVG 318 (474)
T ss_pred CEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEE-EEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999 7887 6999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e------------------------------------------
Q psy10608 347 PVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K------------------------------------------ 379 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~------------------------------------------ 379 (445)
||+++.+++++.++|++|+++||++++||... .
T Consensus 319 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~ 398 (474)
T cd07130 319 PLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEV 398 (474)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999999999999631 0
Q ss_pred -----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 -----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 -----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||.++....+.+||||+|+||+| +++|++|+++|++.|++++.+
T Consensus 399 ~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 399 PQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG--RESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred CCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC--ccchHHHHHHHhheEEEEEec
Confidence 9999765444467899999999999 679999999999999988754
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-82 Score=659.77 Aligned_cols=390 Identities=29% Similarity=0.461 Sum_probs=361.5
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 57999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHH
Q psy10608 111 ENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA 189 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 189 (445)
+++++|+|||+.+++. |+..+++.++||+...+...++..+ ...+...+++++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANM-IDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999985 9999999999998776555444332 1223456889999999999999999999999999999
Q ss_pred hhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCC
Q psy10608 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268 (445)
Q Consensus 190 LaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 268 (445)
|++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+.++.|+.||+++.|+||||+++|+.|.++++++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999985 99999999998 46788999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCC
Q psy10608 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLG 346 (445)
Q Consensus 269 ~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~G 346 (445)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++|
T Consensus 240 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~g 318 (475)
T cd07117 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRI-FVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMG 318 (475)
T ss_pred cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEE-EEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccc
Confidence 999999999999999999999999999999999999999999999 7777 6999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e-----------------------------------------
Q psy10608 347 PVISPQAKERILSLIQSGVDEGATLLLDGRNL------K----------------------------------------- 379 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~----------------------------------------- 379 (445)
|++++++++++.++|++++++||++++||... .
T Consensus 319 pli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~ 398 (475)
T cd07117 319 AQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVID 398 (475)
T ss_pred CcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHH
Confidence 99999999999999999999999999998531 0
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|++++.
T Consensus 399 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 399 MANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQI-PAGAPFGGYKKSGIG--RETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCccCcCC--CCchHHHHHHHhCeEEEEEe
Confidence 999986544 467899999999999 67999999999999999764
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-82 Score=657.36 Aligned_cols=396 Identities=54% Similarity=0.941 Sum_probs=366.7
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
++++.|+|||+.+++.|+..+++.++|++.....+.++..+....+...+..++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999877766665443222344567889999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcE
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~ 270 (445)
++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+.+|+.|.+.++.++||+
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v 241 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV 241 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeE
Confidence 99999999999999999999999999999999999999998788899999999999999999999999999999999999
Q ss_pred EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc-cchHHHHHHHHHHhccccCCCCCCCCCCCCC
Q psy10608 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE-AVEWLPELKKRAEALKVSAGNVPGTDLGPVI 349 (445)
Q Consensus 271 ~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~-~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli 349 (445)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ .++|+++|+++++++++|+|.+++++||||+
T Consensus 242 ~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl-~v~~~~~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i 320 (477)
T TIGR01722 242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLI 320 (477)
T ss_pred EEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEE-EEeCcHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCc
Confidence 9999999999999999999999999999999999999999999 6666 5999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeCCccc------e--------------------------------------------
Q psy10608 350 SPQAKERILSLIQSGVDEGATLLLDGRNL------K-------------------------------------------- 379 (445)
Q Consensus 350 ~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~-------------------------------------------- 379 (445)
++++++++.++|++|+++||++++||... .
T Consensus 321 ~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n 400 (477)
T TIGR01722 321 TPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALIN 400 (477)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999988531 0
Q ss_pred -----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 -----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 -----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||+++....+.+||||+|+||+|+.+++|++|+++||+.|++++.|
T Consensus 401 ~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~ 477 (477)
T TIGR01722 401 ASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477 (477)
T ss_pred CCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence 999986544446789999999999964468999999999999998753
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-82 Score=658.08 Aligned_cols=390 Identities=31% Similarity=0.505 Sum_probs=359.1
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET-WSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|..+|.++|++++++|+++.++|
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 79 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF 79 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 5799999996 4578999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCcccccc---CCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 110 AENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGV---AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++++++|+|||..+++. |+..+++.+++++...+.+.+...+.. ..+...+..++|+|||++|+|||||+.+.+++
T Consensus 80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~ 159 (481)
T TIGR03216 80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK 159 (481)
T ss_pred HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence 99999999999999975 999999999999887665544433211 11234678899999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-Ch-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AH-DAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+| +. +.++.|..||++|.|+||||+++|+.|++.+
T Consensus 160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~a 239 (481)
T TIGR03216 160 VGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239 (481)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 44 4778899999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++
T Consensus 240 a~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 318 (481)
T TIGR03216 240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERV-YVERPIFDRFVAALKARAESLKIGVPDDP 318 (481)
T ss_pred hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 7887 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e-----------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K----------------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~----------------------------------- 379 (445)
+++|||++++.+++++.++|++|+++||++++||... .
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~ 398 (481)
T TIGR03216 319 ATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDS 398 (481)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCC
Confidence 9999999999999999999999999999999998531 0
Q ss_pred --------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 --------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 --------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++||+.|
T Consensus 399 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~f~~~k 475 (481)
T TIGR03216 399 EEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR-DLRTPFGGSKLSGIG--REGGVHSLEFYTELT 475 (481)
T ss_pred HHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCcCCcccCcCC--cCchHHHHHHhhceE
Confidence 999986544 467899999999999 579999999999999
Q ss_pred EEEee
Q psy10608 422 TVTQL 426 (445)
Q Consensus 422 ~v~~~ 426 (445)
+++++
T Consensus 476 ~v~~~ 480 (481)
T TIGR03216 476 NVCIK 480 (481)
T ss_pred EEEEe
Confidence 99864
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-82 Score=657.79 Aligned_cols=392 Identities=29% Similarity=0.483 Sum_probs=364.3
Q ss_pred eeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAE 111 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 111 (445)
+||||+|+.+. +.+++++||+||+++++++.++.+|++.++++|++||+.|+++|.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999875 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhh
Q psy10608 112 NITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191 (445)
Q Consensus 112 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALa 191 (445)
++++|+|||+.+++.|+..+++.++|++...+.+.++..+....+...+..++|+|||++|+|||||+.+.++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa 159 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV 159 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998777666554442223445678999999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHc----CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQA----GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
+||+||+|||+.+|.++..++++|.++ |+|+|++|+|+|+.+.++.|..||++|+|+||||+++|+.|++.+++++
T Consensus 160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~ 239 (478)
T cd07086 160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF 239 (478)
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 999999999999999999999999999 9999999999997668889999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 240 ~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (478)
T cd07086 240 GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRL-IVHESVYDEFLERLVKAYKQVRIGDPLDEGTLV 318 (478)
T ss_pred CcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEE-EEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999 7787 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e---------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K--------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~--------------------------------------- 379 (445)
||++++.+++++.++|++|+++|+++++||... .
T Consensus 319 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~ 398 (478)
T cd07086 319 GPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAI 398 (478)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999988520 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||+++....+.+||||+|+||+| +++|++|+++|++.|+|++.
T Consensus 399 ~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G--~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 399 NNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG--RESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred HhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC--ccchHHHHHHhhceEEEEEe
Confidence 9999865444467899999999999 56999999999999999876
Q ss_pred c
Q psy10608 427 W 427 (445)
Q Consensus 427 ~ 427 (445)
+
T Consensus 477 ~ 477 (478)
T cd07086 477 Y 477 (478)
T ss_pred C
Confidence 4
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-82 Score=657.00 Aligned_cols=390 Identities=27% Similarity=0.418 Sum_probs=359.6
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
+++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 36799999998777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 110 AENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
+++++.|+|||+.+++. |+..+++.++||++..+...+...+ ...+...+..++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISE-IDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeec-CCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999975 9999999999999876655544332 223345678999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+.+..|+.||+|++|+||||+++|+.|.+.+++++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 238 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENI 238 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999998 99999999999 5678899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCC------CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSD------ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~d------aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
+|+++|||||||+||++| ||+|.|++.++++. +|+||.|++++|| +||+ +|+|+++|.++++++++|+|+
T Consensus 239 ~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 239 IPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRA-LIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999998 79999999999865 5999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e----------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------K---------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~---------------------------------- 379 (445)
++++.+||++++++++++.++|++++++||++++||... .
T Consensus 317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~~~~ 396 (479)
T cd07116 317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTTFKD 396 (479)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEEeCC
Confidence 999999999999999999999999999999999988421 0
Q ss_pred --------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 --------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 --------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
||||++... .+.+||||+|+||+| +++|++||++||++|
T Consensus 397 ~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k 473 (479)
T cd07116 397 EEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLY-PAHAAFGGYKQSGIG--RENHKMMLDHYQQTK 473 (479)
T ss_pred HHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCcCCCccCcCC--ccChHHHHHHhhceE
Confidence 999986544 467899999999999 669999999999999
Q ss_pred EEEee
Q psy10608 422 TVTQL 426 (445)
Q Consensus 422 ~v~~~ 426 (445)
+++++
T Consensus 474 ~~~~~ 478 (479)
T cd07116 474 NLLVS 478 (479)
T ss_pred EEEEe
Confidence 99864
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-82 Score=657.92 Aligned_cols=392 Identities=36% Similarity=0.563 Sum_probs=361.3
Q ss_pred cceeecCEeeeCCCCCeEEeecCC-CCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~-~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
+++||||+|+.+.+ .++++||+ ||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 1 ~~~~i~g~~~~~~~--~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 1 YRNYIDGEWVAGGD--GEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CCceECCEEecCCC--CceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 36799999997643 36999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||+.......+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 79 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ 158 (473)
T cd07097 79 LARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAP 158 (473)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHH
Confidence 99999999999999999999999999999998776655543332223455789999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+++..|+.|+++++|+||||+.+|+.|.+.+++++
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~ 238 (473)
T cd07097 159 ALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARG 238 (473)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999995 568899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 239 ~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 317 (473)
T cd07097 239 ARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRL-IVTEGIHDRFVEALVERTKALKVGDALDEGVDI 317 (473)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeE-EEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e---------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K--------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~--------------------------------------- 379 (445)
|||+++++++++.++|++|+++|+++++||... .
T Consensus 318 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 397 (473)
T cd07097 318 GPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAI 397 (473)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHH
Confidence 999999999999999999999999999998531 0
Q ss_pred -------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 -------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 -------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||+++....+.+||||+|+||+|. +++|++|+++||+.|+|++
T Consensus 398 ~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~-~~~g~~~l~~f~~~k~v~~ 473 (473)
T cd07097 398 ANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP-REQGEAALEFYTTIKTVYV 473 (473)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc-cCCcHHHHHHhhceeEEeC
Confidence 99998654444678999999999993 3589999999999999863
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-82 Score=659.35 Aligned_cols=391 Identities=31% Similarity=0.508 Sum_probs=363.7
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999987667789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcc-cccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHH
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPT-IMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA 189 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 189 (445)
+++++|+|||..+++.|+..+++.++|+++..+ ...++.++. .....+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 159 (488)
T TIGR02299 82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159 (488)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccC--CCceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999988766 444444431 13456788999999999999999999999999999
Q ss_pred hhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCC
Q psy10608 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268 (445)
Q Consensus 190 LaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 268 (445)
|++||+||+|||+.+|.++.+++++|.++|+|+|+||+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~ 239 (488)
T TIGR02299 160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK 239 (488)
T ss_pred HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999998 56778899999999999999999999999999999999
Q ss_pred cEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCC
Q psy10608 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLG 346 (445)
Q Consensus 269 ~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~G 346 (445)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++|
T Consensus 240 ~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv-~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~G 318 (488)
T TIGR02299 240 RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRL-LVQESIAEDFVEKLVERVRAIRVGHPLDPETEVG 318 (488)
T ss_pred eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEE-EEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999 7787 6999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-------------c---e-------------------------------
Q psy10608 347 PVISPQAKERILSLIQSGVDEGATLLLDGRN-------------L---K------------------------------- 379 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-------------~---~------------------------------- 379 (445)
|++++++++++.++|++++++||++++||.. + .
T Consensus 319 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (488)
T TIGR02299 319 PLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEE 398 (488)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHH
Confidence 9999999999999999999999999999742 0 0
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 399 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~i~ 475 (488)
T TIGR02299 399 AIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVR-HLPTPFGGVKASGIG--REGGTYSFDFYTETKNVA 475 (488)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCccCcCC--ccchHHHHHHHhceEEEE
Confidence 999976543 467899999999999 579999999999999999
Q ss_pred eec
Q psy10608 425 QLW 427 (445)
Q Consensus 425 ~~~ 427 (445)
+++
T Consensus 476 ~~~ 478 (488)
T TIGR02299 476 LAL 478 (488)
T ss_pred Eec
Confidence 865
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=656.42 Aligned_cols=392 Identities=27% Similarity=0.436 Sum_probs=363.6
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
.++||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 81 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEF 81 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999875 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 110 AENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
++++++|+|||..++.. |+..+++.+++++...+.+.+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 82 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ 161 (475)
T PRK13473 82 ARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAP 161 (475)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHH
Confidence 99999999999999864 99999999999987766655543221123345678899999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+.+..|+.||++|+|+||||+++|+.|.+.+++++
T Consensus 162 ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~ 240 (475)
T PRK13473 162 ALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240 (475)
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999 99999999999 6788899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
+|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 241 ~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~ 319 (475)
T PRK13473 241 KRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRI-YAQRGIYDDLVAKLAAAVATLKVGDPDDEDTEL 319 (475)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999 7787 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CEEEeCCccc---e------------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEG-ATLLLDGRNL---K------------------------------------------ 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~G-a~~~~GG~~~---~------------------------------------------ 379 (445)
|||+++.+++++.++|++++++| |++++||... .
T Consensus 320 gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 399 (475)
T PRK13473 320 GPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWA 399 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHH
Confidence 99999999999999999999999 9999998631 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|++++.|
T Consensus 400 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 400 NDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKQSGYG--KDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCccccccC--ccchHHHHHHHhceEEEEEec
Confidence 999987654 467899999999999 679999999999999999876
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-81 Score=653.87 Aligned_cols=394 Identities=33% Similarity=0.496 Sum_probs=363.9
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHHHHH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKTSIITRQQVLFRLQNIIK 103 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~ 103 (445)
+..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|+
T Consensus 4 ~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~ 83 (481)
T cd07141 4 IKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIE 83 (481)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHH
Confidence 4456789999999876778899999999999999999999999999999999998 6999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhh
Q psy10608 104 ANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIP 182 (445)
Q Consensus 104 ~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 182 (445)
++.++|++++++|+|||..++ ..|+..+++.+++++...+...++..+ ...+...+..++|+|||++|+|||||+.+.
T Consensus 84 ~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 84 RDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIP-MDGDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-CCCCceEEEEEeceeEEEEEccChhHHHHH
Confidence 999999999999999999766 459999999999999877666655443 122345678999999999999999999999
Q ss_pred HhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 183 LWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 183 ~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+| +.+.++.|+.||++|+|+||||+.+|+.|++
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 4567889999999999999999999999999
Q ss_pred Hhhc-CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCC
Q psy10608 262 RGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAG 338 (445)
Q Consensus 262 ~aa~-~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p 338 (445)
.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRT-FVQESIYDEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEE-EEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9886 899999999999999999999999999999999999999999999999 7777 69999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce---------------------------------------
Q psy10608 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK--------------------------------------- 379 (445)
Q Consensus 339 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~--------------------------------------- 379 (445)
+|+++++|||+++.+++++.++|++|+++||++++||....
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 99999999999999999999999999999999999996410
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|++
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v 478 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVV-SPQAPFGGYKMSGNG--RELGEYGLQEYTEVKTV 478 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCCCcccCcCC--ccchHHHHHHHhheEEE
Confidence 999986543 467899999999999 56999999999999999
Q ss_pred Ee
Q psy10608 424 TQ 425 (445)
Q Consensus 424 ~~ 425 (445)
++
T Consensus 479 ~~ 480 (481)
T cd07141 479 TI 480 (481)
T ss_pred EE
Confidence 75
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-81 Score=651.49 Aligned_cols=392 Identities=31% Similarity=0.471 Sum_probs=361.8
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh-hhc-CCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-TWS-KTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+ .+|..+|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3679999999876677899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..++ ..|+..+++.+++++.+++...++..+ ...+...+..++|+|||++|+|||||+.+.++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIE-TDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999765 459999999999999887665554433 2234456789999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.++.|+.||++|.|+||||+.+|+.|++.+++
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999994 5678999999999999999999999999999885
Q ss_pred -CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 266 -NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 266 -~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.+++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRI-YVQEGIYDKFVKRFKEKAKKLKVGDPFAED 324 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEE-EEeHhHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------- 379 (445)
+++||++++.+++++.++|++++++|+++++||....
T Consensus 325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 404 (481)
T cd07143 325 TFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIK 404 (481)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHH
Confidence 9999999999999999999999999999999986310
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||+++.. .+.+||||+|+||+| +++|++|+++||+.|++++.
T Consensus 405 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 405 RANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLL-HHQVPFGGYKQSGIG--RELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCCCccccccC--cccHHHHHHHHhCeEEEEEe
Confidence 999987554 467899999999999 67999999999999999764
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-81 Score=646.90 Aligned_cols=378 Identities=23% Similarity=0.330 Sum_probs=349.4
Q ss_pred CCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHh
Q psy10608 44 TDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLAD 123 (445)
Q Consensus 44 ~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 123 (445)
.++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|++++++|+|||..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCC
Q psy10608 124 AEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203 (445)
Q Consensus 124 a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~ 203 (445)
++.|+..+++.++||+.......+.... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999999776544332211 123445688999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEec
Q psy10608 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIM 283 (445)
Q Consensus 204 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~ 283 (445)
+|.++.++++++.++|+|+|++|+|+|+.+.+..|+.||++++|+||||+++|+.|++.++++++|+++|||||||+||+
T Consensus 165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~ 244 (462)
T PRK13968 165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244 (462)
T ss_pred ChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEEC
Confidence 99999999999999999999999999865556679999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy10608 284 SDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLI 361 (445)
Q Consensus 284 ~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i 361 (445)
+|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 245 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i 323 (462)
T PRK13968 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRF-IIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQV 323 (462)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCcCCcEE-EECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999 7787 6999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCCccc-----e---------------------------------------------------------
Q psy10608 362 QSGVDEGATLLLDGRNL-----K--------------------------------------------------------- 379 (445)
Q Consensus 362 ~~a~~~Ga~~~~GG~~~-----~--------------------------------------------------------- 379 (445)
++++.+||++++||... .
T Consensus 324 ~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~ 403 (462)
T PRK13968 324 EATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDET 403 (462)
T ss_pred HHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 99999999999998531 0
Q ss_pred -------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||+.... .+.+||||+|+||+| +++|++||++|++.|+|++.
T Consensus 404 ~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 404 QARQMAARLECGGVFINGYCAS-DARVAFGGVKKSGFG--RELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHHHHHHhCCcceEEECCCCCC-CCCCCCCCccccccC--cCchHHHHHHhcceeEEEEe
Confidence 999987543 467899999999999 67999999999999999764
|
|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=646.86 Aligned_cols=388 Identities=29% Similarity=0.455 Sum_probs=359.4
Q ss_pred CEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy10608 36 GKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITE 115 (445)
Q Consensus 36 G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 115 (445)
|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67887766678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCE
Q psy10608 116 EQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNT 195 (445)
Q Consensus 116 e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~ 195 (445)
|+|||..++..|+..+++.++|++.+.+...++..+....+...++.++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999988766655544422235557888999999999999999999999999999999999
Q ss_pred EEEeCCCCChHHH-HHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEe
Q psy10608 196 HVIKPSERDPGAC-MMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN 273 (445)
Q Consensus 196 VVlKps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lE 273 (445)
||+|||+.+|.++ .++.+++.++|+|+|+||+|+| +.+.+..|+.||.+++|+||||+.+|+.|++.++++++|+++|
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE 240 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999999996 7899999999999999999998 4677899999999999999999999999999999999999999
Q ss_pred CCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCH
Q psy10608 274 MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISP 351 (445)
Q Consensus 274 lGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~ 351 (445)
||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++.+||++++
T Consensus 241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 319 (465)
T cd07151 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRI-IVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINE 319 (465)
T ss_pred CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCH
Confidence 9999999999999999999999999999999999999999 7777 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------------
Q psy10608 352 QAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------------- 379 (445)
Q Consensus 352 ~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------------- 379 (445)
.+++++.++|++++++||++++||....
T Consensus 320 ~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 399 (465)
T cd07151 320 SQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGA 399 (465)
T ss_pred HHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEE
Confidence 9999999999999999999999985210
Q ss_pred --------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 --------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 --------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++.....+.+||||+|+||+| +++|++||++||+.|+++++
T Consensus 400 v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 400 VFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG--RFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred EECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC--cCChHHHHHHhhceEEEEec
Confidence 9999875443467899999999999 56999999999999999864
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-80 Score=649.25 Aligned_cols=392 Identities=31% Similarity=0.482 Sum_probs=362.3
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET-WSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+.+|..+|.++|+++++.|++++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 87 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDL 87 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999998766678999999999999999999999999999999999996 88999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 109 LAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
|++++++|+|||..++ ..|+..+++.+++++.+.+...++..+. ..+...+..++|+|||++|+|||||+.+.+++++
T Consensus 88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 166 (484)
T cd07144 88 LAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPT-SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLA 166 (484)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCceEEEEEecceEEEEECcCCCHHHHHHHHHH
Confidence 9999999999998765 5799999999999998776665554432 2334567889999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
+||++||+||+|||+.+|.++..|.++|.++|+|+|++|+|+| +.+.++.|+.||++++|+||||+.+|+.|++.++++
T Consensus 167 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~ 246 (484)
T cd07144 167 PALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQN 246 (484)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 567889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHh-ccccCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEA-LKVSAGNVPGT 343 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~-l~vG~p~~~~~ 343 (445)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.+++++ +++|+|.++++
T Consensus 247 ~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~ 325 (484)
T cd07144 247 LKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRI-YVQESIYDKFVEKFVEHVKQNYKVGSPFDDDT 325 (484)
T ss_pred CCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceE-EEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999 7787 69999999999985 99999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e---------------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K--------------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~--------------------------------------- 379 (445)
+|||++++++++++.++|++++++|+++++||... .
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 405 (484)
T cd07144 326 VVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEA 405 (484)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHH
Confidence 99999999999999999999999999999988531 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+|++
T Consensus 406 i~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~ 482 (484)
T cd07144 406 IKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDS-DVGVPFGGFKMSGIG--RELGEYGLETYTQTKAVHI 482 (484)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC-CCCCCcCCcccCcCC--CCchHHHHHHhhceEEEEE
Confidence 999987543 467899999999999 5699999999999999986
Q ss_pred e
Q psy10608 426 L 426 (445)
Q Consensus 426 ~ 426 (445)
+
T Consensus 483 ~ 483 (484)
T cd07144 483 N 483 (484)
T ss_pred e
Confidence 4
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-80 Score=649.54 Aligned_cols=390 Identities=33% Similarity=0.537 Sum_probs=362.7
Q ss_pred eecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 33 ~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999776677899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||..+++.|+..+++.++|++...+...++..+ ...+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD-VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999877665554433 22345578999999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCc
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 269 (445)
++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+. +.++.|+.||++++|+||||+++|+.|++.++++++|
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 239 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999854 5789999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCC
Q psy10608 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGP 347 (445)
Q Consensus 270 ~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gp 347 (445)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||
T Consensus 240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRL-LVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999 7787 69999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e------------------------------------------
Q psy10608 348 VISPQAKERILSLIQSGVDEGATLLLDGRNL------K------------------------------------------ 379 (445)
Q Consensus 348 li~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~------------------------------------------ 379 (445)
++++.+++++.++|++++++||++++||... .
T Consensus 319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 398 (482)
T cd07119 319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRL 398 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHH
Confidence 9999999999999999999999999998521 0
Q ss_pred -------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 -------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 -------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||+... ..+.+||||+|+||+| +++|++|+++||+.|++++.+
T Consensus 399 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 399 ANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHP-YFAEAPWGGYKQSGIG--RELGPTGLEEYQETKHININL 474 (482)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHHhceEEEEEec
Confidence 99998644 3467899999999999 569999999999999998765
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-80 Score=652.14 Aligned_cols=394 Identities=36% Similarity=0.509 Sum_probs=363.2
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+..++||||+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 31 REYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 45688999999964 46799999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
++|++++++|+|||..+++.|+..+++.++||+...+...+...+ ...+...+++++|+|||++|+|||||+.+.++++
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 187 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVE-MVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMT 187 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 999999999999999999999999999999999887766555443 2234567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|+.||+++.|+||||+.+|+.|.+.+++
T Consensus 188 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 267 (512)
T cd07124 188 TAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAK 267 (512)
T ss_pred HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999 45678999999999999999999999999999886
Q ss_pred ------CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccC
Q psy10608 266 ------NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSA 337 (445)
Q Consensus 266 ------~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~ 337 (445)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+
T Consensus 268 ~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~ 346 (512)
T cd07124 268 VQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRV-IVHESVYDEFLERLVERTKALKVGD 346 (512)
T ss_pred ccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEE-EEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 699999999999999999999999999999999999999999999999 7887 5999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----e----------------------------------
Q psy10608 338 GNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----K---------------------------------- 379 (445)
Q Consensus 338 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----~---------------------------------- 379 (445)
|.|+++++||++++.+++++.++|++++. |+++++||... .
T Consensus 347 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 425 (512)
T cd07124 347 PEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK 425 (512)
T ss_pred CCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecC
Confidence 99999999999999999999999999998 89999998520 0
Q ss_pred ---------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhhe
Q psy10608 380 ---------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTE 419 (445)
Q Consensus 380 ---------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~ 419 (445)
||||..... ..+.+||||+|+||+|+ +++|++|+++||+
T Consensus 426 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~~~~~t~ 504 (512)
T cd07124 426 DFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGS-KAGGPDYLLQFMQ 504 (512)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-ccCcHHHHHHhcc
Confidence 999976432 23568999999999994 3589999999999
Q ss_pred eEEEEeec
Q psy10608 420 TKTVTQLW 427 (445)
Q Consensus 420 ~k~v~~~~ 427 (445)
.|+|+++|
T Consensus 505 ~k~v~~~~ 512 (512)
T cd07124 505 PKTVTENF 512 (512)
T ss_pred EEEEEEeC
Confidence 99998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=647.31 Aligned_cols=394 Identities=37% Similarity=0.590 Sum_probs=363.8
Q ss_pred eeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
+||||+|+.+.++++++++||+| ++++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999876678899999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||..+++.|+..+++.++|++...+.+.++..+....+...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877666555443222334578899999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCc
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 269 (445)
++||+||+|||+.+|.++..++++|.++|+|+|+||+++|+ .+.+..|+.||++++|+||||+++|+.|.+.++++++|
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999994 45889999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCC
Q psy10608 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGP 347 (445)
Q Consensus 270 ~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gp 347 (445)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||
T Consensus 241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gp 319 (478)
T cd07131 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRL-IVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGP 319 (478)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999 7777 69999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----------e--------------------------------------
Q psy10608 348 VISPQAKERILSLIQSGVDEGATLLLDGRNL----------K-------------------------------------- 379 (445)
Q Consensus 348 li~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----------~-------------------------------------- 379 (445)
++++.+++++.++|++|+++|+++++||... .
T Consensus 320 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~ 399 (478)
T cd07131 320 LINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEI 399 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999988531 0
Q ss_pred -------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 -------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 -------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||+++....+.+||||+|+||+|. +++|++|+++||+.|+|++++
T Consensus 400 ~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~-~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07131 400 ANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH-REAGTTALDAFTEWKAVYVDY 477 (478)
T ss_pred HhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC-cCCcHHHHHHhhheEEEEEeC
Confidence 99998765444679999999999994 357999999999999998753
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-80 Score=646.36 Aligned_cols=390 Identities=34% Similarity=0.509 Sum_probs=360.8
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhc--CCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWS--KTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+.|+ .+|.++|.++|+++++.|+++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4789999999876678899999999999999999999999999999999999855 99999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..++ ..|+..+++.+++++++.+...++..+ ...+...+..++|+|||++|+|||||+.+.++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIP-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999998665 459999999999999876665555443 2234556889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.||++|+|+||||+.+|+.|++.++.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~ 242 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 56678899999999999999999999999999987
Q ss_pred -CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 266 -NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 266 -~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++
T Consensus 243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~ 321 (476)
T cd07091 243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRI-FVQESIYDEFVEKFKARAEKRVVGDPFDPD 321 (476)
T ss_pred cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEE-EEeHHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------- 379 (445)
+++||++++.+++++.++|++++++||++++||....
T Consensus 322 ~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 401 (476)
T cd07091 322 TFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIE 401 (476)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHH
Confidence 9999999999999999999999999999999986310
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 402 ~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 402 RANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVF-DAAVPFGGFKQSGFG--RELGEEGLEEYTQVKAVT 475 (476)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCcccCcCC--ccchHHHHHHhhceeEEe
Confidence 999986544 467899999999999 679999999999999986
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=642.92 Aligned_cols=375 Identities=25% Similarity=0.357 Sum_probs=347.4
Q ss_pred EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 47 ~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~ 204 (445)
|+..+++.++||+..+....+..... .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 99999999999998765544322110 1123356788999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 205 PGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 205 p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
|.++.+|+++|.++|+|+|+||+|+++.+.+..|+.|+++++|+||||+++|+.|++.+++++||+++|+|||||+||++
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~ 242 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMP 242 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECC
Confidence 99999999999999999999999987666778899999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~ 362 (445)
|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||++++.+++++.++|+
T Consensus 243 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~ 321 (457)
T PRK09406 243 SADLDRAAETAVTARVQNNGQSCIAAKRF-IVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVD 321 (457)
T ss_pred CCCHHHHHHHHHHHHhhCCCCcccCCeEE-EEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 7887 59999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCccce---------------------------------------------------------------
Q psy10608 363 SGVDEGATLLLDGRNLK--------------------------------------------------------------- 379 (445)
Q Consensus 363 ~a~~~Ga~~~~GG~~~~--------------------------------------------------------------- 379 (445)
+++++||++++||....
T Consensus 322 ~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~ 401 (457)
T PRK09406 322 DAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAE 401 (457)
T ss_pred HHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 99999999999986410
Q ss_pred ------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
||||++... .+.+||||+|+||+| +++|++|+++||+.|+|++
T Consensus 402 ~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 402 QERFIDDLEAGQVFINGMTVS-YPELPFGGVKRSGYG--RELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHHHHhCCcceEEECCCCCC-CCCCCCCCccccccC--ccchHHHHHHhhceEEEEe
Confidence 999986543 467999999999999 5699999999999999864
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-80 Score=650.30 Aligned_cols=400 Identities=23% Similarity=0.309 Sum_probs=363.2
Q ss_pred cccccccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q psy10608 24 IRHIATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNII 102 (445)
Q Consensus 24 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l 102 (445)
......+++||+|+|+.+ ++.+++++||.| |+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|++++++|
T Consensus 26 ~~~~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l 104 (533)
T TIGR01236 26 KSHPIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLL 104 (533)
T ss_pred hhcCeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 335577889999999975 456899999997 899999999999999999999999999999999999999999999999
Q ss_pred H-HhHHHHHHHHHHHhCCChHhhhHH-HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecC-CeEEEECCCCcch
Q psy10608 103 K-ANMKQLAENITEEQGKTLADAEGD-VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPL-GVTAGITPFNFPA 179 (445)
Q Consensus 103 ~-~~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~ 179 (445)
+ +++++|++++++|+|||+.+++.| +..+++.++|++..++.+.+........+...++.++|+ |||++|+|||||+
T Consensus 105 ~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 184 (533)
T TIGR01236 105 SGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTA 184 (533)
T ss_pred HhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHH
Confidence 9 599999999999999999999886 999999999999877665544321122345678899999 9999999999999
Q ss_pred hhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHH
Q psy10608 180 MIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKY 258 (445)
Q Consensus 180 ~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~ 258 (445)
.+..+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+ .+.++.|+.||+|++|+||||+++|+.
T Consensus 185 ~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~ 263 (533)
T TIGR01236 185 IAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKH 263 (533)
T ss_pred HHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHH
Confidence 99999999999 8999999999999999999999999999999999999994 678899999999999999999999999
Q ss_pred HHHHhhcCCCc------EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHH
Q psy10608 259 IYERGAKNGKR------VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRA 330 (445)
Q Consensus 259 i~~~aa~~~~~------~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~ 330 (445)
|++.++++++| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|++++
T Consensus 264 i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~ 342 (533)
T TIGR01236 264 LWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRL-YVPHSVWPRFKDELLAEL 342 (533)
T ss_pred HHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeE-EEchhHHHHHHHHHHHHH
Confidence 99999998874 99999999999999999999999999999999999999999999 7777 699999999999
Q ss_pred HhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC--CEEEeCCccce-----------------------------
Q psy10608 331 EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEG--ATLLLDGRNLK----------------------------- 379 (445)
Q Consensus 331 ~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G--a~~~~GG~~~~----------------------------- 379 (445)
+++++|+|.|+++++||++++++++++.++|++++++| |++++||....
T Consensus 343 ~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPV 422 (533)
T TIGR01236 343 AEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPV 422 (533)
T ss_pred hcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCe
Confidence 99999999999999999999999999999999999997 79999985310
Q ss_pred ---------------------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCC
Q psy10608 380 ---------------------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENH 407 (445)
Q Consensus 380 ---------------------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~ 407 (445)
||||..... ..+.+||||+|.||+|. +
T Consensus 423 l~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~ 501 (533)
T TIGR01236 423 LTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND-K 501 (533)
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc-c
Confidence 999975433 23578999999999983 4
Q ss_pred cchHHHHHHhheeEEEEeec
Q psy10608 408 FYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 408 ~~g~~~l~~~~~~k~v~~~~ 427 (445)
++|++||++|++.|+++...
T Consensus 502 ~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 502 AGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cCCHHHHHHhcceEEEEEEc
Confidence 68999999999999998654
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-80 Score=645.24 Aligned_cols=392 Identities=28% Similarity=0.453 Sum_probs=362.0
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 98 (494)
T PRK09847 19 ENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHA 98 (494)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 34689999999877778899999999999999999999999999999999997 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||+.++. .|+..+++.++|++...+...++..+ ...+...++.++|+|||++|+|||||+.+++++
T Consensus 99 ~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (494)
T PRK09847 99 EELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVAT-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWK 177 (494)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEecceeEEEEECCCccHHHHHHHH
Confidence 9999999999999999875 49999999999999887766665444 223445678999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..+++++.++|+|+|+||+|+| +.+.+..|+.||++|.|+||||+.+|+.|.+.++
T Consensus 178 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa 257 (494)
T PRK09847 178 LGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAG 257 (494)
T ss_pred HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5677899999999999999999999999999988
Q ss_pred -cCCCcEEEeCCCCCeeEecCCC-CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 265 -KNGKRVQSNMGAKNHGVIMSDA-NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 265 -~~~~~~~lElGGk~~~iV~~da-Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
.+++|+++|+|||||+||++|+ |+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+
T Consensus 258 ~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 336 (494)
T PRK09847 258 DSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRL-LLEESIADEFLALLKQQAQNWQPGHPLD 336 (494)
T ss_pred hhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 5899999999999999999997 999999999999999999999999999 7777 6999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-----------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK----------------------------------------- 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~----------------------------------------- 379 (445)
+++.+|||+++.+++++.++|++++++| ++++||....
T Consensus 337 ~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai 415 (494)
T PRK09847 337 PATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQAL 415 (494)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHH
Confidence 9999999999999999999999999999 9999885210
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++||+.|+|++.
T Consensus 416 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 416 QLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDG-DMTVPFGGYKQSGNG--RDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCcccccC--ccchHHHHHHhhceEEEEEe
Confidence 999986543 467899999999999 67999999999999999864
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-80 Score=644.62 Aligned_cols=384 Identities=32% Similarity=0.483 Sum_probs=357.4
Q ss_pred eecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy10608 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAEN 112 (445)
Q Consensus 33 ~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 112 (445)
||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999998766788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhh
Q psy10608 113 ITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191 (445)
Q Consensus 113 ~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALa 191 (445)
+++|+|||..++ ..|+..+++.++|++...+...+...+. ......+..++|+|||++|+|||||+.+.++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPL-PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccC-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 5699999999999998876665544331 11244678999999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcE
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~ 270 (445)
+||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .+.++.|+.||++++|+||||+++|+.|.+.+++++|++
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~ 239 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV 239 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence 9999999999999999999999999999999999999995 778899999999999999999999999999999999999
Q ss_pred EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCC
Q psy10608 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPV 348 (445)
Q Consensus 271 ~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 348 (445)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||+
T Consensus 240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 318 (467)
T TIGR01804 240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRV-FVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPL 318 (467)
T ss_pred EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCcc
Confidence 9999999999999999999999999999999999999999999 7777 699999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e------------------------------------------
Q psy10608 349 ISPQAKERILSLIQSGVDEGATLLLDGRNL-------K------------------------------------------ 379 (445)
Q Consensus 349 i~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~------------------------------------------ 379 (445)
+++.+.+++.++|++++++|+++++||... .
T Consensus 319 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 398 (467)
T TIGR01804 319 ISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARA 398 (467)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHH
Confidence 999999999999999999999999998531 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|
T Consensus 399 n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 399 NDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPY-PAEAPWGGYKQSGIG--RENGKAGLAEYTEVK 467 (467)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccCccC--CCChHHHHHHHhccC
Confidence 999986543 467899999999999 569999999999876
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-80 Score=648.31 Aligned_cols=396 Identities=30% Similarity=0.447 Sum_probs=362.1
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCC-CCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~-~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
+...++||||+|+.+ +.+++++||+ ||+++++++.++.+|++.++++|++||+.|+.+|..+|.++|+++++.|+++
T Consensus 30 ~~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 107 (511)
T TIGR01237 30 GKTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERR 107 (511)
T ss_pred ccccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 456678999999975 3568999999 5999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+++|++++++|+|||..+++.|+..+++.++||+...+...+...+....+...+++++|+|||++|+|||||+.+++++
T Consensus 108 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~ 187 (511)
T TIGR01237 108 RHELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGM 187 (511)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHH
Confidence 99999999999999999999999999999999998776665543322233456788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+| +.+.++.|+.||++++|+||||+++|+.|++.++
T Consensus 188 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa 267 (511)
T TIGR01237 188 TVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAA 267 (511)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5678899999999999999999999999999887
Q ss_pred ------cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcccc
Q psy10608 265 ------KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 265 ------~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG 336 (445)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|
T Consensus 268 ~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~L~~~~~~l~~g 346 (511)
T TIGR01237 268 KVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRV-VVLSPVYDAVVERFVEATRSLNVG 346 (511)
T ss_pred cccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEE-EEehhHHHHHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999999999999999999999 7777 699999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------e------------------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------K------------------------------ 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------~------------------------------ 379 (445)
+|.++++++||++++++++++.++|++++++| ++++||... .
T Consensus 347 ~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 347 PTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 99999999999999999999999999999999 799887420 0
Q ss_pred --------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhhee
Q psy10608 380 --------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTET 420 (445)
Q Consensus 380 --------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~ 420 (445)
|+||+.... ..+.+||||+|+||+|+ +++|++|+++||+.
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~~~~~ 504 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS-KAGGPDYLLQFMQP 504 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-cCCCHHHHHHhcce
Confidence 999986533 23468999999999995 36899999999999
Q ss_pred EEEEeec
Q psy10608 421 KTVTQLW 427 (445)
Q Consensus 421 k~v~~~~ 427 (445)
|+++.+|
T Consensus 505 k~v~~~~ 511 (511)
T TIGR01237 505 KTVTENI 511 (511)
T ss_pred EEEEEeC
Confidence 9998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-80 Score=643.87 Aligned_cols=389 Identities=33% Similarity=0.503 Sum_probs=361.0
Q ss_pred eecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy10608 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAEN 112 (445)
Q Consensus 33 ~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 112 (445)
||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999998766788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhc
Q psy10608 113 ITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIAC 192 (445)
Q Consensus 113 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaa 192 (445)
+++|+|||..+++.|+..+++.++|++.++....+...+....+...+.+++|+|||++|+|||||+.+.++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999887766655444322234567888999999999999999999999999999999
Q ss_pred CCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEE
Q psy10608 193 GNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQ 271 (445)
Q Consensus 193 GN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~ 271 (445)
||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+ .+.++.|+.||++++|+||||+++|+.|.+.++++++|++
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~ 240 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence 999999999999999999999999999999999999995 4577999999999999999999999999999999999999
Q ss_pred EeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCC
Q psy10608 272 SNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVI 349 (445)
Q Consensus 272 lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli 349 (445)
+|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++.+||++
T Consensus 241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 319 (468)
T cd07088 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERV-YVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLV 319 (468)
T ss_pred EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCccc
Confidence 999999999999999999999999999999999999999999 7887 6999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeCCccc----e----------------------------------------------
Q psy10608 350 SPQAKERILSLIQSGVDEGATLLLDGRNL----K---------------------------------------------- 379 (445)
Q Consensus 350 ~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----~---------------------------------------------- 379 (445)
++++++++.++|++++++||++++||... .
T Consensus 320 ~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 399 (468)
T cd07088 320 NEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSE 399 (468)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCC
Confidence 99999999999999999999999998521 0
Q ss_pred --------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 --------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 --------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
||||+.... ....||||+|.||+| +++|++|+++||+.|+|++
T Consensus 400 ~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~k~SG~G--~~~g~~~l~~~t~~k~v~~ 468 (468)
T cd07088 400 YGLTSYIYTENLNTAMRATNELEFGETYINRENFE-AMQGFHAGWKKSGLG--GADGKHGLEEYLQTKVVYL 468 (468)
T ss_pred CCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccccCC--cCchHHHHHHHhceeEEeC
Confidence 999987543 345699999999999 5699999999999999863
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-80 Score=643.26 Aligned_cols=388 Identities=32% Similarity=0.473 Sum_probs=358.6
Q ss_pred eeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
+||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+. |+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 589999998766678999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccC-ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 110 AENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQG-ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
++++++|+|||..++.. |+..+++.+++|+...+...+ +..+ ...+...+..++|+|||++|+|||||+.+.+++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~ 159 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRP-GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIA 159 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHH
Confidence 99999999999987754 999999999999987655433 2222 12244567899999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
+||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|+.+.+..|+.|++++.|+||||+.+|+.|++.+++++
T Consensus 160 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~ 239 (471)
T cd07139 160 PALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERL 239 (471)
T ss_pred HHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999997778899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 240 ~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 240 ARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRI-LVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e-----------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K----------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~----------------------------------------- 379 (445)
|||+++++++++.++|++++++||++++||... .
T Consensus 319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 398 (471)
T cd07139 319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence 999999999999999999999999999988521 0
Q ss_pred -------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 -------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 -------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++. ..+.+||||+|.||+| +++|++|+++||+.|+|++
T Consensus 399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G--~~~g~~~~~~ft~~k~i~~ 471 (471)
T cd07139 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR--LDFGAPFGGFKQSGIG--REGGPEGLDAYLETKSIYL 471 (471)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC--CCCCCCCCCcccccCC--ccchHHHHHHHhceeEEeC
Confidence 9999865 3467999999999999 6799999999999999863
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=642.03 Aligned_cols=391 Identities=28% Similarity=0.376 Sum_probs=354.8
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
.+||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~-~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 2 TLWINGDWIAGQ-GEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred CceECCEEecCC-CCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 479999998763 5679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||..+++.|+..+++.++|++.......+.... ...+...+++++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 159 (487)
T PRK09457 81 EVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRS-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPAL 159 (487)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999887655433333322 22344568899999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC-CCc
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN-GKR 269 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~-~~~ 269 (445)
++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.+..|+.||++++|+||||+++|+.|+++++.+ .++
T Consensus 160 aaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 239 (487)
T PRK09457 160 LAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI 239 (487)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence 9999999999999999999999999999999999999999878889999999999999999999999999987754 578
Q ss_pred EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--c-chHHHHHHHHHHhccccCCC-CCCCCC
Q psy10608 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--A-VEWLPELKKRAEALKVSAGN-VPGTDL 345 (445)
Q Consensus 270 ~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~-~~f~~~l~~~~~~l~vG~p~-~~~~~~ 345 (445)
++||||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ + |+|+++|+++++++++|||+ ++.+++
T Consensus 240 ~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~ 318 (487)
T PRK09457 240 LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRL-LVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFM 318 (487)
T ss_pred EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceE-EEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCcc
Confidence 89999999999999999999999999999999999999999999 7777 6 99999999999999999996 678999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-------ce---------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRN-------LK--------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-------~~--------------------------------------- 379 (445)
|||++.++++++.++|++++++|+++++||.. +.
T Consensus 319 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~ 398 (487)
T PRK09457 319 GAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANN 398 (487)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999997642 10
Q ss_pred ----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||+......+.+||||+|+||+| +++|..+ .+|++.|++++..
T Consensus 399 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 399 TRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNH--RPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCC--CCCchhH-hhheeeeEEEEec
Confidence 9999765444467899999999999 5688555 5599999999875
|
|
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-80 Score=647.17 Aligned_cols=395 Identities=21% Similarity=0.271 Sum_probs=358.6
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHH-
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKA- 104 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~- 104 (445)
+.+.++||+|+|+.+ +.+++++||+| |+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++
T Consensus 30 ~~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 107 (522)
T cd07123 30 TVEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGK 107 (522)
T ss_pred ccccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhh
Confidence 345789999999965 46899999995 99999999999999999999999999999999999999999999999996
Q ss_pred hHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecC-CeEEEECCCCcchhhh
Q psy10608 105 NMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPL-GVTAGITPFNFPAMIP 182 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~ 182 (445)
++++|++++++|+|||+.+++. |+..+++.++|++..+..+.+........+...++.++|+ |||++|+|||||+.+.
T Consensus 108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 8999999999999999999865 8899999999999876655443322122245578899998 9999999999999999
Q ss_pred HhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 183 LWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 183 ~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
.+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+++|+.|++
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 6999999999999999999999999999999999999995 467899999999999999999999999999
Q ss_pred HhhcCCC------cEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhc
Q psy10608 262 RGAKNGK------RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEAL 333 (445)
Q Consensus 262 ~aa~~~~------~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l 333 (445)
.++++++ ++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| |||+ +|+|+++|+++++++
T Consensus 267 ~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l 345 (522)
T cd07123 267 QIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRA-YVPESLWPEVKERLLEELKEI 345 (522)
T ss_pred HHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE-EEcHHHHHHHHHHHHHHHhhC
Confidence 9998887 899999999999999999999999999999999999999999999 8887 699999999999999
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEeCCccc-----e----------------------------
Q psy10608 334 KVSAGNVPGTDLGPVISPQAKERILSLIQSGVDE-GATLLLDGRNL-----K---------------------------- 379 (445)
Q Consensus 334 ~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~~~GG~~~-----~---------------------------- 379 (445)
++|+|.|+++++|||+++++++++.++|++++++ ||++++||... .
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 425 (522)
T cd07123 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY 425 (522)
T ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence 9999999999999999999999999999999999 99999998531 0
Q ss_pred -----------------------------------------------EEEeCCCCCC-CCCCccCCCCCCccCCCCcchH
Q psy10608 380 -----------------------------------------------VGINVPIPVP-LSMFSFTGSRGSFLGENHFYGK 411 (445)
Q Consensus 380 -----------------------------------------------V~iN~~~~~~-~~~~pfGG~k~SG~G~~~~~g~ 411 (445)
||||+..... .+.+||||+|+||+|. +++|+
T Consensus 426 ~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg-~~~g~ 504 (522)
T cd07123 426 VYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND-KAGSP 504 (522)
T ss_pred EeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc-ccCCH
Confidence 9999764332 3568999999999952 46999
Q ss_pred HHHHHhheeEEEEee
Q psy10608 412 QGFYFYTETKTVTQL 426 (445)
Q Consensus 412 ~~l~~~~~~k~v~~~ 426 (445)
+++++|++.|+++..
T Consensus 505 ~~l~~~~~~k~~~~~ 519 (522)
T cd07123 505 LNLLRWVSPRTIKET 519 (522)
T ss_pred HHHHHhcceEEEEEe
Confidence 999999999999754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-79 Score=638.77 Aligned_cols=383 Identities=33% Similarity=0.480 Sum_probs=355.8
Q ss_pred eeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAE 111 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 111 (445)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999876678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 112 NITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 112 ~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
++++|+|||..+++. |+..+++.+++++...+...+... ....+..++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 999999999998864 999999999999877655433211 23457789999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCc
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 269 (445)
++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|+ .+.++.|+.||+++.|+||||+++|+.|.+.++.+++|
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~ 235 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence 99999999999999999999999999999999999999985 46789999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCC
Q psy10608 270 VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGP 347 (445)
Q Consensus 270 ~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gp 347 (445)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||+++++++||
T Consensus 236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 314 (466)
T cd07138 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRM-LVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGP 314 (466)
T ss_pred EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEE-EEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999 7777 69999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--------ce----------------------------------------
Q psy10608 348 VISPQAKERILSLIQSGVDEGATLLLDGRN--------LK---------------------------------------- 379 (445)
Q Consensus 348 li~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--------~~---------------------------------------- 379 (445)
++++++++++.++|++++++||++++||.. ..
T Consensus 315 li~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 394 (466)
T cd07138 315 LASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIA 394 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHH
Confidence 999999999999999999999999999841 00
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+.. ..+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 395 n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 395 NDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA--FNPGAPFGGYKQSGNG--REWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC--CCCCCCcCCcccccCC--ccchHHHHHHhcceeEEe
Confidence 9999853 2467899999999999 569999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=639.67 Aligned_cols=382 Identities=29% Similarity=0.471 Sum_probs=355.2
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
.....++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++
T Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 97 (480)
T cd07111 18 HDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKH 97 (480)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 34566889999999876677899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 106 MKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
+++|++++++|+|||+.+++. |+..+++.+++++.+.+...+ .+..++|+|||++|+|||||+.+.++
T Consensus 98 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~~~~ 166 (480)
T cd07111 98 QRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLMLAW 166 (480)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHHHHH
Confidence 999999999999999999985 999999999988766543321 23457999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+.+.+..|+.||+++.|+||||+.+|+.|.+.++
T Consensus 167 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa 246 (480)
T cd07111 167 KICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATA 246 (480)
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++
T Consensus 247 ~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri-~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 325 (480)
T cd07111 247 GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRL-LVQESVAEELIRKLKERMSHLRVGDPLDKA 325 (480)
T ss_pred ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 7887 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------e----------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------K---------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------~---------------------------------- 379 (445)
+++||++++.+++++.++|++++++|+++++||... .
T Consensus 326 ~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~ 405 (480)
T cd07111 326 IDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVA 405 (480)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHH
Confidence 999999999999999999999999999999987521 0
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+
T Consensus 406 ~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 406 LANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLF-DAAAGFGGYRESGFG--REGGKEGLYEYLRPSW 477 (480)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCC-CCCCCcCCcccccCC--ccchHHHHHHHhhccC
Confidence 999987554 467899999999999 6799999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-79 Score=641.89 Aligned_cols=394 Identities=32% Similarity=0.458 Sum_probs=359.4
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCC-CCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~-~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
....++||||+|+.+ +.+++++||+ ||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++
T Consensus 34 ~~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 34 GQDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 455678999999965 4679999999 6999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCccccc-CccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ-GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
+++|++++++|+|||..+++.|+..+++.++||+..+.... ++... ...+...+++++|+|||++|+|||||+.++++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVE-SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999997765543 33222 12445678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+|+ .+.+..|+.||++++|+||||+++|+.|++.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999994 57789999999999999999999999999998
Q ss_pred hc------CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc
Q psy10608 264 AK------NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV 335 (445)
Q Consensus 264 a~------~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v 335 (445)
++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~v~d~f~~~l~~~~~~l~~ 349 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRA-IVHEDVYDEVLEKVVELTKELTV 349 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEE-EEeHHHHHHHHHHHHHHHHhCCC
Confidence 86 789999999999999999999999999999999999999999999999 7777 69999999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------
Q psy10608 336 SAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------ 379 (445)
Q Consensus 336 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------ 379 (445)
|+|.+++ ++||++++.+++++.++|++++++ +++++||....
T Consensus 350 g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 427 (514)
T PRK03137 350 GNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427 (514)
T ss_pred CCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence 9999988 999999999999999999999987 59999985210
Q ss_pred ---------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhhe
Q psy10608 380 ---------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTE 419 (445)
Q Consensus 380 ---------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~ 419 (445)
|+||+.... ..+.+||||+|.||+|+ +++|++++++||+
T Consensus 428 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~~gg~~~l~~ft~ 506 (514)
T PRK03137 428 DFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS-KAGGPDYLLLFLQ 506 (514)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc-ccCCHHHHHHhce
Confidence 999975432 23568999999999995 3689999999999
Q ss_pred eEEEEeec
Q psy10608 420 TKTVTQLW 427 (445)
Q Consensus 420 ~k~v~~~~ 427 (445)
.|+|+..|
T Consensus 507 ~k~v~~~~ 514 (514)
T PRK03137 507 AKTVSEMF 514 (514)
T ss_pred EEEEEEeC
Confidence 99998653
|
|
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-79 Score=636.41 Aligned_cols=395 Identities=25% Similarity=0.404 Sum_probs=357.8
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+.++++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 13 ~~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 92 (496)
T PLN00412 13 GDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHK 92 (496)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 36678999999998766788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCccccc--Cccccc-----cCCCCceeEEEecCCeEEEECCCCcch
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ--GETLAG-----VAKDMDIHSYRVPLGVTAGITPFNFPA 179 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~--~~~~~~-----~~~~~~~~~~~~P~GVv~~I~p~N~P~ 179 (445)
++|++++++|+|||..+++.|+..+++.++|++..+.... +..+.. ...+...+.+++|+|||++|+|||||+
T Consensus 93 ~el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~ 172 (496)
T PLN00412 93 APIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172 (496)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchH
Confidence 9999999999999999999999999999999986544332 222211 011224568899999999999999999
Q ss_pred hhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHH
Q psy10608 180 MIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKY 258 (445)
Q Consensus 180 ~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~ 258 (445)
.++++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.+..|..||+++.|+|||| .+|+.
T Consensus 173 ~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~ 251 (496)
T PLN00412 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIA 251 (496)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHH
Confidence 9999999999999999999999999999999999999999999999999984 577899999999999999999 99999
Q ss_pred HHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcccc
Q psy10608 259 IYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 259 i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG 336 (445)
|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|
T Consensus 252 v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g 328 (496)
T PLN00412 252 ISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVV-LVMESVADALVEKVNAKVAKLTVG 328 (496)
T ss_pred HHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEE-EEcHHHHHHHHHHHHHHHHhCccC
Confidence 999875 79999999999999999999999999999999999999999999999 7787 699999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------- 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------- 379 (445)
+|.+ ++++||++++++++++.++|++++.+||++++||....
T Consensus 329 ~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~de 407 (496)
T PLN00412 329 PPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 407 (496)
T ss_pred CCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHH
Confidence 9977 78999999999999999999999999999999874200
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++.....+.+||||+|.||+| +++|++|+++||+.|+++
T Consensus 408 ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~i~ 485 (496)
T PLN00412 408 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIG--SQGITNSINMMTKVKSTV 485 (496)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccC--CCChHHHHHHhcceEEEE
Confidence 9999875433357899999999999 569999999999999998
Q ss_pred eecc
Q psy10608 425 QLWR 428 (445)
Q Consensus 425 ~~~~ 428 (445)
++++
T Consensus 486 ~~~~ 489 (496)
T PLN00412 486 INLP 489 (496)
T ss_pred EecC
Confidence 7753
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-79 Score=632.92 Aligned_cols=389 Identities=27% Similarity=0.380 Sum_probs=353.3
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
..+||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++|| +.++..+|.++|++++++|++++++|
T Consensus 4 ~~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~el 78 (472)
T TIGR03250 4 EALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEI 78 (472)
T ss_pred CCceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 468999999863 5679999999999999999999999999999999876 56899999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccc----cCCCCceeEEEecC-CeEEEECCCCcchhhhHh
Q psy10608 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG----VAKDMDIHSYRVPL-GVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~~~ 184 (445)
++++++|+|||..+++.|+..+++.++||+.......++..+. ...+...++.++|+ |||++|+|||||+.++++
T Consensus 79 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~ 158 (472)
T TIGR03250 79 SDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAH 158 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHH
Confidence 9999999999999999999999999999998766555443210 11233567899998 999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .+.+..|+.||++++|+||||+.+|+.|++.+
T Consensus 159 ~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 238 (472)
T TIGR03250 159 KIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARA 238 (472)
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999984 67789999999999999999999999999987
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++
T Consensus 239 ~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 315 (472)
T TIGR03250 239 G--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRM-LVQESVADRFTELLVEKTRAWRYGDPMDP 315 (472)
T ss_pred c--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEE-EEeHhHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 5 68999999999999999999999999999999999999999999999 7787 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++++|||++++++++++++|++++++||++++||....
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (472)
T TIGR03250 316 SVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRIS 395 (472)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999985210
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||+......+.+||||+|+||+|+ +++|++|+++||+.|++++.|
T Consensus 396 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~-~~g~~~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 396 NSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY-KEGVQEAMKSFTNLKTYSLPW 472 (472)
T ss_pred hCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC-CCChHHHHHHhhceEEEEEeC
Confidence 99997654433558999999999995 357899999999999998764
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-78 Score=634.16 Aligned_cols=390 Identities=29% Similarity=0.377 Sum_probs=354.0
Q ss_pred eeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAE 111 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 111 (445)
+||+|+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 5899999875 467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhh
Q psy10608 112 NITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191 (445)
Q Consensus 112 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALa 191 (445)
++++|+|||..+++.|+..+++.++|++.......++... ...+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa 158 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESEN-PMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 158 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999877655444343322 122345678899999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC-CCcE
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN-GKRV 270 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~-~~~~ 270 (445)
+||+||+|||+.+|.++..+++++.++|+|+|+||+|+|+.+.++.|+.||++|+|+||||+++|+.|++.++++ .+++
T Consensus 159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~ 238 (484)
T TIGR03240 159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKIL 238 (484)
T ss_pred cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcE
Confidence 999999999999999999999999999999999999999878889999999999999999999999999987765 6889
Q ss_pred EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--c-chHHHHHHHHHHhccccCC-CCCCCCCC
Q psy10608 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--A-VEWLPELKKRAEALKVSAG-NVPGTDLG 346 (445)
Q Consensus 271 ~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~-~~f~~~l~~~~~~l~vG~p-~~~~~~~G 346 (445)
+||+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ + |+|+++|.++++++++|+| .++++++|
T Consensus 239 ~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~g 317 (484)
T TIGR03240 239 ALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRL-LVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMG 317 (484)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEeccccHHHHHHHHHHHHHhcccCCCCcCCCCccc
Confidence 9999999999999999999999999999999999999999999 7776 4 9999999999999999997 47788999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-----------------------------------------------
Q psy10608 347 PVISPQAKERILSLIQSGVDEGATLLLDGRNLK----------------------------------------------- 379 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~----------------------------------------------- 379 (445)
||+++++++++.++|++++++|+++++||....
T Consensus 318 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~ 397 (484)
T TIGR03240 318 AVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNT 397 (484)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999999998764210
Q ss_pred ---------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ---------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ---------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|+||+| +++|.++++ |++.|+++++.
T Consensus 398 ~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 398 RFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNH--RPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCC--CCCchHHHh-heeeeEEEEec
Confidence 9999765444467899999999999 568977766 99999999886
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-79 Score=637.00 Aligned_cols=396 Identities=30% Similarity=0.442 Sum_probs=361.7
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCC-CCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKA 104 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~-~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 104 (445)
.+...++||+|+|+.+ +.+++++||. ||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++
T Consensus 15 ~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 92 (500)
T cd07083 15 FGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRR 92 (500)
T ss_pred ccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 3667789999999975 4578999998 699999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccc-ccCCCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 105 NMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA-GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
++++|++++++|+|||+.++..|+..+++.++||+..+....+.... ....+...++.++|+|||++|+|||||+.+.+
T Consensus 93 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~ 172 (500)
T cd07083 93 RRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFT 172 (500)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHH
Confidence 99999999999999999999999999999999999877665543221 12234567888999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
+++++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+| +.+.++.|+.||+++.|+||||+.+|+.|.+.
T Consensus 173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 173 GMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 56788999999999999999999999999999
Q ss_pred hhcCC------CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcc
Q psy10608 263 GAKNG------KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALK 334 (445)
Q Consensus 263 aa~~~------~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~ 334 (445)
+++++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|++++++++
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~ 331 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRL-ILTQGAYEPVLERLLKRAERLS 331 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeE-EEcHHHHHHHHHHHHHHHHcCC
Confidence 98886 9999999999999999999999999999999999999999999999 7787 6999999999999999
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-----------------------------------
Q psy10608 335 VSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK----------------------------------- 379 (445)
Q Consensus 335 vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~----------------------------------- 379 (445)
+|+|.++++++||++++.+++++.++|++++++| ++++||....
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 410 (500)
T cd07083 332 VGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRY 410 (500)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999987 8999985310
Q ss_pred ------------------------------------------EEEeCCCCCC-CCCCccCCCCCCccCCCCcchHHHHHH
Q psy10608 380 ------------------------------------------VGINVPIPVP-LSMFSFTGSRGSFLGENHFYGKQGFYF 416 (445)
Q Consensus 380 ------------------------------------------V~iN~~~~~~-~~~~pfGG~k~SG~G~~~~~g~~~l~~ 416 (445)
|+||+..... .+.+||||+|.||+|+ +++|++++++
T Consensus 411 ~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~ 489 (500)
T cd07083 411 KDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA-KTGGPHYLRR 489 (500)
T ss_pred CCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC-cccCHHHHHH
Confidence 9999864432 2468999999999995 3589999999
Q ss_pred hheeEEEEee
Q psy10608 417 YTETKTVTQL 426 (445)
Q Consensus 417 ~~~~k~v~~~ 426 (445)
||+.|+++..
T Consensus 490 ~~~~k~~~~~ 499 (500)
T cd07083 490 FLEMKAVAER 499 (500)
T ss_pred hhheeEEEEc
Confidence 9999999753
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-79 Score=631.41 Aligned_cols=374 Identities=26% Similarity=0.376 Sum_probs=344.8
Q ss_pred EeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 48 DLHNPATNEVVTRVPKATPAEMESAVASAKKAYET-WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 48 ~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
+++||+||+++++++.++.+|+++++++|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899999999999999999999999999999998 56799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCcccccc----CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGV----AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~ 202 (445)
|+..+++.++|++.......+...+.. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999987665554432211 1234567899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEe
Q psy10608 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVI 282 (445)
Q Consensus 203 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV 282 (445)
.+|.++..++++|.++|+|+|++|+|+|+.+.++.|+.||++++|+||||+++|+.|++.++. .+|+++|+|||||+||
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV 240 (455)
T cd07148 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIV 240 (455)
T ss_pred cccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEE
Confidence 999999999999999999999999999977888999999999999999999999999999886 4999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHH
Q psy10608 283 MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSL 360 (445)
Q Consensus 283 ~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~ 360 (445)
++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++|||+++.+++++.++
T Consensus 241 ~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 319 (455)
T cd07148 241 DRSADLDAMIPPLVKGGFYHAGQVCVSVQRV-FVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEW 319 (455)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCccCCeEE-EEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999 7777 699999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCccce-------------------------------------------------------------
Q psy10608 361 IQSGVDEGATLLLDGRNLK------------------------------------------------------------- 379 (445)
Q Consensus 361 i~~a~~~Ga~~~~GG~~~~------------------------------------------------------------- 379 (445)
|++++++||++++||....
T Consensus 320 i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~ 399 (455)
T cd07148 320 VNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDV 399 (455)
T ss_pred HHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 9999999999999985310
Q ss_pred ------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++.....+.+||||+|+||+| +++|++|+++|++.|++++
T Consensus 400 ~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 400 ALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG--TGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccC--CCchHHHHHHhhceeEEeC
Confidence 9999876444356899999999999 6799999999999999863
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-79 Score=631.40 Aligned_cols=369 Identities=32% Similarity=0.510 Sum_probs=344.0
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 128 (445)
++||+||+++++++.++.+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHH
Q psy10608 129 LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~ 208 (445)
..+++.++|++...+...+...+....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999999776666555443222344557789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcceEEEeCC--hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 209 MMLVDMLTQAGCPPGVVNVIHGA--HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 209 ~~l~~~l~~aGlP~gvv~vv~g~--~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
..++++|.++|+|+|++|+|+|+ .+.++.|+.||++++|+||||+.+|+.|++.++.+++|+++|+|||||+||++||
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da 240 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence 99999999999999999999985 5678999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
|+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 319 (448)
T TIGR01780 241 DIDQAVEGAMASKFRNAGQTCVCANRL-YVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADA 319 (448)
T ss_pred CHHHHHHHHHHHHHHhcCCcccCCcee-echHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 8887 6999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCccc-----e------------------------------------------------------------
Q psy10608 365 VDEGATLLLDGRNL-----K------------------------------------------------------------ 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~~-----~------------------------------------------------------------ 379 (445)
+++||++++||... .
T Consensus 320 ~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~ 399 (448)
T TIGR01780 320 VEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIW 399 (448)
T ss_pred HHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHH
Confidence 99999999999531 0
Q ss_pred ----------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 ----------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 ----------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
||||++... .+..||||+|+||+| +++|++|+++|++.|
T Consensus 400 ~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 400 RVAEALEYGMVGINTGLIS-NVVAPFGGVKQSGLG--REGSKYGIEEYLETK 448 (448)
T ss_pred HHHHhCCccEEEECCCCCC-CCCCCCCCcccccCC--ccchHHHHHHHhccC
Confidence 999987543 467899999999999 569999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-79 Score=631.62 Aligned_cols=376 Identities=31% Similarity=0.489 Sum_probs=348.2
Q ss_pred EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 47 ~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCccccccC----CCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGVA----KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~ 202 (445)
|+..+++.++|+++..+++.++..+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999876665554332111 133467889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeE
Q psy10608 203 RDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281 (445)
Q Consensus 203 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~i 281 (445)
.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.||++++|+||||+++|+.|.+.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i 240 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence 9999999999999999999999999999 467789999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHH
Q psy10608 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILS 359 (445)
Q Consensus 282 V~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~ 359 (445)
|++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||++++.+++++.+
T Consensus 241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 319 (456)
T cd07145 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRI-LVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMEN 319 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCccCeeE-EEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999 8887 69999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCccc-e-----------------------------------------------------------
Q psy10608 360 LIQSGVDEGATLLLDGRNL-K----------------------------------------------------------- 379 (445)
Q Consensus 360 ~i~~a~~~Ga~~~~GG~~~-~----------------------------------------------------------- 379 (445)
+|++++++|+++++||... .
T Consensus 320 ~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~ 399 (456)
T cd07145 320 LVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDIN 399 (456)
T ss_pred HHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999999999998521 0
Q ss_pred -------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 -------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 -------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||+......+.+||||+|+||+| +++|++||++|++.|++++
T Consensus 400 ~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 400 RALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG--REGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC--cCchHHHHHHhhceeEEeC
Confidence 9999865443357899999999999 6799999999999999863
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-78 Score=632.54 Aligned_cols=385 Identities=21% Similarity=0.286 Sum_probs=342.9
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKA-YETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
+++||||+|+.+. +++++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|..+|.++|+++++.|++++++
T Consensus 1 ~~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~ 78 (513)
T cd07128 1 LQSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKED 78 (513)
T ss_pred CceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999864 5789999999999999999876 8999999999997 79999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccC--------ccccccCCC-CceeEEEec-CCeEEEECCCCcc
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG--------ETLAGVAKD-MDIHSYRVP-LGVTAGITPFNFP 178 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVv~~I~p~N~P 178 (445)
|+++ +.|+|||+.+++.|+..+++.++||++.++...+ +..+....+ ...++.++| +|||++|+|||||
T Consensus 79 la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 79 LYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred HHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccH
Confidence 9996 9999999999999999999999999987665432 222211112 235678999 5999999999999
Q ss_pred hhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC-CCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHH
Q psy10608 179 AMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG-CPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAG 256 (445)
Q Consensus 179 ~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g 256 (445)
+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|+. +.+..| +.+++|+||||+++|
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G 234 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATA 234 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 9999999999853 333332 578999999999999
Q ss_pred HHHHHHh--hcCCCcEEEeCCCCCeeEecCCCC-----HHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHH
Q psy10608 257 KYIYERG--AKNGKRVQSNMGAKNHGVIMSDAN-----RSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELK 327 (445)
Q Consensus 257 ~~i~~~a--a~~~~~~~lElGGk~~~iV~~daD-----l~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~ 327 (445)
+.|++.+ +++++|+++|||||||+||++||| +|.+++.+++++|.|+||.|++++|+ +||+ +|+|+++|+
T Consensus 235 ~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv-~V~~~i~d~f~~~l~ 313 (513)
T cd07128 235 AKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRA-FVPEARVDAVIEALK 313 (513)
T ss_pred HHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceE-EEehHHHHHHHHHHH
Confidence 9999985 488999999999999999999999 99999999999999999999999999 7787 699999999
Q ss_pred HHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----------e------------------
Q psy10608 328 KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----------K------------------ 379 (445)
Q Consensus 328 ~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----------~------------------ 379 (445)
++++++++|+|.++++++|||+++.+++++.++|++|+++ |++++||... .
T Consensus 314 ~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 392 (513)
T cd07128 314 ARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATA 392 (513)
T ss_pred HHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccch
Confidence 9999999999999999999999999999999999999988 9999998430 0
Q ss_pred ----------------------------------------------------------EEEeCCCC--------CCCCCC
Q psy10608 380 ----------------------------------------------------------VGINVPIP--------VPLSMF 393 (445)
Q Consensus 380 ----------------------------------------------------------V~iN~~~~--------~~~~~~ 393 (445)
||||+... ...+.+
T Consensus 393 i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~ 472 (513)
T cd07128 393 VHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQL 472 (513)
T ss_pred HHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCC
Confidence 99997531 224578
Q ss_pred ccCCCCCCccCCCCc-chHHHHHHhheeEEEE
Q psy10608 394 SFTGSRGSFLGENHF-YGKQGFYFYTETKTVT 424 (445)
Q Consensus 394 pfGG~k~SG~G~~~~-~g~~~l~~~~~~k~v~ 424 (445)
||||+|.||+| ++ +|.+|+++|++.|+|.
T Consensus 473 pfGG~k~SG~G--~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 473 VHGGPGRAGGG--EELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCcccCCCC--cccccHHHHHHhheeeeee
Confidence 99999999999 45 4799999999999985
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-78 Score=648.12 Aligned_cols=387 Identities=20% Similarity=0.275 Sum_probs=345.1
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKA-YETWSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
++||||+|+.+. +++++++||+||+++++++.++ .|+++|+++|++| |+.|+++|..+|.++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 79 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL 79 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999764 5689999999999999999999 5999999999996 999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhHHHHHHHHHHHHHccCccccc--------CccccccCC-CCceeEEEecC-CeEEEECCCCcch
Q psy10608 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ--------GETLAGVAK-DMDIHSYRVPL-GVTAGITPFNFPA 179 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~~-~~~~~~~~~P~-GVv~~I~p~N~P~ 179 (445)
++ +++|+|||+.+++.|+..+++.++||+..++... ++..+.... +...++.++|+ |||++|+|||||+
T Consensus 80 a~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 80 YA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred HH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHH
Confidence 99 5999999999999999999999999998776521 333331111 22467899998 9999999999999
Q ss_pred hhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC-CCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHH
Q psy10608 180 MIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG-CPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKY 258 (445)
Q Consensus 180 ~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 258 (445)
.++++++++||++||+||+|||+.+|+++..|+++|.++| +|+|+||+|+|+. ++.+..++++++|+||||+++|+.
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~~~~~~~~~~~V~FTGS~~~G~~ 236 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GDLLDHLDHRDVVAFTGSAATADR 236 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999999999999 9999999999852 222333477899999999999999
Q ss_pred HHHHh--hcCCCcEEEeCCCCCeeEecCCCC-----HHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHH
Q psy10608 259 IYERG--AKNGKRVQSNMGAKNHGVIMSDAN-----RSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKR 329 (445)
Q Consensus 259 i~~~a--a~~~~~~~lElGGk~~~iV~~daD-----l~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~ 329 (445)
|++.+ +++++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++
T Consensus 237 i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv-~V~~~i~d~f~~~l~~~ 315 (663)
T TIGR02278 237 LRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRV-IVPKALLEAVLKALQAR 315 (663)
T ss_pred HHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceE-EEeHHHHHHHHHHHHHH
Confidence 99874 478999999999999999999999 99999999999999999999999999 7887 69999999999
Q ss_pred HHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------
Q psy10608 330 AEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------ 379 (445)
Q Consensus 330 ~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------ 379 (445)
++++++|+|.++++++||||+++++++++++|++|+++||++++||....
T Consensus 316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl 395 (663)
T TIGR02278 316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVA 395 (663)
T ss_pred HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeE
Confidence 99999999999999999999999999999999999999999999985310
Q ss_pred -----------------------------------------------EEE-eCC-------CCCCCCCCccCCCCCCccC
Q psy10608 380 -----------------------------------------------VGI-NVP-------IPVPLSMFSFTGSRGSFLG 404 (445)
Q Consensus 380 -----------------------------------------------V~i-N~~-------~~~~~~~~pfGG~k~SG~G 404 (445)
||| |.. .....+.+||||+|+||+|
T Consensus 396 ~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G 475 (663)
T TIGR02278 396 TFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGG 475 (663)
T ss_pred EEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCC
Confidence 999 641 1122356899999999999
Q ss_pred CCCc-chHHHHHHhheeEEEEe
Q psy10608 405 ENHF-YGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 405 ~~~~-~g~~~l~~~~~~k~v~~ 425 (445)
++ +|.+++++|++.|+|..
T Consensus 476 --~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 476 --EELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred --CccchHHHHHHhceeEEEEc
Confidence 55 46899999999999875
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-78 Score=627.33 Aligned_cols=371 Identities=28% Similarity=0.406 Sum_probs=345.5
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
++||+||+++++++.++.+|+++|+++|++||+. |+. +..+|.++|++++++|++|+++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChH
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~ 206 (445)
|+..+++.++||+...+...+...+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIE-PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccc-cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 9999999999999887766554433 223456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 207 ACMMLVDMLTQ-AGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 207 ~~~~l~~~l~~-aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
++..++++|.+ +|+|+|++|+|+| +.+.++.|+.||+++.|+||||+++|+.|++.+++++|++++|+|||||+||++
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~ 238 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD 238 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence 99999999999 7999999999998 467789999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~ 362 (445)
|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.++++++++|+
T Consensus 239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 317 (455)
T cd07120 239 DADLDAALPKLERALTIFAGQFCMAGSRV-LVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE 317 (455)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 7787 69999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcc--------ce-------------------------------------------------------
Q psy10608 363 SGVDEGATLLLDGRN--------LK------------------------------------------------------- 379 (445)
Q Consensus 363 ~a~~~Ga~~~~GG~~--------~~------------------------------------------------------- 379 (445)
+++++|+++++||.. ..
T Consensus 318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d 397 (455)
T cd07120 318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD 397 (455)
T ss_pred HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 999999999997631 00
Q ss_pred ---------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ---------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ---------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|++++
T Consensus 398 ~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 398 LARAMRVARAIRAGTVWINDWNKL-FAEAEEGGYRQSGLG--RLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred HHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCccccccC--ccchHHHHHHHhceeEEeC
Confidence 999987654 467899999999999 5689999999999999863
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-78 Score=627.19 Aligned_cols=375 Identities=31% Similarity=0.479 Sum_probs=349.7
Q ss_pred EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 47 ~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChH
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~ 206 (445)
|+..+++.+++++...+...+...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999988776665554442224556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCC
Q psy10608 207 ACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285 (445)
Q Consensus 207 ~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 285 (445)
++..++++|.++|+|+|+||+|+| +.+.++.|+.|+++++|+||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 240 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence 999999999999999999999998 4677899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy10608 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQS 363 (445)
Q Consensus 286 aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 363 (445)
||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++++++++.+++++
T Consensus 241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 319 (451)
T cd07150 241 ADLDYAVRAAAFGAFMHQGQICMSASRI-IVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVED 319 (451)
T ss_pred CChHHHHHHHHHHHHhhcCCCCCCCeeE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 8887 599999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCccce----------------------------------------------------------------
Q psy10608 364 GVDEGATLLLDGRNLK---------------------------------------------------------------- 379 (445)
Q Consensus 364 a~~~Ga~~~~GG~~~~---------------------------------------------------------------- 379 (445)
++++|+++++||....
T Consensus 320 a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~ 399 (451)
T cd07150 320 AVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKL 399 (451)
T ss_pred HHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHH
Confidence 9999999999985200
Q ss_pred --------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 --------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 --------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+++....+.+||||+|+||+| +++|++|+++||+.|+|+
T Consensus 400 ~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 400 AERLESGMVHINDPTILDEAHVPFGGVKASGFG--REGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHhcCcCEEEECCCCCCCCCCCCcCCccccccC--cCCcHHHHHHhheeeEEe
Confidence 9999876544467899999999999 569999999999999986
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-78 Score=626.23 Aligned_cols=372 Identities=31% Similarity=0.462 Sum_probs=346.9
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 128 (445)
++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHH
Q psy10608 129 LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~ 208 (445)
..+++.++|++....++.++..+ ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIP-VGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCcccc-CCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 99999999999877766665544 22344567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCC
Q psy10608 209 MMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDAN 287 (445)
Q Consensus 209 ~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daD 287 (445)
..+++++.++ +|+|+||+|+|+ .+.++.|+.||++++|+||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dad 238 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCC
Confidence 9999999995 999999999985 45789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-hcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 288 RSNTLNQLVGAA-FGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 288 l~~a~~~iv~~~-f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
+|.|++.+++++ |.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++|
T Consensus 239 l~~Aa~~i~~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a 317 (456)
T cd07107 239 PEAAADAAVAGMNFTWCGQSCGSTSRL-FVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSA 317 (456)
T ss_pred HHHHHHHHHHhchhhcCCCCCcCCcEE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHH
Confidence 999999999995 99999999999999 7787 5999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCccc---------e--------------------------------------------------------
Q psy10608 365 VDEGATLLLDGRNL---------K-------------------------------------------------------- 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~~---------~-------------------------------------------------------- 379 (445)
+++||++++||... .
T Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~ 397 (456)
T cd07107 318 KREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDI 397 (456)
T ss_pred HHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCH
Confidence 99999999998521 0
Q ss_pred --------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 --------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 --------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+++++
T Consensus 398 ~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfgG~k~SG~G--~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 398 SQAHRTARRVEAGYVWINGSSRH-FLGAPFGGVKNSGIG--REECLEELLSYTQEKNVNVR 455 (456)
T ss_pred HHHHHHHHhcCcCEEEECCCCCC-CCCCCcCCcccccCC--cCchHHHHHHhhceEEEEEe
Confidence 999987654 467899999999999 56999999999999999864
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-78 Score=626.43 Aligned_cols=372 Identities=32% Similarity=0.497 Sum_probs=345.5
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 128 (445)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCcccccC---ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCCh
Q psy10608 129 LRGLQVVEQCCSIPTIMQG---ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p 205 (445)
..+++.++|++...+.+.+ ...+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999887665532 2222112345578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 206 GACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 206 ~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
.++..++++|.++|+|+|+||+|+|+ .+.++.|+.||+++.|+||||+.+|+.|.++++++++|+++|+|||||+||++
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~ 240 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence 99999999999999999999999994 56789999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~ 362 (445)
|||+|.|++.+++++|.|+||.|++++|+ |||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.++++
T Consensus 241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~ 319 (456)
T cd07110 241 DADLEKAVEWAMFGCFWNNGQICSATSRL-LVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIA 319 (456)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCceE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 7787 69999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCccc----e-----------------------------------------------------------
Q psy10608 363 SGVDEGATLLLDGRNL----K----------------------------------------------------------- 379 (445)
Q Consensus 363 ~a~~~Ga~~~~GG~~~----~----------------------------------------------------------- 379 (445)
+++.+||++++||... .
T Consensus 320 ~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 399 (456)
T cd07110 320 RGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDA 399 (456)
T ss_pred HHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999998531 0
Q ss_pred --------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 --------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 --------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 400 ~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 400 ERCDRVAEALEAGIVWINCSQPC-FPQAPWGGYKRSGIG--RELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHHhCCcceEEECCCCCC-CCCCCCCCcccccCC--ccchHHHHHHhcceeEEe
Confidence 999986543 467899999999999 579999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-78 Score=626.73 Aligned_cols=390 Identities=30% Similarity=0.423 Sum_probs=359.1
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCC-CHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT-SIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
+++||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++||+.|+.+ +.++|.++|+++++.|++++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999875 6789999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccC----CCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA----KDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
|++++++|+|||..++..|+..+++.++++++..+.+.+...+... .+...+.+++|+|||++|+|||||+.+.++
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 9999999999999999999999999999998776655544332111 244568899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
++++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++| +.+.++.|+.|++++.|+||||+++|+.|.+.+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 240 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH 240 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 456789999999999999999999999999987
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++
T Consensus 241 ~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v-~v~~~i~d~f~~~l~~~~~~~~~g~~~~~ 317 (473)
T cd07082 241 P--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRV-LVHESVADELVELLKEEVAKLKVGMPWDN 317 (473)
T ss_pred C--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEE-EEcHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 6 79999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++++||++++++++++.+++++++.+|+++++||....
T Consensus 318 ~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~ 397 (473)
T cd07082 318 GVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIEL 397 (473)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999886320
Q ss_pred -------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 -------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 -------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||+++....+.+||||+|+||+| +++|++|+++||+.|++++
T Consensus 398 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g--~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 398 ANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG--TQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC--CCChHHHHHHhhceeEEEE
Confidence 9999865433356899999999999 6699999999999999975
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-78 Score=625.33 Aligned_cols=373 Identities=32% Similarity=0.479 Sum_probs=349.4
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 128 (445)
++||+||+++++++.++.+|++.+++.|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHH
Q psy10608 129 LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~ 208 (445)
..+++.++||+++.+.+.++..+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVP-LPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeec-cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 99999999999887766554433 22355678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCH
Q psy10608 209 MMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANR 288 (445)
Q Consensus 209 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl 288 (445)
..+.++|.++|+|+|++|+|+|+.+.++.|+.|+++++|+||||+++|+.|++.++++++|+++|+|||||+||++|||+
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl 239 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCH
Confidence 99999999999999999999997778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy10608 289 SNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVD 366 (445)
Q Consensus 289 ~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 366 (445)
|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||++++++++++.++|+++++
T Consensus 240 ~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 318 (457)
T cd07090 240 ENAVNGAMMANFLSQGQVCSNGTRV-FVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQ 318 (457)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 7787 699999999999999999999999999999999999999999999999
Q ss_pred cCCEEEeCCccc--------e-----------------------------------------------------------
Q psy10608 367 EGATLLLDGRNL--------K----------------------------------------------------------- 379 (445)
Q Consensus 367 ~Ga~~~~GG~~~--------~----------------------------------------------------------- 379 (445)
+||++++||... .
T Consensus 319 ~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~ 398 (457)
T cd07090 319 EGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ 398 (457)
T ss_pred CCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHH
Confidence 999999988520 0
Q ss_pred -------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++||+.|++++.
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 399 RAHRVIAQLQAGTCWINTYNIS-PVEVPFGGYKQSGFG--RENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred HHHHHHHhCCcCeEEECCCCCC-CCCCCcCCCccCcCC--ccchHHHHHHHhCeEEEEEe
Confidence 999986543 467899999999999 56999999999999999864
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-78 Score=624.50 Aligned_cols=371 Identities=33% Similarity=0.513 Sum_probs=345.7
Q ss_pred ecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHH
Q psy10608 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD 127 (445)
Q Consensus 50 ~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 127 (445)
+||+||+++++++.++.+|++++++.|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 589999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHH
Q psy10608 128 VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207 (445)
Q Consensus 128 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~ 207 (445)
+..+++.++|++.+.+++.+...+....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999987666655443322233456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 208 CMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 208 ~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+..++++|.++|+|+|+||+|+|+ .+.++.|+.|+++++|.||||+++|+.|.+.++++++++++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 999999999999999999999995 4578999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
|++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv-~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (454)
T cd07118 242 DLDAAADAVVFGVYFNAGECCNSGSRL-LVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAG 320 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCCCCceE-EEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 7787 6999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCccc------e-----------------------------------------------------------
Q psy10608 365 VDEGATLLLDGRNL------K----------------------------------------------------------- 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~~------~----------------------------------------------------------- 379 (445)
+++||++++||... .
T Consensus 321 ~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~ 400 (454)
T cd07118 321 RAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTA 400 (454)
T ss_pred HhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHH
Confidence 99999999998531 0
Q ss_pred -----------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 401 ~~~~~~l~~g~v~iN~~~~~-~~~~PfgG~~~SG~G--~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 401 LTVARRIRAGTVWVNTFLDG-SPELPFGGFKQSGIG--RELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHhcCcCEEEECCCCCC-CCCCCcCCcccccCC--cCchHHHHHHHhceeEEe
Confidence 999987653 467899999999999 679999999999999986
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-78 Score=630.06 Aligned_cols=381 Identities=36% Similarity=0.566 Sum_probs=353.5
Q ss_pred eeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q psy10608 38 FVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQ 117 (445)
Q Consensus 38 ~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 117 (445)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 777765 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEE
Q psy10608 118 GKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197 (445)
Q Consensus 118 Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VV 197 (445)
|||..+++.|+..+++.++|++...+.+.++.++. ..+...++.++|+|||++|+|||||+.++++++++||++||+||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99999999999999999999999888777766553 46778899999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCC
Q psy10608 198 IKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGA 276 (445)
Q Consensus 198 lKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGG 276 (445)
+|||+.+|.++..+++++.++|+|+|++|+++| +.+.+..|+.||++++|+||||+++|+.|.+.++++++|+++|+||
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG 238 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGG 238 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccc
Confidence 999999999999999999999999999999999 6788999999999999999999999999999999999999999999
Q ss_pred CCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHH
Q psy10608 277 KNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAK 354 (445)
Q Consensus 277 k~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~ 354 (445)
|||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||+++.++.
T Consensus 239 ~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v-~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~ 317 (462)
T PF00171_consen 239 KNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRV-LVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQR 317 (462)
T ss_dssp EEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEE-EEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHH
T ss_pred cceeeEecccccccccccccchhcccccccccccccc-cccccccchhhhhhhhccccccccCCccccccccccccchhh
Confidence 9999999999999999999999999999999999999 7777 699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCc---c-ce---------------------------------------------------
Q psy10608 355 ERILSLIQSGVDEGATLLLDGR---N-LK--------------------------------------------------- 379 (445)
Q Consensus 355 ~~v~~~i~~a~~~Ga~~~~GG~---~-~~--------------------------------------------------- 379 (445)
+++.++|++++++||++++||. . ..
T Consensus 318 ~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 397 (462)
T PF00171_consen 318 ERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGL 397 (462)
T ss_dssp HHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEES
T ss_pred hhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCc
Confidence 9999999999999999999991 0 00
Q ss_pred -----------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 -----------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 -----------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++.......+||||+|+||+| +++|++|+++||+.|+|
T Consensus 398 ~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 398 TASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG--REGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES--EBSHHHHHHGTEEEEEE
T ss_pred eeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC--cchHHHHHHHhCCccCC
Confidence 9999876543334799999999999 67999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=622.19 Aligned_cols=371 Identities=31% Similarity=0.452 Sum_probs=345.4
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWS-KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD 127 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 127 (445)
++||+||+++++++.++.+|++.++++|++||+.|. .+|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999876 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHH
Q psy10608 128 VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207 (445)
Q Consensus 128 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~ 207 (445)
+..+++.++|+++..+...+...+ ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIP-LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccc-cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 999999999998877666555444 2245567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 208 CMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 208 ~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+..++++|.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+++|+.|.+.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da 239 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence 99999999999999999999999 67888999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
|++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+ ++++||++++++++++.++|+++
T Consensus 240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a 317 (454)
T cd07109 240 DLEAALPVVVNAIIQNAGQTCSAGSRL-LVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARA 317 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCccCcEE-EEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 7777 6999999999999999999976 68999999999999999999999
Q ss_pred HHcCCEEEeCCccc------------e-----------------------------------------------------
Q psy10608 365 VDEGATLLLDGRNL------------K----------------------------------------------------- 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~~------------~----------------------------------------------------- 379 (445)
+++|+++++||... .
T Consensus 318 ~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~ 397 (454)
T cd07109 318 RARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGD 397 (454)
T ss_pred HhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHH
Confidence 99999999987520 0
Q ss_pred -------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+......+.+||||+|+||+| +++|++|+++|++.|+|+
T Consensus 398 ~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 398 RALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG--REKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC--ccchHHHHHHHhceeEEe
Confidence 9999875233467899999999999 579999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-77 Score=626.91 Aligned_cols=394 Identities=26% Similarity=0.319 Sum_probs=358.8
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
.....||+|+|+ .++.+++++||+| |+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 31 ~~~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 108 (518)
T cd07125 31 WEAIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANR 108 (518)
T ss_pred cccCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 344679999998 3467899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcc-ccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET-LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||+.+++.|+..+++.+++++...+...+.. .+ ...+...+..++|+|||++|+|||||+.+.+++
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 187 (518)
T cd07125 109 GELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELP-GPTGELNGLELHGRGVFVCISPWNFPLAIFTGQ 187 (518)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceeEEEEecccEEEEECCcchHHHHHHHH
Confidence 9999999999999999999999999999999998766544332 22 223456788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|+. +.+..|+.|+++++|+||||+++|+.|++.++
T Consensus 188 i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa 267 (518)
T cd07125 188 IAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALA 267 (518)
T ss_pred HHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999965 47899999999999999999999999999988
Q ss_pred cC---CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 265 KN---GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 265 ~~---~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
++ ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.
T Consensus 268 ~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~ 346 (518)
T cd07125 268 ERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLL-YLQEEIAERFIEMLKGAMASLKVGDPW 346 (518)
T ss_pred hccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEcchhHHHHHHHHHHHHhcCCccCCC
Confidence 54 89999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------------e-------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------------K------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------------~------------------------- 379 (445)
++++++||++++++++++.++|++++. ++++++||... .
T Consensus 347 ~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~~de 425 (518)
T cd07125 347 DLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDE 425 (518)
T ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeecCChHhhCcccCCeEEEEEeCCCCHHH
Confidence 999999999999999999999999988 46899887420 0
Q ss_pred -----------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 -----------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... ..+.+||||+|+||+|+ +++|++|+++||+.|++
T Consensus 426 Ai~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~-~~gg~~~~~~ft~~k~i 504 (518)
T cd07125 426 AIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP-KAGGPNYLLRFGNEKTV 504 (518)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc-ccccHHHHHHhcceEEE
Confidence 999986542 23568999999999995 35889999999999999
Q ss_pred Eeec
Q psy10608 424 TQLW 427 (445)
Q Consensus 424 ~~~~ 427 (445)
++.+
T Consensus 505 ~~~~ 508 (518)
T cd07125 505 SLNT 508 (518)
T ss_pred EEEc
Confidence 8764
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-77 Score=619.01 Aligned_cols=368 Identities=34% Similarity=0.514 Sum_probs=343.3
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 128 (445)
++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHH
Q psy10608 129 LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~ 208 (445)
..+++.+++++.... .+...+ ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIE-DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCcccc-CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999987652 222222 12345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCH
Q psy10608 209 MMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANR 288 (445)
Q Consensus 209 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl 288 (445)
..++++|.++ +|+|++|+++|+.+.+..|+.|++++.|+||||+.+|+.|+++++++++++++|+|||||+||++|||+
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl 236 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDI 236 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCH
Confidence 9999999996 999999999997778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy10608 289 SNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVD 366 (445)
Q Consensus 289 ~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 366 (445)
|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.
T Consensus 237 ~~aa~~iv~~~~~~~GQ~C~a~~rv-~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ 315 (446)
T cd07106 237 DAVAPKLFWGAFINSGQVCAAIKRL-YVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKA 315 (446)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCcEE-EEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 7777 699999999999999999999999999999999999999999999999
Q ss_pred cCCEEEeCCccc-----e--------------------------------------------------------------
Q psy10608 367 EGATLLLDGRNL-----K-------------------------------------------------------------- 379 (445)
Q Consensus 367 ~Ga~~~~GG~~~-----~-------------------------------------------------------------- 379 (445)
+||++++||... .
T Consensus 316 ~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~ 395 (446)
T cd07106 316 KGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAV 395 (446)
T ss_pred CCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 999999998531 0
Q ss_pred --------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 --------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 --------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+|+
T Consensus 396 ~~~~~~G~v~iN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 396 ARRLEAGTVWINTHGAL-DPDAPFGGHKQSGIG--VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHhCCccEEEECCCCCC-CCCCCCCCccccccC--ccchHHHHHHhhceeEEe
Confidence 999987644 478899999999999 569999999999999986
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-77 Score=628.63 Aligned_cols=393 Identities=25% Similarity=0.371 Sum_probs=357.0
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...+++|.|.|-. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 17 ~~~~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 94 (524)
T PRK09407 17 ERLRRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENRE 94 (524)
T ss_pred HHHHHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4456788887654 46789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcc-cccc-CCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET-LAGV-AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+|++++++|+|||..++..|+..++..++||+..++...+.. .... ......+..++|+|||++|+|||||+.+.+++
T Consensus 95 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~ 174 (524)
T PRK09407 95 ELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSD 174 (524)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHH
Confidence 999999999999999999999999999999987765543322 1111 11245788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.| ++.|+||||+++|+.|++.++
T Consensus 175 ~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa 252 (524)
T PRK09407 175 AIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG 252 (524)
T ss_pred HHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 45678888886 789999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++
T Consensus 253 ~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv-~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 331 (524)
T PRK09407 253 RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERI-YVHESIYDEFVRAFVAAVRAMRLGAGYDYS 331 (524)
T ss_pred hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999 7787 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-------c---e---------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN-------L---K--------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-------~---~--------------------------------- 379 (445)
+++|||+++++++++.+++++++++||++++||.. + .
T Consensus 332 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai 411 (524)
T PRK09407 332 ADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAV 411 (524)
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999852 0 0
Q ss_pred ---------------------------------EEEeCCCCC--CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ---------------------------------VGINVPIPV--PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~--~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||++... ..+.+||||+|+||+| +++|++|+++|++.|+|+
T Consensus 412 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 412 ERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG--RRHGAEGLLKYTESQTIA 489 (524)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC--ccchHHHHHHhCCeEEEE
Confidence 999986432 2356899999999999 569999999999999998
Q ss_pred eec
Q psy10608 425 QLW 427 (445)
Q Consensus 425 ~~~ 427 (445)
+.+
T Consensus 490 ~~~ 492 (524)
T PRK09407 490 TQR 492 (524)
T ss_pred Ecc
Confidence 764
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-77 Score=618.47 Aligned_cols=370 Identities=19% Similarity=0.246 Sum_probs=329.9
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCc
Q psy10608 64 ATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIP 142 (445)
Q Consensus 64 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~ 142 (445)
-...|+++++++|++||+.|+.+|..+|.++|+++++.|++|+|+|++++++|+|||..++.. |+..+++.++|+++..
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999875 9999999999999876
Q ss_pred ccccCc-cc--cccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC
Q psy10608 143 TIMQGE-TL--AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG 219 (445)
Q Consensus 143 ~~~~~~-~~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG 219 (445)
+...+. .. .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 644331 11 1111233568899999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHh
Q psy10608 220 CPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAA 299 (445)
Q Consensus 220 lP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~ 299 (445)
+|+|+||+|+|+.+.+..|+. +++|+|+||||+++|+.|++.++++++|++||||||||+||++|||++.|++.+++++
T Consensus 166 lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~ 244 (484)
T PLN02174 166 LDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGK 244 (484)
T ss_pred CCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 999999999997777788886 8899999999999999999999999999999999999999999999999999999999
Q ss_pred h-cccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q psy10608 300 F-GAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376 (445)
Q Consensus 300 f-~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 376 (445)
| .|+||.|++++|+ +||+ +|+|+++|.++++++++|+|.+ ++++|||+++++++++.++|+++ ++|+++++||.
T Consensus 245 f~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~ 321 (484)
T PLN02174 245 WGCNNGQACISPDYI-LTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGE 321 (484)
T ss_pred hhCCCCCCCCcCcEE-EEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCC
Confidence 9 6999999999999 7787 6999999999999999999987 78999999999999999999998 78999999985
Q ss_pred cc------e--------------------------------------------------------------------EEE
Q psy10608 377 NL------K--------------------------------------------------------------------VGI 382 (445)
Q Consensus 377 ~~------~--------------------------------------------------------------------V~i 382 (445)
.. . |+|
T Consensus 322 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~I 401 (484)
T PLN02174 322 KDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVV 401 (484)
T ss_pred cCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEE
Confidence 21 0 999
Q ss_pred eCCCCCC-CCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccccccccccccCC
Q psy10608 383 NVPIPVP-LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAVS 440 (445)
Q Consensus 383 N~~~~~~-~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~ 440 (445)
|++.... .+.+||||+|+||+| +++|++|+++||+.|+|++...-.+....+|+|.
T Consensus 402 N~~~~~~~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~~ 458 (484)
T PLN02174 402 NDIAVHLALHTLPFGGVGESGMG--AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYS 458 (484)
T ss_pred CCCcCCCCCCCCCCCCcCccccC--ccchHHHHHHhcceEEEEECCccCcccccCCCCC
Confidence 9865432 257899999999999 6799999999999999987643223344566664
|
|
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-77 Score=626.66 Aligned_cols=394 Identities=21% Similarity=0.270 Sum_probs=344.9
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHh-hhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY-ETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
.++||+|+|+.+. +.+++++||+||+++++++. +.+|+++|+++|++|| +.|+++|..+|.++|++++++|++++++
T Consensus 5 ~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 82 (521)
T PRK11903 5 LANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDA 82 (521)
T ss_pred hhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999753 46799999999999999997 8899999999999995 9999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccC--------CCCceeEEEec-CCeEEEECCCCcch
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA--------KDMDIHSYRVP-LGVTAGITPFNFPA 179 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~GVv~~I~p~N~P~ 179 (445)
|++++++|+|||+.+++.|+..+++.++||+.++..+.+....... .....+..++| +|||++|+|||||+
T Consensus 83 la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 162 (521)
T PRK11903 83 YYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPA 162 (521)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHH
Confidence 9999999999999999999999999999999876655432211000 12234677899 69999999999999
Q ss_pred hhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC-CCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHH
Q psy10608 180 MIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG-CPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGK 257 (445)
Q Consensus 180 ~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~ 257 (445)
.+.++++++||++||+||+|||+.+|.++..|++++.++| +|+|+||+|+|+. +.++.| +++++|+||||+++|+
T Consensus 163 ~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~ 239 (521)
T PRK11903 163 WGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAA 239 (521)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 9999999999853 444444 7899999999999999
Q ss_pred HHHHHh--hcCCCcEEEeCCCCCeeEecCCCC-----HHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHH
Q psy10608 258 YIYERG--AKNGKRVQSNMGAKNHGVIMSDAN-----RSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKK 328 (445)
Q Consensus 258 ~i~~~a--a~~~~~~~lElGGk~~~iV~~daD-----l~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~ 328 (445)
.|++.+ +++++|++||||||||+||++||| ++.+++.+++++|.|+||.|++++|+ +||+ +|+|+++|++
T Consensus 240 ~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv-~V~~~i~d~f~~~L~~ 318 (521)
T PRK11903 240 VLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRI-FVPEALYDAVAEALAA 318 (521)
T ss_pred HHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEE-EEehhHHHHHHHHHHH
Confidence 999864 478999999999999999999999 59999999999999999999999999 7777 6999999999
Q ss_pred HHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-----------ce------------------
Q psy10608 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN-----------LK------------------ 379 (445)
Q Consensus 329 ~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-----------~~------------------ 379 (445)
+++++++|+|.++++++|||+++.+++++.++|+. ..+||++++||.. ..
T Consensus 319 ~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~ 397 (521)
T PRK11903 319 RLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVH 397 (521)
T ss_pred HHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHH
Confidence 99999999999999999999999999999999995 4579999999842 00
Q ss_pred --------------------------------------------------------EEEeCCC--------CCCCCCCcc
Q psy10608 380 --------------------------------------------------------VGINVPI--------PVPLSMFSF 395 (445)
Q Consensus 380 --------------------------------------------------------V~iN~~~--------~~~~~~~pf 395 (445)
|+||+.+ ....+.+||
T Consensus 398 ~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~Pf 477 (521)
T PRK11903 398 DVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLH 477 (521)
T ss_pred hCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCC
Confidence 9999743 122357899
Q ss_pred CCCCCCccCCCCcchHHHHHHhheeEEEEeeccccc
Q psy10608 396 TGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 431 (445)
Q Consensus 396 GG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~~ 431 (445)
||+|+||+|++ .+|++++++||+.|+|.-+..-++
T Consensus 478 GG~k~SG~Gr~-~g~~~~l~~~t~~~~~~~~~~~~~ 512 (521)
T PRK11903 478 GGPGRAGGGEE-LGGLRALAFYHRRSAVQASPAVLD 512 (521)
T ss_pred CCCCcCcCCcc-cccHHHHHHHhccceeeCCHHHHH
Confidence 99999999942 245899999999888875543334
|
|
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-77 Score=618.92 Aligned_cols=375 Identities=31% Similarity=0.443 Sum_probs=348.0
Q ss_pred CeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChH
Q psy10608 45 DWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLA 122 (445)
Q Consensus 45 ~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 122 (445)
.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4689999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred hhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCC
Q psy10608 123 DAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201 (445)
Q Consensus 123 ~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps 201 (445)
+++. |+..+++.++|++...+.+.+...+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAP-TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceec-CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9975 9999999999999877666554333 2234456789999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh-cCCCcEEEeCCCCCe
Q psy10608 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA-KNGKRVQSNMGAKNH 279 (445)
Q Consensus 202 ~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lElGGk~~ 279 (445)
+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.|+++++|+||||+++|+.|++.++ .++||+++|+|||||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~ 240 (462)
T cd07112 161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240 (462)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence 99999999999999999999999999999 5678899999999999999999999999999988 489999999999999
Q ss_pred eEecCCC-CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHH
Q psy10608 280 GVIMSDA-NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKER 356 (445)
Q Consensus 280 ~iV~~da-Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~ 356 (445)
+||++|+ |+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|+++++++||++++.++++
T Consensus 241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 319 (462)
T cd07112 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRL-LVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDK 319 (462)
T ss_pred EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeE-EEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHH
Confidence 9999999 999999999999999999999999999 7777 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCccc-----e----------------------------------------------------
Q psy10608 357 ILSLIQSGVDEGATLLLDGRNL-----K---------------------------------------------------- 379 (445)
Q Consensus 357 v~~~i~~a~~~Ga~~~~GG~~~-----~---------------------------------------------------- 379 (445)
+.++|++++++||++++||... .
T Consensus 320 v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 399 (462)
T cd07112 320 VLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAAS 399 (462)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEE
Confidence 9999999999999999988531 0
Q ss_pred --------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 --------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 --------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++|++.|+++
T Consensus 400 i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~PfgG~k~SG~G--~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 400 VWTSDLSRAHRVARRLRAGTVWVNCFDEG-DITTPFGGFKQSGNG--RDKSLHALDKYTELKTTW 461 (462)
T ss_pred EEcCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCCCcccccCC--ccchHHHHHHHhceeEEE
Confidence 999986543 467899999999999 679999999999999986
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-77 Score=618.04 Aligned_cols=373 Identities=29% Similarity=0.427 Sum_probs=345.1
Q ss_pred EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 47 ~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 80 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV 80 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCccccccC----CCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGVA----KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~ 202 (445)
|+..+++.++|++.......++..+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~ 160 (453)
T cd07094 81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999998876655554333111 244567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeE
Q psy10608 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281 (445)
Q Consensus 203 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~i 281 (445)
.+|.++..++++|.++|+|+|+||+++|+ .+.++.|+.||+++.|+||||+++|+.|.+.+ +++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~i 238 (453)
T cd07094 161 KTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceE
Confidence 99999999999999999999999999995 45689999999999999999999999999988 5799999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHH
Q psy10608 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILS 359 (445)
Q Consensus 282 V~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~ 359 (445)
|++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++.+||++++.+++++.+
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i-~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 317 (453)
T cd07094 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRI-YVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVER 317 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEE-EEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999 7787 69999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCccce------------------------------------------------------------
Q psy10608 360 LIQSGVDEGATLLLDGRNLK------------------------------------------------------------ 379 (445)
Q Consensus 360 ~i~~a~~~Ga~~~~GG~~~~------------------------------------------------------------ 379 (445)
+|++|+++|+++++||....
T Consensus 318 ~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~ 397 (453)
T cd07094 318 WVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNV 397 (453)
T ss_pred HHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHH
Confidence 99999999999999985210
Q ss_pred ------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++.....+.+||||+|+||+| +++|++|+++|++.|+|+
T Consensus 398 a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 398 AFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG--REGVPYAMEEMTEEKTVV 452 (453)
T ss_pred HHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC--cCChHHHHHHHhceeEEe
Confidence 9999875543467999999999999 679999999999999986
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-77 Score=617.42 Aligned_cols=374 Identities=30% Similarity=0.438 Sum_probs=344.1
Q ss_pred EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 47 ~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCcccccc----CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGV----AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~ 202 (445)
|+..++..+++++.......++..+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999876654444332211 1234567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEe
Q psy10608 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVI 282 (445)
Q Consensus 203 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV 282 (445)
.+|.++..|+++|.++|+|+|+||+++|+.+.+..|+.||++++|+||||+.+|+.|.+.++. +++++|+|||||+||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV 238 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIV 238 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEE
Confidence 999999999999999999999999999987888999999999999999999999999998764 799999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHH
Q psy10608 283 MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSL 360 (445)
Q Consensus 283 ~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~ 360 (445)
++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++.+|||+++.+++++.++
T Consensus 239 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 317 (452)
T cd07147 239 DSDADLDFAAQRIIFGAFYQAGQSCISVQRV-LVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW 317 (452)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCcCCcEE-EEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999 7787 599999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCccce-------------------------------------------------------------
Q psy10608 361 IQSGVDEGATLLLDGRNLK------------------------------------------------------------- 379 (445)
Q Consensus 361 i~~a~~~Ga~~~~GG~~~~------------------------------------------------------------- 379 (445)
|++++++|+++++||....
T Consensus 318 i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a 397 (452)
T cd07147 318 VNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKA 397 (452)
T ss_pred HHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 9999999999999985210
Q ss_pred -----------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 -----------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 -----------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++.....+.+||||+|+||+| +++|++|+++||+.|+|++
T Consensus 398 ~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 398 LRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG--REGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC--CCChHHHHHHhcceeEEeC
Confidence 9999865443467899999999999 6799999999999999874
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-77 Score=616.41 Aligned_cols=370 Identities=27% Similarity=0.418 Sum_probs=339.7
Q ss_pred ecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHH
Q psy10608 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVL 129 (445)
Q Consensus 50 ~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 129 (445)
.||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCcccccCcc-cccc-CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHH
Q psy10608 130 RGLQVVEQCCSIPTIMQGET-LAGV-AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207 (445)
Q Consensus 130 ~~~~~l~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~ 207 (445)
.+++.++|++.......+.. .+.. ......+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999987765443322 1111 112356889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 208 CMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 208 ~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+..+.+++.++|+|+|++|+|+| +.+.+..|+.| ++.|+||||+++|+.|++.++++++|+++|||||||+||++||
T Consensus 161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dA 238 (454)
T cd07101 161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA 238 (454)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCC
Confidence 99999999999999999999999 46678889987 5899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
|+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++|||++++++++++++|+++
T Consensus 239 dl~~a~~~i~~~~~~~sGQ~C~a~~rv-~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a 317 (454)
T cd07101 239 DLDKAAAGAVRACFSNAGQLCVSIERI-YVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDA 317 (454)
T ss_pred CHHHHHHHHHHHHHhcCCCCcccCeEE-EEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 7787 6999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCcc------c----e-------------------------------------------------------
Q psy10608 365 VDEGATLLLDGRN------L----K------------------------------------------------------- 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~------~----~------------------------------------------------------- 379 (445)
+++||++++||.. . .
T Consensus 318 ~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a 397 (454)
T cd07101 318 VAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARG 397 (454)
T ss_pred HHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 9999999999852 0 0
Q ss_pred -----------EEEeCCCCC--CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------VGINVPIPV--PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------V~iN~~~~~--~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||++... ..+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 398 ~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 398 RRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG--RRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC--ccchHHHHHHhcceEEEe
Confidence 999986432 3457899999999999 569999999999999986
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=615.74 Aligned_cols=372 Identities=33% Similarity=0.508 Sum_probs=347.1
Q ss_pred ecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HH
Q psy10608 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DV 128 (445)
Q Consensus 50 ~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev 128 (445)
+||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999975 99
Q ss_pred HHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHH
Q psy10608 129 LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~ 208 (445)
..+++.++|++.+.+...+...+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIP-VRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceec-CCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 99999999999876666554443 22445678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCC
Q psy10608 209 MMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDAN 287 (445)
Q Consensus 209 ~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daD 287 (445)
..++++|.++|+|+|++|+|+|+ .+.++.|+.||++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd 240 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence 99999999999999999999994 56789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy10608 288 RSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGV 365 (445)
Q Consensus 288 l~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 365 (445)
++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (453)
T cd07115 241 LDAAVRAAATGIFYNQGQMCTAGSRL-LVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGR 319 (453)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEE-EEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 7787 69999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeCCccc---e---------------------------------------------------------------
Q psy10608 366 DEGATLLLDGRNL---K--------------------------------------------------------------- 379 (445)
Q Consensus 366 ~~Ga~~~~GG~~~---~--------------------------------------------------------------- 379 (445)
++|+++++||... .
T Consensus 320 ~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~ 399 (453)
T cd07115 320 EEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHR 399 (453)
T ss_pred HCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHH
Confidence 9999999988631 0
Q ss_pred ---------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|++.|++++.
T Consensus 400 ~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 400 VAAALKAGTVWINTYNRF-DPGSPFGGYKQSGFG--REMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHhcCccEEEECCCCCC-CCCCCCCCcccccCC--cCchHHHHHHhhceEEEEEe
Confidence 999986544 467899999999999 56999999999999999764
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=615.59 Aligned_cols=372 Identities=31% Similarity=0.446 Sum_probs=344.3
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWS-KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG- 126 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~- 126 (445)
++||+||+++++++.++.+|+++++++|++||+.|+ ++|..+|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 999999999999999999999999999999999999987754
Q ss_pred HHHHHHHHHHHHccCcccccCcc-cccc---CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGET-LAGV---AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~ 202 (445)
|+..+++.++|+++......++. ++.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999998766554433 2211 1245578999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeE
Q psy10608 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281 (445)
Q Consensus 203 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~i 281 (445)
.+|.++..++++|.++|+|+|+||+|+|+ .+.+..|+.||+++.|+||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i 240 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence 99999999999999999999999999995 45789999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHH
Q psy10608 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILS 359 (445)
Q Consensus 282 V~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~ 359 (445)
|++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.+
T Consensus 241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v-~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~ 319 (459)
T cd07089 241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRL-LVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEG 319 (459)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999 7787 59999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCccc----e--------------------------------------------------------
Q psy10608 360 LIQSGVDEGATLLLDGRNL----K-------------------------------------------------------- 379 (445)
Q Consensus 360 ~i~~a~~~Ga~~~~GG~~~----~-------------------------------------------------------- 379 (445)
+|++++++|+++++||... .
T Consensus 320 ~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t 399 (459)
T cd07089 320 YIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWS 399 (459)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEc
Confidence 9999999999999998530 0
Q ss_pred -----------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++... .+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 400 ~d~~~~~~~~~~~~~G~v~iN~~~~~-~~~~PfgG~k~SG~G--~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 400 ADVDRAYRVARRIRTGSVGINGGGGY-GPDAPFGGYKQSGLG--RENGIEGLEEFLETKSIA 458 (459)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCcCCcccccCC--CCchHHHHHHhhceeEEe
Confidence 999987643 467899999999999 569999999999999986
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=615.92 Aligned_cols=371 Identities=25% Similarity=0.372 Sum_probs=345.3
Q ss_pred ecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHH
Q psy10608 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVL 129 (445)
Q Consensus 50 ~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 129 (445)
+||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHH
Q psy10608 130 RGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209 (445)
Q Consensus 130 ~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~ 209 (445)
.+++.++|++...+...+........+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999987766544332221233455678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHH
Q psy10608 210 MLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRS 289 (445)
Q Consensus 210 ~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~ 289 (445)
.|.++|.++|+|+|++|+|+|+.+.+..|+.||+++.|+||||+++|+.|+++++++++|+++|+|||||+||++|||+|
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~ 240 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD 240 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHH
Confidence 99999999999999999999966888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc
Q psy10608 290 NTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDE 367 (445)
Q Consensus 290 ~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 367 (445)
.|++.+++++|+|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++
T Consensus 241 ~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 319 (452)
T cd07102 241 AAAESLVDGAFFNSGQSCCSIERI-YVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAK 319 (452)
T ss_pred HHHHHHHHHHHHhCCCCCcCCcEE-EEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999 7777 6999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCccc-----e---------------------------------------------------------------
Q psy10608 368 GATLLLDGRNL-----K--------------------------------------------------------------- 379 (445)
Q Consensus 368 Ga~~~~GG~~~-----~--------------------------------------------------------------- 379 (445)
|+++++||... .
T Consensus 320 ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 320 GARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 99999998531 0
Q ss_pred ----------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ----------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ----------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++... .+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 400 ~~~~~l~~G~v~iN~~~~~-~~~~pfgG~k~SG~G--~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 400 ALGEQLETGTVFMNRCDYL-DPALAWTGVKDSGRG--VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHcCcceEEECCCCCC-CCCCCCCCccccccC--ccchHHHHHHHhceeEEe
Confidence 999987643 467899999999999 679999999999999986
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-77 Score=619.35 Aligned_cols=378 Identities=25% Similarity=0.355 Sum_probs=346.7
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCC-ceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATN-EVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g-~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..++||||+|+. ++.+++++||+|+ +++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 37 ~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 114 (500)
T TIGR01238 37 QAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMP 114 (500)
T ss_pred ecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHH
Confidence 458999999986 4678999999996 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++|++...+...+ ...++|+|||++|+|||||+.+.+++++
T Consensus 115 ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~ 182 (500)
T TIGR01238 115 ELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLG------------EFSVESRGVFVCISPWNFPLAIFTGQIS 182 (500)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------ceeccCcceEEEECCCchHHHHHHHHHH
Confidence 9999999999999999999999999999999876543221 1368999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
+||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+ .+.+..|+.||++++|+||||+.+|+.|++.++++
T Consensus 183 ~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~ 262 (500)
T TIGR01238 183 AALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQR 262 (500)
T ss_pred HHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999985 57889999999999999999999999999999987
Q ss_pred C---CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 267 G---KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 267 ~---~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++
T Consensus 263 ~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv-~V~~~i~d~f~~~L~~~~~~~~vG~p~~~ 341 (500)
T TIGR01238 263 EDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVL-CVQEDVADRVLTMIQGAMQELKVGVPHLL 341 (500)
T ss_pred ccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcee-EEcHhhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 6 7999999999999999999999999999999999999999999999 7887 59999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeC---Cc-----c--c--------e------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLD---GR-----N--L--------K------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~G---G~-----~--~--------~------------------------ 379 (445)
+++|||++++.++++++++|++++++|++++.| +. . + .
T Consensus 342 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~d 421 (500)
T TIGR01238 342 TTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFELDDIAELSEEVFGPVLHVVRYKARELD 421 (500)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHH
Confidence 999999999999999999999999999988732 21 0 0 0
Q ss_pred ------------------------------------EEEeCCCCCC-CCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 ------------------------------------VGINVPIPVP-LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~-~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
|+||+..... .+.+||||+|+||+|. +++|++++++|++.|+
T Consensus 422 eai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 422 QIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGP-KAGGPHYLYRLTQVQY 500 (500)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-ccCCHHHHHHHHhhcC
Confidence 9999865332 2457999999999994 3599999999999874
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=638.86 Aligned_cols=390 Identities=19% Similarity=0.268 Sum_probs=344.8
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKA-YETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
|.++++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+++|..+|+++|++++++|+++
T Consensus 2 ~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~ 79 (675)
T PRK11563 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLER 79 (675)
T ss_pred CccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 445689999999986 45779999999999999999987 6999999999998 79999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCccccc--------CccccccCCC-CceeEEEecC-CeEEEECCC
Q psy10608 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ--------GETLAGVAKD-MDIHSYRVPL-GVTAGITPF 175 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~I~p~ 175 (445)
+++|++ +++|+|||+.+++.|+..+++.++||+..++... ++..+....+ ...+..++|+ |||++|+||
T Consensus 80 ~~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~Pw 158 (675)
T PRK11563 80 KEELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAF 158 (675)
T ss_pred HHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCC
Confidence 999998 5999999999999999999999999998764432 3322211112 2246888997 999999999
Q ss_pred CcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC-CCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHH
Q psy10608 176 NFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG-CPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQ 254 (445)
Q Consensus 176 N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~ 254 (445)
|||+.++++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|+.. +.+..++.+++|+||||++
T Consensus 159 NfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTGS~~ 236 (675)
T PRK11563 159 NFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTGSAA 236 (675)
T ss_pred chHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEECcHH
Confidence 99999999999999999999999999999999999999999999 99999999998532 2333446799999999999
Q ss_pred HHHHHHHH--hhcCCCcEEEeCCCCCeeEecCCCC-----HHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHH
Q psy10608 255 AGKYIYER--GAKNGKRVQSNMGAKNHGVIMSDAN-----RSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPE 325 (445)
Q Consensus 255 ~g~~i~~~--aa~~~~~~~lElGGk~~~iV~~daD-----l~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~ 325 (445)
+|+.|++. ++++++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++
T Consensus 237 ~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv-~V~~~i~d~f~~~ 315 (675)
T PRK11563 237 TAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRA-IVPRALVDAVIEA 315 (675)
T ss_pred HHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeE-EeeHHHHHHHHHH
Confidence 99999985 4588999999999999999999995 99999999999999999999999999 7777 6999999
Q ss_pred HHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--------c--e----------------
Q psy10608 326 LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN--------L--K---------------- 379 (445)
Q Consensus 326 l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--------~--~---------------- 379 (445)
|+++++++++|+|.++++++|||+++++++++.++|++|+++ |++++||.. . .
T Consensus 316 l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~ 394 (675)
T PRK11563 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEA 394 (675)
T ss_pred HHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhh
Confidence 999999999999999999999999999999999999999999 999999841 0 0
Q ss_pred ------------------------------------------------------------EEEeCCC--------CCCCC
Q psy10608 380 ------------------------------------------------------------VGINVPI--------PVPLS 391 (445)
Q Consensus 380 ------------------------------------------------------------V~iN~~~--------~~~~~ 391 (445)
||||+.. ....+
T Consensus 395 ~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~ 474 (675)
T PRK11563 395 PAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLP 474 (675)
T ss_pred hhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCc
Confidence 8999642 11235
Q ss_pred CCccCCCCCCccCCCCc-chHHHHHHhheeEEEEe
Q psy10608 392 MFSFTGSRGSFLGENHF-YGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 392 ~~pfGG~k~SG~G~~~~-~g~~~l~~~~~~k~v~~ 425 (445)
.+||||+|.||+|+ + +|++|+++|++.|+|..
T Consensus 475 ~~pfGG~k~SG~G~--~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 475 QLVHGGPGRAGGGE--ELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCCcCCCCCCCCCc--cccchhHHHHhheeeeeec
Confidence 78999999999994 5 57999999999999875
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-76 Score=612.00 Aligned_cols=367 Identities=29% Similarity=0.420 Sum_probs=340.7
Q ss_pred CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHH
Q psy10608 55 NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQV 134 (445)
Q Consensus 55 g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~ 134 (445)
|+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHH-HHHHH
Q psy10608 135 VEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC-MMLVD 213 (445)
Q Consensus 135 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~-~~l~~ 213 (445)
+++++.......+...+ ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+++
T Consensus 81 l~~~~~~~~~~~~~~~~-~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILP-SAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCcccc-ccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 99999776544444333 22455678899999999999999999999999999999999999999999999996 79999
Q ss_pred HHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHH
Q psy10608 214 MLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLN 293 (445)
Q Consensus 214 ~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~ 293 (445)
+|.++|+|+|++|+|+|+.+.+..|+.||++++|+||||+.+|+.|.++++++++++++|+|||||+||++|||+|.|++
T Consensus 160 ~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~ 239 (443)
T cd07152 160 LFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAAS 239 (443)
T ss_pred HHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHH
Confidence 99999999999999999878889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEE
Q psy10608 294 QLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATL 371 (445)
Q Consensus 294 ~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~ 371 (445)
.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++.+||++++.+++++.++|++++++|+++
T Consensus 240 ~i~~~~~~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 318 (443)
T cd07152 240 NGAWGAFLHQGQICMAAGRH-LVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARL 318 (443)
T ss_pred HHHHHHHhhcCCCCcCCeeE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999 7777 69999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccc------e------------------------------------------------------------------
Q psy10608 372 LLDGRNL------K------------------------------------------------------------------ 379 (445)
Q Consensus 372 ~~GG~~~------~------------------------------------------------------------------ 379 (445)
++||... .
T Consensus 319 l~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~ 398 (443)
T cd07152 319 EAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGM 398 (443)
T ss_pred EeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCe
Confidence 9998521 0
Q ss_pred EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||+++....+.+||||+|+||+|. +++|++||++|++.|+++
T Consensus 399 v~iN~~~~~~~~~~pfGG~~~SG~G~-~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 399 LHINDQTVNDEPHNPFGGMGASGNGS-RFGGPANWEEFTQWQWVT 442 (443)
T ss_pred EEECCCCCCCCCCCCCCCcccccCCC-ccCcHHHHHHhhceeEEe
Confidence 99998765444679999999999994 358999999999999986
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-76 Score=610.77 Aligned_cols=371 Identities=28% Similarity=0.424 Sum_probs=344.2
Q ss_pred ecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHH
Q psy10608 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVL 129 (445)
Q Consensus 50 ~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 129 (445)
+||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCcccccCc-ccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChH
Q psy10608 130 RGLQVVEQCCSIPTIMQGE-TLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206 (445)
Q Consensus 130 ~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~ 206 (445)
.+++.++|++.......+. ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 9999999999876554332 22211 23456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 207 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
++..|+++|.++|+|+|+||+|+|+.+.+..|+.| .+|+|+||||+++|+.|.+.++++++|+++|+|||||+||++||
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~da 239 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA 239 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCC
Confidence 99999999999999999999999976788889988 49999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
|++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~ri-~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a 318 (453)
T cd07099 240 DLERAAAAAVWGAMVNAGQTCISVERV-YVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDA 318 (453)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 7887 6999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCccc--e---------------------------------------------------------------
Q psy10608 365 VDEGATLLLDGRNL--K--------------------------------------------------------------- 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~~--~--------------------------------------------------------------- 379 (445)
+++||++++||... .
T Consensus 319 ~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 398 (453)
T cd07099 319 VAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAE 398 (453)
T ss_pred HhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHH
Confidence 99999999998642 0
Q ss_pred ----------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ----------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ----------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||+.... ..+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g--~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 399 AIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG--RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC--ccChHHHHHHhcceEEEe
Confidence 999986433 3468999999999999 679999999999999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-76 Score=611.13 Aligned_cols=373 Identities=32% Similarity=0.479 Sum_probs=345.8
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
++||+||+++++++.++.+|+++++++|++|++ .|+.+|.++|.++|++++++|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 469999999999999999999999999999997 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChH
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~ 206 (445)
|+..+++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999987766554443332213455788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCC
Q psy10608 207 ACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285 (445)
Q Consensus 207 ~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 285 (445)
++..|+++|.++|+|+|+||+|+|+ .+.++.|+.|+++++|+||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 240 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence 9999999999999999999999994 567899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy10608 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQS 363 (445)
Q Consensus 286 aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 363 (445)
||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++|||+++++++++.++|++
T Consensus 241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 319 (457)
T cd07114 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRL-LVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVAR 319 (457)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCceE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 7787 599999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCccc---------e-------------------------------------------------------
Q psy10608 364 GVDEGATLLLDGRNL---------K------------------------------------------------------- 379 (445)
Q Consensus 364 a~~~Ga~~~~GG~~~---------~------------------------------------------------------- 379 (445)
++++|+++++||... .
T Consensus 320 a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d 399 (457)
T cd07114 320 AREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRD 399 (457)
T ss_pred HHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCC
Confidence 999999999988531 0
Q ss_pred ---------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ---------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ---------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||+.... .+.+||||+|+||+| +++|++|+++||+.|++++
T Consensus 400 ~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 400 LARAHRVARAIEAGTVWVNTYRAL-SPSSPFGGFKDSGIG--RENGIEAIREYTQTKSVWI 457 (457)
T ss_pred HHHHHHHHHhcCcceEEECCCCCC-CCCCCCCCCccCcCC--ccchHHHHHHHhceeEEeC
Confidence 999986544 467899999999999 5699999999999999863
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-75 Score=607.89 Aligned_cols=370 Identities=31% Similarity=0.470 Sum_probs=343.1
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh-HhhhHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL-ADAEGD 127 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~~e 127 (445)
++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 688889
Q ss_pred HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHH
Q psy10608 128 VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207 (445)
Q Consensus 128 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~ 207 (445)
+..+++.+++++++..++.+...+. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceecc-CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 9999999999998876666555442 234456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 208 CMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 208 ~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+..+++++.++ +|+|++|+|+| +.+.++.|+.||++|+|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dA 238 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCC
Confidence 99999999986 99999999998 46778999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH-hhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGA-AFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQS 363 (445)
Q Consensus 287 Dl~~a~~~iv~~-~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 363 (445)
|++.|++.++++ +|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++|||+++.+++++.++|++
T Consensus 239 dl~~Aa~~iv~~~~f~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (457)
T cd07108 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRL-FVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDL 317 (457)
T ss_pred CHHHHHHHHHHhhHhhcCCCCCCCCeEE-EEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999 599999999999999 7787 599999999999999999999999999999999999999999999
Q ss_pred HHH-cCCEEEeCCccc-------e--------------------------------------------------------
Q psy10608 364 GVD-EGATLLLDGRNL-------K-------------------------------------------------------- 379 (445)
Q Consensus 364 a~~-~Ga~~~~GG~~~-------~-------------------------------------------------------- 379 (445)
+++ +||++++||... .
T Consensus 318 a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~ 397 (457)
T cd07108 318 GLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTR 397 (457)
T ss_pred HHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcC
Confidence 998 999999998531 0
Q ss_pred ----------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHH-HHHhheeEEEE
Q psy10608 380 ----------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQG-FYFYTETKTVT 424 (445)
Q Consensus 380 ----------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~-l~~~~~~k~v~ 424 (445)
|+||++... .+.+||||+|+||+| +++|.++ +++||+.|+++
T Consensus 398 d~~~a~~~~~~l~~g~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 398 DLGRALRAAHALEAGWVQVNQGGGQ-QPGQSYGGFKQSGLG--REASLEGMLEHFTQKKTVN 456 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCcccCcCC--CCccchhHHHHhhceEEEe
Confidence 999987643 467899999999999 5689866 79999999986
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-75 Score=606.31 Aligned_cols=370 Identities=29% Similarity=0.475 Sum_probs=341.8
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GD 127 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 127 (445)
++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998764 59
Q ss_pred HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHH
Q psy10608 128 VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207 (445)
Q Consensus 128 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~ 207 (445)
+..+++.+++++...+.+.+...+....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999877665544332211223456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 208 CMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 208 ~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+..|.++|.+ |+|+|++|+|+|+ .+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dA 239 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCC
Confidence 9999999999 9999999999985 4578999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
|+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 240 dl~~aa~~iv~~~~~~~GQ~C~a~~~v-~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a 318 (450)
T cd07092 240 DLDAAVAGIATAGYYNAGQDCTAACRV-YVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERA 318 (450)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEE-EEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 7787 6999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCccc-----e------------------------------------------------------------
Q psy10608 365 VDEGATLLLDGRNL-----K------------------------------------------------------------ 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~~-----~------------------------------------------------------------ 379 (445)
. +|+++++||... .
T Consensus 319 ~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~ 397 (450)
T cd07092 319 P-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAM 397 (450)
T ss_pred H-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 9 999999998531 0
Q ss_pred ----------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ----------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ----------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|++.|+++
T Consensus 398 ~~~~~l~~g~v~iN~~~~~-~~~~PfgG~~~SG~G--~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 398 RLSARLDFGTVWVNTHIPL-AAEMPHGGFKQSGYG--KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHhcCccEEEECCCCCC-CCCCCcCCcccCcCC--CCChHHHHHHHheeeEEe
Confidence 999987654 467999999999999 569999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-75 Score=604.99 Aligned_cols=372 Identities=35% Similarity=0.560 Sum_probs=347.2
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHH
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 128 (445)
++||.||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHH
Q psy10608 129 LRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~ 208 (445)
..+++.++|++...+...+...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999998776665554443222455678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCC
Q psy10608 209 MMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDAN 287 (445)
Q Consensus 209 ~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daD 287 (445)
..+.++|.++|+|+|++|+++|+ .+.++.|+.|+++|+|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 240 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 99999999999999999999994 56778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy10608 288 RSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGV 365 (445)
Q Consensus 288 l~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 365 (445)
++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++||++++.+.+++.+++++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~ 319 (451)
T cd07103 241 LDKAVDGAIASKFRNAGQTCVCANRI-YVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAV 319 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeeE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 7787 59999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeCCccce------------------------------------------------------------------
Q psy10608 366 DEGATLLLDGRNLK------------------------------------------------------------------ 379 (445)
Q Consensus 366 ~~Ga~~~~GG~~~~------------------------------------------------------------------ 379 (445)
.+|+++++||....
T Consensus 320 ~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 399 (451)
T cd07103 320 AKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWR 399 (451)
T ss_pred HCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 99999999885310
Q ss_pred ---------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ---------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ---------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++... .+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 400 ~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 400 VAEALEAGMVGINTGLIS-DAEAPFGGVKESGLG--REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHhCCcceEEECCCCCC-CCCCCcCCCccCcCC--ccchHHHHHHHhceeEEe
Confidence 999987644 467899999999999 569999999999999986
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-75 Score=604.21 Aligned_cols=374 Identities=27% Similarity=0.405 Sum_probs=339.7
Q ss_pred ecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HH
Q psy10608 50 HNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DV 128 (445)
Q Consensus 50 ~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev 128 (445)
+||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+++++|++++++|+|||+.+++. |+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999864 99
Q ss_pred HHHHHHHHHHccCcccc-cCcccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCCh
Q psy10608 129 LRGLQVVEQCCSIPTIM-QGETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205 (445)
Q Consensus 129 ~~~~~~l~~~a~~~~~~-~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p 205 (445)
..+++.++|++...+.. .+...+.. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999998665442 22222211 1123457889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH----HHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeE
Q psy10608 206 GACMMLVDML----TQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281 (445)
Q Consensus 206 ~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~i 281 (445)
+++..+++++ .++|+|+|+||+|+|+.+.++.|+.||+|+.|.||||+++|+.|.+.++++++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 9998766554 689999999999999778889999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHH
Q psy10608 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILS 359 (445)
Q Consensus 282 V~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~ 359 (445)
|++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++|||+++.+++++.+
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~ 319 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERV-IVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEE 319 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999 7787 69999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCccc---------e---------------------------------------------------
Q psy10608 360 LIQSGVDEGATLLLDGRNL---------K--------------------------------------------------- 379 (445)
Q Consensus 360 ~i~~a~~~Ga~~~~GG~~~---------~--------------------------------------------------- 379 (445)
+|++++.+||++++||... .
T Consensus 320 ~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i 399 (465)
T cd07098 320 LVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASV 399 (465)
T ss_pred HHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence 9999999999999997420 0
Q ss_pred -------------------EEEeCCC-CCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -------------------VGINVPI-PVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -------------------V~iN~~~-~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||... ....+..||||+|+||+| +++|++|+++|++.|+++++
T Consensus 400 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 400 FGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG--RFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred EcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC--ccChHHHHHHhheeEEEEEe
Confidence 9999754 223467899999999999 57999999999999999753
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-75 Score=602.34 Aligned_cols=369 Identities=30% Similarity=0.421 Sum_probs=337.9
Q ss_pred EeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHH
Q psy10608 48 DLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD 127 (445)
Q Consensus 48 ~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 127 (445)
+++||+||+++++++.++.+|+++++++|+++ |+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 57899999999999999999999999999865 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCcccccCcccccc----CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCC
Q psy10608 128 VLRGLQVVEQCCSIPTIMQGETLAGV----AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203 (445)
Q Consensus 128 v~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~ 203 (445)
+..+++.++|++.......++..+.. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999887655544433211 12344678899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEe
Q psy10608 204 DPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVI 282 (445)
Q Consensus 204 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV 282 (445)
+|.++..+.++|.++|+|+|+||+++|+ .+.++.|+.||+++.|+||||+.+|+.|.+.++ ++++++|+|||||+||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV 236 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV 236 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence 9999999999999999999999999985 577899999999999999999999999998775 6899999999999999
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHH
Q psy10608 283 MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSL 360 (445)
Q Consensus 283 ~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~ 360 (445)
++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++|||+++.+++++.++
T Consensus 237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~ 315 (451)
T cd07146 237 MDDADLERAATLAVAGSYANSGQRCTAVKRI-LVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENR 315 (451)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCceE-EEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999 7787 699999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCccce-------------------------------------------------------------
Q psy10608 361 IQSGVDEGATLLLDGRNLK------------------------------------------------------------- 379 (445)
Q Consensus 361 i~~a~~~Ga~~~~GG~~~~------------------------------------------------------------- 379 (445)
+++++++|+++++||....
T Consensus 316 v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 395 (451)
T cd07146 316 VEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTI 395 (451)
T ss_pred HHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 9999999999999985210
Q ss_pred -----------EEEeCCCCCCCCCCccCCCCCCcc-CCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------VGINVPIPVPLSMFSFTGSRGSFL-GENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------V~iN~~~~~~~~~~pfGG~k~SG~-G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++.....+.+||||+|+||+ | +++|++|+++||+.|+++
T Consensus 396 ~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g--~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 396 KRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG--KEGVREAMKEMTNVKTYS 450 (451)
T ss_pred HHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc--ccChHHHHHHHhceeEEe
Confidence 999986544446789999999996 7 569999999999999986
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-75 Score=598.95 Aligned_cols=350 Identities=28% Similarity=0.422 Sum_probs=326.1
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccC-
Q psy10608 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG- 147 (445)
Q Consensus 69 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~- 147 (445)
+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++|++...+...+
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999987665433
Q ss_pred ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEE
Q psy10608 148 ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227 (445)
Q Consensus 148 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~v 227 (445)
+.++ . ++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+
T Consensus 81 ~~~~-~-~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~ 158 (429)
T cd07100 81 EPIE-T-DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN 158 (429)
T ss_pred eecc-C-CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence 3333 1 2445778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcc
Q psy10608 228 IHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRC 307 (445)
Q Consensus 228 v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C 307 (445)
|+|+.+.+..|+.|+++++|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|
T Consensus 159 v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C 238 (429)
T cd07100 159 LLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSC 238 (429)
T ss_pred EeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCC
Confidence 99977778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e-
Q psy10608 308 MALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K- 379 (445)
Q Consensus 308 ~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~- 379 (445)
++++|| |||+ +|+|+++|+++++++++|+|+++++++||++++.+++++.++|++++++||++++||... .
T Consensus 239 ~a~~rv-~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~ 317 (429)
T cd07100 239 IAAKRF-IVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFY 317 (429)
T ss_pred CCCeEE-EEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEE
Confidence 999999 7787 699999999999999999999999999999999999999999999999999999998531 0
Q ss_pred ---------------------------------------------------------------------EEEeCCCCCCC
Q psy10608 380 ---------------------------------------------------------------------VGINVPIPVPL 390 (445)
Q Consensus 380 ---------------------------------------------------------------------V~iN~~~~~~~ 390 (445)
|+||++... .
T Consensus 318 ~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~ 396 (429)
T cd07100 318 PPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKS-D 396 (429)
T ss_pred cCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC-C
Confidence 999987644 4
Q ss_pred CCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 391 SMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 391 ~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
+.+||||+|+||+| +++|++||++||+.|+++
T Consensus 397 ~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 397 PRLPFGGVKRSGYG--RELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCCCcCCccccccC--CcchHHHHHHhcceeEEe
Confidence 67999999999999 569999999999999986
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-74 Score=601.15 Aligned_cols=373 Identities=30% Similarity=0.446 Sum_probs=342.0
Q ss_pred EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH
Q psy10608 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126 (445)
Q Consensus 47 ~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 126 (445)
|+++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcccccCcccccc----CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGV----AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~ 202 (445)
|+..+++.++|++.......++..+.. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999998876554444332211 1123357889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeE
Q psy10608 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281 (445)
Q Consensus 203 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~i 281 (445)
.+|.++..|.++|.++|+|+|++|+++|+ .+.+..|+.||++++|+||||+++|+.|++.++ ++++++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i 238 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence 99999999999999999999999999995 455899999999999999999999999999875 789999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHH
Q psy10608 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILS 359 (445)
Q Consensus 282 V~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~ 359 (445)
|++|+|++.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.++++++|||+++.+++++.+
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 317 (453)
T cd07149 239 VDADADLEKAVERCVSGAFANAGQVCISVQRI-FVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEE 317 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCceE-EEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHH
Confidence 99999999999999999999999999999999 7787 69999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCccce------------------------------------------------------------
Q psy10608 360 LIQSGVDEGATLLLDGRNLK------------------------------------------------------------ 379 (445)
Q Consensus 360 ~i~~a~~~Ga~~~~GG~~~~------------------------------------------------------------ 379 (445)
++++++.+|+++++||....
T Consensus 318 ~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~ 397 (453)
T cd07149 318 WVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQK 397 (453)
T ss_pred HHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHH
Confidence 99999999999999885210
Q ss_pred ------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||++.....+.+||||+|+||+| +++|++|+++|++.|+++
T Consensus 398 ~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 398 ALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG--REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC--CCChHHHHHHhhceeEEe
Confidence 9999875443467899999999999 679999999999999986
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-74 Score=599.02 Aligned_cols=371 Identities=34% Similarity=0.518 Sum_probs=344.5
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-H
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-D 127 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-e 127 (445)
.+||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..+++. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999988865 9
Q ss_pred HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHH
Q psy10608 128 VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207 (445)
Q Consensus 128 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~ 207 (445)
+..+++.++++++......+...+ ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYP-QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCcccc-CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 999999999998876554443333 2235567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 208 CMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 208 ~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+..+.++|.++|+|+|+||+++| +.+.++.|+.|+++++|+||||+.+|+.|.+.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 239 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence 99999999999999999999998 56788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a 364 (445)
|++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v-~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (455)
T cd07093 240 DLDRAVDAAVRSSFSNNGEVCLAGSRI-LVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELA 318 (455)
T ss_pred CHHHHHHHHHHHHHhccCCCcCCCceE-EEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 7787 5999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCccc-------e----------------------------------------------------------
Q psy10608 365 VDEGATLLLDGRNL-------K---------------------------------------------------------- 379 (445)
Q Consensus 365 ~~~Ga~~~~GG~~~-------~---------------------------------------------------------- 379 (445)
+++|+++++||... .
T Consensus 319 ~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~ 398 (455)
T cd07093 319 RAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDL 398 (455)
T ss_pred HHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99999999998421 0
Q ss_pred --------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 --------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 --------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+.... .+..||||+|.||+| +++|++|+++|++.|+++
T Consensus 399 ~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 399 GRAHRVARRLEAGTVWVNCWLVR-DLRTPFGGVKASGIG--REGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCccCcCC--CCchHHHHHHHhceeEEe
Confidence 999987654 367899999999999 569999999999999986
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-74 Score=634.76 Aligned_cols=388 Identities=28% Similarity=0.348 Sum_probs=355.2
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCc-eEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNE-VVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~-~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
...+||| ++.+++++||+|++ ++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++
T Consensus 553 ~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~e 626 (1038)
T PRK11904 553 AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAE 626 (1038)
T ss_pred ecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3456777 35678999999987 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCc--cccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGE--TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
|+.++++|+|||+.++..|+..++++|+||+..++...+. .++ ...+..+...++|+|||++|+|||||+.++++++
T Consensus 627 L~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~-g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i 705 (1038)
T PRK11904 627 LIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLP-GPTGESNELRLHGRGVFVCISPWNFPLAIFLGQV 705 (1038)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccC-CCCCceeEEEEecceEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999999999999887766543 223 3346678899999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
++||++||+||+|||+.||+++..++++|.++|+|+|++|+|+|+ .+++..|+.||+|+.|+||||+++|+.|.+.++.
T Consensus 706 ~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~ 785 (1038)
T PRK11904 706 AAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAA 785 (1038)
T ss_pred HHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999995 4588999999999999999999999999998876
Q ss_pred C---CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 266 N---GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 266 ~---~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
+ ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|++.|+++++++++|+|.+
T Consensus 786 ~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl-~V~~si~d~fl~~L~~~~~~l~vGdp~d 864 (1038)
T PRK11904 786 RDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVL-FVQEDIADRVIEMLKGAMAELKVGDPRL 864 (1038)
T ss_pred ccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEE-EEeHHHHHHHHHHHHHHHHhccCCCccc
Confidence 5 78999999999999999999999999999999999999999999999 7777 6999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K------------------------------------ 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~------------------------------------ 379 (445)
+++++||+|++.+++++.++|+++++ |+++++||... .
T Consensus 865 ~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ld 943 (1038)
T PRK11904 865 LSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEIDSISQLEREVFGPILHVIRYKASDLD 943 (1038)
T ss_pred ccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEccCCcHHhCCCCcCcEEEEEEeCCCCHH
Confidence 99999999999999999999999876 89999988531 0
Q ss_pred ------------------------------------EEEeCCCCCC-CCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 ------------------------------------VGINVPIPVP-LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~-~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||+..... ....||||+|.||+|. +.+|+++|++|++.|+
T Consensus 944 eaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~-kaGG~~~L~~f~~~kt 1022 (1038)
T PRK11904 944 KVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGP-KAGGPHYLLRFATEKT 1022 (1038)
T ss_pred HHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCC-ccchHHHHHHHhceEE
Confidence 9999865432 2456999999999995 4689999999999999
Q ss_pred EEeec
Q psy10608 423 VTQLW 427 (445)
Q Consensus 423 v~~~~ 427 (445)
|++++
T Consensus 1023 v~~~~ 1027 (1038)
T PRK11904 1023 VTVNT 1027 (1038)
T ss_pred EEEcc
Confidence 98754
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-72 Score=584.25 Aligned_cols=370 Identities=24% Similarity=0.290 Sum_probs=327.9
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccC
Q psy10608 63 KATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSI 141 (445)
Q Consensus 63 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~ 141 (445)
.+..+|+++++++|++||+.|+.++..+|.++|+++++.|++++|+|+++++.|+|||+.++. .||..+++.++|++..
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 356889999999999999999999999999999999999999999999999999999999996 5999999999999876
Q ss_pred cccccCc---cccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHc
Q psy10608 142 PTIMQGE---TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA 218 (445)
Q Consensus 142 ~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 218 (445)
.+...+. ..+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 5544322 1111122345688999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC---CCCHHHHHHHH
Q psy10608 219 GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS---DANRSNTLNQL 295 (445)
Q Consensus 219 GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~---daDl~~a~~~i 295 (445)
+|+|+||+|+|+.++++.|+.|+ ++.|+||||+++|+.|++.++++++|+++|+|||||+||++ |||+|.|++.+
T Consensus 162 -lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i 239 (484)
T PLN02203 162 -LDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRI 239 (484)
T ss_pred -CCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHH
Confidence 99999999999888899999995 99999999999999999999999999999999999999997 69999999999
Q ss_pred HHHhhc-ccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q psy10608 296 VGAAFG-AAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372 (445)
Q Consensus 296 v~~~f~-~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~ 372 (445)
++++|. |+||.|++++|+ +||+ +|+|+++|.+++.++++|||.++ +++||++++++++++.++|++++++ ++++
T Consensus 240 ~~~~f~~~aGQ~C~a~~rv-~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~ 316 (484)
T PLN02203 240 VGGKWGSCAGQACIAIDYV-LVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIV 316 (484)
T ss_pred HHHhcccCCCCccccCCeE-EEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEE
Confidence 999996 899999999999 8887 69999999999999999999885 6899999999999999999999987 7899
Q ss_pred eCCccc--------e-----------------------------------------------------------------
Q psy10608 373 LDGRNL--------K----------------------------------------------------------------- 379 (445)
Q Consensus 373 ~GG~~~--------~----------------------------------------------------------------- 379 (445)
+||... .
T Consensus 317 ~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G 396 (484)
T PLN02203 317 HGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSG 396 (484)
T ss_pred eCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcc
Confidence 987421 0
Q ss_pred -EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccccccccccccC
Q psy10608 380 -VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAV 439 (445)
Q Consensus 380 -V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~ 439 (445)
|+||++... ..+.+||||+|+||+| +++|++|+++||+.|+|+.....-+...++|++
T Consensus 397 ~V~IN~~~~~~~~~~~PfGG~k~SG~G--r~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~ 456 (484)
T PLN02203 397 SVTFNDAIIQYACDSLPFGGVGESGFG--RYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPW 456 (484)
T ss_pred eEEECCcccccCCCCCCCCCcCcccCC--ccccHHHHHHhcceeEEEEcCccCcccccCCCC
Confidence 999986432 2367899999999999 569999999999999998765322223345544
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-72 Score=582.57 Aligned_cols=332 Identities=24% Similarity=0.320 Sum_probs=303.3
Q ss_pred eeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhh--cCCCHHHH----HHHHHHHHHHHHHh
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETW--SKTSIITR----QQVLFRLQNIIKAN 105 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~ 105 (445)
+||+|+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+.| +.++..+| .++|.++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4799999875 4679999999999999999999999999999999999998 55779999 89999999999999
Q ss_pred --HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccc--cccCCCCceeEEEecCCeEEEECCCCcchhh
Q psy10608 106 --MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL--AGVAKDMDIHSYRVPLGVTAGITPFNFPAMI 181 (445)
Q Consensus 106 --~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 181 (445)
.++|++++++|+|||+.+++.|+..+++.++||++......++.. +....+...+++++|+|||++|+|||||+.+
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 599999999999999999999999999999999987665554432 2112344678999999999999999999999
Q ss_pred hHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 182 PLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 182 ~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+++.+..|+.|+++++|+||||+++|+.|..
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~ 238 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLAL 238 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996555667889999999999999999999998
Q ss_pred HhhcCCCcEEEeCCCCCeeEecCCC-CHHHHHHHHHHHhhcccCCcccccceEEEeccc---chHHHHHHHHHHhccccC
Q psy10608 262 RGAKNGKRVQSNMGAKNHGVIMSDA-NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA---VEWLPELKKRAEALKVSA 337 (445)
Q Consensus 262 ~aa~~~~~~~lElGGk~~~iV~~da-Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~---~~f~~~l~~~~~~l~vG~ 337 (445)
.++ +++++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|+ +||++ |+|+++|.++++++++|+
T Consensus 239 ~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv-~V~~~i~~d~f~~~l~~~~~~~~~g~ 314 (489)
T cd07126 239 ELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSIL-FAHENWVQAGILDKLKALAEQRKLED 314 (489)
T ss_pred HhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceE-EEeCcchHHHHHHHHHHHHHhcccCC
Confidence 876 5799999999999999999 999999999999999999999999999 77763 899999999999999874
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEeCC
Q psy10608 338 GNVPGTDLGPVISPQAKERILSLIQSGVD-EGATLLLDG 375 (445)
Q Consensus 338 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~~~~GG 375 (445)
+++||+++.. .+++.++|+++++ +||++++||
T Consensus 315 -----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG 347 (489)
T cd07126 315 -----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGG 347 (489)
T ss_pred -----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCC
Confidence 4799999998 9999999999998 899999877
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-73 Score=581.19 Aligned_cols=351 Identities=28% Similarity=0.369 Sum_probs=320.1
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccC
Q psy10608 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG 147 (445)
Q Consensus 68 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~ 147 (445)
|++.++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|++.......+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998876655444
Q ss_pred ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEE
Q psy10608 148 ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227 (445)
Q Consensus 148 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~v 227 (445)
.... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+
T Consensus 81 ~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERAT-PMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred Cccc-CCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 3322 123456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc-CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCc
Q psy10608 228 IHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306 (445)
Q Consensus 228 v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~ 306 (445)
|+|+.+.+..|++|++++.|+||||+++|+.|.+.++. .++++++|+|||||+||++|||+|.|++.+++++|.|+||.
T Consensus 160 v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~ 239 (431)
T cd07095 160 VQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQR 239 (431)
T ss_pred EeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 99977888999999999999999999999999998765 46999999999999999999999999999999999999999
Q ss_pred ccccceEEEeccc---chHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----
Q psy10608 307 CMALSTVIFVGEA---VEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---- 379 (445)
Q Consensus 307 C~a~~rvi~V~~~---~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---- 379 (445)
|++++|+ +||++ |+|+++|.++++++++|+|.++++.+||++++++++++.+++++++++||++++||....
T Consensus 240 C~a~~rv-~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~ 318 (431)
T cd07095 240 CTCARRL-IVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTA 318 (431)
T ss_pred CCCCeEE-EEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCe
Confidence 9999999 77774 999999999999999999999999999999999999999999999999999999984210
Q ss_pred ----------------------------------------------------------------------EEEeCCCCCC
Q psy10608 380 ----------------------------------------------------------------------VGINVPIPVP 389 (445)
Q Consensus 380 ----------------------------------------------------------------------V~iN~~~~~~ 389 (445)
|+||.++...
T Consensus 319 ~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~ 398 (431)
T cd07095 319 FLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGA 398 (431)
T ss_pred EEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCC
Confidence 9999765444
Q ss_pred CCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 390 LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 390 ~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
.+.+||||+|+||+| +++|++|+++| ..|++
T Consensus 399 ~~~~PfGG~k~SG~G--~~~g~~~~~~~-~~~~~ 429 (431)
T cd07095 399 SSTAPFGGVGLSGNH--RPSAYYAADYC-AYPVA 429 (431)
T ss_pred CCCCCCCCcccccCC--CCChHHHHHHH-hhhhc
Confidence 467899999999999 66999999944 44443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-72 Score=579.18 Aligned_cols=354 Identities=29% Similarity=0.468 Sum_probs=327.4
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccC
Q psy10608 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG 147 (445)
Q Consensus 68 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~ 147 (445)
|++++++.|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..++..|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999887665555
Q ss_pred ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHH-HHHHHHHHHHcCCCCcceE
Q psy10608 148 ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA-CMMLVDMLTQAGCPPGVVN 226 (445)
Q Consensus 148 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~-~~~l~~~l~~aGlP~gvv~ 226 (445)
...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+ +..|.+++.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 444422245567889999999999999999999999999999999999999999999998 5789999999999999999
Q ss_pred EEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCC
Q psy10608 227 VIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQ 305 (445)
Q Consensus 227 vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ 305 (445)
+++|+ .+.+..|+.|++++.|+||||+++|+.|+++++++++|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 240 (431)
T cd07104 161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ 240 (431)
T ss_pred EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 99985 55789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----
Q psy10608 306 RCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----- 378 (445)
Q Consensus 306 ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----- 378 (445)
.|++++|| +||+ +|+|+++|+++++.+++|+|.++++.+||++++.+++++.+++++++.+|+++++||...
T Consensus 241 ~C~a~~~v-~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~~g~~~~ 319 (431)
T cd07104 241 ICMAAGRI-LVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYEGLFYQ 319 (431)
T ss_pred CcccCcEE-EEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCceEC
Confidence 99999999 7787 599999999999999999999999999999999999999999999999999999998420
Q ss_pred -e------------------------------------------------------------------EEEeCCCCCCCC
Q psy10608 379 -K------------------------------------------------------------------VGINVPIPVPLS 391 (445)
Q Consensus 379 -~------------------------------------------------------------------V~iN~~~~~~~~ 391 (445)
. |+||+++....+
T Consensus 320 Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 399 (431)
T cd07104 320 PTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEP 399 (431)
T ss_pred CEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCC
Confidence 0 999987654446
Q ss_pred CCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 392 MFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 392 ~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 400 ~~pfgG~~~SG~g--~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 400 HVPFGGVKASGGG--RFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCcccccCC--ccchHHHHHHhhceeEEe
Confidence 7899999999999 569999999999999986
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-72 Score=578.47 Aligned_cols=352 Identities=23% Similarity=0.313 Sum_probs=320.2
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCc
Q psy10608 64 ATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIP 142 (445)
Q Consensus 64 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~ 142 (445)
.+.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++||+...
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999997 49999999999999876
Q ss_pred ccccC-cccccc---CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHc
Q psy10608 143 TIMQG-ETLAGV---AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA 218 (445)
Q Consensus 143 ~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 218 (445)
+...+ +..... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 54432 222110 1234568899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHH
Q psy10608 219 GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGA 298 (445)
Q Consensus 219 GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~ 298 (445)
|+|+|++|+++|+.+....|+.|| ++.|+||||+.+|+.|.+.++.+++|+++|+|||||+||++|||+|.|++.++++
T Consensus 161 ~lP~g~v~vv~g~~~~~~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~ 239 (436)
T cd07135 161 YLDPDAFQVVQGGVPETTALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWG 239 (436)
T ss_pred hCCcCEEEEEcCCchhHHHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHH
Confidence 699999999999655566799999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q psy10608 299 AFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376 (445)
Q Consensus 299 ~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 376 (445)
+|.|+||.|++++|| +||+ +|+|+++|.++++++++|+| ++++.+||++++++++++.++|+++ |+++++||.
T Consensus 240 ~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~ 314 (436)
T cd07135 240 KFGNAGQICVAPDYV-LVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE 314 (436)
T ss_pred HhccCCceecCCCEE-eccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC
Confidence 999999999999999 8888 69999999999999999999 8999999999999999999999987 889999985
Q ss_pred cce--------------------------------------------------------------------------EEE
Q psy10608 377 NLK--------------------------------------------------------------------------VGI 382 (445)
Q Consensus 377 ~~~--------------------------------------------------------------------------V~i 382 (445)
... |+|
T Consensus 315 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~i 394 (436)
T cd07135 315 MDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVI 394 (436)
T ss_pred cCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEE
Confidence 310 999
Q ss_pred eCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 383 NVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 383 N~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+.... ..+.+||||+|+||+| +++|++|+++||+.|+|+
T Consensus 395 N~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 395 NDTLIHVGVDNAPFGGVGDSGYG--AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CCccccccCCCCCcCCcCcccCC--ccccHhHHHHhccccccc
Confidence 976432 3467899999999999 569999999999999874
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-72 Score=576.55 Aligned_cols=349 Identities=30% Similarity=0.448 Sum_probs=321.3
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccC
Q psy10608 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG 147 (445)
Q Consensus 68 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~ 147 (445)
|+++++++|++||+.|++++.++|.++|+++++.|+++.++|++++++|+|||..+++.|+..+++.++|++...+...+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999988888999999999999987665434
Q ss_pred ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEE
Q psy10608 148 ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNV 227 (445)
Q Consensus 148 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~v 227 (445)
...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 43332223445678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCh----hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhccc
Q psy10608 228 IHGAH----DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAA 303 (445)
Q Consensus 228 v~g~~----~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~ 303 (445)
++|+. +++..|+.||+++.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~ 240 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence 99842 46789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---
Q psy10608 304 GQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL--- 378 (445)
Q Consensus 304 GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~--- 378 (445)
||.|++++|+ +||+ +|+|+++|.++++++++| ++++||++++.+++++.++|++++++|+++++||...
T Consensus 241 GQ~C~a~~~v-~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 314 (432)
T cd07105 241 GQICMSTERI-IVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESP 314 (432)
T ss_pred CCCCcCCceE-EEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCC
Confidence 9999999999 8888 699999999999999988 5789999999999999999999999999999998532
Q ss_pred -e------------------------------------------------------------------------EEEeCC
Q psy10608 379 -K------------------------------------------------------------------------VGINVP 385 (445)
Q Consensus 379 -~------------------------------------------------------------------------V~iN~~ 385 (445)
. |+||++
T Consensus 315 ~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~ 394 (432)
T cd07105 315 SGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGM 394 (432)
T ss_pred CCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCC
Confidence 0 999987
Q ss_pred CCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 386 IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 386 ~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
+....+.+||||+|+||+| +++|++|+++|++.|+|+
T Consensus 395 ~~~~~~~~PfgG~~~SG~G--~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 395 TVHDEPTLPHGGVKSSGYG--RFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCCCCCCCCCccccccc--ccChHHHHHHhhceEEEe
Confidence 6444467999999999999 569999999999999986
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-71 Score=580.05 Aligned_cols=368 Identities=23% Similarity=0.319 Sum_probs=325.7
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCc
Q psy10608 64 ATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIP 142 (445)
Q Consensus 64 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~ 142 (445)
.+.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+|||..++.. |+..+++.++|+++..
T Consensus 4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~ 83 (493)
T PTZ00381 4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL 83 (493)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999864 9999999999887654
Q ss_pred cc-ccCccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC
Q psy10608 143 TI-MQGETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG 219 (445)
Q Consensus 143 ~~-~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG 219 (445)
+. +..+.... .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~- 162 (493)
T PTZ00381 84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY- 162 (493)
T ss_pred HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-
Confidence 33 22222211 112245788999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHh
Q psy10608 220 CPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAA 299 (445)
Q Consensus 220 lP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~ 299 (445)
+|+|++++|+|+.+.+..|+.++ +|+|+||||+++|+.|+++++++++|+++|||||||+||++|||++.|++.+++++
T Consensus 163 lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~ 241 (493)
T PTZ00381 163 LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGK 241 (493)
T ss_pred CCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHH
Confidence 99999999999888889999987 99999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc
Q psy10608 300 FGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN 377 (445)
Q Consensus 300 f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 377 (445)
|.|+||.|++++|+ +||+ +|+|+++|++.+++++ |++.++++++||+++.++++++.++|+ ++|+++++||..
T Consensus 242 ~~naGQ~C~A~~~v-lV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~ 316 (493)
T PTZ00381 242 FLNAGQTCVAPDYV-LVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV 316 (493)
T ss_pred HhhcCCcCCCCCEE-EEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc
Confidence 99999999999999 7777 5999999999999986 666678899999999999999999996 469999999853
Q ss_pred ce--------------------------------------------------------------------------EEEe
Q psy10608 378 LK--------------------------------------------------------------------------VGIN 383 (445)
Q Consensus 378 ~~--------------------------------------------------------------------------V~iN 383 (445)
.. |+||
T Consensus 317 ~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN 396 (493)
T PTZ00381 317 DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVIN 396 (493)
T ss_pred CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 10 9999
Q ss_pred CCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec--cccccccccccCC
Q psy10608 384 VPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW--RESDVTHSKAAVS 440 (445)
Q Consensus 384 ~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~--~~~~~~~~~~~~~ 440 (445)
++... ..+.+||||+|+||+| +++|++|+++||+.|+|+... ........+|+|.
T Consensus 397 ~~~~~~~~~~~PFGG~g~SG~G--~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~~ 454 (493)
T PTZ00381 397 DCVFHLLNPNLPFGGVGNSGMG--AYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYT 454 (493)
T ss_pred CccccccCCCCCCCCcCccccc--ccchHHHHHhccceeEEEEccccccCcccccCCCCC
Confidence 86532 3467999999999999 679999999999999998764 2223345677763
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-72 Score=622.76 Aligned_cols=375 Identities=26% Similarity=0.359 Sum_probs=342.7
Q ss_pred ceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
...|+|+. ..+..++++||+| ++++++++.++.+|++.|+++|++||+.|+.+|..+|+++|++++++|++++++|
T Consensus 648 ~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL 724 (1318)
T PRK11809 648 APMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTL 724 (1318)
T ss_pred CCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 34567732 2356789999998 7999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHH
Q psy10608 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA 189 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 189 (445)
+.++++|+|||+.++..||..++++|+||+..++... ....++|+|||++|+|||||+.++++++++|
T Consensus 725 ~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaA 792 (1318)
T PRK11809 725 MGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDF------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAA 792 (1318)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCceeecccEEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999997654311 1246899999999999999999999999999
Q ss_pred hhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC-
Q psy10608 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG- 267 (445)
Q Consensus 190 LaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~- 267 (445)
|++||+||+|||+.||+++..++++|.++|+|+|++|+|+|+ ..+++.|+.||+|+.|+||||+++|+.|.+.+++++
T Consensus 793 LaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~ 872 (1318)
T PRK11809 793 LAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLD 872 (1318)
T ss_pred HHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999994 567899999999999999999999999999988776
Q ss_pred -----CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 268 -----KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 268 -----~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
+|+++|+||||++||++|||+|.|++.+++++|.++||.|++++|+ +||+ +|+|++.|+++++++++|||.+
T Consensus 873 ~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl-~V~e~Iad~fl~~L~~a~~~l~vGdP~~ 951 (1318)
T PRK11809 873 PQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVL-CLQDDVADRTLKMLRGAMAECRMGNPDR 951 (1318)
T ss_pred cccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEE-EEcHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 7999999999999999999999999999999999999999999999 7777 6999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc---------ce--------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN---------LK-------------------------------- 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~---------~~-------------------------------- 379 (445)
.++++||+|++.+++++.++|++++++|++++.||.. +.
T Consensus 952 ~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~~~~~~l 1031 (1318)
T PRK11809 952 LSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVRYNRNQL 1031 (1318)
T ss_pred ccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEEeCCCCH
Confidence 9999999999999999999999999999999987521 00
Q ss_pred -------------------------------------EEEeCCCCCCC-CCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 -------------------------------------VGINVPIPVPL-SMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~-~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
||||+...... ...||||+|.||+|. +.+|++++..|++.+
T Consensus 1032 deaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~-kaGGp~yL~~f~~~~ 1110 (1318)
T PRK11809 1032 DELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP-KAGGPLYLYRLLATR 1110 (1318)
T ss_pred HHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC-CCCCHHHHHHHhccC
Confidence 99997654322 346999999999996 479999999999987
Q ss_pred E
Q psy10608 422 T 422 (445)
Q Consensus 422 ~ 422 (445)
.
T Consensus 1111 ~ 1111 (1318)
T PRK11809 1111 P 1111 (1318)
T ss_pred C
Confidence 4
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-71 Score=566.39 Aligned_cols=329 Identities=27% Similarity=0.378 Sum_probs=303.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECC
Q psy10608 95 LFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITP 174 (445)
Q Consensus 95 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 174 (445)
|+++++.|++++++|++++++|+|||+.+++.|+..+++.++||+.+++...+...+...++...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999988776655433322234457889999999999999
Q ss_pred CCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCH
Q psy10608 175 FNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSD 253 (445)
Q Consensus 175 ~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~ 253 (445)
||||+.+.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.+..|+.|+++++|+||||+
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999 56778999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHH
Q psy10608 254 QAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAE 331 (445)
Q Consensus 254 ~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~ 331 (445)
.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|.++++
T Consensus 161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv-~V~~~i~~~f~~~l~~~~~ 239 (409)
T PRK10090 161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERV-YVQKGIYDQFVNRLGEAMQ 239 (409)
T ss_pred HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEE-EEcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7787 6999999999999
Q ss_pred hccccCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------
Q psy10608 332 ALKVSAGNVP-GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------- 379 (445)
Q Consensus 332 ~l~vG~p~~~-~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------- 379 (445)
++++|||.++ ++++|||+++++++++.++|++++++||++++||....
T Consensus 240 ~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~ 319 (409)
T PRK10090 240 AVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLP 319 (409)
T ss_pred hcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEE
Confidence 9999999998 89999999999999999999999999999999985310
Q ss_pred --------------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHH
Q psy10608 380 --------------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFY 415 (445)
Q Consensus 380 --------------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~ 415 (445)
||||+..... ...||||+|+||+| +++|++|++
T Consensus 320 v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G--~~~g~~gl~ 396 (409)
T PRK10090 320 VVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEA-MQGFHAGWRKSGIG--GADGKHGLH 396 (409)
T ss_pred EEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcccccCC--ccchHHHHH
Confidence 9999876443 45799999999999 679999999
Q ss_pred HhheeEEEEeec
Q psy10608 416 FYTETKTVTQLW 427 (445)
Q Consensus 416 ~~~~~k~v~~~~ 427 (445)
+|++.|++++.+
T Consensus 397 ~f~~~k~v~~~~ 408 (409)
T PRK10090 397 EYLQTQVVYLQS 408 (409)
T ss_pred HhcceEEEEEec
Confidence 999999998764
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-71 Score=569.36 Aligned_cols=345 Identities=24% Similarity=0.320 Sum_probs=313.1
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCc-
Q psy10608 71 SAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGE- 148 (445)
Q Consensus 71 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~- 148 (445)
+.+++|++||+.|+.+|..+|.++|++++++|++++|+|++++++|+|||+.+++. |+..+++.++|++...+...+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56889999999999999999999999999999999999999999999999999974 9999999999999876554332
Q ss_pred ccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceE
Q psy10608 149 TLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226 (445)
Q Consensus 149 ~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~ 226 (445)
..+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 22211 12345688999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCc
Q psy10608 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306 (445)
Q Consensus 227 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~ 306 (445)
+|+|+.+.+..|+.|+ |+.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.
T Consensus 161 ~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~ 239 (449)
T cd07136 161 VVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQT 239 (449)
T ss_pred EEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCc
Confidence 9999878888899776 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----e-
Q psy10608 307 CMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----K- 379 (445)
Q Consensus 307 C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----~- 379 (445)
|++++|+ +||+ +|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ ++++||... .
T Consensus 240 C~a~~rv-~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~~g~~~ 312 (449)
T cd07136 240 CVAPDYV-LVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDRETLYI 312 (449)
T ss_pred ccCCCEE-EEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCCCCCEE
Confidence 9999999 8888 6999999999999999999987 88999999999999999999874 788987431 0
Q ss_pred ---------------------------------------------------------------------EEEeCCCCC-C
Q psy10608 380 ---------------------------------------------------------------------VGINVPIPV-P 389 (445)
Q Consensus 380 ---------------------------------------------------------------------V~iN~~~~~-~ 389 (445)
||||+.... .
T Consensus 313 ~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~ 392 (449)
T cd07136 313 EPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLA 392 (449)
T ss_pred eeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccc
Confidence 999976432 2
Q ss_pred CCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 390 LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 390 ~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
.+.+||||+|+||+| +++|++|+++||+.|+|++.
T Consensus 393 ~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 393 NPYLPFGGVGNSGMG--SYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred CCCCCccCcCcccCC--cccCHHHHHHhccceEEEEc
Confidence 367899999999999 56999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-71 Score=566.90 Aligned_cols=347 Identities=21% Similarity=0.288 Sum_probs=313.6
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCc-
Q psy10608 71 SAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGE- 148 (445)
Q Consensus 71 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~- 148 (445)
+++++|++||+.|+.++..+|.++|++++++|++++|+|++++++|+|||+.++. .|+..+++.++||+.......+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999999999999999999999999986 49999999999998765443221
Q ss_pred c--ccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceE
Q psy10608 149 T--LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226 (445)
Q Consensus 149 ~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~ 226 (445)
. .+........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 111112234678999999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred EEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhh-cccCC
Q psy10608 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAF-GAAGQ 305 (445)
Q Consensus 227 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f-~~~GQ 305 (445)
+|+|+.+.+..|+.| .++.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||+|.|++.+++++| .|+||
T Consensus 162 ~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ 240 (432)
T cd07137 162 VIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240 (432)
T ss_pred EEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCC
Confidence 999987888889987 5999999999999999999999999999999999999999999999999999999999 59999
Q ss_pred cccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----
Q psy10608 306 RCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----- 378 (445)
Q Consensus 306 ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----- 378 (445)
.|++++|+ +||+ +|+|+++|.++++++++||| ++++++|||+++++++++.++|+++++ |+++++||...
T Consensus 241 ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~~~g~~ 317 (432)
T cd07137 241 ACIAPDYV-LVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERDEKNLY 317 (432)
T ss_pred cccCCCEE-EEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcCCCCCE
Confidence 99999999 7787 69999999999999999999 468899999999999999999999998 89999988521
Q ss_pred ---e------------------------------------------------------------------EEEeCCCCC-
Q psy10608 379 ---K------------------------------------------------------------------VGINVPIPV- 388 (445)
Q Consensus 379 ---~------------------------------------------------------------------V~iN~~~~~- 388 (445)
. |+||++...
T Consensus 318 ~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~ 397 (432)
T cd07137 318 IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQY 397 (432)
T ss_pred EeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccc
Confidence 0 999986532
Q ss_pred CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 389 PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 389 ~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
..+.+||||+|+||+| +++|.+++++|++.|+++
T Consensus 398 ~~~~~PfGG~k~SG~G--~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 398 AIDTLPFGGVGESGFG--AYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cCCCCCCCCcCcCcCC--ccccHHHHHHhccCceee
Confidence 2367899999999999 569999999999999986
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-71 Score=616.10 Aligned_cols=379 Identities=26% Similarity=0.337 Sum_probs=346.2
Q ss_pred ceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQL 109 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (445)
..+|+|+... +..++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus 556 ~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL 632 (1208)
T PRK11905 556 APLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPEL 632 (1208)
T ss_pred cceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4456665442 45689999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHH
Q psy10608 110 AENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA 189 (445)
Q Consensus 110 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 189 (445)
+.++++|+||++.++..||..++++++||+...+...+ ...++|+|||++|+|||||+.++++++++|
T Consensus 633 ~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aA 700 (1208)
T PRK11905 633 FALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAA 700 (1208)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999986543321 135789999999999999999999999999
Q ss_pred hhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC--
Q psy10608 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN-- 266 (445)
Q Consensus 190 LaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~-- 266 (445)
|++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|+ .++++.|+.||+|+.|+||||+++|+.|.+.++.+
T Consensus 701 LaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~ 780 (1208)
T PRK11905 701 LVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSG 780 (1208)
T ss_pred HHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999995 45889999999999999999999999999998876
Q ss_pred -CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 267 -GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 267 -~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
.+|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+ +||+ +|+|+++|+++++++++|||.+.++
T Consensus 781 ~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl-~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t 859 (1208)
T PRK11905 781 PPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVL-CLQEDVADRVLTMLKGAMDELRIGDPWRLST 859 (1208)
T ss_pred CCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEE-EEehhHHHHHHHHHHHHHHHhcCCCchhccC
Confidence 48999999999999999999999999999999999999999999999 7777 6999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc------ce--------------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRN------LK-------------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~------~~-------------------------------------- 379 (445)
++||+|++.+++++.++|++++++|+.++.|+.. ..
T Consensus 860 ~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dldeaI~ 939 (1208)
T PRK11905 860 DVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADELDRVID 939 (1208)
T ss_pred CccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCCHHHHHH
Confidence 9999999999999999999999999988876521 00
Q ss_pred --------------------------------EEEeCCCCCCC-CCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 --------------------------------VGINVPIPVPL-SMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~-~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||+...... ...||||+|.||+|+ +.+|+++|+.|++.|++.+.
T Consensus 940 ~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~-kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 940 DINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP-KAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC-cCCCHHHHHHHhhcceeecc
Confidence 99998654322 357999999999996 47999999999999999754
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-70 Score=560.93 Aligned_cols=346 Identities=24% Similarity=0.342 Sum_probs=311.1
Q ss_pred HHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-hHhhh-HHHHHHHHHHHHHccCcccccCcc
Q psy10608 72 AVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKT-LADAE-GDVLRGLQVVEQCCSIPTIMQGET 149 (445)
Q Consensus 72 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~ 149 (445)
.+++|++||+.|+.+|+.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.++|++.......+..
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56764 599999999999987655432222
Q ss_pred c-cc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceE
Q psy10608 150 L-AG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226 (445)
Q Consensus 150 ~-~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~ 226 (445)
. .. ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++ +|+|+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~ 161 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA 161 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 10 112345688999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred EEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCc
Q psy10608 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306 (445)
Q Consensus 227 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~ 306 (445)
+|+|+.+.++.|+.++ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 162 ~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~ 240 (434)
T cd07133 162 VVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQT 240 (434)
T ss_pred EEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCc
Confidence 9999878888888776 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------
Q psy10608 307 CMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------ 378 (445)
Q Consensus 307 C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------ 378 (445)
|++++|| +||+ +|+|+++|+++++++++|+ ++++++||++++.+++++.++|++++++|+++++||...
T Consensus 241 C~a~~rv-~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g 317 (434)
T cd07133 241 CVAPDYV-LVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAAT 317 (434)
T ss_pred ccCCCEE-EEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCC
Confidence 9999999 8887 6999999999999999886 467899999999999999999999999999999987431
Q ss_pred -e----------------------------------------------------------------------EEEeCCCC
Q psy10608 379 -K----------------------------------------------------------------------VGINVPIP 387 (445)
Q Consensus 379 -~----------------------------------------------------------------------V~iN~~~~ 387 (445)
. |+||.+..
T Consensus 318 ~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~ 397 (434)
T cd07133 318 RKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLL 397 (434)
T ss_pred cEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 0 99998642
Q ss_pred -CCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 388 -VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 388 -~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
...+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 398 ~~~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 398 HVAQDDLPFGGVGASGMG--AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred ccCCCCCCcCCCCcccCC--CcCCHHHHHHhcccceec
Confidence 23367899999999999 569999999999999985
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-69 Score=558.08 Aligned_cols=349 Identities=22% Similarity=0.313 Sum_probs=317.4
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccC-c
Q psy10608 71 SAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQG-E 148 (445)
Q Consensus 71 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~-~ 148 (445)
+++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++.......+ .
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999997 6999999999998876433222 2
Q ss_pred ccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceE
Q psy10608 149 TLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226 (445)
Q Consensus 149 ~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~ 226 (445)
... ....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++.++ +|+|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 121 1113445789999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCc
Q psy10608 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306 (445)
Q Consensus 227 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~ 306 (445)
+++|+.+.+..|+.|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 161 ~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~ 239 (433)
T cd07134 161 VFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQT 239 (433)
T ss_pred EEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCc
Confidence 9999888889999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEecc--cchHHHHHHHHHHhccccCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----
Q psy10608 307 CMALSTVIFVGE--AVEWLPELKKRAEALKVSAG-NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---- 379 (445)
Q Consensus 307 C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---- 379 (445)
|++++|+ |||+ +|+|+++|++++++++.|+| .+.++++||++++.+++++.++|++++++||++++||....
T Consensus 240 C~a~~rv-~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~ 318 (433)
T cd07134 240 CIAPDYV-FVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRY 318 (433)
T ss_pred ccCCcEE-EECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCE
Confidence 9999999 8887 69999999999999988887 78889999999999999999999999999999999985210
Q ss_pred ----------------------------------------------------------------------EEEeCCCCC-
Q psy10608 380 ----------------------------------------------------------------------VGINVPIPV- 388 (445)
Q Consensus 380 ----------------------------------------------------------------------V~iN~~~~~- 388 (445)
||||+++..
T Consensus 319 ~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~ 398 (433)
T cd07134 319 IAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHF 398 (433)
T ss_pred EeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence 999986532
Q ss_pred CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 389 PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 389 ~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
..+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 399 ~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 399 LNPNLPFGGVNNSGIG--SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CCCCCCCCCcCcccCC--CcCcHHHHHHhcccceee
Confidence 3467899999999999 569999999999999985
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-69 Score=554.22 Aligned_cols=347 Identities=22% Similarity=0.289 Sum_probs=310.2
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCcc
Q psy10608 71 SAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGET 149 (445)
Q Consensus 71 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~ 149 (445)
+|+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|+++..+...+..
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 599999999999887655432221
Q ss_pred cccc---CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceE
Q psy10608 150 LAGV---AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226 (445)
Q Consensus 150 ~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~ 226 (445)
.... ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 1101 11235688999999999999999999999999999999999999999999999999999999986 9999999
Q ss_pred EEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCc
Q psy10608 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306 (445)
Q Consensus 227 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~ 306 (445)
+++|+.+.+..|+. ++||.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 161 vv~g~~~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~ 239 (443)
T cd07132 161 VVLGGVEETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQT 239 (443)
T ss_pred EEeCCHHHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence 99997777777776 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-----
Q psy10608 307 CMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK----- 379 (445)
Q Consensus 307 C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~----- 379 (445)
|++++|| +||+ +|+|+++|.+++++++.|+| ++++++||++++++++++.+++++ +++++||....
T Consensus 240 C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~~~~~~ 312 (443)
T cd07132 240 CIAPDYV-LCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDEKERYI 312 (443)
T ss_pred eeCCcEE-EEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCCCCCEE
Confidence 9999999 8888 69999999999999998988 678899999999999999999974 48888885310
Q ss_pred ---------------------------------------------------------------------EEEeCCCCC-C
Q psy10608 380 ---------------------------------------------------------------------VGINVPIPV-P 389 (445)
Q Consensus 380 ---------------------------------------------------------------------V~iN~~~~~-~ 389 (445)
||||++... .
T Consensus 313 ~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 392 (443)
T cd07132 313 APTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYT 392 (443)
T ss_pred eeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccC
Confidence 999986533 2
Q ss_pred CCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 390 LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 390 ~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
.+.+||||+|+||+| +++|++|+++|++.|++++.+.
T Consensus 393 ~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 393 LDSLPFGGVGNSGMG--AYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred CCCCCCCCCCcccCC--CcccHHHHHHhccccEEEEccc
Confidence 357899999999999 5699999999999999987653
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-67 Score=543.25 Aligned_cols=343 Identities=26% Similarity=0.368 Sum_probs=307.3
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccC-c
Q psy10608 71 SAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQG-E 148 (445)
Q Consensus 71 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~-~ 148 (445)
.++++|++||+.|+.+|+.+|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.......+ .
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999987775 4999999999999876554322 2
Q ss_pred ccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceE
Q psy10608 149 TLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVN 226 (445)
Q Consensus 149 ~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~ 226 (445)
... ....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.+ |+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 111 011234568899999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred EEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCc
Q psy10608 227 VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306 (445)
Q Consensus 227 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~ 306 (445)
+++|+.+.+..|+.|| ++.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.
T Consensus 161 vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~ 239 (426)
T cd07087 161 VVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQT 239 (426)
T ss_pred EEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCc
Confidence 9999877889999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------
Q psy10608 307 CMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------ 378 (445)
Q Consensus 307 C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------ 378 (445)
|++++|| +||+ +|+|+++|.+++++++.|+| ++++++||++++.+.+++.++++++ ++++||...
T Consensus 240 C~a~~rv-~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~~g~~~ 312 (426)
T cd07087 240 CIAPDYV-LVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVDKEERYI 312 (426)
T ss_pred cccCCEE-EEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCCCCCEE
Confidence 9999999 7887 69999999999999986666 4688999999999999999999865 788877421
Q ss_pred --e------------------------------------------------------------------EEEeCCCC-CC
Q psy10608 379 --K------------------------------------------------------------------VGINVPIP-VP 389 (445)
Q Consensus 379 --~------------------------------------------------------------------V~iN~~~~-~~ 389 (445)
. |+||++.. ..
T Consensus 313 ~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~ 392 (426)
T cd07087 313 APTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAA 392 (426)
T ss_pred eeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccC
Confidence 0 99998643 23
Q ss_pred CCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 390 LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 390 ~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
.+.+||||+|.||+| +++|++|+++|++.|+++
T Consensus 393 ~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 393 IPNLPFGGVGNSGMG--AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCCCCCCCCCcccCC--CccCHHHHHHhccceeec
Confidence 467899999999999 569999999999999875
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-64 Score=528.09 Aligned_cols=315 Identities=20% Similarity=0.269 Sum_probs=281.2
Q ss_pred eecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH--
Q psy10608 49 LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-- 126 (445)
Q Consensus 49 ~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-- 126 (445)
=+||+|++++++++.++. ++++++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||+.+++.
T Consensus 69 e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~g 145 (551)
T TIGR02288 69 ERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAG 145 (551)
T ss_pred ccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhcc
Confidence 459999999999999985 899999999999999999999999999999999999999999999999999998853
Q ss_pred ---HHHHHHHHHHHHccCcccccCccc---cccCCC---CceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEE
Q psy10608 127 ---DVLRGLQVVEQCCSIPTIMQGETL---AGVAKD---MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197 (445)
Q Consensus 127 ---ev~~~~~~l~~~a~~~~~~~~~~~---~~~~~~---~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VV 197 (445)
++.+.++.++|+++....+.++.. +....+ ...+..++|+|||++|+|||||+++.++++++||++||+||
T Consensus 146 kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VV 225 (551)
T TIGR02288 146 GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVL 225 (551)
T ss_pred ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEE
Confidence 788899999998877655544332 211111 12234789999999999999999999999999999999999
Q ss_pred EeCCCCChHHHH----HHHHHHHHcCCCCcceEEEeC--ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEE
Q psy10608 198 IKPSERDPGACM----MLVDMLTQAGCPPGVVNVIHG--AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQ 271 (445)
Q Consensus 198 lKps~~~p~~~~----~l~~~l~~aGlP~gvv~vv~g--~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~ 271 (445)
+|||+.+|+++. .+.++|.++|+|+|+||+|+| +.++++.|+.||+|++|+||||+++|+.|.+.++ .++++
T Consensus 226 lKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~ 303 (551)
T TIGR02288 226 VKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVY 303 (551)
T ss_pred EECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEE
Confidence 999999999655 677999999999999999998 3568899999999999999999999999999876 37999
Q ss_pred EeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc-----------cchHHHHHHHHHHhccccCCCC
Q psy10608 272 SNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE-----------AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 272 lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~-----------~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
+|||||||+||++|||+|.+++.+++++|.|+||.|++++|+ |||+ +|+|+++|+++++++ +|||.+
T Consensus 304 lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri-~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~ 381 (551)
T TIGR02288 304 TEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAI-LVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPAR 381 (551)
T ss_pred eecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEE-EEeccccccccchhHHHHHHHHHHHHHHHh-cCCccc
Confidence 999999999999999999999999999999999999999999 6665 499999999999999 999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCC
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG 375 (445)
+++++|||+++++++++ ++++++| ++++||
T Consensus 382 ~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG 411 (551)
T TIGR02288 382 ATAVLGAIQSPDTLARI----AEARALG-EVLLAS 411 (551)
T ss_pred ccccccCcCCHHHHHHH----HHHHhCC-CEEEcC
Confidence 99999999999999995 6677788 555554
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-63 Score=515.19 Aligned_cols=352 Identities=36% Similarity=0.544 Sum_probs=324.9
Q ss_pred HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcc
Q psy10608 70 ESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149 (445)
Q Consensus 70 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~ 149 (445)
++++++|++|++.|+.++.++|.++|+++++.|.+++++|+++++.|+||+..+++.|+..+++.+++++...+.+.+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999887766554433
Q ss_pred ccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEe
Q psy10608 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229 (445)
Q Consensus 150 ~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~ 229 (445)
......+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 22233456678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChh-hhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCccc
Q psy10608 230 GAHD-AVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCM 308 (445)
Q Consensus 230 g~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~ 308 (445)
|+.+ .+..|+.|++++.|.||||..+++.|.+.++++++|+++|+||++++||++|+|++.+++.+++++|.++||.|+
T Consensus 161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~ 240 (432)
T cd07078 161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240 (432)
T ss_pred cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence 9654 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----e---
Q psy10608 309 ALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----K--- 379 (445)
Q Consensus 309 a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----~--- 379 (445)
++++| +||+ +++|+++|.++++++++|+|.++++++||++++.+++++.++|+++.++|+++++||... .
T Consensus 241 a~~~i-~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~ 319 (432)
T cd07078 241 AASRL-LVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFV 319 (432)
T ss_pred CCceE-EEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEE
Confidence 99999 7777 599999999999999999999999999999999999999999999999999999987521 0
Q ss_pred ---------------------------------------------------------------------EEEeCCCCCCC
Q psy10608 380 ---------------------------------------------------------------------VGINVPIPVPL 390 (445)
Q Consensus 380 ---------------------------------------------------------------------V~iN~~~~~~~ 390 (445)
|+||+......
T Consensus 320 ~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~ 399 (432)
T cd07078 320 PPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAE 399 (432)
T ss_pred ccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCC
Confidence 99998765435
Q ss_pred CCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 391 SMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 391 ~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
+..||||+|.||+| +++|++|+++|++.|+++
T Consensus 400 ~~~pfgG~~~sg~g--~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 400 PSAPFGGVKQSGIG--REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCcCCcCcCcCC--ccchHHHHHHhhceEEEE
Confidence 78999999999999 679999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-63 Score=521.94 Aligned_cols=325 Identities=20% Similarity=0.241 Sum_probs=287.7
Q ss_pred eCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q psy10608 40 ESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGK 119 (445)
Q Consensus 40 ~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 119 (445)
++.++...+++||+|++++++++.+ |++.++++|++||+.|+++++.+|.++|++++++|++++++|++++++|+||
T Consensus 60 ~~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk 136 (549)
T cd07127 60 PGASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQ 136 (549)
T ss_pred CCCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCC
Confidence 3445678999999999999999987 8999999999999999999999999999999999999999999999999999
Q ss_pred ChHhhhH-----HHHHHHHHHHHHccCcccccCccc---cccC---CCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 120 TLADAEG-----DVLRGLQVVEQCCSIPTIMQGETL---AGVA---KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 120 ~~~~a~~-----ev~~~~~~l~~~a~~~~~~~~~~~---~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
++.++.. |++++++.++|+++....+.++.. +... ........++|+||+++|+|||||+++.+.++++
T Consensus 137 ~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ 216 (549)
T cd07127 137 AFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFA 216 (549)
T ss_pred CHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHH
Confidence 9988752 899999999999876655433221 1010 1112245789999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHH----HHHHHHHHHcCCCCcceEEEeCC--hhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 189 AIACGNTHVIKPSERDPGAC----MMLVDMLTQAGCPPGVVNVIHGA--HDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~----~~l~~~l~~aGlP~gvv~vv~g~--~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
||++||+||+|||+.+|+++ ..+.++|.++|+|+|+||+|+|+ .++++.|+.||++++|.||||+.+|+.|.+.
T Consensus 217 ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~ 296 (549)
T cd07127 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEAN 296 (549)
T ss_pred HHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999876 45668999999999999999984 4688999999999999999999999999999
Q ss_pred hhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc-----------cchHHHHHHHHHH
Q psy10608 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE-----------AVEWLPELKKRAE 331 (445)
Q Consensus 263 aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~-----------~~~f~~~l~~~~~ 331 (445)
++. +++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+ |||+ +|+|+++|+++++
T Consensus 297 a~~--~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri-~V~~s~i~~~~g~~i~d~f~~~L~~~~~ 373 (549)
T cd07127 297 ARQ--AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNI-YVPRDGIQTDDGRKSFDEVAADLAAAID 373 (549)
T ss_pred hcc--CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEE-EEECCccccccchhHHHHHHHHHHHHHH
Confidence 874 7999999999999999999999999999999999999999999999 6775 4999999999999
Q ss_pred hccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q psy10608 332 ALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376 (445)
Q Consensus 332 ~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 376 (445)
++ +|||.+..+.+|||+++.+++++.+ +++.|+ +++||.
T Consensus 374 ~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~ 412 (549)
T cd07127 374 GL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASE 412 (549)
T ss_pred Hh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCC
Confidence 99 9999999999999999999999864 556675 777653
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >KOG2454|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-64 Score=479.48 Aligned_cols=381 Identities=26% Similarity=0.385 Sum_probs=347.0
Q ss_pred CCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh
Q psy10608 42 KATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL 121 (445)
Q Consensus 42 ~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 121 (445)
.+.++++++.|+||+.++.++.-++.|+++-+..|++|+++|.+.+...|.++|+.+.+.|.+|.|.+++..++|+||+.
T Consensus 61 ~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTm 140 (583)
T KOG2454|consen 61 QSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTM 140 (583)
T ss_pred CCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchh
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhh-hHHHHHHHHHHHHHccCc-ccccCccccccC--CCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEE
Q psy10608 122 ADA-EGDVLRGLQVVEQCCSIP-TIMQGETLAGVA--KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197 (445)
Q Consensus 122 ~~a-~~ev~~~~~~l~~~a~~~-~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VV 197 (445)
-+| .+|+-.+.+-+.|..... +++.++..+... --...++.++|+||++.|.|||||+.+.+..++.||.+||++|
T Consensus 141 vDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIV 220 (583)
T KOG2454|consen 141 VDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIV 220 (583)
T ss_pred hhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEE
Confidence 886 569999999999876554 344444443211 1134678999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHH----HHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEe
Q psy10608 198 IKPSERDPGACMMLVDM----LTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN 273 (445)
Q Consensus 198 lKps~~~p~~~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lE 273 (445)
+|-|+.+.++.....++ |+..|-|+++|+++++-++.+++|++|+.++++.|.||+.+++.|++.+++.++|+++|
T Consensus 221 vK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lE 300 (583)
T KOG2454|consen 221 VKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLE 300 (583)
T ss_pred EEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEe
Confidence 99999999887655554 56679999999999998899999999999999999999999999999999999999999
Q ss_pred CCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCH
Q psy10608 274 MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISP 351 (445)
Q Consensus 274 lGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~ 351 (445)
||||+++||++|+|++..+..++++.|..+||.|...+|+ +||+ ||.|+..|..+++.++.|.|+..+.+||.|++.
T Consensus 301 LGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~-iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~ 379 (583)
T KOG2454|consen 301 LGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERF-IVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQ 379 (583)
T ss_pred ecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEE-EEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhc
Confidence 9999999999999999999999999999999999999999 6666 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------------
Q psy10608 352 QAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------------- 379 (445)
Q Consensus 352 ~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------------- 379 (445)
.++|.++.+|+||+++||+++.||.++.
T Consensus 380 nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s 459 (583)
T KOG2454|consen 380 NRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDS 459 (583)
T ss_pred cchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCC
Confidence 9999999999999999999999998642
Q ss_pred ---------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ---------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ---------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|.||+-..+-..++||||.|.||+| |+.|.+||+...+.|+|-.
T Consensus 460 ~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG--rFaG~EGLrg~Cn~Ksv~y 530 (583)
T KOG2454|consen 460 RFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG--RFAGIEGLRGCCNVKSVAY 530 (583)
T ss_pred cccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc--ccccHHHHHHHhcccceec
Confidence 9999865554578999999999999 7899999999999999953
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-63 Score=516.17 Aligned_cols=342 Identities=20% Similarity=0.254 Sum_probs=298.6
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCccccc--
Q psy10608 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ-- 146 (445)
Q Consensus 69 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~-- 146 (445)
+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++|++...+...
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred Ccccccc------CCCCceeEEEecCCeEEEECCCCcchhh--hHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHH---
Q psy10608 147 GETLAGV------AKDMDIHSYRVPLGVTAGITPFNFPAMI--PLWMFPVAIACGNTHVIKPSERDPGACMMLVDML--- 215 (445)
Q Consensus 147 ~~~~~~~------~~~~~~~~~~~P~GVv~~I~p~N~P~~~--~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l--- 215 (445)
+...... .++...+.+++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 2211100 1123457889999999999999999988 5589999999999999999999999999988877
Q ss_pred -HHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc--CCCcEEEeCCCCCeeEecCCC---CH
Q psy10608 216 -TQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK--NGKRVQSNMGAKNHGVIMSDA---NR 288 (445)
Q Consensus 216 -~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~--~~~~~~lElGGk~~~iV~~da---Dl 288 (445)
.++|+|+|+||+|+| +.+.+..|++||+|++|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+ |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 489999999999999 45788999999999999999999999999999988 699999999999999999999 89
Q ss_pred HHHHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy10608 289 SNTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGV 365 (445)
Q Consensus 289 ~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 365 (445)
|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++| |++++.+.+++.++|++++
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv-~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~ 309 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLV-LVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALA 309 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceE-EEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 6665 499999999999988754 6777777888889999999
Q ss_pred Hc-CCEEEeCCccc------------------e-----------------------------------------------
Q psy10608 366 DE-GATLLLDGRNL------------------K----------------------------------------------- 379 (445)
Q Consensus 366 ~~-Ga~~~~GG~~~------------------~----------------------------------------------- 379 (445)
++ |+++++||... .
T Consensus 310 ~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 389 (454)
T cd07129 310 AAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL 389 (454)
T ss_pred hcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence 98 99999998431 0
Q ss_pred ----------------EEEeCCCCCCC--CCCccCC-CCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 ----------------VGINVPIPVPL--SMFSFTG-SRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 ----------------V~iN~~~~~~~--~~~pfGG-~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
|+||..+.... +.+|||| +|+||+|++..+|++++++||++-
T Consensus 390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 99997643322 4789999 999999943226999999999863
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >KOG2452|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-64 Score=485.37 Aligned_cols=371 Identities=28% Similarity=0.424 Sum_probs=337.3
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
++||+|+++.+++++++..+||.|+.+|++++.++..||++|+.+|+.||+ .|.+++..+|.+.|.++++++++|.++
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee 502 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE 502 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence 689999999999999999999999999999999999999999999999998 599999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccC---CCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 109 LAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVA---KDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
|+.+.+++.|.-..-|. ..|...++.++||+++-+.++|..+|... ......+.++|+|||++|.|||||+..+.|
T Consensus 503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw 582 (881)
T KOG2452|consen 503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582 (881)
T ss_pred hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence 99999999998777664 47888999999999999999998877321 223467889999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChh-hhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHD-AVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+.+.+|++- ++| ++++ .|++|+++|+++ +++.|..||+++.|-||||+++|+.|++.|
T Consensus 583 k~aaclaa~---~~k-----------~~e~-------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 583 KTAACLAAQ---VLK-----------FAEL-------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHHHHH---Hhh-----------hhhh-------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 999999752 122 2222 589999999654 679999999999999999999999999998
Q ss_pred hc-CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 264 AK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 264 a~-~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
+. +.|++.|||||++|+||+.|||+++|+.....+.|+|-|..|.+..|+ |+.+ .|+|+.++++.++++++|+|+|
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~-fi~~sihd~fv~~~vee~~~~~ig~pld 720 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRL-FVEDSIHDEFVRRVVEEVRKMKVGNPLD 720 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcce-eehhhhhHHHHHHHHHHHHhhccCCccc
Confidence 75 789999999999999999999999999999999999999999999999 7777 5999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-----------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK----------------------------------------- 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~----------------------------------------- 379 (445)
.+|+-||.-.-.++.++.+|++.++..||++++||++..
T Consensus 721 r~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~ 800 (881)
T KOG2452|consen 721 RDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLD 800 (881)
T ss_pred ccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHH
Confidence 999999999999999999999999999999999998542
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|++|+.... +...||||+|+||+| +..|.++|.+|..+|+|
T Consensus 801 ~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~kt-dvaapfggfkqsgfg--kd~ge~alneyl~~kti 877 (881)
T KOG2452|consen 801 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKT-DVAAPFGGFKQSGFG--KDLGEAALNEYLRVKTV 877 (881)
T ss_pred HHHhhccccccccccceeecccchhhhhhhhhccceEEEeecccc-ccccCCCCccccccc--cchhHHHHhhheeeEEE
Confidence 999987543 467899999999999 56999999999999999
Q ss_pred Eee
Q psy10608 424 TQL 426 (445)
Q Consensus 424 ~~~ 426 (445)
++.
T Consensus 878 t~e 880 (881)
T KOG2452|consen 878 TFE 880 (881)
T ss_pred Eee
Confidence 874
|
|
| >KOG2456|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-63 Score=476.17 Aligned_cols=364 Identities=21% Similarity=0.283 Sum_probs=319.5
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccC-ccccc
Q psy10608 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSI-PTIMQ 146 (445)
Q Consensus 69 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~-~~~~~ 146 (445)
++..++.+|.+|.+-+..|.+.|.+.|.++...+++|+++|.+++..|.+|+..++. .|+......++|+... ..|..
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 456689999999999999999999999999999999999999999999999999885 4998888888887643 44555
Q ss_pred Ccccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcc
Q psy10608 147 GETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGV 224 (445)
Q Consensus 147 ~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gv 224 (445)
.+..+.. .--...+++.+|+|||++|+|||||+.+.+..+++||+|||+||+|||+.+|.++..|++++-+. |+.+.
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 4433311 11245788999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccC
Q psy10608 225 VNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAG 304 (445)
Q Consensus 225 v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~G 304 (445)
+.||.|+.+....|+.+ +.|+|+||||+.+|+.|+.+++++++||+||||||+|++|++|+|++-+++.|+++++.|+|
T Consensus 163 ~~VV~Ggv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~G 241 (477)
T KOG2456|consen 163 IRVVNGGVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSG 241 (477)
T ss_pred EEEecCCCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCC
Confidence 99999998878888888 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce---
Q psy10608 305 QRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK--- 379 (445)
Q Consensus 305 Q~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~--- 379 (445)
|.|.++++| +++. .+.++++++..++++. |+...+..+++-+|+..|++|+..++++- .+++.||....
T Consensus 242 QtCvapDYi-L~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~~d~ 315 (477)
T KOG2456|consen 242 QTCVAPDYI-LCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDESDR 315 (477)
T ss_pred CeeccCCeE-EecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccchhhc
Confidence 999999999 6666 4888899988888875 65556788999999999999999999853 58999997432
Q ss_pred -----------------------------------------------------------------------EEEeCCCCC
Q psy10608 380 -----------------------------------------------------------------------VGINVPIPV 388 (445)
Q Consensus 380 -----------------------------------------------------------------------V~iN~~~~~ 388 (445)
|.+|+...+
T Consensus 316 ~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H 395 (477)
T KOG2456|consen 316 YIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMH 395 (477)
T ss_pred ccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEE
Confidence 888875322
Q ss_pred -CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccccc--cccccccCCCC
Q psy10608 389 -PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD--VTHSKAAVSMP 442 (445)
Q Consensus 389 -~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~~--~~~~~~~~~~~ 442 (445)
....+||||++.|||| +++|++|++.|++.|++..+..-.+ .+.+||+++.-
T Consensus 396 ~~~~~lPFGGVG~SGmG--~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S~~ 450 (477)
T KOG2456|consen 396 VTLDSLPFGGVGESGMG--RYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYSPQ 450 (477)
T ss_pred EEeeccCcCCcCccccc--cccccccccccccchhhhhcccccchhhhhcCCCCChH
Confidence 3467899999999999 6899999999999999986654444 47889998753
|
|
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-62 Score=501.82 Aligned_cols=340 Identities=22% Similarity=0.267 Sum_probs=297.2
Q ss_pred HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccc--cC
Q psy10608 70 ESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM--QG 147 (445)
Q Consensus 70 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~--~~ 147 (445)
++|+++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||. ++..|+..+++.++||+..+... .+
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 6799999999999999999999999999999999999999999999999999 77789999999999998776532 11
Q ss_pred ccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCC-CCcc
Q psy10608 148 ETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGC-PPGV 224 (445)
Q Consensus 148 ~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGl-P~gv 224 (445)
..... .......+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 11110 11134568899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred eEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC-CHHHHHHHHHHHhhccc
Q psy10608 225 VNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA-NRSNTLNQLVGAAFGAA 303 (445)
Q Consensus 225 v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da-Dl~~a~~~iv~~~f~~~ 303 (445)
+|+|+|+.+.+..|+.||++++|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.+++.+++++|.|+
T Consensus 161 ~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~ 238 (442)
T cd07084 161 VTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACS 238 (442)
T ss_pred eEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhccc
Confidence 99999976688999999999999999999999999998875 8999999999999999999 69999999999999999
Q ss_pred CCcccccceEEEeccc---chHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEeCCccc-
Q psy10608 304 GQRCMALSTVIFVGEA---VEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDE-GATLLLDGRNL- 378 (445)
Q Consensus 304 GQ~C~a~~rvi~V~~~---~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~~~GG~~~- 378 (445)
||.|++++|+ +||++ ++|+++|.++++++++| ++.+||++++ ++.++|++++++ |+++++||...
T Consensus 239 GQ~C~a~~rl-~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~ 308 (442)
T cd07084 239 GQKCTAQSML-FVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELK 308 (442)
T ss_pred CCeecCCcEE-EEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccc
Confidence 9999999999 77763 99999999999999998 6789999765 566677788888 59999988520
Q ss_pred ---------------------------e----------------------------------------------------
Q psy10608 379 ---------------------------K---------------------------------------------------- 379 (445)
Q Consensus 379 ---------------------------~---------------------------------------------------- 379 (445)
.
T Consensus 309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~ 388 (442)
T cd07084 309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIG 388 (442)
T ss_pred cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHH
Confidence 0
Q ss_pred -------EEEeCC-CCCCCCCCccCC-CCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 -------VGINVP-IPVPLSMFSFTG-SRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 -------V~iN~~-~~~~~~~~pfGG-~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
||||.. +....+..|||| .|.||+|++ .+|.+++++||+...+
T Consensus 389 ~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~-~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 389 NLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAG-IGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHhcCeEEECCCCCCCccccccCCCCCCCCCCCcc-ccchHHhhheeeeeee
Confidence 999965 333345677766 889999952 2499999999987654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-61 Score=501.17 Aligned_cols=352 Identities=18% Similarity=0.183 Sum_probs=302.0
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccC
Q psy10608 63 KATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSI 141 (445)
Q Consensus 63 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~ 141 (445)
..+.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+.+. +.......+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4678999999999999999999999999999999999999999999999999999999888664 333455555555443
Q ss_pred cccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHH----HHHHHH
Q psy10608 142 PTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML----VDMLTQ 217 (445)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l----~~~l~~ 217 (445)
.+.. |. .. ...+...+..++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+ .+++.+
T Consensus 84 ~~~~-G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MKTI-GI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Cccc-ce-ec-CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 2222 32 22 12344567899999999999999999999999999999999999999999999999974 555589
Q ss_pred cCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHH
Q psy10608 218 AGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLV 296 (445)
Q Consensus 218 aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv 296 (445)
+|+|+|+||+|+| +.+.++.|+.||+|++|+||||+.+++.+ +..++|+++|+|||+|+||++|||+|.|++.++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 9999999999998 67888999999999999999999976554 445799999999999999999999999999999
Q ss_pred HHhhcccCCcccccceEEEecc--cchHHHHHHHH-------HHhccccCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy10608 297 GAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKR-------AEALKVSAG-NVPGTDLGPVISPQAKERILSLIQSGVD 366 (445)
Q Consensus 297 ~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~-------~~~l~vG~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 366 (445)
+++|+|+||.|++.+|+ +||+ +|+|+++|+++ .+.+++|+| .++++++||+++.++++++.+++++++.
T Consensus 237 ~sk~~~~Gq~C~a~~rl-lV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~ 315 (488)
T TIGR02518 237 DSKTFDNGTICASEQSI-IVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVP 315 (488)
T ss_pred HHHhcCCCCCCCCCCEE-EEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccC
Confidence 99999999999999999 7777 69999999998 899999996 6788999999999999999999999999
Q ss_pred cCCEEEeCCccc-e---------------------------------------------------------------EEE
Q psy10608 367 EGATLLLDGRNL-K---------------------------------------------------------------VGI 382 (445)
Q Consensus 367 ~Ga~~~~GG~~~-~---------------------------------------------------------------V~i 382 (445)
+|+++++||... . |||
T Consensus 316 ~gakll~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~V 395 (488)
T TIGR02518 316 EDAKVLIGEQNGVGNKNPYSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLV 395 (488)
T ss_pred CCCEEEEeCCCCCCCCCccccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEE
Confidence 999999998521 0 999
Q ss_pred eC---------CCCCC-CCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 383 NV---------PIPVP-LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 383 N~---------~~~~~-~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|. ++.+. ...+.||+++.++.+ .+.|++++++.|+|....
T Consensus 396 N~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 396 NTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGV 445 (488)
T ss_pred cCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecc
Confidence 94 33332 234458888877776 288999999999998655
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-61 Score=517.37 Aligned_cols=350 Identities=17% Similarity=0.167 Sum_probs=279.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhC--CChHhh----hHHHHHHHHH
Q psy10608 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENI------TEEQG--KTLADA----EGDVLRGLQV 134 (445)
Q Consensus 67 ~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a----~~ev~~~~~~ 134 (445)
+++++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 888776 4599999999
Q ss_pred HHHHccCcccccCcccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHH
Q psy10608 135 VEQCCSIPTIMQGETLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212 (445)
Q Consensus 135 l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~ 212 (445)
++||++.. ...++..+ ....+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.||.++..|+
T Consensus 374 ~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 99999884 33344333 0122334678999999999999999 99998 99999999999999999999999999999
Q ss_pred HHHHHcCCCCcc----eEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCH
Q psy10608 213 DMLTQAGCPPGV----VNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANR 288 (445)
Q Consensus 213 ~~l~~aGlP~gv----v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl 288 (445)
+++.++ +|+|+ +|+|+|+.++++.|..||+|++|+||||++. +.+.++.++||+++|||||||+||++|||+
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DADl 526 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSADM 526 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCCH
Confidence 999999 99996 9999986778899999999999999999965 444555678999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCcccccceEEEecc--cch-HHHHHHHHHHh----ccccCCC------------CCCCCCCCCC
Q psy10608 289 SNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVE-WLPELKKRAEA----LKVSAGN------------VPGTDLGPVI 349 (445)
Q Consensus 289 ~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~-f~~~l~~~~~~----l~vG~p~------------~~~~~~Gpli 349 (445)
|.|++.+++++|.| ||.|++.+|+ +||+ +|+ .+..+++.+.+ + .|... -.+-.+||++
T Consensus 527 d~A~~~i~~~~~~n-GQ~C~a~~Rl-lVh~~i~d~G~~~~~i~~a~~~Ga~l-~Gg~~~~g~l~~~~~~i~~eE~FgPv~ 603 (718)
T PLN02418 527 DMAKRIVVDAKTDY-PAACNAMETL-LVHKDLVQNGGLNDLLVALRSAGVTL-YGGPRASKLLNIPEAQSFHHEYSSLAC 603 (718)
T ss_pred HHHHHHHHHHhCCC-CCccccCcEE-EEeccccccccHHHHHHHHHHCCCEE-ECCccccCeeCCCCchhhhCCcCCeeE
Confidence 99999999999999 9999999999 7777 676 44444433321 3 23211 0112456655
Q ss_pred CHHHHHHHHHHHHHHHHcC----CEEEeCCcc----c-------eEEEeCCCCCCCCCCccCCCCCCcc--CCCCcchHH
Q psy10608 350 SPQAKERILSLIQSGVDEG----ATLLLDGRN----L-------KVGINVPIPVPLSMFSFTGSRGSFL--GENHFYGKQ 412 (445)
Q Consensus 350 ~~~~~~~v~~~i~~a~~~G----a~~~~GG~~----~-------~V~iN~~~~~~~~~~pfGG~k~SG~--G~~~~~g~~ 412 (445)
.-..++..++.|+.|-+.. +.|.+.-.. + .||||+++... +..||||+|+||+ ||++++|++
T Consensus 604 ~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~-~~~PfGG~k~SG~stGr~~~~G~~ 682 (718)
T PLN02418 604 TVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFS-DGARFGLGAEVGISTGRIHARGPV 682 (718)
T ss_pred EEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC-CCCCCCCcccccccCCcCCCCCHH
Confidence 5444444445555444321 222221110 0 09999876543 5679999999999 965456999
Q ss_pred HHHHhheeEEEEeec
Q psy10608 413 GFYFYTETKTVTQLW 427 (445)
Q Consensus 413 ~l~~~~~~k~v~~~~ 427 (445)
||++|++.|++++-.
T Consensus 683 gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 683 GVEGLLTTRWILRGN 697 (718)
T ss_pred HHHHHhcEEEEEECC
Confidence 999999999998643
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-61 Score=495.27 Aligned_cols=282 Identities=20% Similarity=0.255 Sum_probs=246.8
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccc
Q psy10608 66 PAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145 (445)
Q Consensus 66 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~ 145 (445)
.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. ++.++|+++...
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~-- 74 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTP-- 74 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcC--
Confidence 478999999999999999999999999999999999999999999999999999987764 344555544221
Q ss_pred cCcc-c-cc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHH----HH
Q psy10608 146 QGET-L-AG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDML----TQ 217 (445)
Q Consensus 146 ~~~~-~-~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l----~~ 217 (445)
+.. + +. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++ .+
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 75 -GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred -cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 111 1 10 112234578899999999999999999999999999999999999999999999999999887 47
Q ss_pred cCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHH
Q psy10608 218 AGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLV 296 (445)
Q Consensus 218 aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv 296 (445)
+|+|+|++|+|+| +.+.++.|++||+|++|+||||+++|+.|++. ++|+++|+|||||+||++|||+|.|++.++
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~ 229 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIV 229 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHH
Confidence 8999999999998 56788999999999999999999999999875 499999999999999999999999999999
Q ss_pred HHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc--CCEEE
Q psy10608 297 GAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDE--GATLL 372 (445)
Q Consensus 297 ~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~--Ga~~~ 372 (445)
+++|.|+||.|++++|+ +||+ +|+|+++|+++ . .+++++++.+++.++|+++.+. |++++
T Consensus 230 ~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~ 293 (429)
T cd07121 230 QGASFDNNLPCIAEKEV-IAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKW 293 (429)
T ss_pred hcccccCCCCCCccceE-EEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccc
Confidence 99999999999999999 7777 69999998886 1 1478999999999999999864 68888
Q ss_pred eCCc
Q psy10608 373 LDGR 376 (445)
Q Consensus 373 ~GG~ 376 (445)
+||.
T Consensus 294 ~gg~ 297 (429)
T cd07121 294 VGKD 297 (429)
T ss_pred cCcC
Confidence 8763
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-61 Score=473.35 Aligned_cols=376 Identities=28% Similarity=0.370 Sum_probs=335.7
Q ss_pred eeecCEeeeCCCCCeEEeecCCCC-ceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATN-EVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g-~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
..++|+.+. .++..+++||++. +++++|..++.+|+++|++.|.+|++.|+.+|+.+|+.+|+|++++|+.+..+|.
T Consensus 116 p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~ 193 (769)
T COG4230 116 PIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLM 193 (769)
T ss_pred cccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666653 3566899999985 8889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
.++++|.||++..+..||..++++|+||+..++...+. ..++|+|+|.+|+|||||+.++..+++.||
T Consensus 194 ~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL 261 (769)
T COG4230 194 GLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQIAAAL 261 (769)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchHHHHHhHHHHHH
Confidence 99999999999999999999999999999887643221 346799999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc---C
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAK---N 266 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~---~ 266 (445)
++||+|+.||+++||+.+..-.++++++|+|++++|+++|++ .++..|+.+++++.|.|||||++++.|.++.++ .
T Consensus 262 ~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~ 341 (769)
T COG4230 262 AAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGR 341 (769)
T ss_pred HcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999999999965 589999999999999999999999999998876 3
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
..|++.|.||-|++||+.+|--|+++.+++.|+|..+||+|++...+ ++++ .|..++.|+-.+..+++|+|..-.|+
T Consensus 342 ~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvL-clQ~DvAd~~l~mLKGAm~el~~G~p~~l~tD 420 (769)
T COG4230 342 PIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVL-CLQEDVADRILTMLKGAMAELRVGNPDRLTTD 420 (769)
T ss_pred CCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhh-hhhhhHHHHHHHHHHHHHHHhccCCccceecc
Confidence 56889999999999999999999999999999999999999999877 6666 59999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEe---C-----Cccc-----e--------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLL---D-----GRNL-----K-------------------------------- 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~---G-----G~~~-----~-------------------------------- 379 (445)
+||+|+..+.+.++++|+..+..|-++.. . |.-+ +
T Consensus 421 VGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~ 500 (769)
T COG4230 421 VGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYKRDELDEVIDQ 500 (769)
T ss_pred ccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEecHHHHHHHHHH
Confidence 99999999999999999998888743321 1 1100 0
Q ss_pred -------------------------------EEEeCCCCCC-CCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 -------------------------------VGINVPIPVP-LSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 -------------------------------V~iN~~~~~~-~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
+|||...... ....||||.+-||.|. +.+|+..|..|+..+..
T Consensus 501 INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGP-KAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 501 INATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGP-KAGGPLYLLRLVSERPW 575 (769)
T ss_pred HhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCC-CCCChHHHHHHHhcCCc
Confidence 9999754322 2346999999999997 68999999999987764
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=485.77 Aligned_cols=353 Identities=18% Similarity=0.190 Sum_probs=289.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChH----hhh--------HHHHHHHHH
Q psy10608 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLA----DAE--------GDVLRGLQV 134 (445)
Q Consensus 67 ~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~~ 134 (445)
+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|++++++|+||+.. ++. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999988877742 443 589999999
Q ss_pred HHHHccCcccccCcccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHH
Q psy10608 135 VEQCCSIPTIMQGETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212 (445)
Q Consensus 135 l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~ 212 (445)
++|++.+.+.. +...+.. ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++.+++
T Consensus 84 ~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~ 160 (417)
T PRK00197 84 LRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160 (417)
T ss_pred HHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence 99999876543 4433311 12335788999999999999986 4 788999999999999999999999999999998
Q ss_pred HHH----HHcCCCCcceEEEeC-Chh-hhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 213 DML----TQAGCPPGVVNVIHG-AHD-AVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 213 ~~l----~~aGlP~gvv~vv~g-~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+++ .++|+|+|+||+|+| +.+ .++.|..||++++|+||||+++|+.|++.+ ++|+++|||||||+||++||
T Consensus 161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dA 237 (417)
T PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESA 237 (417)
T ss_pred HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCC
Confidence 885 689999999999996 444 677888899999999999999999999865 59999999999999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc---cCCC----------C-----CCCCCC
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV---SAGN----------V-----PGTDLG 346 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v---G~p~----------~-----~~~~~G 346 (445)
|+|.|++.+++++|.|+| .|++++|+ +||+ +|+|+++|+++++++++ |++. . .+-.+|
T Consensus 238 dl~~Aa~~iv~~~~~n~G-~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FG 315 (417)
T PRK00197 238 DLDKALKIVLNAKTQRPS-VCNALETL-LVHEAIAEEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLD 315 (417)
T ss_pred CHHHHHHHHHHhccCCCc-ccccceEE-EEEHHHhHHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhC
Confidence 999999999999999999 99999999 7777 79999999999999876 3321 0 122368
Q ss_pred CCCCHHHHHHHHHHHHHHHHc--C--CEEEeCCcc----c-------eEEEeCCCCCCCCCCccCCCCCCccC--CCCcc
Q psy10608 347 PVISPQAKERILSLIQSGVDE--G--ATLLLDGRN----L-------KVGINVPIPVPLSMFSFTGSRGSFLG--ENHFY 409 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~--G--a~~~~GG~~----~-------~V~iN~~~~~~~~~~pfGG~k~SG~G--~~~~~ 409 (445)
|++.--.++..++.|+.+-+. | +-+...... + .||||+++... +..||||.|+||+| +.|++
T Consensus 316 PVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~-~~~p~G~~~~sG~g~~~~~~~ 394 (417)
T PRK00197 316 LILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFT-DGGEFGLGAEIGISTQKLHAR 394 (417)
T ss_pred ceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccC-CCCccccchhheeecCCCcCC
Confidence 876554445555555555443 2 223222111 0 19999876543 56899999999999 22358
Q ss_pred hHHHHHHhheeEEEEeecc
Q psy10608 410 GKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 410 g~~~l~~~~~~k~v~~~~~ 428 (445)
|++|+++||+.|++++...
T Consensus 395 g~~~l~~~~~~k~v~~~~~ 413 (417)
T PRK00197 395 GPMGLEELTTYKYIVLGDG 413 (417)
T ss_pred CccchHhhcEEEEEEECCC
Confidence 9999999999999987543
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-59 Score=481.29 Aligned_cols=298 Identities=19% Similarity=0.243 Sum_probs=268.2
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHH-HHHHHccCccccc
Q psy10608 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQ-VVEQCCSIPTIMQ 146 (445)
Q Consensus 69 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~-~l~~~a~~~~~~~ 146 (445)
++.|+++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++ .++|++.. ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999986 8888887 78888863 222
Q ss_pred CccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHH----HcCCCC
Q psy10608 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT----QAGCPP 222 (445)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~aGlP~ 222 (445)
+.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++. ++|+|+
T Consensus 79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 22211 223456789999999999999999999999999999999999999999999999999888864 789999
Q ss_pred cceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhc
Q psy10608 223 GVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFG 301 (445)
Q Consensus 223 gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~ 301 (445)
|++|+|+| +.+.+..|++||+|++|+||||+++++ .++++++|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 99999998 567889999999999999999999764 4566789999999999999999999999999999999999
Q ss_pred ccCCcccccceEEEecc--cchHHHHHHHHHHhc-------cccCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEE
Q psy10608 302 AAGQRCMALSTVIFVGE--AVEWLPELKKRAEAL-------KVSAG-NVPGTDLGPVISPQAKERILSLIQSGVDEGATL 371 (445)
Q Consensus 302 ~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l-------~vG~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~ 371 (445)
|+||.|++++|+ +||+ +|+|+++|+++...+ ++|++ .++++.+||+++..+.+++..+++.++.+|+++
T Consensus 233 ~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~v 311 (436)
T cd07122 233 DNGTICASEQSV-IVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKV 311 (436)
T ss_pred cCCCCCCCCCEE-EEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeE
Confidence 999999999999 7777 699999999999887 88988 467889999999999999999999999999999
Q ss_pred EeCC
Q psy10608 372 LLDG 375 (445)
Q Consensus 372 ~~GG 375 (445)
++||
T Consensus 312 l~~~ 315 (436)
T cd07122 312 LVAE 315 (436)
T ss_pred EEEe
Confidence 8776
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-60 Score=487.12 Aligned_cols=329 Identities=18% Similarity=0.202 Sum_probs=275.1
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCc
Q psy10608 63 KATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIP 142 (445)
Q Consensus 63 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~ 142 (445)
....+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.+ .+++++...
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~~------~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKIA------KNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHH------HHHHHHHHh
Confidence 35788999999999999999999999999999999999999999999999999999999887632 233333322
Q ss_pred ---ccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHH---
Q psy10608 143 ---TIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT--- 216 (445)
Q Consensus 143 ---~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~--- 216 (445)
.+..+.... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 106 ~~~~~~~~~~~~--~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l 183 (465)
T PRK15398 106 PGVEDLTTEALT--GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAI 183 (465)
T ss_pred ccccccccCccc--CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHH
Confidence 111111111 123346788899999999999999999999999999999999999999999999999999876
Q ss_pred -HcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHH
Q psy10608 217 -QAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQ 294 (445)
Q Consensus 217 -~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~ 294 (445)
++|+|+|++|+++| +.+.++.|++||+||+|+||||+++|+.|++ ..+|+++|+|||||+||++|||+|.|++.
T Consensus 184 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~ 259 (465)
T PRK15398 184 VAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARD 259 (465)
T ss_pred HHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHH
Confidence 68999999999998 5678899999999999999999999999998 35899999999999999999999999999
Q ss_pred HHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q psy10608 295 LVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372 (445)
Q Consensus 295 iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~ 372 (445)
+++++|.|+||.|++++|| +||+ +|+|+++|+++. +|++++++++++.++++++.+++++++
T Consensus 260 i~~g~~~n~GQ~C~A~~rv-lV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~ 323 (465)
T PRK15398 260 IVKGASFDNNLPCIAEKEV-IVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKW 323 (465)
T ss_pred HHHhcccCCCCcCCCCceE-EEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhh
Confidence 9999999999999999999 7777 699999999751 278899999999999885432233333
Q ss_pred eCCc-----------c----ce----------------------------------------------------------
Q psy10608 373 LDGR-----------N----LK---------------------------------------------------------- 379 (445)
Q Consensus 373 ~GG~-----------~----~~---------------------------------------------------------- 379 (445)
.||. . ..
T Consensus 324 ~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~ 403 (465)
T PRK15398 324 VGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLN 403 (465)
T ss_pred hCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHH
Confidence 3221 0 00
Q ss_pred ----------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ----------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ----------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||.++ . +.+||||+|.|.+ +.+|+.| ...|.+|++..+
T Consensus 404 ~~a~~l~~G~V~iN~~~-~--~~~p~gg~~~s~~---~~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 404 KMARAIQTSIFVKNGPS-Y--AGLGLGGEGFTTF---TIATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHHhCCceEEEECCCC-c--cccCcCCCCCcee---eecccCC-CCccchhhhhhh
Confidence 9999764 2 5789999999986 3458888 888888888754
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-59 Score=478.51 Aligned_cols=282 Identities=16% Similarity=0.155 Sum_probs=250.3
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHH--HHHHHccCccccc
Q psy10608 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ--VVEQCCSIPTIMQ 146 (445)
Q Consensus 69 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~--~l~~~a~~~~~~~ 146 (445)
+++|+++|++||+.|+.+|+.+|.++|+++++.|++|+++|++++++|+|||+.+++.++..++. .+++++... .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~~---~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDEK---T 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhccc---c
Confidence 47899999999999999999999999999999999999999999999999999999876665554 334444322 2
Q ss_pred CccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHH----HcCCCC
Q psy10608 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT----QAGCPP 222 (445)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~aGlP~ 222 (445)
+...+ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. ++|+|+
T Consensus 78 ~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLT-GDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred Cceec-CCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 22222 1123446889999999999999999999999999999999999999999999999988888875 779999
Q ss_pred cceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhc
Q psy10608 223 GVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFG 301 (445)
Q Consensus 223 gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~ 301 (445)
|+||+|+| +.+.++.|+.||+|++|+||||++ |.+.+++++||+++|+|||+|+||++|||+|.|++.+++++|.
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 99999998 567889999999999999999998 5667778899999999999999999999999999999999999
Q ss_pred ccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeC
Q psy10608 302 AAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLD 374 (445)
Q Consensus 302 ~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~G 374 (445)
|+||.|++.+|+ +||+ +|+|+++|++++ ||+++..+++++.++|+++.++||+++.|
T Consensus 233 ~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg 291 (439)
T cd07081 233 DNGVICASEQSV-IVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQ 291 (439)
T ss_pred CCCCCCCCCCEE-EEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCC
Confidence 999999999999 7776 699999999874 89999999999999999999999987644
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-58 Score=471.39 Aligned_cols=344 Identities=19% Similarity=0.205 Sum_probs=278.6
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChH----hh--------hHHHHHHHHHHHHH
Q psy10608 71 SAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLA----DA--------EGDVLRGLQVVEQC 138 (445)
Q Consensus 71 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a--------~~ev~~~~~~l~~~ 138 (445)
..+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.. ++ ..|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999777766643 33 25899999999999
Q ss_pred ccCcccccCcccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHH
Q psy10608 139 CSIPTIMQGETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT 216 (445)
Q Consensus 139 a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~ 216 (445)
+...+.. +...+.. ..+...+++++|+|||++|+|| +| .+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 82 a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPDPV-GEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCCCC-cccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 8765432 4333211 1233567899999999999996 45 7889999999999999999999999999999999886
Q ss_pred ----HcCCCCcceEEEeC-Ch-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHH
Q psy10608 217 ----QAGCPPGVVNVIHG-AH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSN 290 (445)
Q Consensus 217 ----~aGlP~gvv~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~ 290 (445)
++|+|+|++|+|+| +. ..++.|..||++|+|+||||+++|+.|++.+ ++|+++|||||||+||++|||+|.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 89999999999998 44 4678889999999999999999999999877 699999999999999999999999
Q ss_pred HHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc---cCCC---------CC------CCCCCCCCC
Q psy10608 291 TLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV---SAGN---------VP------GTDLGPVIS 350 (445)
Q Consensus 291 a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v---G~p~---------~~------~~~~Gpli~ 350 (445)
|++.+++++|.|+| .|++++|| +||+ +|+|+++|+++++++.. |++. ++ +-.+||++.
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv-~V~~si~d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~ 313 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETL-LVHRDIAEEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILA 313 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeE-EEeHHHHHHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeE
Confidence 99999999999999 99999999 7777 69999999999877531 2210 11 223688765
Q ss_pred HHHHHHHHHHHHHHHHc--CC-EEEeCCccc------------eEEEeCCCCCCCCCCccCCCCCCcc----CCCCcchH
Q psy10608 351 PQAKERILSLIQSGVDE--GA-TLLLDGRNL------------KVGINVPIPVPLSMFSFTGSRGSFL----GENHFYGK 411 (445)
Q Consensus 351 ~~~~~~v~~~i~~a~~~--Ga-~~~~GG~~~------------~V~iN~~~~~~~~~~pfGG~k~SG~----G~~~~~g~ 411 (445)
--.++.+.+.|+.+-+. |- --+++.... .|+||++.... +..||||.|+||+ | +++|+
T Consensus 314 v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~-~~~pfg~~~~sG~~~~~g--~~~g~ 390 (406)
T cd07079 314 VKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFT-DGGEFGLGAEIGISTQKL--HARGP 390 (406)
T ss_pred EEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCccc-CCCccccceeeeeecCCC--cCCCC
Confidence 44445555555555432 21 122222210 19999876543 5679999999998 7 67999
Q ss_pred HHHHHhheeEEEEe
Q psy10608 412 QGFYFYTETKTVTQ 425 (445)
Q Consensus 412 ~~l~~~~~~k~v~~ 425 (445)
+|+++||+.|+++.
T Consensus 391 ~~l~~~~~~k~i~~ 404 (406)
T cd07079 391 MGLEELTTYKYIVR 404 (406)
T ss_pred cChHHhcEEEEEEe
Confidence 99999999999874
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >KOG2453|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-59 Score=435.42 Aligned_cols=393 Identities=23% Similarity=0.380 Sum_probs=367.6
Q ss_pred eecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy10608 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAEN 112 (445)
Q Consensus 33 ~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 112 (445)
..+|+|- .++..++.++|++.++|+.|..++.+|.+.+++.|++|++.|.+.|...|.++.+++.|.|+...+.|.++
T Consensus 23 vy~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~l 100 (507)
T KOG2453|consen 23 VYHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKL 100 (507)
T ss_pred eeeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhh
Confidence 3467887 45678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhc
Q psy10608 113 ITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIAC 192 (445)
Q Consensus 113 ~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaa 192 (445)
+++|+||-..+..+||..-+++|+|..++.+.+.|..+|+..++......|.|+|+|++|+.+|||-...-|.-..++.+
T Consensus 101 vslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~ 180 (507)
T KOG2453|consen 101 VSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVC 180 (507)
T ss_pred hhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhh
Confidence 99999999999999999999999999999999999999988888888899999999999999999999999999999999
Q ss_pred CCEEEEeCCCCChHHHH----HHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCC
Q psy10608 193 GNTHVIKPSERDPGACM----MLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268 (445)
Q Consensus 193 GN~VVlKps~~~p~~~~----~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 268 (445)
||+|++||++.+|+++. ++++.|.+-.+|++......|+.+.+.++..+.+++.++||||+++|+.+......++.
T Consensus 181 gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfg 260 (507)
T KOG2453|consen 181 GNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFG 260 (507)
T ss_pred cceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhh
Confidence 99999999999998765 56667777789999999999999999999999999999999999999999999888889
Q ss_pred cEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCC
Q psy10608 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLG 346 (445)
Q Consensus 269 ~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~G 346 (445)
+..|||||+|+.||.+|||+..++...++++...+||+|+...|+ ++|+ ||+.+++|+...+++++|+|+|+++.+|
T Consensus 261 k~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl-~~hesvyd~vlerlkkayaq~~ignpld~ntl~g 339 (507)
T KOG2453|consen 261 KLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRL-IVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIG 339 (507)
T ss_pred hHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHH-HhhHHHHHHHHHHHHHHHHheecCCcCCCCceec
Confidence 999999999999999999999999999999999999999999999 7887 6999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-----------------------------------------------
Q psy10608 347 PVISPQAKERILSLIQSGVDEGATLLLDGRNLK----------------------------------------------- 379 (445)
Q Consensus 347 pli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~----------------------------------------------- 379 (445)
||.++++..+.+.-|++++++|.++++||+..+
T Consensus 340 plht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainnev 419 (507)
T KOG2453|consen 340 PLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEV 419 (507)
T ss_pred cccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheecccc
Confidence 999999999999999999999999999998432
Q ss_pred -----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecccc
Q psy10608 380 -----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRES 430 (445)
Q Consensus 380 -----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~ 430 (445)
|.+|.++......-.|||.|..|-| |+.|.++..+|++..+.++++.++
T Consensus 420 ~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tggg--resgsdswkqymrrstctinyske 497 (507)
T KOG2453|consen 420 DQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG--RESGSDSWKQYMRRSTCTINYSKE 497 (507)
T ss_pred ccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCC--cccCchHHHHHHhhceeeeecccc
Confidence 8888877655566789999999999 569999999999999999988643
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-57 Score=499.10 Aligned_cols=341 Identities=16% Similarity=0.182 Sum_probs=289.5
Q ss_pred EeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHH
Q psy10608 60 RVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQC 138 (445)
Q Consensus 60 ~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 138 (445)
....++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. ++..+.+.++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 3556899999999999999999999999999999999999999999999999999999999998875 555555666554
Q ss_pred ccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHH--
Q psy10608 139 CSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT-- 216 (445)
Q Consensus 139 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~-- 216 (445)
.. .+...+. .. .......+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 85 ~~-~~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 43 2222222 11 1223456788999999999999999999999999999999999999999999999999888874
Q ss_pred --HcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHH
Q psy10608 217 --QAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLN 293 (445)
Q Consensus 217 --~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~ 293 (445)
++|+|+|+||+|+| +.+.++.|+.|++||+|+||||++++ +.++++++|+++|+|||+|+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 68999999999998 67788999999999999999999965 455678899999999999999999999999999
Q ss_pred HHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEE
Q psy10608 294 QLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATL 371 (445)
Q Consensus 294 ~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~ 371 (445)
.+++++|.|+||.|++++|| +||+ +|+|+++|+++. +|++++++++++.++|+++++.|++.
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v-~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~ 301 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAV-IVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNA 301 (862)
T ss_pred HHHHhhhccCCCccCCCceE-EEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCc
Confidence 99999999999999999999 7777 699999988761 58999999999999999876655432
Q ss_pred -EeCCcc---------------------ce--------------------------------------------------
Q psy10608 372 -LLDGRN---------------------LK-------------------------------------------------- 379 (445)
Q Consensus 372 -~~GG~~---------------------~~-------------------------------------------------- 379 (445)
+.||.. ..
T Consensus 302 ~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~ 381 (862)
T PRK13805 302 DIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSHEKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTN 381 (862)
T ss_pred cccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchhcccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 233310 10
Q ss_pred ----------------EEEeCCCC---------CCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ----------------VGINVPIP---------VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ----------------V~iN~~~~---------~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||.++. ...+.+|||| +.||+| +++|+.|+++|++.|+|..+
T Consensus 382 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~--~~~g~~g~~~~~~~k~v~~~ 450 (862)
T PRK13805 382 DDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGN--SVSENVGAKHLLNIKTVAKR 450 (862)
T ss_pred CHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCC--cCCCCCCHHHhheeeeeeec
Confidence 99998651 1246799998 999999 56899999999999999854
|
|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-56 Score=452.67 Aligned_cols=347 Identities=30% Similarity=0.404 Sum_probs=297.1
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccC
Q psy10608 75 SAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA 154 (445)
Q Consensus 75 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~ 154 (445)
+|++|+++|+.++.++|.++|+++++.|.++.++|+++++.|+|||+.+++.|+..+++.++|++.......+.......
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 68899999999999999999999999999999999999999999999999999999999999998876655543333234
Q ss_pred CCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh-h
Q psy10608 155 KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH-D 233 (445)
Q Consensus 155 ~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~-~ 233 (445)
.+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..|+++|.++|+|+|++++++|+. +
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~ 161 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE 161 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence 456778999999999999999999999999999999999999999999999999999999999999999999999964 4
Q ss_pred hhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceE
Q psy10608 234 AVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV 313 (445)
Q Consensus 234 ~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rv 313 (445)
..+.|..|+++|.|.||||+++++.|.+.++++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|+++++|
T Consensus 162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v 241 (367)
T cd06534 162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241 (367)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC---EEEeCCccc----------
Q psy10608 314 IFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGA---TLLLDGRNL---------- 378 (445)
Q Consensus 314 i~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga---~~~~GG~~~---------- 378 (445)
+||+ +|+|+++|...+....-..+......+||++.-..++.+.+.++.+-+.+. --+++.+..
T Consensus 242 -~v~~~~~~~f~~~l~tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~ 320 (367)
T cd06534 242 -LVHESIYDEFVEKLVTVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLR 320 (367)
T ss_pred -EEcHHHHHHHHHhhceeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCC
Confidence 7777 588888888333322222333335578998776666666666666544332 223333211
Q ss_pred --eEEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 379 --KVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 379 --~V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
.|+||+++....+..||||.|+||+| +++|++++++||+.|+++
T Consensus 321 ~g~v~iN~~~~~~~~~~pfgg~~~sG~g--~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 321 AGTVYINDSSIGVGPEAPFGGVKNSGIG--REGGPYGLEEYTRTKTVV 366 (367)
T ss_pred cceEEECCCCCCCCCCCCCCCcccCccC--CCChHHHHHHhceEEEEe
Confidence 19999876543578999999999999 459999999999999975
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-56 Score=452.44 Aligned_cols=341 Identities=15% Similarity=0.128 Sum_probs=280.0
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-----------HHHHHHHHHHHHHccCc
Q psy10608 74 ASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-----------GDVLRGLQVVEQCCSIP 142 (445)
Q Consensus 74 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-----------~ev~~~~~~l~~~a~~~ 142 (445)
++|++||+.|+++|..+|.++|+++++.|++++++|+++++.|+|||+.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999965432 48999999999998765
Q ss_pred ccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHc---C
Q psy10608 143 TIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA---G 219 (445)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a---G 219 (445)
....+...+ . ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++..+++++.++ |
T Consensus 81 ~~~~~~~~~-~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 81 GHIQDVLLP-D--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred CcccceEec-C--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 544443323 1 3357889999999999999999999 9999999999999999999999999999999999887 9
Q ss_pred CCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHH
Q psy10608 220 CPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGA 298 (445)
Q Consensus 220 lP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~ 298 (445)
+|+++|++++| +.+.+..|+.||++|+|+||||+++++.+.+.+. ++|+++|+|||+|+||++|||++.|++.++++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 99999999997 5678899999999999999999999999998774 68999999999999999999999999999999
Q ss_pred hhcccCCcccccceEEEecc--cchHHHHHHHHHHh----cccc-C-----CC-----CCCCCCCCCCCHHHHHHHHHHH
Q psy10608 299 AFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEA----LKVS-A-----GN-----VPGTDLGPVISPQAKERILSLI 361 (445)
Q Consensus 299 ~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~----l~vG-~-----p~-----~~~~~~Gpli~~~~~~~v~~~i 361 (445)
+|.| ||.|++++|| +||+ +|+|+++|.++++. +..| . |. .....+||++.--.++...+.+
T Consensus 235 ~~~~-GQ~C~a~~~v-~V~~~i~d~~~~~l~~~~~~~G~~~~~g~~~~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~eai 312 (397)
T cd07077 235 KFFD-QNACASEQNL-YVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEALESMTPLECQFRVLDVISAV 312 (397)
T ss_pred hccC-CccCCCCeEE-EEehhhhHHHHHHHHHHHHhcCcCcCCCceeeEEeccCCCChhhhhhhCceeEEEEEcchHHHH
Confidence 9999 9999999999 7777 69999999998876 2222 1 11 0133578875543334444344
Q ss_pred HHHH----HcC---CEEEeCCccc------------eEEEeCCCCCC-CCCCccCCCC--CCccCCCCcch-HHHHHHhh
Q psy10608 362 QSGV----DEG---ATLLLDGRNL------------KVGINVPIPVP-LSMFSFTGSR--GSFLGENHFYG-KQGFYFYT 418 (445)
Q Consensus 362 ~~a~----~~G---a~~~~GG~~~------------~V~iN~~~~~~-~~~~pfGG~k--~SG~G~~~~~g-~~~l~~~~ 418 (445)
++|. +.+ +.-++..... .|+||.+.... ...+||||.| .||+| +++| .+|+++|+
T Consensus 313 ~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g--~~~g~~~~~~~~~ 390 (397)
T cd07077 313 ENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN--NIFGAGVGHDALR 390 (397)
T ss_pred HHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc--CCCCCCCChHHhc
Confidence 4432 232 1122221110 19999876542 2568999999 89999 6689 99999999
Q ss_pred eeEEEE
Q psy10608 419 ETKTVT 424 (445)
Q Consensus 419 ~~k~v~ 424 (445)
+.|+++
T Consensus 391 ~~k~v~ 396 (397)
T cd07077 391 PLKRLV 396 (397)
T ss_pred ceeEee
Confidence 999986
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-55 Score=473.32 Aligned_cols=345 Identities=15% Similarity=0.146 Sum_probs=273.9
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH----------------HHHHH
Q psy10608 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG----------------DVLRG 131 (445)
Q Consensus 68 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~----------------ev~~~ 131 (445)
+++..+++|++||+.|+.+|.++|.++|+++++.|++++++|+ .|+||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999996 588888887664 48889
Q ss_pred HHHHHHHccCcccccCccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHH
Q psy10608 132 LQVVEQCCSIPTIMQGETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209 (445)
Q Consensus 132 ~~~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~ 209 (445)
++.++++++..+ ..++..+. ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.
T Consensus 363 ~~~l~~~a~~~~-~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAMED-PIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcCCC-cccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 999999987433 33443321 112334578899999999999999 9998 689999999999999999999999999
Q ss_pred HHHHHHHHcCCCCc----ceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCC
Q psy10608 210 MLVDMLTQAGCPPG----VVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285 (445)
Q Consensus 210 ~l~~~l~~aGlP~g----vv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 285 (445)
.|++++.++ +|+| ++++|+|..+.++.|..|+++|+|+||||+++|+.|+++++ +|+++|||||||+||++|
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~d 515 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKS 515 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCC
Confidence 999999999 9987 68999865667788999999999999999999999998874 999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cch-HHHHHHHHHHh----ccccCC----------CC----CCCC
Q psy10608 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVE-WLPELKKRAEA----LKVSAG----------NV----PGTD 344 (445)
Q Consensus 286 aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~-f~~~l~~~~~~----l~vG~p----------~~----~~~~ 344 (445)
||++.|++.++.++|.+ ||.|+|++|| +||+ +|+ +++++.+.+.+ + .|.. .+ .+-.
T Consensus 516 ADl~~A~~~i~~~~~~~-GQ~C~a~~rv-lV~~~i~d~~~~~~~v~~~~~~Ga~l-~Gg~~~~~~~~~~~~~~~i~~eE~ 592 (715)
T TIGR01092 516 ASVDMAKRIVRDAKCDY-PAACNAMETL-LVHKDLLRNGLLDDLIDMLRTEGVTI-HGGPRFAAYLTFNISETKSFRTEY 592 (715)
T ss_pred CCHHHHHHHHHHHhCCC-CCccccCcEE-EEehhhccchhHHHHHHHHHHCCCEE-ECCcchhheeccCCCCchhhhccc
Confidence 99999987777777665 9999999999 7777 565 56666665532 2 2321 11 1224
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHc--C-CEEEeCCccc------------eEEEeCCCCCCCCCCccCCCCCCccCCC--C
Q psy10608 345 LGPVISPQAKERILSLIQSGVDE--G-ATLLLDGRNL------------KVGINVPIPVPLSMFSFTGSRGSFLGEN--H 407 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~--G-a~~~~GG~~~------------~V~iN~~~~~~~~~~pfGG~k~SG~G~~--~ 407 (445)
+||++.-..++.+.+.|+.+-+. | +--++.-... .||||+++.. .+..||||+|+||+|++ +
T Consensus 593 FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~-~~~~pfGG~k~SG~g~~~~~ 671 (715)
T TIGR01092 593 SSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRF-SDGFRFGLGAEVGISTSRIH 671 (715)
T ss_pred cCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCC-CCCCCCcCccccccccCCCC
Confidence 68876655555555555555443 2 1122222110 0999987654 35689999999999954 3
Q ss_pred cchHHHHHHhheeEEEEeec
Q psy10608 408 FYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 408 ~~g~~~l~~~~~~k~v~~~~ 427 (445)
++|++|+++||+.|++++-.
T Consensus 672 ~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 672 ARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred CCChhHHHHhceEEEEEECC
Confidence 58999999999999998644
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-55 Score=441.24 Aligned_cols=337 Identities=20% Similarity=0.235 Sum_probs=265.6
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHhCCCh------HhhhHHHHHHHHHHHHHccCcc
Q psy10608 76 AKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAEN------ITEEQGKTL------ADAEGDVLRGLQVVEQCCSIPT 143 (445)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~ev~~~~~~l~~~a~~~~ 143 (445)
|++||+.|+++|..+|.++|+++++.|++|+++|+++ +++|+|||. .+++.|+..+++.++||++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999999999999 999999994 3467799999999999998886
Q ss_pred cccCccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHH----HHH
Q psy10608 144 IMQGETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDM----LTQ 217 (445)
Q Consensus 144 ~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~----l~~ 217 (445)
.. |+.++. ..++...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..|+++ |.+
T Consensus 81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 54 554432 123456788999999999999997 6 77889999999999999999999999999999999 569
Q ss_pred cCCCCcceEEEeC-Ch-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHH
Q psy10608 218 AGCPPGVVNVIHG-AH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQL 295 (445)
Q Consensus 218 aGlP~gvv~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~i 295 (445)
+|+|+|+||+|+| +. ++++.|..||+|++|+||||+.+|+.+++.. .+|+++|+|||||+||++|||+|.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 9999999999997 54 4678899999999999999999999988753 48999999999999999999999999999
Q ss_pred HHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcccc--------------CCC--C------CCCCCCCCCCH
Q psy10608 296 VGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVS--------------AGN--V------PGTDLGPVISP 351 (445)
Q Consensus 296 v~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG--------------~p~--~------~~~~~Gpli~~ 351 (445)
++++|.+ ||.|++++|+ |||+ +|+|+++|.++++++++. .+. + ..-.+||++.-
T Consensus 235 v~~~~~~-GQ~C~a~~rv-~V~~~v~d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v 312 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETL-LVNKAIAREFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSV 312 (398)
T ss_pred HhhhcCC-CCcccccceE-EEeHHHHHHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEE
Confidence 9999965 9999999999 7777 699999999998875421 000 0 11224665433
Q ss_pred HHHHHHHHHHHHHHHcC----CEEEeCCcc--------c---eEEEeCCCCCCCCCCccCCCCCCcc--CCCCcchHHHH
Q psy10608 352 QAKERILSLIQSGVDEG----ATLLLDGRN--------L---KVGINVPIPVPLSMFSFTGSRGSFL--GENHFYGKQGF 414 (445)
Q Consensus 352 ~~~~~v~~~i~~a~~~G----a~~~~GG~~--------~---~V~iN~~~~~~~~~~pfGG~k~SG~--G~~~~~g~~~l 414 (445)
..++...+.|+.+-+.| +-+...-.. . .|+||+++... +..|||=-.+-|+ ++.+.+|+.++
T Consensus 313 ~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~-~~~pfG~~~~~~~~~~~~~~rg~~~~ 391 (398)
T TIGR00407 313 KIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFT-DGFRFGFGAEVGISTQKLHARGPMGL 391 (398)
T ss_pred EEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcC-CCcccccceeeEEecCCCcCCCCcCH
Confidence 22233333333332222 122221110 0 09999987654 5578873333233 45578999999
Q ss_pred HHhheeE
Q psy10608 415 YFYTETK 421 (445)
Q Consensus 415 ~~~~~~k 421 (445)
+.||+.|
T Consensus 392 ~~~~~~~ 398 (398)
T TIGR00407 392 EALTSYK 398 (398)
T ss_pred HHhcCCC
Confidence 9999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2455|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-55 Score=421.80 Aligned_cols=392 Identities=23% Similarity=0.279 Sum_probs=343.5
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHH-H
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIK-A 104 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~ 104 (445)
+.+.+..|+|+.+...+. ....+|.+ ...++.+..++..++++||++|.+|++.|..+|..+|.++++|.|++|. +
T Consensus 57 ~~evP~vIg~~~v~t~~~--q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistk 134 (561)
T KOG2455|consen 57 PLEVPLVIGDKEVYTNDE--QYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTK 134 (561)
T ss_pred ceeccEEECCeeeecCCc--ccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcch
Confidence 456789999999976543 56778887 4888999999999999999999999999999999999999999999999 7
Q ss_pred hHHHHHHHHHHHhCCChHhhhHH-HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecC-CeEEEECCCCcchhhh
Q psy10608 105 NMKQLAENITEEQGKTLADAEGD-VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPL-GVTAGITPFNFPAMIP 182 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~ 182 (445)
++-+|....+.-.||...+|..+ ..+.++++|+++..+..+......+...+..+..+++|+ |-|++|+||||.....
T Consensus 135 yr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~g 214 (561)
T KOG2455|consen 135 YRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGG 214 (561)
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeecc
Confidence 88889889999999999999765 778899999988877766554333234566778889999 9999999999998777
Q ss_pred HhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 183 LWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 183 ~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
-...+||| +||+|++|||..+.+++.++.++|+|||||+|++|+|+++ ...++.+..+|+...+.||||+.+-+.+.+
T Consensus 215 nLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk 293 (561)
T KOG2455|consen 215 NLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWK 293 (561)
T ss_pred ccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHH
Confidence 77778877 7999999999999999999999999999999999999995 567799999999999999999999999999
Q ss_pred HhhcC------CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEeccc--chHHHHHHHHHHhc
Q psy10608 262 RGAKN------GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA--VEWLPELKKRAEAL 333 (445)
Q Consensus 262 ~aa~~------~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~--~~f~~~l~~~~~~l 333 (445)
..+++ ..+++.|+||||.-+|+++||++.++...++++|.++||.|++++|+ +|+++ +.+.++|.+.-+++
T Consensus 294 ~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRm-Yvp~s~wp~i~e~l~~~~~q~ 372 (561)
T KOG2455|consen 294 KVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRM-YVPESLWPQIREELVEEHSQL 372 (561)
T ss_pred HHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhc-ccchhhcHHHHHHHHHHHhhc
Confidence 88765 56889999999999999999999999999999999999999999999 88874 88889999999999
Q ss_pred cccCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEeCCccce--------------------------------
Q psy10608 334 KVSAG-NVPGTDLGPVISPQAKERILSLIQSGVDE-GATLLLDGRNLK-------------------------------- 379 (445)
Q Consensus 334 ~vG~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~~~~GG~~~~-------------------------------- 379 (445)
++||| .|..+.+||+|+.+.+.++.++|+.|+.. -.++++||+..+
T Consensus 373 ~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsV 452 (561)
T KOG2455|consen 373 KIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSV 452 (561)
T ss_pred ccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEE
Confidence 99998 77789999999999999999999999863 478999998432
Q ss_pred ------------------------------------------------EEEeCCCC-CCCCCCccCCCCCCccCCCCcch
Q psy10608 380 ------------------------------------------------VGINVPIP-VPLSMFSFTGSRGSFLGENHFYG 410 (445)
Q Consensus 380 ------------------------------------------------V~iN~~~~-~~~~~~pfGG~k~SG~G~~~~~g 410 (445)
.|||+-+. ....+.||||.+.||... +.+|
T Consensus 453 yvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND-KaGg 531 (561)
T KOG2455|consen 453 YVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND-KAGG 531 (561)
T ss_pred EEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC-CCCC
Confidence 99997443 334678999999999986 6788
Q ss_pred HHHHHHhheeEEE
Q psy10608 411 KQGFYFYTETKTV 423 (445)
Q Consensus 411 ~~~l~~~~~~k~v 423 (445)
++-+-.|+...+|
T Consensus 532 p~~l~RwtSp~~i 544 (561)
T KOG2455|consen 532 PHYLLRWTSPLSI 544 (561)
T ss_pred ceEEEeecCcchh
Confidence 8776666666554
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=276.56 Aligned_cols=265 Identities=17% Similarity=0.173 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHH--Hcc
Q psy10608 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIK----ANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQ--CCS 140 (445)
Q Consensus 67 ~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~--~a~ 140 (445)
.+++..++..+...+....++.++..+.+.++.+.+. ..+.+..+.+..-+|.+....+..+......|+. ...
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~~ 84 (422)
T cd07080 5 PDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLER 84 (422)
T ss_pred HHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHHH
Confidence 3444444444444444555566666666655555553 2333444445555555544333333333222210 000
Q ss_pred C-cccc-cCccccccCC-CCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHH
Q psy10608 141 I-PTIM-QGETLAGVAK-DMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQ 217 (445)
Q Consensus 141 ~-~~~~-~~~~~~~~~~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~ 217 (445)
. ...+ ....+..+.+ +...++.++|+|||++|+|||||+ +.++.+++||++||++|+|||+.+|.++..|.++|.+
T Consensus 85 ~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~ 163 (422)
T cd07080 85 ILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLAD 163 (422)
T ss_pred HHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHh
Confidence 0 0001 0112222222 445678999999999999999999 7999999999999999999999999999999999999
Q ss_pred cCCCC----cceEEE--eCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCC-CeeEecCCC---
Q psy10608 218 AGCPP----GVVNVI--HGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAK-NHGVIMSDA--- 286 (445)
Q Consensus 218 aGlP~----gvv~vv--~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk-~~~iV~~da--- 286 (445)
+ +|+ +.++++ +|+ .+.++.|+.++ |.|+||||+++++.|.+.++.+ +.++|+||| +++|+.+++
T Consensus 164 ~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~ 238 (422)
T cd07080 164 V-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALES 238 (422)
T ss_pred c-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhcc
Confidence 9 787 889998 464 44788899887 9999999999999999998865 468999999 555555568
Q ss_pred -CHHHHHHHHHHHhhcccCCcccccceEEEeccc-----chHHHHHHHHHHhccccCC
Q psy10608 287 -NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA-----VEWLPELKKRAEALKVSAG 338 (445)
Q Consensus 287 -Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~-----~~f~~~l~~~~~~l~vG~p 338 (445)
|++.+++.+++++|.|+||.|+|+++| |||+. ++|.++|.++++++.-..|
T Consensus 239 ~dl~~aa~~~a~~~~~~~gQ~C~sp~~v-~V~~~~~~~~~~f~~~l~~~l~~~~~~~p 295 (422)
T cd07080 239 EKLAEVADALAEDICRYDQQACSSPQVV-FVEKDDDEELREFAEALAAALERLPRRYP 295 (422)
T ss_pred ccHHHHHHHHHHHHHHHhhhhccCCeEE-EEECCCCchHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999 77762 5999999999988765444
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=246.65 Aligned_cols=348 Identities=16% Similarity=0.191 Sum_probs=266.8
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh------CCChHhh------hHHHHHHHHH
Q psy10608 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQ------GKTLADA------EGDVLRGLQV 134 (445)
Q Consensus 67 ~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------Gk~~~~a------~~ev~~~~~~ 134 (445)
.++.+..+.|++|+..+..++..+|.+.|.++++.|+.+.++|.+++..|. |.+-... ...+..+++-
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 357788889999999999999999999999999999999999999887765 4332211 1356777888
Q ss_pred HHHHccCcccccCcccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHH
Q psy10608 135 VEQCCSIPTIMQGETLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212 (445)
Q Consensus 135 l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~ 212 (445)
++..+.+.+.+. +... ....+...+..+.|+||+++| |....+.++...+.||.+||+||+|.++.+..++..|+
T Consensus 83 l~~Va~L~DPvG-ev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~ 159 (417)
T COG0014 83 LRQVAALPDPVG-EVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV 159 (417)
T ss_pred HHHHhcCCCchH-hhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence 888888877653 2222 123567788899999999999 99999999999999999999999999999999998887
Q ss_pred HHH----HHcCCCCcceEEEeC-C-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCC
Q psy10608 213 DML----TQAGCPPGVVNVIHG-A-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDA 286 (445)
Q Consensus 213 ~~l----~~aGlP~gvv~vv~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~da 286 (445)
+++ .++|+|++.||+++. + ..+.+.|..+..||+|...||....+.|.+.+. .||+-..-|++.++|+.+|
T Consensus 160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~A 236 (417)
T COG0014 160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESA 236 (417)
T ss_pred HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccC
Confidence 776 567999999999987 3 455677778889999999999999999988774 7888888899999999999
Q ss_pred CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc---cCCCCCCCCCCCC-CCHHHHHHHHHH
Q psy10608 287 NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV---SAGNVPGTDLGPV-ISPQAKERILSL 360 (445)
Q Consensus 287 Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v---G~p~~~~~~~Gpl-i~~~~~~~v~~~ 360 (445)
|+|+|...+++++....+ .|++.+.+ +||+ .++|+.+|.+.+....+ ||+..- ..++-. ......|+-.+|
T Consensus 237 Dld~A~~ii~nAKtqrPs-~CNA~EtL-LVh~~ia~~fLp~l~~~l~~~gvelr~d~~~~-~~~~~~~~~A~e~Dw~tEy 313 (417)
T COG0014 237 DLDKALKIIVNAKTQRPS-VCNAAETL-LVHRAIAKSFLPKLANALQEAGVELRGDAEAL-ALLPDAVKPATEEDWDTEY 313 (417)
T ss_pred CHHHHHHHHHcccCCCCc-ccchHHHH-HcCHHHHHHhHHHHHHHHHhcCeEEEcCHHHH-HhccccCCCCchhhHHHHh
Confidence 999999999999999998 99999999 8888 59999999999876432 332100 011100 223334555555
Q ss_pred HHHHHHcCCEEEeCCc-----------cc----------------------eEEEeCCCCCC-CCCCccCCCCCCccCCC
Q psy10608 361 IQSGVDEGATLLLDGR-----------NL----------------------KVGINVPIPVP-LSMFSFTGSRGSFLGEN 406 (445)
Q Consensus 361 i~~a~~~Ga~~~~GG~-----------~~----------------------~V~iN~~~~~~-~~~~pfGG~k~SG~G~~ 406 (445)
++-.++ .+++.+=. .+ .||||.+++|. ..++.||..-.-...+-
T Consensus 314 Ld~ila--vkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKl 391 (417)
T COG0014 314 LDLILA--VKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKL 391 (417)
T ss_pred hhheeE--EEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcc
Confidence 543322 22322211 00 09999999984 33455655433333445
Q ss_pred CcchHHHHHHhheeEEEEe
Q psy10608 407 HFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 407 ~~~g~~~l~~~~~~k~v~~ 425 (445)
|.+||.||+++|..|+++.
T Consensus 392 HARGPmGLe~LTs~Kyiv~ 410 (417)
T COG0014 392 HARGPMGLEALTSYKYIVR 410 (417)
T ss_pred cCCCCCChhhhcceeEEEe
Confidence 7899999999999999984
|
|
| >KOG4165|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=198.44 Aligned_cols=348 Identities=18% Similarity=0.194 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH------HhCCChHhh-h-----HHHHHHHHHHH
Q psy10608 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITE------EQGKTLADA-E-----GDVLRGLQVVE 136 (445)
Q Consensus 69 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a-~-----~ev~~~~~~l~ 136 (445)
+++..+.|+++++.++.++.++|.++|.++++.|+.+..++.++... |.|.....- | ..+.....-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 45667889999999999999999999999999999988877765544 445322111 1 23444555555
Q ss_pred HHccCcccccCcccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHH
Q psy10608 137 QCCSIPTIMQGETLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDM 214 (445)
Q Consensus 137 ~~a~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~ 214 (445)
..+++.+. -|+.+. ....+...+....|+||.++| |....-.+..-.+.|++.||.+++|....+..+...|.++
T Consensus 82 ~ia~~edp-vGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAELEDP-VGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHhcccc-hhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 55553222 233322 234566778888999999999 8888888888889999999999999999999998888887
Q ss_pred HHHc----CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHH
Q psy10608 215 LTQA----GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSN 290 (445)
Q Consensus 215 l~~a----GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~ 290 (445)
..++ |.|.+.|++|+...++.+.|..+..||.|...||+...|.|..... +||..+-.|.+.++|++|||+++
T Consensus 159 v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~k 235 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLDK 235 (433)
T ss_pred HHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHHH
Confidence 7665 7799999999988888888888899999999999999999988664 89999999999999999999999
Q ss_pred HHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHh--------------ccccCCCC--CCCCCCCCC-C
Q psy10608 291 TLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEA--------------LKVSAGNV--PGTDLGPVI-S 350 (445)
Q Consensus 291 a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~--------------l~vG~p~~--~~~~~Gpli-~ 350 (445)
|.+.+.+++..+.- .|++.+.+ ++|+ ...|.+.|...+.. +++++|.+ -++.+|.+. .
T Consensus 236 A~riv~DaK~dYPA-aCNAmETL-LIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ 313 (433)
T KOG4165|consen 236 AKRIVRDAKCDYPA-ACNAMETL-LIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECT 313 (433)
T ss_pred HHHHHhcccCCCch-hhhhHHHH-hccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchhee
Confidence 99999999998876 99999999 7776 26677777666543 22332221 133444432 2
Q ss_pred HHHHHHHHHHHHHHHHcCC----EEEeCCccc-----------eEEEeCCCCCCCCCCccCCCCCCcc--CCCCcchHHH
Q psy10608 351 PQAKERILSLIQSGVDEGA----TLLLDGRNL-----------KVGINVPIPVPLSMFSFTGSRGSFL--GENHFYGKQG 413 (445)
Q Consensus 351 ~~~~~~v~~~i~~a~~~Ga----~~~~GG~~~-----------~V~iN~~~~~~~~~~pfGG~k~SG~--G~~~~~g~~~ 413 (445)
-+-.+.+.+.|+....-|. -+++-.... .||+|.+++|. .++.||=--+-|+ +|.|.+||.|
T Consensus 314 ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFa-DGfRfGlGaEVGIST~rIHARGPvG 392 (433)
T KOG4165|consen 314 IEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFA-DGFRFGLGAEVGISTSRIHARGPVG 392 (433)
T ss_pred eeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeeccccccc-ccccccccceeeeeccceeccCCcc
Confidence 2233445555554444332 122211100 19999999985 5566654334444 6767899999
Q ss_pred HHHhheeEEEEe
Q psy10608 414 FYFYTETKTVTQ 425 (445)
Q Consensus 414 l~~~~~~k~v~~ 425 (445)
++-++.+||++.
T Consensus 393 veGLlttkw~lR 404 (433)
T KOG4165|consen 393 VEGLLTTKWLLR 404 (433)
T ss_pred ccceeeeeeEEe
Confidence 999999999875
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.2e-13 Score=135.89 Aligned_cols=173 Identities=21% Similarity=0.253 Sum_probs=139.2
Q ss_pred CCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCC----cceEEE--e
Q psy10608 156 DMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPP----GVVNVI--H 229 (445)
Q Consensus 156 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~----gvv~vv--~ 229 (445)
....+..+.|.|++++|.|.|.|+. .++.++.+|++||..|+|.|+..+.++..|.+.|.+. .|. ..+.++ +
T Consensus 78 ~~~~~~~~~p~g~v~Hi~agNvp~~-~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~ 155 (399)
T PF05893_consen 78 RGDGYVRAFPRGLVFHIAAGNVPLV-GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWP 155 (399)
T ss_pred cccchhhccCCceEEEEcCCCccch-HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEec
Confidence 3346778999999999999999985 5566888999999999999999999999999999887 553 456666 3
Q ss_pred C-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCccc
Q psy10608 230 G-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCM 308 (445)
Q Consensus 230 g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~ 308 (445)
+ +.+..+.+.. ..|.++.+||.++.+.|.+... ..++.+....-.+.++|..+++++.+++.+....+...+|.|.
T Consensus 156 ~~d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~-~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCs 232 (399)
T PF05893_consen 156 GGDEELEEALSQ--QADAVVAWGGDETIRAIRQPLP-PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACS 232 (399)
T ss_pred CCchHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC-CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccC
Confidence 4 4555666764 4799999999999999999443 3344444445567788888889999999999999999999999
Q ss_pred ccceEEEecc-----cchHHHHHHHHHHhcc
Q psy10608 309 ALSTVIFVGE-----AVEWLPELKKRAEALK 334 (445)
Q Consensus 309 a~~rvi~V~~-----~~~f~~~l~~~~~~l~ 334 (445)
|++.| |++. .++|.++|.+.+.+..
T Consensus 233 Sp~~i-fv~~g~~~~~~~f~~~L~~~L~~~~ 262 (399)
T PF05893_consen 233 SPQVI-FVETGDGDSVEEFAERLAEALERAA 262 (399)
T ss_pred CCeEE-EEECCCcccHHHHHHHHHHHHHHHH
Confidence 99998 6662 2788889888877643
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-07 Score=108.13 Aligned_cols=109 Identities=16% Similarity=0.057 Sum_probs=85.7
Q ss_pred cccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEE
Q psy10608 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVI 228 (445)
Q Consensus 149 ~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv 228 (445)
.+| ...|+.+..+..|+|++++|+||| ..++.+++.||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1063 ~LP-GPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1063 ELP-GPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI 1129 (1208)
T ss_pred cCC-CCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc
Confidence 345 678899999999999999999999 567889999999999999999998652 11 23565555444
Q ss_pred eCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC---CcEEEeC
Q psy10608 229 HGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG---KRVQSNM 274 (445)
Q Consensus 229 ~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~---~~~~lEl 274 (445)
..+..+..+++++.|.|||++++.+.|.++.+++- .|++.|.
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 23446778889999999999999999999887652 3444444
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=67.98 Aligned_cols=107 Identities=14% Similarity=0.104 Sum_probs=78.4
Q ss_pred cccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEE
Q psy10608 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVI 228 (445)
Q Consensus 149 ~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv 228 (445)
.+| +..|+.+.....|+|+|+++.+-. ...+.+++.+|++||.+|+..++. .... + ++||+.+.+.+
T Consensus 1172 ~LP-GPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~----~--~~Lp~~v~~~v 1238 (1318)
T PRK11809 1172 LLP-GPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRAL----V--AALPAAVQARI 1238 (1318)
T ss_pred cCC-CCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHHH----H--HhccHHHHhHh
Confidence 345 678899999999999999998732 357889999999999998865443 1122 2 46898887766
Q ss_pred eCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEE
Q psy10608 229 HGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQ 271 (445)
Q Consensus 229 ~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~ 271 (445)
.-. .........++.|.|.|.....+.+.++.+++--+++
T Consensus 1239 ~~~---~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1239 QLA---KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred hhc---cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 321 1222234569999999999999999998887644443
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.045 Score=50.59 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=55.6
Q ss_pred CeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHH
Q psy10608 278 NHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKE 355 (445)
Q Consensus 278 ~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~ 355 (445)
.-+||++|.|++.|+..++.+.-..-| ..+.-.| +||| .|+|+++++.+++.+. +.. -+-..+.
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatV-lVqEsireefi~rvr~~m~pl~------~~v-----a~Hpny~ 71 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATV-LVQESIREEFIERVRSRMKPLS------PQV-----ANHPNYL 71 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEE-EEeHHHHHHHHHHHHHhCccCC------hhh-----ccCcHHH
Confidence 458999999999999999999754433 3455566 8888 4999999999987653 211 1222344
Q ss_pred HHHHHHHHHHHcCCEEEeCC
Q psy10608 356 RILSLIQSGVDEGATLLLDG 375 (445)
Q Consensus 356 ~v~~~i~~a~~~Ga~~~~GG 375 (445)
+-.+.++ .-+++++.++
T Consensus 72 rsl~~i~---~l~~~~I~~~ 88 (215)
T PF07368_consen 72 RSLKKIK---CLNAKTIVAD 88 (215)
T ss_pred HHHHHHH---hcCCeEEEec
Confidence 4444443 4678888774
|
The function of this family is unknown. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.76 E-value=12 Score=37.73 Aligned_cols=162 Identities=11% Similarity=0.081 Sum_probs=95.4
Q ss_pred CCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEE--eCCCCChHHHHHHHHHHHHcCCCCcceEEE-eCC
Q psy10608 155 KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVI--KPSERDPGACMMLVDMLTQAGCPPGVVNVI-HGA 231 (445)
Q Consensus 155 ~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVl--Kps~~~p~~~~~l~~~l~~aGlP~gvv~vv-~g~ 231 (445)
++.....++.|+-.|++..|.-|| .+.++.++||-.+|+.=|+ -|+.. .....|+ ..+.+|.- .+. -|+
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~--i~p~vL~-aa~~~Gv~----eIy~vGG 154 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRG--VTGELLA-VAKELGVK----GVLAIGG 154 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCC--CCHHHHH-HHHHcCCC----eeecccC
Confidence 455567789999999999995443 4466778999999986554 34321 2222333 34555553 222 255
Q ss_pred hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccc
Q psy10608 232 HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALS 311 (445)
Q Consensus 232 ~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~ 311 (445)
.....++...-++|+|+=.|..-+...=...... .-+=+--|-..-+||-+++|.+..+.+++..+=+... +
T Consensus 155 AQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~--V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~----a-- 226 (368)
T PRK13769 155 PHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY--VGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT----S-- 226 (368)
T ss_pred HHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCC--cCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC----C--
Confidence 4444566655589999999987653321111111 1111223444556777779999888888765543322 2
Q ss_pred eEEEecccchHHHHHHHHHHh
Q psy10608 312 TVIFVGEAVEWLPELKKRAEA 332 (445)
Q Consensus 312 rvi~V~~~~~f~~~l~~~~~~ 332 (445)
..+++-.+.++.+++.+.+.+
T Consensus 227 ~~iLvT~s~~la~~V~~~v~~ 247 (368)
T PRK13769 227 FAYLLSTDAELLKAAEEIYRR 247 (368)
T ss_pred cEEEEECCHHHHHHHHHHHHH
Confidence 223555556677776666654
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=90.48 E-value=23 Score=36.39 Aligned_cols=230 Identities=11% Similarity=0.060 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh-----------Hhh--------hHHHHHHHHHHHHHccCcccccCcc
Q psy10608 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTL-----------ADA--------EGDVLRGLQVVEQCCSIPTIMQGET 149 (445)
Q Consensus 89 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-----------~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~ 149 (445)
.+-.+..+.+.+.++++.|+-....++...+-. .++ +.-++.+.+.++.|...........
T Consensus 12 ~~v~~~V~~Il~dVr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~l~~~~~~Ai~~A~~~I~~fh~~q~~~~~~~ 91 (412)
T PF00815_consen 12 SEVEETVREILEDVRERGDKALLEYTKKFDGVELESLRVSEEEIAAAYAKLDPELREAIEQAAENIRAFHEAQLPKKDWE 91 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHTT-----EE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccccEecHHHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 334455555666666666665555555543221 011 1233444455554443322111111
Q ss_pred ccccCCCCceeEEEecCCeEEEECCC-Ccch-hhhHhHHHHHhhcCCEEE--EeCCCCChHHHHHHHHHHHHcCCCCcce
Q psy10608 150 LAGVAKDMDIHSYRVPLGVTAGITPF-NFPA-MIPLWMFPVAIACGNTHV--IKPSERDPGACMMLVDMLTQAGCPPGVV 225 (445)
Q Consensus 150 ~~~~~~~~~~~~~~~P~GVv~~I~p~-N~P~-~~~~~~i~~ALaaGN~VV--lKps~~~p~~~~~l~~~l~~aGlP~gvv 225 (445)
.. ..++.....++.|+-.|++..|. .+|+ .+.++.++||-.+|..=| .-|+...-...-.+.-....+|.-
T Consensus 92 ~~-~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~---- 166 (412)
T PF00815_consen 92 VE-TEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVD---- 166 (412)
T ss_dssp EE-EETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-S----
T ss_pred EE-ecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCC----
Confidence 11 23456667889999999999994 4555 335666889999997644 345443212222223334555653
Q ss_pred EEEe-CChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCe--eEecCCCCHHHHHHHHHHH
Q psy10608 226 NVIH-GAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNH--GVIMSDANRSNTLNQLVGA 298 (445)
Q Consensus 226 ~vv~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~--~iV~~daDl~~a~~~iv~~ 298 (445)
.+.. |+.....+|. .-|+||+|+=.|..-+...=..-... ..+=+ +-|.+= +|-+++||.+..+.+++..
T Consensus 167 evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~--V~ID~-~AGPSEv~ViAD~~A~p~~vAaDLLaQ 243 (412)
T PF00815_consen 167 EVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGD--VGIDM-IAGPSEVLVIADETANPEFVAADLLAQ 243 (412)
T ss_dssp EEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS---EES-------EEEEEE-TTS-HHHHHHHHHHH
T ss_pred EEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCC--cccCC-CCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 2332 4444444554 34889999999987553321111111 11111 123333 3344578999999888876
Q ss_pred hhcccCCcccccceEEEecccchHHHHHHHHHHh
Q psy10608 299 AFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEA 332 (445)
Q Consensus 299 ~f~~~GQ~C~a~~rvi~V~~~~~f~~~l~~~~~~ 332 (445)
+=+...- ..+++-.++++.+++.+.+.+
T Consensus 244 AEHd~~a------~~vLvt~s~~la~~V~~~v~~ 271 (412)
T PF00815_consen 244 AEHDPDA------QAVLVTTSEELAEAVEAEVER 271 (412)
T ss_dssp HTT-TT-------EEEEEES-HHHHHHHHHHHHH
T ss_pred hccCCCC------ceEEEECCHHHHHHHHHHHHH
Confidence 6554431 223555556666666665544
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=90.10 E-value=24 Score=36.01 Aligned_cols=163 Identities=14% Similarity=0.113 Sum_probs=89.1
Q ss_pred CCCceeEEEecCCeEEEECCCC-cchh-hhHhHHHHHhhcCCEEE--EeCCCCC-hHHHHHHHHHHHHcCCCCcceEEE-
Q psy10608 155 KDMDIHSYRVPLGVTAGITPFN-FPAM-IPLWMFPVAIACGNTHV--IKPSERD-PGACMMLVDMLTQAGCPPGVVNVI- 228 (445)
Q Consensus 155 ~~~~~~~~~~P~GVv~~I~p~N-~P~~-~~~~~i~~ALaaGN~VV--lKps~~~-p~~~~~l~~~l~~aGlP~gvv~vv- 228 (445)
++.....++.|+-.|++..|.- +|+. +.++.++||-.+|+.=| .-|+... ......|+ ....+|.- .+.
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-aa~~~Gv~----eiy~ 156 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILA-AAKLAGVD----EIYK 156 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHH-HHHHcCCc----EEec
Confidence 4566778899999999999964 5553 35666889999998654 3454321 11112222 23445542 232
Q ss_pred eCChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCe-e-EecCCCCHHHHHHHHHHHhhcc
Q psy10608 229 HGAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNH-G-VIMSDANRSNTLNQLVGAAFGA 302 (445)
Q Consensus 229 ~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~-~-iV~~daDl~~a~~~iv~~~f~~ 302 (445)
-|+.....+|. +-|.||+|+=.|..-+...=.. .... .-+=+- -|.+= + |.+++||.+..+.+++.-+=+.
T Consensus 157 vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~-v~g~-V~ID~~-AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~ 233 (390)
T cd06572 157 VGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRL-VSGD-VGIDMP-AGPSEVLVIADETANPEFVAADLLSQAEHD 233 (390)
T ss_pred cCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHH-hcCC-cCccCC-CCCceEEEEeCCCCCHHHHHHHHHhhhccC
Confidence 24555445554 4788999998887755332111 1111 111111 23333 3 3344589999988887655433
Q ss_pred cCCcccccceEEEecccchHHHHHHHHHH
Q psy10608 303 AGQRCMALSTVIFVGEAVEWLPELKKRAE 331 (445)
Q Consensus 303 ~GQ~C~a~~rvi~V~~~~~f~~~l~~~~~ 331 (445)
.. +. -+ ++-.+.++.+++.+.+.
T Consensus 234 ~~----a~-ai-LvT~s~~la~~V~~~v~ 256 (390)
T cd06572 234 PD----SQ-AI-LVTTSEELAEAVEEEVE 256 (390)
T ss_pred CC----Ce-EE-EEECCHHHHHHHHHHHH
Confidence 21 22 23 55445555555554443
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.04 E-value=11 Score=39.91 Aligned_cols=107 Identities=20% Similarity=0.174 Sum_probs=73.9
Q ss_pred cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh
Q psy10608 153 VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH 232 (445)
Q Consensus 153 ~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~ 232 (445)
...++.+.....|.|-|+++.+ +....+.+++.+|++||.+++-+.+. ++.++. .+|.++-..+.-..
T Consensus 631 GptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~-------~aa~~~--~l~~~v~~~~~~~~ 698 (769)
T COG4230 631 GPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSG-------LAALLK--DLPSAVASRIQVAK 698 (769)
T ss_pred CCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcch-------HHHHHH--hchhhhhhheeecc
Confidence 5677889999999999999855 56678888999999999999876553 222222 25655422222111
Q ss_pred hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCC
Q psy10608 233 DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMG 275 (445)
Q Consensus 233 ~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElG 275 (445)
.. ...-..+.+.|.|...-.+.+.+..+.+-.+++.-.+
T Consensus 699 ---~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 699 ---DW-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred ---ch-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 12 3334578999999999999999877766556655444
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=83.98 E-value=53 Score=33.52 Aligned_cols=162 Identities=16% Similarity=0.085 Sum_probs=90.5
Q ss_pred CCCceeEEEecCCeEEEECCC-Ccch-hhhHhHHHHHhhcCCEEE--EeCCCC-ChHHHHHHHHHHHHcCCCCcceEEE-
Q psy10608 155 KDMDIHSYRVPLGVTAGITPF-NFPA-MIPLWMFPVAIACGNTHV--IKPSER-DPGACMMLVDMLTQAGCPPGVVNVI- 228 (445)
Q Consensus 155 ~~~~~~~~~~P~GVv~~I~p~-N~P~-~~~~~~i~~ALaaGN~VV--lKps~~-~p~~~~~l~~~l~~aGlP~gvv~vv- 228 (445)
++.....++.|+..|++..|. .+|+ .+.++.++||-.+|+.=| .-|+.. .......|+ ..+.+|.- .+.
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~----eIy~ 152 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVD----EVYK 152 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCC----eehh
Confidence 455667889999999999997 4444 345666889999998654 344422 112222333 33556653 222
Q ss_pred eCChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEe-CCCCCee--EecCCCCHHHHHHHHHHHhhc
Q psy10608 229 HGAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN-MGAKNHG--VIMSDANRSNTLNQLVGAAFG 301 (445)
Q Consensus 229 ~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lE-lGGk~~~--iV~~daDl~~a~~~iv~~~f~ 301 (445)
-|+.....+|. +-|+||+|+=.|..-+...=..-.. .|-.. +-|.+=+ |-+++||.+..+.+++.-+=+
T Consensus 153 vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 228 (393)
T TIGR00069 153 VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG----DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEH 228 (393)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 24554445553 4578999998888755332111111 12111 1233333 334468999999888866544
Q ss_pred ccCCcccccceEEEecccchHHHHHHHHHH
Q psy10608 302 AAGQRCMALSTVIFVGEAVEWLPELKKRAE 331 (445)
Q Consensus 302 ~~GQ~C~a~~rvi~V~~~~~f~~~l~~~~~ 331 (445)
... + +-+ ++-.+.++.+++.+.+.
T Consensus 229 d~~----a-~~i-LvT~s~~la~~V~~~v~ 252 (393)
T TIGR00069 229 DPD----A-QAI-LVTTSEELAEAVQEEIE 252 (393)
T ss_pred CCC----C-cEE-EEECCHHHHHHHHHHHH
Confidence 332 2 223 55445555555555443
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=83.13 E-value=60 Score=33.51 Aligned_cols=162 Identities=15% Similarity=0.142 Sum_probs=90.6
Q ss_pred CCCceeEEEecCCeEEEECCC-Ccch-hhhHhHHHHHhhcCCEEE--EeCCCCChHHHHHHHHHHHHcCCCCcceEEE-e
Q psy10608 155 KDMDIHSYRVPLGVTAGITPF-NFPA-MIPLWMFPVAIACGNTHV--IKPSERDPGACMMLVDMLTQAGCPPGVVNVI-H 229 (445)
Q Consensus 155 ~~~~~~~~~~P~GVv~~I~p~-N~P~-~~~~~~i~~ALaaGN~VV--lKps~~~p~~~~~l~~~l~~aGlP~gvv~vv-~ 229 (445)
++.....++.|+..|++..|. .+|+ .+.++.++||-.+|+.=| .-|+.........|+ ..+.+|.- .+. -
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~----eIy~v 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGAD----EIYVL 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCC----eehhc
Confidence 455566789999999999995 4555 335667899999998654 344432112223333 33555543 222 2
Q ss_pred CChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEe-CCCCCe-eEe-cCCCCHHHHHHHHHHHhhcc
Q psy10608 230 GAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN-MGAKNH-GVI-MSDANRSNTLNQLVGAAFGA 302 (445)
Q Consensus 230 g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lE-lGGk~~-~iV-~~daDl~~a~~~iv~~~f~~ 302 (445)
|+.....+|. +-|.||+|+=.|..-+...=..-.+ .|-.. +-|.+= +|| +++||.+..+.+++.-+=+.
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 4544445553 4578999999888765332111111 12111 123333 333 34589999988887665443
Q ss_pred cCCcccccceEEEecccchHHHHHHHHHH
Q psy10608 303 AGQRCMALSTVIFVGEAVEWLPELKKRAE 331 (445)
Q Consensus 303 ~GQ~C~a~~rvi~V~~~~~f~~~l~~~~~ 331 (445)
.. +. -+ ++-.++++.+++.+.+.
T Consensus 256 ~~----a~-~i-LvT~s~~la~~V~~~v~ 278 (426)
T PRK12447 256 PN----SP-AV-LITTSRKLAEEVLAEIE 278 (426)
T ss_pred CC----Cc-eE-EEECCHHHHHHHHHHHH
Confidence 32 22 23 55445555555555543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 445 | ||||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-93 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-05 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-75 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 8e-07 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 1e-44 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-43 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-42 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-42 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-42 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 8e-42 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-41 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-41 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-40 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-40 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 4e-40 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 2e-39 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 2e-39 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 2e-39 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 4e-39 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-38 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 3e-36 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 3e-36 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 4e-36 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 1e-35 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-35 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-35 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 2e-35 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-35 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-35 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 3e-35 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 5e-35 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 6e-35 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-35 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-34 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-34 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 3e-34 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 3e-34 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-34 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 5e-34 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 9e-34 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-33 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 2e-33 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 2e-33 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 3e-33 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 8e-33 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-32 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 2e-32 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 2e-32 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 2e-32 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 2e-32 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-32 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-32 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 4e-32 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 5e-32 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 6e-32 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 6e-32 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 6e-32 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 2e-31 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 3e-31 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 5e-31 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 2e-30 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 3e-30 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 7e-30 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-29 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-27 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 8e-27 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-26 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 5e-26 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 5e-26 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 6e-26 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-25 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 2e-25 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 4e-25 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-24 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 5e-24 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-23 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 4e-22 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 8e-19 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-18 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-17 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 3e-13 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-12 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 4e-11 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 9e-11 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-10 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-09 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 4e-07 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-06 |
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 623 bits (1610), Expect = 0.0
Identities = 154/356 (43%), Positives = 226/356 (63%), Gaps = 2/356 (0%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
+ +IDGK V + ++ NPAT EV V A+ A++ +AV SAK A W+ T
Sbjct: 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAAT 83
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
+ R +V + ++ NM +LAE ++ E GKT+ DA+GD++RGL+V E IP + +
Sbjct: 84 NPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQK 143
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
E G +D++S R P+G+ AGITPFNFP MIP+WMF AIACGN ++KPSERDP
Sbjct: 144 SEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPS 203
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
+ L +++ +AG P G++NV++G AV+ I HPDI A+SFVGS +Y+Y A N
Sbjct: 204 VPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMN 263
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLP 324
GKR Q GAKNH +IM DA+ N L+GA +G+AG+RCMA+S + VGE +
Sbjct: 264 GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLID 323
Query: 325 ELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+L E+L++ D+GPV++ +A++RI SLI SG+++GA L++DGR+ K+
Sbjct: 324 KLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKL 379
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHSKAAV 439
VG+NVPIPVPL+ SF G + S G+ + +G F+T TKT+T W A
Sbjct: 458 VGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWPSG--IKDGAEF 515
Query: 440 SMPVMQ 445
S+P M+
Sbjct: 516 SIPTMR 521
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 616 bits (1590), Expect = 0.0
Identities = 163/355 (45%), Positives = 241/355 (67%), Gaps = 1/355 (0%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
I K YI+G++VESK + D+ NPAT EV+ +VP +T +++ A +A +A++TWSK
Sbjct: 3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKV 62
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
++ R ++LF Q ++ + ++LA IT E GK +A G+V RG++ VE P++M
Sbjct: 63 AVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMM 122
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
G++LA +A D++ +YR P+GV GI PFNFP M+P WMFP+AIA GNT ++KPSER P
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
LV++ +AG P GV NV++GAHD VN I +HP+I+AISFVGS G+Y+Y++G++N
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSEN 242
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE-AVEWLPE 325
KRVQS GAKNH ++++DAN +T+ +VGAAFG+AG+RCMA + V A E++ +
Sbjct: 243 LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAK 302
Query: 326 LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
L+++ +K+ G G LGPVI K+R LS I+ G++EGA L+ DGR
Sbjct: 303 LQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVS 357
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDV 432
+GIN+ +P P++ F F+G + SF G H GK FYT K VT + D
Sbjct: 433 LGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAPDF 485
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 307 bits (788), Expect = e-100
Identities = 91/356 (25%), Positives = 164/356 (46%), Gaps = 7/356 (1%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
I TK I G++VE + NP + V+ +A+ A++++A +AKKA W+ T
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAAT 69
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
R +++R +++ + +++ E + +E G T + A ++ + ++ S P +
Sbjct: 70 PAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVH 129
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
G + YRV GV I+P+NFP + + A+A GN VIKP+ P
Sbjct: 130 GRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPV 189
Query: 207 -ACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER-- 262
++ + +AG P GV++ + G + + H + ISF GS G+ + E
Sbjct: 190 TGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAI 249
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
K V +G V+++DA+ AF GQ CM+++ + V AV
Sbjct: 250 NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINR-VIVDAAVHD 308
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E+L + + + + + GT +GPVI+ + I+ EGAT+ ++G
Sbjct: 309 EFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP 364
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 301 bits (773), Expect = 2e-97
Identities = 104/357 (29%), Positives = 163/357 (45%), Gaps = 14/357 (3%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTS 87
L I+G+ V ++ I NPA +++V V KA E A+ SA +A++TW +
Sbjct: 37 EYPLIINGERVTTEDK--IQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVN 94
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG 147
R +L + II+ + + + E GK +A+ D + +E +
Sbjct: 95 PEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNR 154
Query: 148 ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207
+ P+GVT I+P+NF I + I GNT V+KP+ P
Sbjct: 155 GKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVV 214
Query: 208 CMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER---- 262
V++L AG P GV+N + G + +++ DHP I+F GS G +YER
Sbjct: 215 AAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVV 274
Query: 263 --GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV 320
G + KRV MG K+ V+ DA+ ++ +AFG +GQ+C A S + + V
Sbjct: 275 RPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGS-RAVIHKDV 333
Query: 321 --EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E L + A+ L V +GPVI +A E+I+S I+ G EG L+ G
Sbjct: 334 YDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGG 389
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 296 bits (761), Expect = 7e-96
Identities = 109/376 (28%), Positives = 176/376 (46%), Gaps = 17/376 (4%)
Query: 8 PSLQRTPSHMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATP 66
+ + ++ R+ LYI G++V++K + NP+ +EVV KA
Sbjct: 18 EARRAMREALRRVREEFGR--HYPLYIGGEWVDTKER--MVSLNPSAPSEVVGTTAKAGK 73
Query: 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG 126
AE E+A+ +A KA++TW R ++L + +++ ++L + E GK +A
Sbjct: 74 AEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASA 133
Query: 127 DVLRGLQVVEQCCSIPTIMQGETLAGV-AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185
DV + +E + + V D S+ VPLG I P+NFP I M
Sbjct: 134 DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193
Query: 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDI 244
+A GNT + KP+E + ++ +AG PPGVVN + G + ++ +HP I
Sbjct: 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 245 RAISFVGSDQAGKYIYERGAK------NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGA 298
R I+F GS + G IYE + KR G KN ++ A+ +V +
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVS 313
Query: 299 AFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKER 356
A+G GQ+C A S + + + L + KRAE L V DLGPV+S + + +
Sbjct: 314 AYGFQGQKCSAAS-RLILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERK 371
Query: 357 ILSLIQSGVDEGATLL 372
+LS I+ G +EG +L
Sbjct: 372 VLSYIEIGKNEGQLVL 387
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 294 bits (755), Expect = 3e-95
Identities = 93/358 (25%), Positives = 160/358 (44%), Gaps = 10/358 (2%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
+ YI G+++ + + ++ +P VV A ++++AV +A++A+ W++ +
Sbjct: 6 STHYIAGQWLAGQG-ETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLE 64
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R ++L R +K+ +LA I EE GK L ++ +V + V GE
Sbjct: 65 QRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEK 124
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW-MFPVAIACGNTHVIKPSERDPGAC 208
+A D P GV A P+NFP +P + P A+ GN V KPSE P
Sbjct: 125 SGPLA-DATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP-ALLAGNCVVFKPSELTPKVA 182
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA-KNG 267
+ + QAG P GV+N++ G + + H + + F GS + G ++ + +
Sbjct: 183 ELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV---EWLP 324
K + MG N V+ A+ + ++ +AF +AGQRC + + V + L
Sbjct: 243 KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTC-ARRLLVPQGAWGDALLA 301
Query: 325 ELKKRAEALKVSAGNV-PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
L + L+V + P +G VIS A E +L + + +GA LL G
Sbjct: 302 RLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDG 359
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 289 bits (742), Expect = 4e-93
Identities = 99/357 (27%), Positives = 170/357 (47%), Gaps = 14/357 (3%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSI 88
+ +G++VES+ + I + PA+ + +P + E+ A+ AK A + W I
Sbjct: 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPI 70
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGE 148
R +L+ ++++ + + E I E K A G+V R ++ + GE
Sbjct: 71 HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGE 130
Query: 149 TL-----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW-MFPVAIACGNTHVIKPSE 202
TL G + R PLGV I+PFN+P + + P A+ GNT V KP+
Sbjct: 131 TLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAP-ALVTGNTVVFKPAT 189
Query: 203 RDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261
+ + + +V+ L AG P G++ V+ G + + +HP I I+F G G+ I E
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249
Query: 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
+ V +G K+ +++ DA+ T +Q+V AF +GQRC A+ +FV ++V
Sbjct: 250 KAKM--IPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIK-RVFVQDSVA 306
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ + +K+ E L V + D+ PVI ++ I LI ++ GATLL +
Sbjct: 307 DQLVANIKELVEQLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK 362
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 287 bits (738), Expect = 8e-93
Identities = 107/350 (30%), Positives = 175/350 (50%), Gaps = 10/350 (2%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
TK YI+G++VES + + I++ NPAT EV+ +V K A+++ AV +A Y + TS+
Sbjct: 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVK 67
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGE 148
RQ +L ++ + + + IT+E G L+ +E GL + E
Sbjct: 68 ERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFE 127
Query: 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
G D + +GV+ ITP+NFP A A G+ V+KPSE P A
Sbjct: 128 ERRG-----DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAA 182
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267
++L ++ + G P GV N+++G V N + +HP +R +SF GS G I E+ AK+
Sbjct: 183 VILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDF 242
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPE 325
K+V +G K+ +++ D + G GQ C A T + V + +L E
Sbjct: 243 KKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAG-TRVLVPNKIKDAFLAE 301
Query: 326 LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
LK++ ++V GT +GP+IS + +++ + I G++EGA L G
Sbjct: 302 LKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGG 351
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 287 bits (737), Expect = 1e-92
Identities = 92/357 (25%), Positives = 173/357 (48%), Gaps = 16/357 (4%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSI 88
K Y++G++ S+ I ++ PA+ + VP + E++ ASAKKA W S
Sbjct: 4 QYKNYVNGEWKLSENE--IKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSY 61
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGE 148
I R L ++ +I+ + +++ +++E K A +V+R +++ M+GE
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 121
Query: 149 TL-----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW-MFPVAIACGNTHVIKPSE 202
L +K R P+G+ I+PFN+P + + P A+ GN KP
Sbjct: 122 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAP-ALIAGNVIAFKPPT 180
Query: 203 RDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYE 261
+ + ++L + +AG P GV N I G + ++I +H + I+F GS G+ I +
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 240
Query: 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
+ + +G K+ +++ DA+ T ++ AFG +GQRC A+ + V E+V
Sbjct: 241 MAGM--RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVK-RVLVMESVA 297
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E + +++++ AL + D+ P+I ++ + + LI D+GAT L + +
Sbjct: 298 DELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK 353
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 282 bits (723), Expect = 2e-90
Identities = 109/355 (30%), Positives = 173/355 (48%), Gaps = 9/355 (2%)
Query: 27 IATTKLYIDGKFVESKATDWID-LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSK 85
+ Y G+ ++SK + + PAT V+ ++ E++ AV SA+ AY WSK
Sbjct: 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSK 76
Query: 86 TSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
+ I R +V+ II+ +A+ GKT+ +AE D+ Q +E + +
Sbjct: 77 MAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTL 136
Query: 146 QGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
G+ + +Y R PLGV AGI +N+P MI W A+ACGN V KPS
Sbjct: 137 SGQH---IQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPM 193
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263
P ++L ++ +AG P G+VNV+ G + + +C HP++ +SF GS GK + E
Sbjct: 194 TPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
AK K V +G K+ +I D N + + A F GQ C T +FV + +
Sbjct: 254 AKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTN-GTRVFVQREIMPQ 312
Query: 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+L E+ KR +A+ V + T +G +IS +++L + EGA +L G
Sbjct: 313 FLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGE 367
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 281 bits (721), Expect = 4e-90
Identities = 105/360 (29%), Positives = 175/360 (48%), Gaps = 11/360 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
K YI+G + + + + +P+T E + + + + A+ +AKKA++TW TS
Sbjct: 26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPH 85
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGE 148
R + ++ I + +A+ I+ E G + A G + +
Sbjct: 86 ERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQ 145
Query: 149 TLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
+ + + +GV ITP+N+P A+ G T V+KPSE P
Sbjct: 146 EALI---EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPL 202
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAK 265
+ M+ ++L +A P GV N+I+G V +++ HPD+ ISF GS +AGK I + +
Sbjct: 203 SAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN 262
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWL 323
KRV +G K +I +DA+ + L + V F +GQ C A T + V +A+ + +
Sbjct: 263 TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAP-TRMLVEQAIYDKAI 320
Query: 324 PELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGIN 383
K AE +V G+ G +GPV+S + ++I LIQSG+DEGATL+ G L +G+
Sbjct: 321 KTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGME 380
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 280 bits (720), Expect = 5e-90
Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 11/353 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTS 87
KL+I GK+ + +D I++ PAT E V +VP A A++++AVA+A+ A++ W T
Sbjct: 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTP 68
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQ 146
R V+ ++ + + E G+ E + + + +
Sbjct: 69 PHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVT 128
Query: 147 GETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204
S R P+GV I +N P + + A+ G T V+KP+
Sbjct: 129 WTE---TRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264
P L ++ + G P GV++V+ G + + +PDI +F GS G+ + R A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245
Query: 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EW 322
+ K +G K+ +I+ D + + + +V + AGQ C+ + I + E
Sbjct: 246 EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTR-ILAPRSRYDEI 304
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
+ + AL V + P +GP+IS + + R+ I G++EGA L+ G
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG 357
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 280 bits (720), Expect = 7e-90
Identities = 88/357 (24%), Positives = 157/357 (43%), Gaps = 12/357 (3%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY-ETWSK 85
+ Y+ G++ S I++ +P + +V + E+E + K +
Sbjct: 16 VPVYPSYLAGEWGGSGQE--IEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARD 73
Query: 86 TSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
R VL + +II+ N+ AE + GK + A G+V + + +
Sbjct: 74 MPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKI 133
Query: 146 QGETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201
G+ + + + R PLGV A ITPFN+P + + GN V+KPS
Sbjct: 134 GGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS 193
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261
DP M V L AG PP + +++ I + A+SF GS + G+ + +
Sbjct: 194 ISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK 253
Query: 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
G K+ +G + +++ DA+ +++ + AGQRC A+ + V
Sbjct: 254 VGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKL-VLAERPVY 310
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ + E+ KR +L+V P D+GP+ISP A + +++ I+ V++G +L GR
Sbjct: 311 GKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR 367
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 3e-89
Identities = 105/361 (29%), Positives = 171/361 (47%), Gaps = 12/361 (3%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET---- 82
I T +L+I+G + I + NPAT ++ +P AT +++ AVA+AK A
Sbjct: 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGA 64
Query: 83 -WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI 141
W+ S R + L + + +LA+ + + GK L +A D+ E +
Sbjct: 65 DWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADL 124
Query: 142 PTIMQGETLAGVAKDMD-IHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVI 198
+ A V+ MD S+ R P+GV ITP+N+P ++ W A+A G ++
Sbjct: 125 AEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAIL 184
Query: 199 KPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGK 257
KPSE C+ L ++ + G PPGV+N++ G +A + HPD+ ++F GS G
Sbjct: 185 KPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244
Query: 258 YIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVG 317
I A+ K V +G K+ V+ D + + F GQ C A S + +
Sbjct: 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSR-LILH 303
Query: 318 EAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E++ E+L + K + +K+S G LGPV+S E+IL + + EGAT+L G
Sbjct: 304 ESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGG 363
Query: 376 R 376
Sbjct: 364 S 364
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 3e-89
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 9/360 (2%)
Query: 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTS 87
+ +G + I + PA NE + RV +A+ A+ E V A++A++ W+
Sbjct: 22 EENEGVYNGSWGGRGEV--ITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIP 79
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG 147
R +++ ++ + ++ ++ L ++ E GK L + G+V + + + + ++ G
Sbjct: 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGG 139
Query: 148 ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG- 206
L + P+G+ IT FNFP + W +A+ CGN + K +
Sbjct: 140 PILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLI 199
Query: 207 --ACMMLVD-MLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263
A ++ +L P + ++ G D + + +SF GS Q GK +
Sbjct: 200 SVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV 259
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
+ R +G N + DA+ S + + AA G AGQRC +F+ E++ E
Sbjct: 260 QERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARR-LFIHESIHDE 318
Query: 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+ LKK ++V P GP+ + QA L ++ EG T++ G+ +
Sbjct: 319 VVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRP 378
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 276 bits (709), Expect = 5e-88
Identities = 110/354 (31%), Positives = 176/354 (49%), Gaps = 11/354 (3%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSI 88
+IDG +VE + PAT E++ ++ ATPA +E A+ASAK+A + W+ S
Sbjct: 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSP 73
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCS-IPTIMQ 146
+ R ++L R +I++ L+ T + GK + + D G E P+ +
Sbjct: 74 MARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALN 133
Query: 147 GETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204
G+ + +Y RVPLGV GI +N+P I W A+ GN V KPSE
Sbjct: 134 GDYI----PLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENT 189
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264
P + + ++L +AG P G+ NVI G D + +HPD+ +S GS G+ + A
Sbjct: 190 PLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAA 249
Query: 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EW 322
+ K V +G K+ ++ DA+ + + + F ++GQ C T +FV + +
Sbjct: 250 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSN-GTRVFVQKKAKARF 308
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
L LK+R EA+ + T LGP++S +E++LS I+ G EGATL+ G
Sbjct: 309 LENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGG 362
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 275 bits (706), Expect = 1e-87
Identities = 104/355 (29%), Positives = 183/355 (51%), Gaps = 10/355 (2%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKT 86
+ + YIDG++VES + D+ NP EV+ V + T + E A+ +A++A+E+ WS+
Sbjct: 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQE 91
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
+ TR + + + + IK + + LA T + GKTL ++ D+ V +
Sbjct: 92 TAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDG 151
Query: 147 GETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204
GE + + D S + P+GV ITP+N+P + W A+A G + V+KPSE
Sbjct: 152 GEMID--SPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEIT 209
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263
P + + +++ + G P G +N+I GA + + + H ++ +SF G + GK+I +
Sbjct: 210 PLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNA 269
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
A N + +G KN +I DA+ ++Q + + AGQ C A S I V ++ +
Sbjct: 270 ANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSR-ILVQNSIKDK 328
Query: 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ L R + +K+ G T++GPVIS + + +I S + EGAT+ + G+
Sbjct: 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK 383
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 274 bits (703), Expect = 3e-87
Identities = 105/354 (29%), Positives = 179/354 (50%), Gaps = 10/354 (2%)
Query: 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSI 88
+I G+FV S++ + +PATNEV+ + E++ A +A +A++ WS+T
Sbjct: 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKA 85
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS-IPTIMQG 147
R++ L R+ +I+ + +LA + G+ L V R + M+
Sbjct: 86 KERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMED 145
Query: 148 ETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
T D D Y RVP G ITP+N P M+ W A+A GNT V+KP+E P
Sbjct: 146 RT---FPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSP 202
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264
L ++L +A PPGV N++ G +A + HP + ++ G + GK + A
Sbjct: 203 FTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA 262
Query: 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EW 322
+ KR+ +G K+ ++ +DA+ L+ +V F G+RC A S + V E + ++
Sbjct: 263 DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSR-LLVEEKIFEDF 321
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ ++ +RA A++V P T++GP+I P+ +R+L +++G EGA LL+ G
Sbjct: 322 VGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGE 375
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 272 bits (699), Expect = 2e-86
Identities = 102/355 (28%), Positives = 176/355 (49%), Gaps = 11/355 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYET--WSKT 86
++ +DGK V++ + ID +P EVV P+A+ ++ AVA+A+KA++ W +
Sbjct: 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRM 82
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
S R +++F++ ++I A ++LA + E GK +A A G++ + ++
Sbjct: 83 SGAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALE 142
Query: 147 GETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERD 204
G+T + D R P+GV ITP+NFP +I P AI G T V+KPSE
Sbjct: 143 GQTHNNIGDDR--LGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFT 200
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263
G + L ++ +AG P GV NV+ G A + + P++ ++F GS + G + E
Sbjct: 201 SGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
A+ KRV +G K ++ +DA+ + + + AGQ C++ S + V E +
Sbjct: 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSR-LLVQEGIRDA 319
Query: 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ L + + T +G +IS E++ S + +G+ GA LLL G
Sbjct: 320 LMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGE 374
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 270 bits (694), Expect = 3e-86
Identities = 99/352 (28%), Positives = 177/352 (50%), Gaps = 15/352 (4%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
++IDGK++ + +D+ NP + EV+ ++P + E + A+ +A+K E I R
Sbjct: 2 MFIDGKWINRE---DMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKR 58
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
+L + IK ++LA+ + + GK + A +V R + + + E +
Sbjct: 59 YNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIP 118
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+ D I + R P+G+ ITPFNFP + AIA GN V PS + P C+ L
Sbjct: 119 --SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIEL 176
Query: 212 VDMLTQA----GCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
++ A P GV N++ GA + V + I + + ISF GS + G+ I ++
Sbjct: 177 AKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGF- 235
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLP 324
K++ +G N +++ DA+ + +N L+ +F AGQ C+++ I V E++ +++
Sbjct: 236 -KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGM-ILVDESIADKFIE 293
Query: 325 ELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+A+ L V TD+GP+IS + E + +++ +DEG LLL G+
Sbjct: 294 MFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK 345
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 269 bits (691), Expect = 9e-86
Identities = 97/357 (27%), Positives = 175/357 (49%), Gaps = 16/357 (4%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
K +I+GK+ ++ D+ NP V+T AT ++E A A+KA + W+K++
Sbjct: 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTE 66
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG-E 148
R+ VL + + + N + I E G T+ + ++ + + ++++ + + G +
Sbjct: 67 DRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVK 126
Query: 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSERDP-G 206
+ + YR+PLGV + I+PFNFP + + P AIA GN+ V KP +
Sbjct: 127 EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAP-AIALGNSVVHKPDIQTAIS 185
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
++ AG P GV+NV+ + + + +P R ISF GS G++I E +
Sbjct: 186 GGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLV-GAAFGA---AGQRCMALSTVIFVGEAV- 320
KR+ +G N ++SDA+ +++ V A FG GQ CM ++ I V + V
Sbjct: 246 AFKRMALELGGNNPFAVLSDAD----VDRAVDAAIFGKFIHQGQICMIINR-IIVHQDVY 300
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E++ + R + L P T +GP+I+ + E+ L +I+ +G L ++G+
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 268 bits (686), Expect = 2e-84
Identities = 70/381 (18%), Positives = 128/381 (33%), Gaps = 32/381 (8%)
Query: 15 SHMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVA 74
SHM K ++ G+++ I L +P T + RV +
Sbjct: 2 SHMT---------ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSF 51
Query: 75 SAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQV 134
+ + + R L + +++A T G T D+ D+ G+
Sbjct: 52 AREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFT 111
Query: 135 VE---------QCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185
+ E+L+ H GV I FNFP+
Sbjct: 112 LSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEK 171
Query: 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGC-PPGVVNVIHGAHDAVNFICDHPDI 244
A+ G ++KP+ +V + AG PPG +++I G + +
Sbjct: 172 AAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG--SSAGLLDQIRSF 229
Query: 245 RAISFVGSDQAGKYIYERGAKNGKRVQSNM--GAKNHGVIMSDANRSNT-----LNQLVG 297
+SF GS + A + + N+ + N ++ +DA + ++V
Sbjct: 230 DVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVR 289
Query: 298 AAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKE 355
+GQ+C A+ FV EA L LK + + V +G ++S + E
Sbjct: 290 EMTVKSGQKCTAIRRA-FVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYE 348
Query: 356 RILSLIQSGVDEGATLLLDGR 376
+L+ I + +E
Sbjct: 349 NVLAGIAALREEAVLAYDSSA 369
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 2e-82
Identities = 116/377 (30%), Positives = 171/377 (45%), Gaps = 23/377 (6%)
Query: 10 LQRTPSHMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAE 68
P H+ R + T L+I+GK V + D I NP +EV+ ++ +A E
Sbjct: 514 RAAFPKHIAQVRTQLGK--TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTE 569
Query: 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV 128
+ A+A+AK A+ W T TR + L + + + +L+ E GK A DV
Sbjct: 570 VGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADV 629
Query: 129 LRGLQVVE----QCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184
+ +E + + G A H + P GV A I P+NFP I +
Sbjct: 630 TEAIDFLEYYAREMIRL----GQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685
Query: 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPD 243
M AI GN V KPS LV++ +AG P GV N G + +++ DHPD
Sbjct: 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPD 745
Query: 244 IRAISFVGSDQAGKYIYERGAK------NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVG 297
I I+F GS + G I ER AK N K++ S MG KN +I DA+ + ++
Sbjct: 746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLY 805
Query: 298 AAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKE 355
+AFG GQ+C A S + V +AV +++ L A+A KV P +G V +A +
Sbjct: 806 SAFGFQGQKCSACS-RVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMK 864
Query: 356 RILSLIQSGVDEGATLL 372
I + G EG L
Sbjct: 865 SIKEYAEIGKREGHVLY 881
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 257 bits (659), Expect = 6e-81
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 12/354 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
KL I+G+ V + + ++NPAT +V+ + +A+ ++++AV +A A+ W +T+
Sbjct: 24 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPK 82
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGE 148
R + L +L ++I+ N + AE + GK L A ++ + V + G
Sbjct: 83 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 142
Query: 149 TLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPG 206
+ S R PLGV A I P+N+P M+ W A+A GN V+KPSE P
Sbjct: 143 AAGEYLEGH--TSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 200
Query: 207 ACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
+ L ++ P GVVN++ G + + HP +R +S GS G++I A
Sbjct: 201 TALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWL 323
+ KR +G K ++ DA+ + + + AGQ C A + I+ + + +
Sbjct: 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTA-ACRIYAQKGIYDTLV 318
Query: 324 PELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEG-ATLLLDGR 376
+L LK A + T+LGP+ S ER+ ++ G ++ G
Sbjct: 319 EKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 372
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 256 bits (656), Expect = 2e-80
Identities = 110/357 (30%), Positives = 183/357 (51%), Gaps = 14/357 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKT 86
TK++I+ ++ S + + NPAT E + V + +++ AV +A++A++ W
Sbjct: 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 80
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIM 145
R ++L +L ++I+ + LA GK ++A D+ ++ + C +
Sbjct: 81 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 140
Query: 146 QGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
QG T + D + +Y P+GV I P+NFP ++ LW A++CGNT V+KP+E+
Sbjct: 141 QGRT---IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQ 197
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + + ++ +AG PPGVVN++ G A I H D+ ++F GS + GK I E
Sbjct: 198 TPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEA 257
Query: 263 GAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
K N KRV +G K+ ++ +DA+ N + F GQ C+A S +FV E++
Sbjct: 258 AGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASR-LFVEESIY 316
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E++ +RA+ + PG GP I + E+IL LI+SG EGA L G
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 373
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 255 bits (655), Expect = 3e-80
Identities = 84/370 (22%), Positives = 159/370 (42%), Gaps = 11/370 (2%)
Query: 12 RTPSHMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMES 71
+ + T + + + T+L I +F + NP T + + +A+ A++++
Sbjct: 8 SSGVDLGTENLYFQSMMDTQLLIGSRFEAGTE-AEEHILNPRTGAGIIDLAEASHAQIDA 66
Query: 72 AVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLR 130
AV +A++A+ WS+T+ R L ++ + I+ + A GK + + ++
Sbjct: 67 AVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPA 126
Query: 131 GLQVVEQCCSIPTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPV 188
+ + S R P+G+ I P+N+P M+ W
Sbjct: 127 IIDCWRFFAGAVRNLHAPAAGEYLPGH--TSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184
Query: 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAI 247
AI GNT V KPSE+ P + L ++ P GVVNVI G N + +HP + +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADIL-PEGVVNVITGRGETVGNALINHPKVGMV 243
Query: 248 SFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRC 307
S G GK + AK KR +G K ++ DA+ +N + + AGQ C
Sbjct: 244 SITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDC 303
Query: 308 MALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGV 365
A + I+ + + + +L ++ + + ++GP+IS + ++R+ S ++
Sbjct: 304 TA-ACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362
Query: 366 DEGATLLLDG 375
D+ + G
Sbjct: 363 DQKHIEITTG 372
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 255 bits (653), Expect = 8e-80
Identities = 99/357 (27%), Positives = 183/357 (51%), Gaps = 11/357 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTS 87
+L+I G+FV+++ + + NP V+ +V A ++++ AVA+AK+A+E W K +
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQ 146
R ++L+RL ++++ + ++LA + G A + V +Q +Q
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 147 GETL-AGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
G T+ A+ + + P+GV + P+N+P M+ W +A GNT VIKP++
Sbjct: 157 GATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ +AG P GVVN++ G+ + DHPD+R I F GS + GK+I +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 263 GAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I +D + + + + + F G+ C+A +FV E++
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIH 335
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+++ ++ + E +K+ T+ GP +++ Q GV EGATL+ G
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 253 bits (648), Expect = 3e-79
Identities = 103/357 (28%), Positives = 173/357 (48%), Gaps = 14/357 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKT 86
+++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++ W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIM 145
R ++L RL ++I+ + LA T + GK + D+ L+ +
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 146 QGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
G+T + D D SY P+GV I P+NFP ++ W A+A GN V+K +E+
Sbjct: 140 HGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQ 196
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + + +++ +AG PPGVVN++ G A I H D+ ++F GS + G+ I
Sbjct: 197 TPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVA 256
Query: 263 GAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
N KRV +G K+ +IMSDA+ + Q A F GQ A S FV E +
Sbjct: 257 AGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSR-TFVQEDIY 315
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E++ RA++ V T+ GP + ++IL I +G EGA LL G
Sbjct: 316 DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 3e-78
Identities = 100/361 (27%), Positives = 170/361 (47%), Gaps = 15/361 (4%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
+YIDG+FV + WID+ NPAT V++R+P + A+ +A++A W I
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAI 66
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVV----EQCCSIPTIM 145
R L ++ I+ +++ I EE GK AE +V + E
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRY---- 122
Query: 146 QGETLAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSERD 204
+GE + +I ++ LGVT GI P+NFP +I M P A+ GNT VIKPSE
Sbjct: 123 EGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAP-ALLTGNTIVIKPSEFT 181
Query: 205 PGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263
P + ++ + G P GV N++ G + +P + +S GS AG+ I
Sbjct: 182 PNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
AKN +V +G K ++M DA+ + +V + +GQ C + ++V + + +
Sbjct: 242 AKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNC-AERVYVQKGIYDQ 300
Query: 322 WLPELKKRAEALKVSAG-NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
++ L + +A++ +GP+I+ A ER+ + V+EGA + G+ ++
Sbjct: 301 FVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEG 360
Query: 381 G 381
Sbjct: 361 K 361
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 238 bits (610), Expect = 1e-73
Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 16/356 (4%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
+I G++V S +D ID+ +P+T +V+ +P A+ E+A+ A+ A + W+K +
Sbjct: 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTAR 72
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
TRQ +L N I+ N LA + EQGK L+ AE +V ++ C ++G+
Sbjct: 73 TRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDI 132
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPSER 203
L +D I+ ++VP GV GIT +NFP A+ P A+ GNT V+KP++
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGP------ALITGNTMVLKPTQE 186
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P A L + +AG P GV+NVI+G +C+ P + I+ GS AGK IY+
Sbjct: 187 TPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKT 246
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
A+ V +G K V+M DA+ + F GQ C ++V +V
Sbjct: 247 SAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTC-VERLYVHASVYD 305
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E++ + + LKV + +GP + + + I ++ + +GAT+ G+
Sbjct: 306 EFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGK 361
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 232 bits (593), Expect = 3e-71
Identities = 104/365 (28%), Positives = 186/365 (50%), Gaps = 24/365 (6%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
+ I+G+++++ + ID+ NPA + + VPK E +A+ +A +A W +
Sbjct: 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAK 69
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L N++ + LA +T EQGK LA+A+G++ +E + G+T
Sbjct: 70 ERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDT 129
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPSER 203
+ G D + + P+GVTA ITP+NFP AMI P A+A G T V+KP+ +
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP------ALAAGCTMVLKPASQ 183
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + + L ++ +AG P GV NV+ G A N + +P +R +SF GS + G+ + E+
Sbjct: 184 TPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQ 243
Query: 263 GAKNGKRVQSNMGAKNHG----VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
AK+ K+V +G G ++ DA+ + + + F AGQ C+ + ++V +
Sbjct: 244 CAKDIKKVSLELG----GNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQD 298
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
V + +L++ L + G G +GP+I +A ++ I +++GA ++ G+
Sbjct: 299 GVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 358
Query: 377 NLKVG 381
+ G
Sbjct: 359 AHERG 363
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 232 bits (593), Expect = 5e-71
Identities = 101/362 (27%), Positives = 184/362 (50%), Gaps = 24/362 (6%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
++ ++G+++++ I + NPA V+ VP + A ++ A+ ++ KA W+ +
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAK 92
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L + ++I AN +A +T EQGK LA+A G+VL +E + G+T
Sbjct: 93 ERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDT 152
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPSER 203
+ + R P+GVTA ITP+NFP AMI P A+A G T +++P++
Sbjct: 153 IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP------ALAAGCTMIVRPADL 206
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + L + +AG P GV+ ++ G A + + + +R +SF GS + G+ + +
Sbjct: 207 TPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQ 266
Query: 263 GAKNGKRVQSNMGAKNHG----VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
A KR+ +G G ++ DA+ ++ + + + AGQ C+ + I+V
Sbjct: 267 CAPTIKRISLELG----GNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVC-ANRIYVQR 321
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
V ++ +L + + LKV G PG +GP+I +A ++ + I+ V +GA L+ G+
Sbjct: 322 GVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK 381
Query: 377 NL 378
L
Sbjct: 382 EL 383
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 231 bits (592), Expect = 5e-71
Identities = 62/358 (17%), Positives = 117/358 (32%), Gaps = 29/358 (8%)
Query: 39 VESKATDWIDLHNPATNEVV-TRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFR 97
+ + + N T E + P T E+ A +A K + + + R +L
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRT 60
Query: 98 LQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ--------VVEQCCSIPTIMQGET 149
+ + ++A + E G++ R V +
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNP 120
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPSERDPGA 207
DI ++ LG A NFP A+A G ++K PG
Sbjct: 121 TRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 208 CMMLVDMLTQA----GCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
++ + + QA P + ++ G + HP+I+A+ F GS G+ ++
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 263 GAKNGKRVQSN--MGAKNHGVIMSDA--NRSNTLNQLVGAAFGAAGQRCMALSTVIFV-G 317
+ + + +GA N I A +++ +Q V + GQ C V +
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNT 300
Query: 318 EAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
+ A + P T L P I + ++ + G D+G +
Sbjct: 301 PETQAF-----IETAQSLIRQQSPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQ 350
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 231 bits (591), Expect = 6e-71
Identities = 105/360 (29%), Positives = 178/360 (49%), Gaps = 14/360 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
+ YI G++ + + ++ +PAT E + VPK AE A+ +A+ A+ W +
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAK 72
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L R +++ AN LA +T EQGK LA+A+G++ +E + G+T
Sbjct: 73 ERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDT 132
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
L + I + P+GV A ITP+NFP AMI + P A+A G V+KP+E P +
Sbjct: 133 LPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP-ALAAGCPIVVKPAESTPFSA 191
Query: 209 MMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267
+ + + +AG P GV++V+ G I +P +R +SF GS G+ + + A
Sbjct: 192 LAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251
Query: 268 KRVQSNMGAKNHG----VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
K++ +G G ++ DA+ + + + + GQ C+ + FV E V
Sbjct: 252 KKLTLELG----GNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVC-TNRFFVHERVYDA 306
Query: 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+ +L LKV G G LGP+I+ A +++ S I + +GA+L+ G+ +G
Sbjct: 307 FADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALG 366
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 3e-70
Identities = 96/360 (26%), Positives = 175/360 (48%), Gaps = 14/360 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
YI G++ +S D++NPAT V+ +VP ++ +AV + + A + I
Sbjct: 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIE 71
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
TR++ L +++ +K N +++ + E GK +A+G+V + C + + T
Sbjct: 72 TRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHT 131
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
+ KD + P+GVT I P+NFP MI + A+A G VIKP+ P
Sbjct: 132 IPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSA-ALAAGCPSVIKPASETPLTM 190
Query: 209 MMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267
+ ++ + P G+VN++ G A +C+H D+ +SF GS + G+ + A+
Sbjct: 191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQV 250
Query: 268 KRVQSNMGAKNHG----VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--E 321
K++ +G G ++ DA+ + L+ F GQ C+ + IFV E V
Sbjct: 251 KKLALELG----GNAPFIVFDDADLEAAADNLIANKFRGGGQTCVC-ANRIFVHEKVADA 305
Query: 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+ +L +R + V G G D+GP+I+ Q +++ +Q +D+GA+L+ + ++G
Sbjct: 306 FGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELG 365
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 238 bits (609), Expect = 5e-70
Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 5/340 (1%)
Query: 38 FVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFR 97
F A D + A + + ATP + +AVA+A+ + WS+T R L +
Sbjct: 521 FGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQ 580
Query: 98 LQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQ-CCSIPTIMQGETLAGVAKD 156
+++++ + E GKTL DA ++ + ET
Sbjct: 581 AAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTG 640
Query: 157 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT 216
GV I+P+NFP I L A+ GN+ V KP+E+ P V +L
Sbjct: 641 ESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700
Query: 217 QAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG---KRVQSN 273
+AG P + ++ G + HPDI + F GS + + I A + +
Sbjct: 701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAE 760
Query: 274 MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE-AVEWLPELKKRAEA 332
G N + + A + +V +AF +AGQRC AL + + A + + A
Sbjct: 761 TGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARE 820
Query: 333 LKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
LK+ + T +GPVI +AK+R+ + I E
Sbjct: 821 LKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHF 860
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 224 bits (574), Expect = 2e-68
Identities = 107/369 (28%), Positives = 173/369 (46%), Gaps = 30/369 (8%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
T ++ G+++ + AT + +PA+ + V E +AV +A +A+ W + S
Sbjct: 13 TDSFVGGRWLPAAAT--FPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAK 70
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L + N++ N LA IT E GK L +A G++L +E + G+
Sbjct: 71 ERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDI 130
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPSER 203
+ AKD + P+GV A ITP+NFP AMI A+A G T V+KP+E
Sbjct: 131 IHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGA------ALAAGCTVVVKPAED 184
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG----AHDAVNFICDHPDIRAISFVGSDQAGKYI 259
P + + L ++ +QAG P GV NVI A + IC P + ISF GS GK +
Sbjct: 185 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 244
Query: 260 YERGAKNGKRVQSNMGAKNHG----VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIF 315
A + KRV +G G ++ AN + + + F GQ C+ S
Sbjct: 245 LHHAANSVKRVSMELG----GLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVC-SNQFL 299
Query: 316 VGEAV--EWLPELKKRAEA-LKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
V + ++ + + L+V G GT GP+I+ +A E++ + V +GAT++
Sbjct: 300 VQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVV 359
Query: 373 LDGRNLKVG 381
G+ ++G
Sbjct: 360 TGGKRHQLG 368
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 1e-66
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 30/345 (8%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
NP TNE T +++ A+ A Y+ W +R ++L + N +K +
Sbjct: 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHE 65
Query: 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI--------PTIMQGETLAGVAKDMD 158
+LA+ +T E GK L++++ + VE C SI P +++ L +
Sbjct: 66 DELAKMMTLEMGKLLSESKEE-------VELCVSICNYYADHGPEMLKPTKLNSDLGNAY 118
Query: 159 IHSYRVPLGVTAGITPFNFPAMIPLWMF-----PVAIACGNTHVIKPSERDPGACMMLVD 213
+ GV P+NF PL+ P GN ++K + PG+ +
Sbjct: 119 YL--KQSTGVIMACEPWNF----PLYQVIRVFAP-NFIVGNPILLKHAHNVPGSAALTAK 171
Query: 214 MLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN 273
++ +AG P G + ++ ++D + I P I+ ++ GS++ G + E KN K+
Sbjct: 172 IIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTME 231
Query: 274 MGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAE 331
+G + +++ DA+ N L A GQ C + S I V ++ E L ELK
Sbjct: 232 LGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTS-SKRIIVEKSRYDEVLHELKNVFS 290
Query: 332 ALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
LK T L P+ S +AKE++ + ++ +D GA +
Sbjct: 291 NLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYP 335
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 218 bits (559), Expect = 2e-66
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 30/341 (8%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT + + +P A E+E A++ A ++ W TS+ R Q L + ++A+ +++A
Sbjct: 13 NPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMA 72
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSI--------PTIMQGETLAGVAKDMDIHSY 162
+ IT E GK + A + V + ++ P ++ E + I
Sbjct: 73 QCITREMGKPIKQARAE-------VTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIE-- 123
Query: 163 RVPLGVTAGITPFNFPAMIPLWMF-----PVAIACGNTHVIKPSERDPGACMMLVDMLTQ 217
PLGV I P+NF PLW P + GN++++K + G M+ +L +
Sbjct: 124 YRPLGVILAIMPWNF----PLWQVLRGAVP-ILLAGNSYLLKHAPNVTGCAQMIARILAE 178
Query: 218 AGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAK 277
AG P GV ++ ++ V+ + + P I A++ GS +AG I + K+ +G
Sbjct: 179 AGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGS 238
Query: 278 NHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKV 335
+ ++++DA+ + V + GQ C A + V E + + A ALK+
Sbjct: 239 DPFIVLNDADLELAVKAAVAGRYQNTGQVCAA-AKRFIVEEGIAQAFTDRFVAAAAALKM 297
Query: 336 SAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
V DLGP+ ++ + +Q+ V EGA LLL G
Sbjct: 298 GDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGE 338
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 2e-60
Identities = 80/365 (21%), Positives = 140/365 (38%), Gaps = 33/365 (9%)
Query: 32 LYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
+ + V + D +P V + A A + A+ +A A + W +
Sbjct: 66 CVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMAD 123
Query: 91 RQQVLFRLQNIIKA-NMKQLAENITEEQGKTLADAEGDVLRGL---------QVVEQCCS 140
R QV + +++ ++ QGKT+ AE D L VE
Sbjct: 124 RAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGE 183
Query: 141 IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
P + T + YR G A I+PFNF A I + GN + KP
Sbjct: 184 QPISVPPST--------NHTVYRGLEGFVAAISPFNFTA-IGGNLAGAPALMGNVVLWKP 234
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYI 259
S+ A + +L +AG PP ++ + + + + I+F GS K++
Sbjct: 235 SDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHL 294
Query: 260 YERGAKNG------KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV 313
+ + A+N R+ G KN + S A+ + ++ + +AF GQ+C A S
Sbjct: 295 WRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACS-R 353
Query: 314 IFVGEAV--EWLPELKKRAEALKV-SAGNVPGTDLGPVISPQAKERILSLIQSGVDEGAT 370
++V +++ + L + +KV GT VI +A RI ++ +
Sbjct: 354 LYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL 413
Query: 371 LLLDG 375
+L G
Sbjct: 414 SILAG 418
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 6e-60
Identities = 69/349 (19%), Positives = 125/349 (35%), Gaps = 30/349 (8%)
Query: 29 TTKLYIDGKFVESKAT-DWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTS 87
K + G++++ T H PA + V T + A +A++A+ T+ +S
Sbjct: 29 KGKHLVAGEWLDGAGTFASAPAHGPAHDFAV-----GTVELVNRACEAAEEAFWTYGYSS 83
Query: 88 IITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ--------VVEQCC 139
R L + + I+A + + E ++E G A G+ R + +
Sbjct: 84 RKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDY 143
Query: 140 SIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPL--WMFPVAIACGNTHV 197
+ A +I + P+G A NFP A+A G V
Sbjct: 144 LDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVV 203
Query: 198 IKPSERDPGACMMLVDMLTQA----GCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGS 252
+K PG ++ + + A G PGV ++I G V + + HP I+A+ F GS
Sbjct: 204 VKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGS 263
Query: 253 DQAGKYIYERGAKNGKRVQSN--MGAKNHGVIMSDA--NRSNTL-NQLVGAAFGAAGQRC 307
G+ +++ A + + +G+ N ++ +A R+ TL G+ AGQ C
Sbjct: 264 LAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFC 323
Query: 308 MALSTVIFVGEAVEW---LPELKKRAEALKVSAGNVPGTDLGPVISPQA 353
+ V E + + + G
Sbjct: 324 TN-PGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQAR 371
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 6e-53
Identities = 66/353 (18%), Positives = 129/353 (36%), Gaps = 30/353 (8%)
Query: 64 ATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLAD 123
+ E+ + + SA KA + + S ++ + + ++LA+ EE G +
Sbjct: 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 124 AEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183
+ + + M+ + + + VPLGV AG+ P P +
Sbjct: 69 DKVIKNVF--ASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126
Query: 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQ----AGCPPGVVNVIHGA-HDAVNFI 238
+ ++I GN+ V P A + V ++++ AGCP G ++ + + +
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186
Query: 239 CDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGA 298
H D I G K Y +G I AN + ++ +
Sbjct: 187 MKHKDTAVILATGGSAMVKAAY----SSGTPAIGVGPGNGPAFIERSANIPRAVKHILDS 242
Query: 299 AFGAAGQRCMALSTVIFVGEAV--EWLPELKKR-------AEALKVSAG-NVPGTDLGPV 348
G C + +V+ V + E +K+ AEA+++ P + P
Sbjct: 243 KTFDNGTICASEQSVV-VERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPA 301
Query: 349 ISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINVPI------PVPLSMFSF 395
I ++ + I +L V A +L+ KVG +P P+ L+ ++
Sbjct: 302 IVGKSVQHIANLAGLTVPADARVLIAEET-KVGAKIPYSREKLAPI-LAFYTA 352
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 3e-49
Identities = 57/335 (17%), Positives = 105/335 (31%), Gaps = 32/335 (9%)
Query: 61 VPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKT 120
+P AE+++ +A KKA E ++ S ++ LA+ EE G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60
Query: 121 LADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA---KDMDIHSYRVPLGVTAGITPFNF 177
+ + + I + E G+ ++ + P+G+ GI P
Sbjct: 61 IVEDKVIKNHFA-----SEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTN 115
Query: 178 PAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA----GCPPGVVNVIHGA-H 232
P ++ +++ N + P R + ++ A G P ++ I
Sbjct: 116 PTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSV 175
Query: 233 DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTL 292
+ N + H DI I G K Y +GK VI A+ +
Sbjct: 176 ELSNALMKHDDIALILATGGPGMVKAAY----SSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 293 NQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVIS 350
++ + G C + VI V + V E + +I
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVI-VVDEVYDEVKERFASHKAHVLSKTDADKVRK-VLLID 289
Query: 351 PQAKERILSLIQSGVDEGATLLLDGRNLKVGINVP 385
+I+ + + E A G+ VP
Sbjct: 290 GALNAKIVGQPATAIAEMA-----------GVKVP 313
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 9e-18
Identities = 75/320 (23%), Positives = 135/320 (42%), Gaps = 29/320 (9%)
Query: 61 VPKATP-AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGK 119
VP+ + +++ AV A+ A+ + + R Q L LQ +I+ ++L + + K
Sbjct: 11 VPRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHK 70
Query: 120 TLADAE----GDVLRGLQVVEQCCSIPTIMQGETLAG--VAKDMDIHSYRVPLGVTAGIT 173
+A VL ++ + Q +P E + + +++ + PLGV I
Sbjct: 71 NEWNAYYEEVVYVLEEIEYMIQK--LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIG 128
Query: 174 PFNFPAMIPLWMFPV--AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA 231
+N+P L + P+ AIA GN V+KPSE +L ++ Q + VI+G
Sbjct: 129 TWNYPFN--LTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG 185
Query: 232 HDAVNFICDHP-DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSN 290
+ D I + GS GK I AK+ V +G K+ + + +
Sbjct: 186 VPETTELLKERFDH--ILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDV 243
Query: 291 TLNQLVGAAFGAAGQRCMALSTV--IFVGEAV--EWLPELKKRAEALKVSAGNVPGT--D 344
++ F +GQ C+A I ++ + + +LKK +LK G D
Sbjct: 244 ACRRIAWGKFMNSGQTCVA---PDYILCDPSIQNQIVEKLKK---SLKEFYGEDAKKSRD 297
Query: 345 LGPVISPQAKERILSLIQSG 364
G +IS + +R++ LI+
Sbjct: 298 YGRIISARHFQRVMGLIEGQ 317
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 9e-16
Identities = 80/338 (23%), Positives = 145/338 (42%), Gaps = 38/338 (11%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
+ ++ + +PA+++S ++ K + T + + R+Q L RL+ + N + L
Sbjct: 12 SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 111 ENITEEQGKTLADAE----GDVLRGLQVV---------EQCCSIPTIMQGETLAGVAKDM 157
+ E+ GK + G VL + P I+
Sbjct: 72 SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAP---------S 122
Query: 158 DIHSYRVPLGVTAGITPFNFP---AMIPLWMFPV-AIACGNTHVIKPSERDPGACMMLVD 213
+ + + P GVT I PFN+P + PL + AI GNT +IKPSE P ++
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPL----IGAIIGGNTCIIKPSETTPETSAVIEK 178
Query: 214 MLTQAGCPPGVVNVIHGAHDAVNFICDHP-DIRAISFVGSDQAGKYIYERGAKNGKRVQS 272
++ +A P V VI G D + + P D I F GS GK + + AK+ V
Sbjct: 179 IIAEA-FAPEYVAVIQGGRDENSHLLSLPFDF--IFFTGSPNVGKVVMQAAAKHLTPVVL 235
Query: 273 NMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEA 332
+G K +++ DA+ T+NQL+ F +GQ +A + + L L++ E
Sbjct: 236 ELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDAL--LERLVER 293
Query: 333 LKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGAT 370
+K + G +++ + +R++SL+++ +
Sbjct: 294 VKTELPEIN--STGKLVTERQVQRLVSLLEATQGQVLV 329
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 9e-04
Identities = 51/308 (16%), Positives = 102/308 (33%), Gaps = 87/308 (28%)
Query: 37 KFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLF 96
K+++ + D L P EV+T P+ + S + TW +
Sbjct: 309 KYLDCRPQD---L--P--REVLTTNPRR----LSIIAESIRDGLATWDNW----KHVNCD 353
Query: 97 RLQNIIKANMKQLAENITEEQGKTLA----DA--EGDVLRGL----------QVVEQCC- 139
+L II++++ L + L+ A +L + VV +
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413
Query: 140 -------------SIPTIMQGETLAGVAKDMDIH-----SYRVPLGVTAGITPFNFPAMI 181
SIP+I E + + +H Y +P F+ +I
Sbjct: 414 YSLVEKQPKESTISIPSI-YLELKVKLENEYALHRSIVDHYNIPKT-------FDSDDLI 465
Query: 182 PLWM---FPVAIACGNTHV--IKPSERDPGACMMLVDM----------LTQAGCPPGVVN 226
P ++ F I H+ I+ ER M+ +D T ++N
Sbjct: 466 PPYLDQYFYSHIG---HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522
Query: 227 VIHGAHDAVNFICD-HPD----IRAI-SFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHG 280
+ +ICD P + AI F+ + + + +K ++ + A++
Sbjct: 523 TLQQLKFYKPYICDNDPKYERLVNAILDFL--PKIEENLIC--SKYTDLLRIALMAEDEA 578
Query: 281 VIMSDANR 288
+ +A++
Sbjct: 579 IF-EEAHK 585
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 91.16 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-93 Score=740.74 Aligned_cols=399 Identities=29% Similarity=0.480 Sum_probs=374.0
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+.+.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 45568999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||+.+++. |+..+++.++||+++.+.+.++..+ ...+...+++++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE-EETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccc-ccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999986 6999999999999998888777665 345667889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHH-Hh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE-RG 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~-~a 263 (445)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|.+ .+
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999 4678999999999999999999999998876 55
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
++++||++||||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|||.++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRV-FIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceee-ccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 67899999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++++|||+++.+++++.++|++++++||++++||.+..
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999996311
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||++... .+.+||||+|+||+| +++|++||++||+.|+
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PFGG~k~SG~G--re~G~~gl~~ft~~K~ 478 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES-PAEMPVGGYKQSGVG--RENGLTTLAHYTRIKS 478 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC-CCCCCcccccccccC--chhHHHHHHHhhceeE
Confidence 999986554 478999999999999 6799999999999999
Q ss_pred EEeecccc
Q psy10608 423 VTQLWRES 430 (445)
Q Consensus 423 v~~~~~~~ 430 (445)
|++++.+.
T Consensus 479 v~i~~g~~ 486 (490)
T 2wme_A 479 VQVELGDY 486 (490)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99887543
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-89 Score=714.27 Aligned_cols=406 Identities=22% Similarity=0.374 Sum_probs=372.4
Q ss_pred cccccccccccccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q psy10608 16 HMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVL 95 (445)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L 95 (445)
..++||.++.+|...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L 90 (498)
T 4f3x_A 12 DLGTENLYFQSMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNAL 90 (498)
T ss_dssp -----------CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCccchhhhhccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 35678999999998999999999988766 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECC
Q psy10608 96 FRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITP 174 (445)
Q Consensus 96 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 174 (445)
+++++.|++++++|++++++|+|||..++ +.|+..+++.++||++..+.+.++..+....+...++.++|+|||++|+|
T Consensus 91 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 170 (498)
T 4f3x_A 91 LKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAP 170 (498)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECC
Confidence 99999999999999999999999999999 88999999999999998877766554422345678899999999999999
Q ss_pred CCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCH
Q psy10608 175 FNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSD 253 (445)
Q Consensus 175 ~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~ 253 (445)
||||+.+.++++++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+| +.+++++|+.||+|++|+||||+
T Consensus 171 wN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~ 249 (498)
T 4f3x_A 171 WNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDI 249 (498)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999999 56789999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHH
Q psy10608 254 QAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAE 331 (445)
Q Consensus 254 ~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~ 331 (445)
++|+.|++.+++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++
T Consensus 250 ~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~ 328 (498)
T 4f3x_A 250 ATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRI-YAEAGIYEKLVADLTSAVS 328 (498)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEE-EEETTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceE-EecHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7777 6999999999999
Q ss_pred hccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC-EEEeCCccce-------------------------------
Q psy10608 332 ALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGA-TLLLDGRNLK------------------------------- 379 (445)
Q Consensus 332 ~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga-~~~~GG~~~~------------------------------- 379 (445)
++++|+|.|+++++|||+++++++++.++|++++++|| ++++||....
T Consensus 329 ~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 408 (498)
T 4f3x_A 329 TIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVS 408 (498)
T ss_dssp TCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred hcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEE
Confidence 99999999999999999999999999999999999999 9999996310
Q ss_pred --------------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHH
Q psy10608 380 --------------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFY 415 (445)
Q Consensus 380 --------------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~ 415 (445)
||||++.... +.+||||+|+||+| +++|++||+
T Consensus 409 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~G--r~~G~~~l~ 485 (498)
T 4f3x_A 409 VTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT-NEMPHGGIKQSGYG--KDMSVYALE 485 (498)
T ss_dssp EEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCSGGGEEC--CBSHHHHHH
T ss_pred EEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCcCCcCcCCcC--ccchHHHHH
Confidence 9999876554 78999999999999 679999999
Q ss_pred HhheeEEEEeec
Q psy10608 416 FYTETKTVTQLW 427 (445)
Q Consensus 416 ~~~~~k~v~~~~ 427 (445)
+||+.|+|++.+
T Consensus 486 ~~t~~k~v~~~~ 497 (498)
T 4f3x_A 486 DYTAVRHIMINH 497 (498)
T ss_dssp HTEEEEEEEEEC
T ss_pred HhhceEEEEEeC
Confidence 999999998764
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-89 Score=713.10 Aligned_cols=415 Identities=27% Similarity=0.419 Sum_probs=378.4
Q ss_pred CCCCCccccccccccc----cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHh--hhh
Q psy10608 10 LQRTPSHMKTFRQFIR----HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY--ETW 83 (445)
Q Consensus 10 ~~~~~~~~~~~~~~~~----~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~--~~w 83 (445)
-+...++|..+.+.+. .....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|
T Consensus 9 ~~~~~~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w 88 (520)
T 3ed6_A 9 SGVDLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEW 88 (520)
T ss_dssp ----------CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccCCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccccc
Confidence 4556677777755552 3356689999999998888899999999999999999999999999999999999 899
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEE
Q psy10608 84 SKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYR 163 (445)
Q Consensus 84 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 163 (445)
+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+..+++.++||++..+.+.++..+....+...++.+
T Consensus 89 ~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~ 168 (520)
T 3ed6_A 89 SQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVK 168 (520)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999988877766554222456778999
Q ss_pred ecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCC
Q psy10608 164 VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHP 242 (445)
Q Consensus 164 ~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~ 242 (445)
+|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|+||+|+| +.++++.|+.||
T Consensus 169 ~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p 248 (520)
T 3ed6_A 169 EPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHK 248 (520)
T ss_dssp EECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCT
T ss_pred cCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 568899999999
Q ss_pred CccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cc
Q psy10608 243 DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AV 320 (445)
Q Consensus 243 ~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~ 320 (445)
+|++|+||||+++|+.|++.+++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|
T Consensus 249 ~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d 327 (520)
T 3ed6_A 249 EVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRI-LVQNSIKD 327 (520)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEE-EEEHHHHH
T ss_pred CcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceE-EEcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 7777 69
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e---------------
Q psy10608 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------K--------------- 379 (445)
Q Consensus 321 ~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~--------------- 379 (445)
+|+++|+++++++++|||.|+++++||++++++++++.++|++++++||++++||... .
T Consensus 328 ~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~ 407 (520)
T 3ed6_A 328 KFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTS 407 (520)
T ss_dssp HHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCC
Confidence 9999999999999999999999999999999999999999999999999999998641 0
Q ss_pred ----------------------------------------------------------EEEeCCCCCCCCCCccCCCCCC
Q psy10608 380 ----------------------------------------------------------VGINVPIPVPLSMFSFTGSRGS 401 (445)
Q Consensus 380 ----------------------------------------------------------V~iN~~~~~~~~~~pfGG~k~S 401 (445)
||||++... .+.+||||+|+|
T Consensus 408 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-~~~~PfGG~k~S 486 (520)
T 3ed6_A 408 MRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-FAQAPWGGYKQS 486 (520)
T ss_dssp SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC-CTTSCBCCSGGG
T ss_pred CccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcC
Confidence 999987655 478999999999
Q ss_pred ccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 402 FLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 402 G~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+| +++|++||++||+.|+|++.+.
T Consensus 487 G~G--re~G~~gl~~~t~~k~v~~~~~ 511 (520)
T 3ed6_A 487 GIG--RELGKEGLEEYLVSKHILTNTN 511 (520)
T ss_dssp EES--CBSHHHHHHTTEEEEEEEEESS
T ss_pred cCC--ccchHHHHHHhhceEEEEEcCC
Confidence 999 6799999999999999998764
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-89 Score=712.88 Aligned_cols=403 Identities=43% Similarity=0.745 Sum_probs=376.7
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
|...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 103 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNM 103 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
++|++++++|+|||..+++.|+..+++.++||+++.+++.+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 104 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 183 (521)
T 4e4g_A 104 NELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMF 183 (521)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988777766544322345567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+.+.++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 184 a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 263 (521)
T 4e4g_A 184 APAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMN 263 (521)
T ss_dssp HHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.++++
T Consensus 264 lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~ 342 (521)
T 4e4g_A 264 GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVA-VPVGEETANRLIDKLVPMVESLRIGPYTDEKA 342 (521)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEE-EEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTC
T ss_pred CCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEE-EEeCchHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999 6665 4999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e--------------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------K-------------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~-------------------------------------- 379 (445)
++||++++++++++.++|++++++||++++||... .
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 422 (521)
T 4e4g_A 343 DMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEE 422 (521)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999998421 0
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+++....+.+||||+|+||+|+.+++|++||++||+.|+|+
T Consensus 423 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~ 502 (521)
T 4e4g_A 423 ALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTIT 502 (521)
T ss_dssp HHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEE
Confidence 999987655457899999999999965579999999999999999
Q ss_pred eecccc
Q psy10608 425 QLWRES 430 (445)
Q Consensus 425 ~~~~~~ 430 (445)
+++.++
T Consensus 503 ~~~~~~ 508 (521)
T 4e4g_A 503 SRWPSG 508 (521)
T ss_dssp ECCCCC
T ss_pred EecCcc
Confidence 887654
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-89 Score=709.23 Aligned_cols=394 Identities=28% Similarity=0.446 Sum_probs=370.6
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||+...+...+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999998877766665543234567889999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~ 251 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999994 678999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.++++++
T Consensus 252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 330 (484)
T 3ifg_A 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRF-FVHERVYDAFADKLAAAVSKLKVGRGTESGATL 330 (484)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------- 379 (445)
|||+++++++++.++|++++++||++++||....
T Consensus 331 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 410 (484)
T 3ifg_A 331 GPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLAN 410 (484)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHh
Confidence 9999999999999999999999999999986310
Q ss_pred -----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||++... .+.+||||+|+||+| +++|++||++||+.|+|++.
T Consensus 411 ~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~SG~G--r~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 411 DTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLIS-NEVAPFGGVKQSGLG--REGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp CSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC-CSSSCBCCEETTEEC--CBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcCcCC--CCchHHHHHHhhceEEEEEe
Confidence 999986544 578999999999999 67999999999999999863
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-88 Score=709.66 Aligned_cols=395 Identities=28% Similarity=0.473 Sum_probs=371.5
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34789999999987888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||+.+.+...+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 191 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP 191 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998887776655443334566789999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~l 271 (504)
T 3ek1_A 192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTI 271 (504)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999998 4678899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++++++
T Consensus 272 k~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 350 (504)
T 3ek1_A 272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRI-YVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVI 350 (504)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEE-EEehhHHHHHHHHHHHHHhhcccCCCccccCcc
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------- 379 (445)
||++++++++++.++|++++++||++++||....
T Consensus 351 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 430 (504)
T 3ek1_A 351 GPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDT 430 (504)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCS
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999999999999986200
Q ss_pred ---------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ---------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ---------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||++... .+.+||||+|+||+| +++|++|+++||+.|+|++.+
T Consensus 431 ~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 431 IFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLIS-NEVAPFGGVKQSGLG--REGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp SCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCC-CSSSCBCCSGGGEES--CBSTTTSGGGGEEEEEEEEEC
T ss_pred CCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCcCCcCcCcCC--CCCcHHHHHHhhceEEEEEec
Confidence 999987643 578999999999999 679999999999999999765
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-88 Score=705.25 Aligned_cols=396 Identities=26% Similarity=0.434 Sum_probs=372.2
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENR 88 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 34568999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEE-ecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYR-VPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++.|+..+++.++||++..+...+...+. ..+...++.+ +|+|||++|+|||||+.+.+++
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 167 (506)
T 3rh9_A 89 EEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE-KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKK 167 (506)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSC-CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceeeEeecccceEEEEECCCchHHHHHHHH
Confidence 9999999999999999999999999999999999887776665442 2455678889 9999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.+++++|+.||+||+|+||||+++|+.|+++++
T Consensus 168 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa 247 (506)
T 3rh9_A 168 LSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA 247 (506)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678899999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++
T Consensus 248 ~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 326 (506)
T 3rh9_A 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRI-FVHEKVADAFGQKLAERVNKMTVGDGMNDG 326 (506)
T ss_dssp TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEE-EEETTTHHHHHHHHHHHHHHCCBSCTTSTT
T ss_pred hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEE-EEcHHHHHHHHHHHHHHHHhccCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e----------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K---------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~---------------------------------------- 379 (445)
+++|||+++++++++.++|++++++||++++||... .
T Consensus 327 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (506)
T 3rh9_A 327 IDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVI 406 (506)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHH
Confidence 999999999999999999999999999999999631 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|++.
T Consensus 407 ~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~K~v~~~ 483 (506)
T 3rh9_A 407 DAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP-TPEAPFGGMKASGIG--REGGLEGLFEFVEAQTVPRG 483 (506)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTEEEEEEEEC
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCccCcCcCcCC--cCccHHHHHHhcceEEEEEc
Confidence 999997665 467999999999999 67999999999999999875
Q ss_pred c
Q psy10608 427 W 427 (445)
Q Consensus 427 ~ 427 (445)
.
T Consensus 484 ~ 484 (506)
T 3rh9_A 484 F 484 (506)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-88 Score=702.98 Aligned_cols=399 Identities=30% Similarity=0.426 Sum_probs=374.8
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
.+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 88 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIREN 88 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 44667899999999988888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+++|++++++|+|||..+++.|+..+++.++|++...+...+...+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 89 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 168 (497)
T 3k2w_A 89 KHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999888777665542234567789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa 248 (497)
T 3k2w_A 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248 (497)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++
T Consensus 249 ~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 327 (497)
T 3k2w_A 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERL-YVHASVYDEFMAKFLPLVKGLKVGDPMDAD 327 (497)
T ss_dssp TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEE-EEeHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--c----e-------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN--L----K------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--~----~------------------------------------- 379 (445)
+++||++++++++++.++|++++++||++++||.. . .
T Consensus 328 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 407 (497)
T 3k2w_A 328 SQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSME 407 (497)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999962 0 0
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++.... +.+||||+|+||+| +++|++||++||+.|+|
T Consensus 408 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v 484 (497)
T 3k2w_A 408 QAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ-HQGFHNGWKQSGFG--GEDGKFGLEQYLEKKTV 484 (497)
T ss_dssp HHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCEETSEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC-CCCCcCCcCCCcCC--ccchHHHHHHhcceEEE
Confidence 9999976654 78999999999999 67999999999999999
Q ss_pred Eeecc
Q psy10608 424 TQLWR 428 (445)
Q Consensus 424 ~~~~~ 428 (445)
++++.
T Consensus 485 ~~~~~ 489 (497)
T 3k2w_A 485 YINEA 489 (497)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 98753
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-87 Score=701.34 Aligned_cols=400 Identities=29% Similarity=0.456 Sum_probs=372.1
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh-----hhcCCCHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-----TWSKTSIITRQQVLFRLQN 100 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~ 100 (445)
.++..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++
T Consensus 4 ~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~ 83 (503)
T 3iwj_A 4 PIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAA 83 (503)
T ss_dssp CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHH
T ss_pred CCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHH
Confidence 35566899999999988888999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccc-c--ccCCCCceeEEEecCCeEEEECCCCc
Q psy10608 101 IIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL-A--GVAKDMDIHSYRVPLGVTAGITPFNF 177 (445)
Q Consensus 101 ~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~I~p~N~ 177 (445)
.|++++++|++++++|+|||..+++.|+..+++.++||+...+.+.+... + ....+...++.++|+|||++|+||||
T Consensus 84 ~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 84 KVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 99999999999999999999999999999999999999988776654431 1 11134567899999999999999999
Q ss_pred chhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHH
Q psy10608 178 PAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAG 256 (445)
Q Consensus 178 P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g 256 (445)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .+.++.|+.||+|++|+||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 999999999999999999999999999999999999999999999999999995 5788999999999999999999999
Q ss_pred HHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcc
Q psy10608 257 KYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALK 334 (445)
Q Consensus 257 ~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~ 334 (445)
+.|++.+++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|++++++++
T Consensus 244 ~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL-ILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEE-EEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCee-EEcHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999 7777 6999999999999999
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----e-------------------------------
Q psy10608 335 VSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----K------------------------------- 379 (445)
Q Consensus 335 vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----~------------------------------- 379 (445)
+|||.++++++|||+++++++++.++|++++++||++++||... .
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 99999999999999999999999999999999999999998531 0
Q ss_pred ------------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHh
Q psy10608 380 ------------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFY 417 (445)
Q Consensus 380 ------------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~ 417 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~g~~~f 479 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPC-FTQAPWGGVKRSGFG--RELGEWGLDNY 479 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTT
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcccCC--CcchHHHHHHh
Confidence 999987544 478999999999999 67999999999
Q ss_pred heeEEEEeeccc
Q psy10608 418 TETKTVTQLWRE 429 (445)
Q Consensus 418 ~~~k~v~~~~~~ 429 (445)
++.|+|++....
T Consensus 480 ~~~k~v~~~~~~ 491 (503)
T 3iwj_A 480 LSVKQVTQYISE 491 (503)
T ss_dssp EEEEEEEEECCS
T ss_pred hCeEEEEEeCCC
Confidence 999999987643
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-87 Score=702.31 Aligned_cols=397 Identities=29% Similarity=0.440 Sum_probs=373.2
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHHHHHHHHHHHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAY--ETWSKTSIITRQQVLFRLQNIIKA 104 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 104 (445)
...++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 456899999999988888999999999 99999999999999999999999999 889999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 105 NMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
++++|++++++|+|||..+++.|+..+++.++|+++..+...++..+....+...++.++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999889999999999999888777665554222456688999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 678899999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++
T Consensus 261 a~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRL-LVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp HTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred HhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEE-EEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e---------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K--------------------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~--------------------------------------- 379 (445)
++++||++++++++++.++|++++++||++++||... .
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 419 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence 9999999999999999999999999999999998531 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|++
T Consensus 420 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-TPELPIGGYKKSGLG--RELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSTTHHHHHTEEEEEEEE
T ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEEEE
Confidence 999987654 578999999999999 6799999999999999998
Q ss_pred ecc
Q psy10608 426 LWR 428 (445)
Q Consensus 426 ~~~ 428 (445)
...
T Consensus 497 ~~~ 499 (528)
T 3u4j_A 497 TLG 499 (528)
T ss_dssp ESS
T ss_pred eCC
Confidence 764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-87 Score=701.14 Aligned_cols=394 Identities=28% Similarity=0.441 Sum_probs=367.6
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|+++++.|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876678899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCcccccc---CCCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGV---AKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
+|++++++|+|||+.+++ .|+..+++.++||++..+.+.++..+.. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 7999999999999988877766554421 222356899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+++++|+.||+|++|+||||+++|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 45788999999999999999999999999999
Q ss_pred hh-cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 263 aa-~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
++ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||+
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRL-FVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEE-EEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99 8999999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e-------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~------------------------------------- 379 (445)
++++++|||+++++++++.++|++++++||++++||... .
T Consensus 356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~ 435 (517)
T 2o2p_A 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDV 435 (517)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCH
Confidence 999999999999999999999999999999999998531 0
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||++... .+.+||||+|+||+| +++|++||++|++.|+
T Consensus 436 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~~l~~~~~~k~ 512 (517)
T 2o2p_A 436 DAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT-DVAAPFGGFKQSGFG--KDLGEAALNEYLRIKT 512 (517)
T ss_dssp HHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCCGGGEEC--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC-CCCCCcCCcCcCCcC--ccChHHHHHHhCCceE
Confidence 999986544 468999999999999 6799999999999999
Q ss_pred EEeec
Q psy10608 423 VTQLW 427 (445)
Q Consensus 423 v~~~~ 427 (445)
|+++|
T Consensus 513 v~~~~ 517 (517)
T 2o2p_A 513 VTFEY 517 (517)
T ss_dssp EEEEC
T ss_pred EEeeC
Confidence 98754
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-87 Score=698.59 Aligned_cols=395 Identities=28% Similarity=0.447 Sum_probs=367.6
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999998878899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccC-C----CCceeEEEecCCeEEEECCCCcchhhh
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA-K----DMDIHSYRVPLGVTAGITPFNFPAMIP 182 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~I~p~N~P~~~~ 182 (445)
+|++++++|+|||..+++.|+..+++.++||++..+...++..+... + +...++.++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999887766665443211 2 345688999999999999999999999
Q ss_pred HhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 183 LWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 183 ~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
++++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 249 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 5678899999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 262 ~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.
T Consensus 250 ~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~ 326 (505)
T 3prl_A 250 KAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRV-FVQDSVADQLVANIKELVEQLTVGSPE 326 (505)
T ss_dssp HCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEE-EEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceE-EEeHHHHHHHHHHHHHHHHhcccCCCC
Confidence 987 89999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------- 379 (445)
+++++||++++++++++.++|++++++||++++||....
T Consensus 327 -~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~ 405 (505)
T 3prl_A 327 -DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAIS 405 (505)
T ss_dssp -TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred -CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999985210
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|+||+| +++|++||++||+.|+|++++
T Consensus 406 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~G--r~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 406 LSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG--VQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp HHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCC--cCccHHHHHHhhceEEEEEeC
Confidence 9999876534578999999999999 679999999999999999876
Q ss_pred c
Q psy10608 428 R 428 (445)
Q Consensus 428 ~ 428 (445)
.
T Consensus 484 ~ 484 (505)
T 3prl_A 484 A 484 (505)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-87 Score=698.45 Aligned_cols=396 Identities=30% Similarity=0.461 Sum_probs=370.0
Q ss_pred cccceeecCEeeeCCCCCe-EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 28 ATTKLYIDGKFVESKATDW-IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~-~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4467899999998777778 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
++|++++++|+|||..+++.|+..+++.++||++..+...++..+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988877666544422 34467889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 256 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT 256 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999448889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|.++++++++|||.+++++
T Consensus 257 ~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 335 (503)
T 1a4s_A 257 VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRV-FVQREIMPQFLEEVVKRTKAIVVGDPLLTETR 335 (503)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred CCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEehHHHHHHHHHHHHHHHhcCCCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999 7777 69999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------e------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------K------------------------------------ 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------~------------------------------------ 379 (445)
+|||+++++++++.++|++++++|+++++||... .
T Consensus 336 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (503)
T 1a4s_A 336 MGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415 (503)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHH
Confidence 9999999999999999999999999999988531 1
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... .+.+||||+|+||+| +++|++||++|++.|+|
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~k~v 492 (503)
T 1a4s_A 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS-PVEVPFGGYKMSGFG--RENGQATVDYYSQLKTV 492 (503)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSTTGGGGGSEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhcCceEE
Confidence 999987654 467999999999999 67999999999999999
Q ss_pred Eeecc
Q psy10608 424 TQLWR 428 (445)
Q Consensus 424 ~~~~~ 428 (445)
++++.
T Consensus 493 ~~~~~ 497 (503)
T 1a4s_A 493 IVEMG 497 (503)
T ss_dssp EECCS
T ss_pred EEccC
Confidence 98653
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-87 Score=695.23 Aligned_cols=402 Identities=45% Similarity=0.789 Sum_probs=372.3
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++|++++.+++.++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 84 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 163 (486)
T 1t90_A 84 ELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFP 163 (486)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999877776665443222345668899999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+.+.++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 164 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~ 243 (486)
T 1t90_A 164 MAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENL 243 (486)
T ss_dssp HHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccce-EEEecc-cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALST-VIFVGE-AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~r-vi~V~~-~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| + +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 244 ~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv-~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~ 322 (486)
T 1t90_A 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVT-VEEGIADEFMAKLQEKVADIKIGNGLDDGVFL 322 (486)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEE-EEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCB
T ss_pred CcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeE-EecCCHHHHHHHHHHHHHhcccCCCCccCCcc
Confidence 999999999999999999999999999999999999999999999 6 7777 799999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------------e---------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------------K--------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------------~--------------------------------- 379 (445)
||++++++++++.++|++++++|+++++||... .
T Consensus 323 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~a 402 (486)
T 1t90_A 323 GPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIA 402 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999998510 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccc
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRE 429 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~ 429 (445)
|+||++.....+.+||||+|+||+|..|++|++|+++|++.|+|+.++..
T Consensus 403 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~~ 482 (486)
T 1t90_A 403 NKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPA 482 (486)
T ss_dssp HHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECCC
T ss_pred hCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecCC
Confidence 99998654444679999999999995456999999999999999987643
Q ss_pred c
Q psy10608 430 S 430 (445)
Q Consensus 430 ~ 430 (445)
|
T Consensus 483 ~ 483 (486)
T 1t90_A 483 P 483 (486)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-87 Score=695.19 Aligned_cols=394 Identities=31% Similarity=0.483 Sum_probs=368.2
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 106 MKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
+++|++++++|+|||..++. .|+..+++.++||++..+.+.++..+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence 99999999999999999875 599999999999998877776654442 3344568899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~a 258 (501)
T 1bxs_A 179 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 258 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 667899999999999999999999999999999
Q ss_pred h-cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 264 A-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 264 a-~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
+ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.|
T Consensus 259 a~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~ 337 (501)
T 1bxs_A 259 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL-FVEESIYDEFVRRSVERAKKYVLGNPLT 337 (501)
T ss_dssp HHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEE-EEEHHHHHHHHHHHHHHHTCCCBSCTTS
T ss_pred hhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEE-EEchhHHHHHHHHHHHHHHhcCCCCCcc
Confidence 9 9999999999999999999999999999999999999999999999999 7777 6999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e--------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K-------------------------------------- 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~-------------------------------------- 379 (445)
+++++|||+++++++++.++|++++++|+++++||... .
T Consensus 338 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 417 (501)
T 1bxs_A 338 PGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDV 417 (501)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999998631 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|++
T Consensus 418 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 418 IKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-CCCCCCCCcCcCCcC--ccchHHHHHHhhCeeEEEE
Confidence 999987544 478999999999999 6799999999999999987
Q ss_pred ec
Q psy10608 426 LW 427 (445)
Q Consensus 426 ~~ 427 (445)
.+
T Consensus 495 ~~ 496 (501)
T 1bxs_A 495 KI 496 (501)
T ss_dssp EC
T ss_pred cc
Confidence 64
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-87 Score=693.56 Aligned_cols=394 Identities=29% Similarity=0.463 Sum_probs=370.7
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44689999999988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||+.......+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998877666655443334566789999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999 5678999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
+|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 327 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRL-YVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTI 327 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCB
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEE-EEeHHHHHHHHHHHHHHHHhccCCCCccCcCcc
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e-----------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K----------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~----------------------------------------- 379 (445)
||++++++++++.++|++++++||++++||... .
T Consensus 328 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 407 (481)
T 3jz4_A 328 GPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAN 407 (481)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHh
Confidence 999999999999999999999999999999531 0
Q ss_pred -----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||++... .+.+||||+|+||+| +++|++|+++||+.|+|++.
T Consensus 408 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 408 DTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS-NEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC-CSSSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred cCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCcCCcccCcCC--CCchHHHHHHhhceeEEEEe
Confidence 999987654 478999999999999 67999999999999999864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-87 Score=701.25 Aligned_cols=393 Identities=31% Similarity=0.467 Sum_probs=370.1
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCccc----ccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTI----MQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
+|++++++|+|||..++ |+..+++.++||++..+. +.++..+ ...+. .++.++|+|||++|+|||||+.+.+
T Consensus 93 ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~-~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~ 168 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIP-LGGDF-AYTKRVPLGVCVGIGAWNYPQQIAC 168 (517)
T ss_dssp HHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEE-CSSSE-EEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcccc-cCCCc-ceEEEcCccEEEEECCCcchHHHHH
Confidence 99999999999999998 999999999999988776 6666554 23344 8899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 169 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 169 WKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++
T Consensus 249 a~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 327 (517)
T 3r31_A 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRV-FVQKKAKARFLENLKRRTEAMILGDPLDY 327 (517)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEE-EEEGGGHHHHHHHHHHHHHHCCBCCTTST
T ss_pred hcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceE-EEeHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-c-----ce------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR-N-----LK------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~-~-----~~------------------------------------ 379 (445)
++++|||+++++++++.++|++++++||++++||. . ..
T Consensus 328 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 407 (517)
T 3r31_A 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDED 407 (517)
T ss_dssp TCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHH
T ss_pred CCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 99999999999999999999999999999999983 0 00
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|
T Consensus 408 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v 484 (517)
T 3r31_A 408 EVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLC-PVEIPFGGSKQSGFG--RENSAAALEHYSELKTV 484 (517)
T ss_dssp HHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCC-CTTSCBCCEETTEEC--CBSTGGGGGGSEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEE
Confidence 999997654 478999999999999 67999999999999999
Q ss_pred Eeecc
Q psy10608 424 TQLWR 428 (445)
Q Consensus 424 ~~~~~ 428 (445)
++...
T Consensus 485 ~~~~~ 489 (517)
T 3r31_A 485 YVSTG 489 (517)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98664
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-86 Score=693.55 Aligned_cols=394 Identities=25% Similarity=0.395 Sum_probs=369.3
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++ .|+..+++.++||++..+.+.++..+ ...+...++.++|+|||++|+|||||+.+.+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETR-TGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEE-EETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999998 89999999999999988877766544 222345689999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+.+.+++|+.||+||+|+||||+.+|+.|++.+++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999977889999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 266 ~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 325 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRI-LAPRSRYDEIVAAVTNFVTALPVGPPSDPAA 325 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEGGGHHHHHHHHHHHHHHSCBCCTTCTTC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEE-EEcccHHHHHHHHHHHHHHhcCCCCCccCCC
Confidence 999999999999999999999999999999999999999999999999 7777 6999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e---------------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K--------------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~--------------------------------------- 379 (445)
++|||+++++++++.++|++++++|+++++||... .
T Consensus 326 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 405 (495)
T 3b4w_A 326 QIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAI 405 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHH
Confidence 99999999999999999999999999999988520 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++. . .+.+||||+|+||+| +++|++||++|++.|+|++.
T Consensus 406 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~-~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 406 AIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-F-DPGSPFGGYKNSGIG--RENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp HHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-C-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEECC
T ss_pred HHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-C-CCCCCCCCCCCCCcC--ccchHHHHHHhcceeEEEEc
Confidence 9999876 4 478999999999999 67999999999999999976
Q ss_pred cc
Q psy10608 427 WR 428 (445)
Q Consensus 427 ~~ 428 (445)
+.
T Consensus 482 ~~ 483 (495)
T 3b4w_A 482 MG 483 (495)
T ss_dssp TT
T ss_pred cC
Confidence 53
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-86 Score=693.47 Aligned_cols=395 Identities=29% Similarity=0.460 Sum_probs=370.1
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||++..+...++.++....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999887776665442233456788999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.+++++
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l 265 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHL 265 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999994 678899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++
T Consensus 266 ~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 344 (515)
T 2d4e_A 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRL-LVEEKIFEDFVGKVVERARAIRVGHPLDPETEV 344 (515)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEE-EEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSB
T ss_pred CceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEehhHHHHHHHHHHHHHhhcccCCcccccCcc
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-c---------e------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRN-L---------K------------------------------------ 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-~---------~------------------------------------ 379 (445)
|||+++++++++.++|++++++||++++||.. . .
T Consensus 345 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~~~~~~i~~eEiFGPVl~v~~~~~~d 424 (515)
T 2d4e_A 345 GPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEE 424 (515)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEECCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeCCCCChhhhccccCCceEEEeeCCHH
Confidence 99999999999999999999999999998852 0 0
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|++.|+|
T Consensus 425 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~K~v 501 (515)
T 2d4e_A 425 EALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVR-HLPTPFGGVKGSGDR--REGGTYALDFYTDLKTI 501 (515)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCC-CTTSCBCCSGGGBCS--CBSHHHHHHHHEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhCceeEE
Confidence 999986543 478999999999999 67999999999999999
Q ss_pred Eeec
Q psy10608 424 TQLW 427 (445)
Q Consensus 424 ~~~~ 427 (445)
++.+
T Consensus 502 ~~~~ 505 (515)
T 2d4e_A 502 ALPL 505 (515)
T ss_dssp EEES
T ss_pred EEcC
Confidence 9875
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-86 Score=689.95 Aligned_cols=394 Identities=28% Similarity=0.426 Sum_probs=368.2
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASE 85 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||++..+...+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 165 (479)
T 2imp_A 86 ISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAP 165 (479)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766655442223446789999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 166 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~ 245 (479)
T 2imp_A 166 ALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNI 245 (479)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999995 567899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC-CCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV-PGTD 344 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~-~~~~ 344 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.+ ++++
T Consensus 246 ~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 324 (479)
T 2imp_A 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERV-YVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIA 324 (479)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCS
T ss_pred CcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEE-EEehhhHHHHHHHHHHHHHhcccCCccccCCCc
Confidence 9999999999999999999999999999999999999999999999 7777 6999999999999999999999 9999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e------------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K------------------------------------------ 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~------------------------------------------ 379 (445)
+|||+++.+++++.++|++++++|+++++||... .
T Consensus 325 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~a 404 (479)
T 2imp_A 325 MGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMA 404 (479)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHH
Confidence 9999999999999999999999999999988631 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++||++|++.|+|+++
T Consensus 405 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 405 NDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCEETTEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred hcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC-CCCCCCCCCCCCCCC--CCchHHHHHHhcCeeEEEec
Confidence 999987655 478999999999999 67999999999999999864
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-86 Score=690.66 Aligned_cols=394 Identities=26% Similarity=0.403 Sum_probs=366.8
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 21 ~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 21 LMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp -CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34457899999998766 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++. |+..+++.++||++..+...++..+...++...++.++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 99999999999999999998 99999999999998877766655442213445688999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 99999999999 6678999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.+++
T Consensus 259 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRI-YAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEE-EEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEE-EecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-cc--e---------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEG-ATLLLDGR-NL--K--------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~G-a~~~~GG~-~~--~--------------------------------------- 379 (445)
+++|||+++++++++.++|++++++| +++++||. .. .
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 417 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence 99999999999999999999999999 99999986 21 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++||++|++.|+|+++
T Consensus 418 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 418 NWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCCcCcCC--ccchHHHHHHhhCeEEEEec
Confidence 999986544 478999999999999 67999999999999999864
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-86 Score=690.57 Aligned_cols=389 Identities=28% Similarity=0.403 Sum_probs=360.3
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEE-EecCCeEEEECCCCcchhhhHhH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSY-RVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+|++++++|+|||+.+++ .|+..+++.++|++............ ..+...++. ++|+|||++|+|||||+.+.+++
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 999999999999999999 79999999999998754433221111 123446778 99999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5688999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.|++
T Consensus 262 ~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 262 NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRM-LVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 99999999999999999999999 9999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-c-------ce-----------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGR-N-------LK----------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~-~-------~~----------------------------------- 379 (445)
+++|||+++++++++.++|++++++||++++||. . ..
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 419 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE 419 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence 9999999999999999999999999999999993 1 00
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||. .. ..+.+||||+|+||+| +++|++||++||+.|+|+
T Consensus 420 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 420 AVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HE-LPGGSYFGGVKFSGRA--REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CC-CCTTCCBCCSGGGCCC--CBSHHHHHHTTEEEEEES
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CC-CCCCCCcCCcCcCcCC--ccchHHHHHHhcceeEEE
Confidence 99994 33 3478999999999999 679999999999999985
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-86 Score=691.12 Aligned_cols=392 Identities=29% Similarity=0.411 Sum_probs=367.1
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 589999999887778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..++. .|+..+++.++||++..+...++..+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999875 599999999999998877666654442 334456889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh-
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA- 264 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa- 264 (445)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999 6778999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.|++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 338 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRT-FVQEDIYDEFVERSVARAKSRVVGNPFDSK 338 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEE-EEehhHHHHHHHHHHHHHHhCcCCCccccc
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e----------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K---------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~---------------------------------------- 379 (445)
+++|||+++++++++.++|++++++|+++++||... .
T Consensus 339 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 418 (500)
T 1o04_A 339 TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVG 418 (500)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHH
Confidence 999999999999999999999999999999998631 0
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|++.+
T Consensus 419 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 419 RANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMSGSG--RELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGGEES--CBSTGGGGGGGEEEEEEEEEC
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhcceEEEEEec
Confidence 999987544 478999999999999 679999999999999998764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-86 Score=693.68 Aligned_cols=394 Identities=29% Similarity=0.426 Sum_probs=367.9
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999997 568899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccC-cccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI-PTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++.|+..+++.++||++. .+++.++..+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 192 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILS-RPGEQNRYFYTPMGVTVTISPWNFALAIMVGT 192 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCC-CTTEEEEEEEEECCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-cCCcceeeecCCCcEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999988 66676665542 23567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 193 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 272 (538)
T 3qan_A 193 AVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272 (538)
T ss_dssp HHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999999
Q ss_pred cC------CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcccc
Q psy10608 265 KN------GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 265 ~~------~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG 336 (445)
++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|
T Consensus 273 ~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~vG 351 (538)
T 3qan_A 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRA-VIHKDVYDEVLEKTVALAKNLTVG 351 (538)
T ss_dssp SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEE-EEETTTHHHHHHHHHHHHTTCCBS
T ss_pred hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCcee-EEehHHHHHHHHHHHHHHHhccCC
Confidence 88 99999999999999999999999999999999999999999999999 7777 699999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------- 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------- 379 (445)
||.++++++||++++++++++.++|++++++| ++++||....
T Consensus 352 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 430 (538)
T 3qan_A 352 DPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAND 430 (538)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCC
Confidence 99999999999999999999999999999999 9999985310
Q ss_pred --------------------------------------EEEe-CCCCCCCCCCccCCCCCCccC-CCCcchHHHHHHhhe
Q psy10608 380 --------------------------------------VGIN-VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTE 419 (445)
Q Consensus 380 --------------------------------------V~iN-~~~~~~~~~~pfGG~k~SG~G-~~~~~g~~~l~~~~~ 419 (445)
|+|| .++....+.+||||+|+||+| + ++|++||++|++
T Consensus 431 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~--~~G~~gl~~ft~ 508 (538)
T 3qan_A 431 FDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSK--AGGPDYLALHMQ 508 (538)
T ss_dssp HHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCC--BTSTTTGGGGEE
T ss_pred HHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcc--cccHHHHHHhhC
Confidence 9999 555443578999999999999 6 599999999999
Q ss_pred eEEEEeecc
Q psy10608 420 TKTVTQLWR 428 (445)
Q Consensus 420 ~k~v~~~~~ 428 (445)
.|+|++++.
T Consensus 509 ~k~v~~~~~ 517 (538)
T 3qan_A 509 AKTVSEMYA 517 (538)
T ss_dssp EEEEEEEC-
T ss_pred eEEEEEecC
Confidence 999998764
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=688.02 Aligned_cols=399 Identities=26% Similarity=0.395 Sum_probs=357.1
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 45668999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccccc-CCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV-AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++.|+..+++.++|++...+...+ ..+.. .++...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999998877666 44422 23467889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHH-HHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGAC-MMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++||++||+||+|||+.+|.++ .+|++++.++|+|+|+||+|+|+ .+.++.|+.||+||+|+||||+++|+.|++.+
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a 248 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999 99999999999999999999995 78899999999999999999999999999999
Q ss_pred hc--CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 264 AK--NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 264 a~--~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.
T Consensus 249 a~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~ 327 (508)
T 3r64_A 249 INGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRV-IVDAAVHDEFLEKFVEAVKNIPTGDPS 327 (508)
T ss_dssp HSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEE-EEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred hcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEE-EEehhHHHHHHHHHHHHHHhccCCCCc
Confidence 98 899999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------- 379 (445)
++++++|||+++++++++.++|++++++|+++++||....
T Consensus 328 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (508)
T 3r64_A 328 AEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAE 407 (508)
T ss_dssp SSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999999985310
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|+||+| +++|++|+++||+.|+|++++
T Consensus 408 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~G--r~~G~~~l~~ft~~k~v~~~~ 485 (508)
T 3r64_A 408 LANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDRWIGIKR 485 (508)
T ss_dssp HHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----------------------CCCHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCC--cCccHHHHHHhhceEEEEEec
Confidence 9999876443578999999999999 569999999999999999876
Q ss_pred cc
Q psy10608 428 RE 429 (445)
Q Consensus 428 ~~ 429 (445)
.+
T Consensus 486 ~~ 487 (508)
T 3r64_A 486 SA 487 (508)
T ss_dssp CS
T ss_pred cc
Confidence 43
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-86 Score=686.72 Aligned_cols=398 Identities=25% Similarity=0.379 Sum_probs=350.9
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45568999999998888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccccc-CCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV-AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||+.+++.|+..+++.++|+++..+++.+...+.. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877776654422 23466789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHH-HHHHHHHHHcCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGAC-MMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++||++||+||+|||+.+|.++ .+|++++.++|+|+|+||+|+|+. +.++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~a 243 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIA 243 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999999965 5889999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.|+
T Consensus 244 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~~~~~ 322 (485)
T 4dng_A 244 GRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRI-IVHQDVYDEFVEKFTARVKQLPYGDQTDP 322 (485)
T ss_dssp HHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEE-EEEHHHHHHHHHHHHHHHHHCCBSCTTST
T ss_pred hhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEE-EEeHHHHHHHHHHHHHHHHhccCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++++||++++.+++++.++|++++++|+++++||....
T Consensus 323 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~a 402 (485)
T 4dng_A 323 KTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMA 402 (485)
T ss_dssp TCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999985200
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|+||+| +++|++|+++||+.|+|++++
T Consensus 403 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 403 NDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------------CHHHHHHHEEEEEEEEEC
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC--ccchHHHHHHhhceEEEEEec
Confidence 9999876444578999999999999 569999999999999999875
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=684.83 Aligned_cols=393 Identities=29% Similarity=0.433 Sum_probs=367.0
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|++
T Consensus 11 ~~~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 11 LRTDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CCCSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 335789999999764 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++||++..+.+.++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVG 168 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999887777666544222345678999999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEe---C-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH---G-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~---g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+ | +.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 248 (487)
T 2w8n_A 169 AALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHA 248 (487)
T ss_dssp HHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 8 567889999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHh-ccccCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEA-LKVSAGNV 340 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~-l~vG~p~~ 340 (445)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.+++++ +++|||.+
T Consensus 249 a~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~~G~p~~ 327 (487)
T 2w8n_A 249 ANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQF-LVQRGIHDAFVKAFAEAMKKNLRVGNGFE 327 (487)
T ss_dssp HTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEE-EEEHHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEE-EEcccHHHHHHHHHHHHHHhhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999 99999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc----c-e------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN----L-K------------------------------------ 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~----~-~------------------------------------ 379 (445)
+++++|||+++++++++.++|++++++|+++++||.. . .
T Consensus 328 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eA 407 (487)
T 2w8n_A 328 EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEA 407 (487)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHH
Confidence 9999999999999999999999999999999998752 1 1
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|++.|+|++
T Consensus 408 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G--~~~G~~~l~~f~~~k~v~~ 484 (487)
T 2w8n_A 408 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS-SVECPFGGVKQSGLG--REGSKYGIDEYLELKYVCY 484 (487)
T ss_dssp HHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC-CTTSCBCCSGGGEES--CBSTTTGGGGGEEEEEEEE
T ss_pred HHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcC--CCchHHHHHHhcCccEEEE
Confidence 999987654 367999999999999 6799999999999999986
Q ss_pred e
Q psy10608 426 L 426 (445)
Q Consensus 426 ~ 426 (445)
+
T Consensus 485 ~ 485 (487)
T 2w8n_A 485 G 485 (487)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-85 Score=683.96 Aligned_cols=395 Identities=23% Similarity=0.356 Sum_probs=364.9
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 99 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQ 99 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999994 56789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++|+++..+.+.++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 100 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (500)
T 2j6l_A 100 VLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNA 179 (500)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHH
Confidence 99999999999999999889999999999999887766665444222344467889999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHH----HcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLT----QAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+||++||+||+|||+.+|+++..|++++. ++|+|+|+||+|+|+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 180 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~a 259 (500)
T 2j6l_A 180 IAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV 259 (500)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999988876 46999999999999778899999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|||.++
T Consensus 260 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 338 (500)
T 2j6l_A 260 QERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL-FIHESIHDEVVNRLKKAYAQIRVGNPWDP 338 (500)
T ss_dssp HHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred ccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEE-EEcHHHHHHHHHHHHHHhhhcccCCcccC
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------e---------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------K--------------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------~--------------------------------- 379 (445)
++++|||+++++++++.++|++++++|+++++||... .
T Consensus 339 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 418 (500)
T 2j6l_A 339 NVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVF 418 (500)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHH
T ss_pred CCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHH
Confidence 9999999999999999999999999999999998631 0
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++.....+.+||||+|+||+| +++|.+|+++|++.|+|+
T Consensus 419 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 419 AWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG--RESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSC--CEESTTGGGGGEEEEEEE
T ss_pred HHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCC--CcchHHHHHHhhceEEEE
Confidence 9999865433467899999999999 679999999999999998
Q ss_pred eec
Q psy10608 425 QLW 427 (445)
Q Consensus 425 ~~~ 427 (445)
+++
T Consensus 497 ~~~ 499 (500)
T 2j6l_A 497 INY 499 (500)
T ss_dssp EEC
T ss_pred EeC
Confidence 753
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-85 Score=680.57 Aligned_cols=387 Identities=28% Similarity=0.448 Sum_probs=354.8
Q ss_pred eeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAE 111 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 111 (445)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhh
Q psy10608 112 NITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191 (445)
Q Consensus 112 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALa 191 (445)
++++|+|||..+++.|+..+++.++||++..+.+.++..+. .+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766655442 2557789999999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHc----CCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQA----GCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
+||+||+|||+.+|.++..|++++.++ |+|+|+||+|+|+ .++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 9999999999995 566899999999999999999999999999887
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 313 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMI-LVDESIADKFIEMFVNKAKVLNVGNPLDEKTD 313 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEE-EEeHHHHHHHHHHHHHHHHhcccCCCCcCCCC
Confidence 89999999999999999999999999999999999999999999999 7777 69999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------e------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------K------------------------------------ 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------~------------------------------------ 379 (445)
+|||+++++++++.++|++++++||++++||... .
T Consensus 314 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~deAi~~aN~~~~ 393 (486)
T 3pqa_A 314 VGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRTNEEEMIDIANSTEY 393 (486)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECHHHHHHHHTCSSC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEEeCCCCChhhcccccccEEEEEEEcHHHHHHHHhcCCC
Confidence 9999999999999999999999999999998520 0
Q ss_pred -------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 380 -------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 380 -------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+||++..+..+.+||||+|+||+| +++|++||++||+.|+|+++..
T Consensus 394 gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G--r~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 394 GLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLG--REGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEES--CBSHHHHHHHTEEEEEEEEEC-
T ss_pred CcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCC--CCCcHHHHHHhhceEEEEEcCC
Confidence 9999875443358999999999999 6799999999999999998753
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-85 Score=677.93 Aligned_cols=390 Identities=27% Similarity=0.415 Sum_probs=361.8
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 357899999997654 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCC----Cce-eEEEecCCeEEEECCCCcchhhhH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKD----MDI-HSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
|++++++|+|||..+++.|+..+++.++||++..+...++..+...++ ... ++.++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999987766555543322223 355 899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
+++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+ .++++.|+.||++|+|+||||+++|+.|++.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999995 5688999999999999999999999999998
Q ss_pred hhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 263 aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
++ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.+
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRV-LVMESVADELVEKIREKVLALTIGNPED 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEE-EEEHHHHHHHHHHHHHHHHTSCBSCGGG
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEE-EEehhHHHHHHHHHHHHHHhccCCCccc
Confidence 87 89999999999999999999999999999999999999999999999 7777 6999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--ce---------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN--LK--------------------------------------- 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--~~--------------------------------------- 379 (445)
++++|||+++++++++.++|++++++|+++++||.. ..
T Consensus 319 -~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~ 397 (475)
T 1euh_A 319 -DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 397 (475)
T ss_dssp -TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHH
T ss_pred -cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999851 10
Q ss_pred -------------------------------EEEeC-CCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 -------------------------------VGINV-PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 -------------------------------V~iN~-~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||+ +... .+.+||||+|+||+| +++|++|+++|++.|+|++.+
T Consensus 398 an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 398 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAG--IQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEES--CBSHHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCCCCcC--CCccHHHHHHhCCeeEEEEec
Confidence 99998 6544 478999999999999 679999999999999998764
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-84 Score=678.60 Aligned_cols=391 Identities=25% Similarity=0.361 Sum_probs=364.0
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
.+++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 44689999999764 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccccc--CC--CCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV--AK--DMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
+|++++++|+|||..+++.|+..+++.++||++..+...++..+.. .. +...++.++|+|||++|+|||||+.+.+
T Consensus 96 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 175 (501)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999999998877766654421 12 2357899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 176 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~a 255 (501)
T 1uxt_A 176 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG 255 (501)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999668889999999999999999999999999988
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|.++++++++|||.|+
T Consensus 256 a--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 332 (501)
T 1uxt_A 256 G--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV-LAERPVYGKLVEEVAKRLSSLRVGDPRDP 332 (501)
T ss_dssp C--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEHHHHHHHHHHHHHHHHTCCBSCTTST
T ss_pred C--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEE-EeccchHHHHHHHHHHHHHhccCCCcccc
Confidence 7 89999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc--c------------c---e-------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR--N------------L---K------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~--~------------~---~------------------------- 379 (445)
++++|||+++++++++.++|++++++||++++||. . . .
T Consensus 333 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deA 412 (501)
T 1uxt_A 333 TVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQA 412 (501)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999863 1 1 1
Q ss_pred ----------------------------------EEEeCC-CCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ----------------------------------VGINVP-IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ----------------------------------V~iN~~-~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++ +.. .+.+||||+|+||+| +++|++||++|++.|+|+
T Consensus 413 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~k~v~ 489 (501)
T 1uxt_A 413 IELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHG-IGYYPFGGRKKSGVF--REGIGYAVEAVTAYKTIV 489 (501)
T ss_dssp HHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCT-TSSSCBCCEETTEES--CBSTTTTHHHHEEEEEEE
T ss_pred HHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCC-CCCCCCCCcCCCCCC--ccChHHHHHHhCceeEEE
Confidence 999987 433 478999999999999 679999999999999999
Q ss_pred eec
Q psy10608 425 QLW 427 (445)
Q Consensus 425 ~~~ 427 (445)
+.+
T Consensus 490 ~~~ 492 (501)
T 1uxt_A 490 FNY 492 (501)
T ss_dssp EEC
T ss_pred Eec
Confidence 875
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-84 Score=678.89 Aligned_cols=392 Identities=30% Similarity=0.440 Sum_probs=361.4
Q ss_pred ccceeecCEeeeCCCCCeEEeecCC-CCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~-~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999964 5689999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccc-ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA-GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..+++.|+..+++.++||++..+.+.+...+ ...++...++.++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 194 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999877666554322 12234456889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh-
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA- 264 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa- 264 (445)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+++++|+.||+|++|+||||+.+|+.|++.++
T Consensus 195 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 274 (516)
T 1uzb_A 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 5678999999999999999999999999999998
Q ss_pred -----cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccC
Q psy10608 265 -----KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSA 337 (445)
Q Consensus 265 -----~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~ 337 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++||
T Consensus 275 ~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~ 353 (516)
T 1uzb_A 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL-ILTQGAYEPVLERVLKRAERLSVGP 353 (516)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred ccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEE-EEchHHHHHHHHHHHHHHHhccCCC
Confidence 7899999999999999999999999999999999999999999999999 7777 6999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e-----------------------------------
Q psy10608 338 GNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K----------------------------------- 379 (445)
Q Consensus 338 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~----------------------------------- 379 (445)
| ++++++|||+++.+++++.++|++++++| ++++||... .
T Consensus 354 p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 431 (516)
T 1uzb_A 354 A-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431 (516)
T ss_dssp G-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred C-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCH
Confidence 9 99999999999999999999999999999 899998631 0
Q ss_pred -------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 -------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
|+||++... ..+.+||||+|.||+|+ +++|++++++|++.|
T Consensus 432 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~f~~~k 510 (516)
T 1uzb_A 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA-KTGALDYLRLFLEMK 510 (516)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC-CBTSHHHHHTTEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC-ccchHHHHHHcCCee
Confidence 999985432 34679999999999995 368999999999999
Q ss_pred EEEee
Q psy10608 422 TVTQL 426 (445)
Q Consensus 422 ~v~~~ 426 (445)
+|+++
T Consensus 511 ~v~~~ 515 (516)
T 1uzb_A 511 AVAER 515 (516)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99864
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-84 Score=674.02 Aligned_cols=377 Identities=23% Similarity=0.322 Sum_probs=353.8
Q ss_pred eEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh
Q psy10608 46 WIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE 125 (445)
Q Consensus 46 ~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 125 (445)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCCh
Q psy10608 126 GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205 (445)
Q Consensus 126 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p 205 (445)
.|+..+++.++||++..+...+...+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKL-NSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEE-CCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeec-cCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 99999999999999887666555443 22456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 206 GACMMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 206 ~~~~~l~~~l~~aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
.++..|++++.++|+|+|+||+|+|+. +.++ |+.||+||+|+||||+++|+.|++.+++++||+++|||||||+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 999999999999999999999999965 4566 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~ 362 (445)
|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++++++|||+++++++++.++|+
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~ 321 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRI-IVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVK 321 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 7777 69999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCccce---------------------------------------------------------------
Q psy10608 363 SGVDEGATLLLDGRNLK--------------------------------------------------------------- 379 (445)
Q Consensus 363 ~a~~~Ga~~~~GG~~~~--------------------------------------------------------------- 379 (445)
+++++||++++||....
T Consensus 322 ~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 401 (484)
T 3ros_A 322 EAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDR 401 (484)
T ss_dssp HHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHH
T ss_pred HHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 99999999999986310
Q ss_pred ------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 380 ------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 380 ------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|+++..
T Consensus 402 a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 402 AKKVSAQIETGMTVINGRWIT-SGELPFGGIKKSGYG--RELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHHHHSCSSCCEETSCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTCEEEEEEECGG
T ss_pred HHHHHHhCccceEEECCCCCC-CCCCCcCCcCcccCC--cCchHHHHHHhheeEEEEECCC
Confidence 999997654 478999999999999 6799999999999999998653
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-84 Score=674.37 Aligned_cols=388 Identities=30% Similarity=0.470 Sum_probs=342.2
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 85 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKD 85 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 35689999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..++ ..|+..+++.++|+++..+...+... ....++.++|+|||++|+|||||+.+.++++
T Consensus 86 ~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 86 DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 67999999999999987665544321 2357889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.+++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~ 240 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK 240 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 56889999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 266 ~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++
T Consensus 241 ~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 241 DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRV-LVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEE-EEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999 7777 6999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--------c----e--------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRN--------L----K-------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--------~----~-------------------------------- 379 (445)
++|||+++++++++.++|++++++|+++++||.. . .
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eA 399 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEA 399 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHH
Confidence 9999999999999999999999999999999821 0 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||+ .. ..+.+||||+|+||+| +++|++||++||+.|+|+.
T Consensus 400 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 400 IQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AG-RKPDLPFGGYKQSGLG--REWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC-------------------------CCGGGEEEEEEET
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CC-CCCCCCcCCcCcCcCC--ccchHHHHHHhcCeEEEEE
Confidence 99998 33 3467899999999999 6799999999999999974
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-82 Score=658.87 Aligned_cols=378 Identities=25% Similarity=0.370 Sum_probs=355.0
Q ss_pred CCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHh
Q psy10608 44 TDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLAD 123 (445)
Q Consensus 44 ~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 123 (445)
..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCC
Q psy10608 124 AEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203 (445)
Q Consensus 124 a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~ 203 (445)
++.|+..+++.++|+++..+...+.. +....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~ 164 (462)
T 3etf_A 86 ARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPN 164 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 99999999999999998776655543 21234556789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEec
Q psy10608 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIM 283 (445)
Q Consensus 204 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~ 283 (445)
+|.++.+|++++.++|+|+|+||+|+|+.+.+..|+.||+|++|+||||+++|+.|++.++++++|+++|||||||+||+
T Consensus 165 tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~ 244 (462)
T 3etf_A 165 VTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244 (462)
T ss_dssp CHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEEC
T ss_pred CcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEEC
Confidence 99999999999999999999999999988888999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy10608 284 SDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLI 361 (445)
Q Consensus 284 ~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i 361 (445)
+|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++|||++.++++++.++|
T Consensus 245 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 323 (462)
T 3etf_A 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRF-IVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323 (462)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccCCcEE-EEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999 7777 6999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCCccce--------------------------------------------------------------
Q psy10608 362 QSGVDEGATLLLDGRNLK-------------------------------------------------------------- 379 (445)
Q Consensus 362 ~~a~~~Ga~~~~GG~~~~-------------------------------------------------------------- 379 (445)
++++++|+++++||....
T Consensus 324 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~ 403 (462)
T 3etf_A 324 QASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403 (462)
T ss_dssp HHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred HHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 999999999999986210
Q ss_pred -------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+|+++
T Consensus 404 ~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G--~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 404 LAAEMAARLECGGVFINGYSAS-DARVAFGGVKKSGFG--RELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHHHHCCSSEEEESSCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHhCCcceEEECCCCCC-CCCCCcCCcCCCCCC--ccchHHHHHHHhceeEEEEe
Confidence 999987644 478999999999999 67999999999999999864
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-81 Score=652.38 Aligned_cols=386 Identities=25% Similarity=0.345 Sum_probs=357.0
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999864 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||..+++.|+..+++.++|++...+...+...+ ...+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEE-EETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999998876665554433 12234567779999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcE
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~ 270 (445)
++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+.+.++.|+.||+||+|+||||+++|+.|++.++++++|+
T Consensus 165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v 244 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSE
T ss_pred HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999998
Q ss_pred -EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHhccccC-CCCCCCCC
Q psy10608 271 -QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEALKVSA-GNVPGTDL 345 (445)
Q Consensus 271 -~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~l~vG~-p~~~~~~~ 345 (445)
++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+ |.++++++
T Consensus 245 ~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~ 323 (490)
T 3ju8_A 245 LALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRL-LVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFM 323 (490)
T ss_dssp EEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSB
T ss_pred EEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEE-EEECCccHHHHHHHHHHHHHhccCCCCCCCCcCcc
Confidence 7999999999999999999999999999999999999999999 6655 5999999999999999999 99999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------- 379 (445)
|||+++++++++.++|++++++||++++||....
T Consensus 324 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~ 403 (490)
T 3ju8_A 324 GAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANA 403 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHHhc
Confidence 9999999999999999999999999999984210
Q ss_pred ----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|.||++ ++++|++.|+|++..
T Consensus 404 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~--------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 404 TQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH--------RPSAYYAADYCAYPV 471 (490)
T ss_dssp SSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS--------CCEETTHHHHHEEEE
T ss_pred CCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh--------HHHhhheeEEEEEec
Confidence 9999876544578999999999876 378999999998654
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-81 Score=660.23 Aligned_cols=395 Identities=22% Similarity=0.268 Sum_probs=359.2
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh-
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN- 105 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~- 105 (445)
..+++||||+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 139 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPR 139 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 456899999999764 4678899998 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHH-HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 106 MKQLAENITEEQGKTLADAEGD-VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
+++|++++++|+|||+.+++.| +..+++.++|++...+.+.+........+...+.++.|+|||++|+|||||+....+
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~ 219 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL 219 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHH
Confidence 9999999999999999999887 999999999999887766553322111223355667788999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++||| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 220 ~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~a 298 (563)
T 4e3x_A 220 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQV 298 (563)
T ss_dssp HHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999 5999999999999999999999999999999999999995 56789999999999999999999999999999
Q ss_pred hcCCCc------EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc
Q psy10608 264 AKNGKR------VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV 335 (445)
Q Consensus 264 a~~~~~------~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v 335 (445)
+++++| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++
T Consensus 299 a~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv-~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 299 AQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRL-YVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEecchHHHHHHHHHHHHHhccC
Confidence 998884 99999999999999999999999999999999999999999999 7777 69999999999999999
Q ss_pred cCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEeCCccce----------------------------------
Q psy10608 336 SAG-NVPGTDLGPVISPQAKERILSLIQSGVD-EGATLLLDGRNLK---------------------------------- 379 (445)
Q Consensus 336 G~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~~~~GG~~~~---------------------------------- 379 (445)
||| .|+++++||+|++++++++.++|+++++ +||++++||....
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 457 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYV 457 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEE
Confidence 999 9999999999999999999999999996 8999999985310
Q ss_pred ----------------------------------------------EEEeCCCC-CCCCCCccCCCCCCccCCCCcchHH
Q psy10608 380 ----------------------------------------------VGINVPIP-VPLSMFSFTGSRGSFLGENHFYGKQ 412 (445)
Q Consensus 380 ----------------------------------------------V~iN~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~ 412 (445)
||||+... ...+.+||||+|+||+|. +++|++
T Consensus 458 ~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~-~~~G~~ 536 (563)
T 4e3x_A 458 YPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTND-KPGGPH 536 (563)
T ss_dssp ECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCC-CTTSTT
T ss_pred ECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCC-ccCCHH
Confidence 99998643 234679999999999985 579999
Q ss_pred HHHHhheeEEEEeec
Q psy10608 413 GFYFYTETKTVTQLW 427 (445)
Q Consensus 413 ~l~~~~~~k~v~~~~ 427 (445)
+|++|++.|+|....
T Consensus 537 ~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 537 YILRWTSPQVIKETH 551 (563)
T ss_dssp GGGGGBCCEEEEEEC
T ss_pred HHHHhCceEEEEEeC
Confidence 999999999998765
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-80 Score=642.50 Aligned_cols=382 Identities=19% Similarity=0.266 Sum_probs=350.0
Q ss_pred CCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh
Q psy10608 42 KATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL 121 (445)
Q Consensus 42 ~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 121 (445)
.+.++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HhhhHHHHHHHHHHHHHccCcccccC-ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeC
Q psy10608 122 ADAEGDVLRGLQVVEQCCSIPTIMQG-ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200 (445)
Q Consensus 122 ~~a~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKp 200 (445)
++..|+..++..+++|+........ .......+.......++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 83 -~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKp 161 (474)
T 4h7n_A 83 -ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKP 161 (474)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecc
Confidence 4567999999999998876554332 22232334455677889999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCee
Q psy10608 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHG 280 (445)
Q Consensus 201 s~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~ 280 (445)
|+.+|.++..+++++.++|+|+|++|+++|+.+.+..|+.| +++|+||||+.+|+.|++.+++++||++||||||||+
T Consensus 162 s~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~ 239 (474)
T 4h7n_A 162 SEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPA 239 (474)
T ss_dssp CTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEE
T ss_pred cccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCcc
Confidence 99999999999999999999999999999999999999976 8999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHH
Q psy10608 281 VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERIL 358 (445)
Q Consensus 281 iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~ 358 (445)
||++|||++.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 240 iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 318 (474)
T 4h7n_A 240 IVLESANLELATSAILWGAVVNTGQSCLSIERI-YVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIIN 318 (474)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHH
T ss_pred ccCchhhHHHHHHHHHhhhccCCCCceeecccc-cchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHH
Confidence 999999999999999999999999999999999 7777 6999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCccce-----------------------------------------------------------
Q psy10608 359 SLIQSGVDEGATLLLDGRNLK----------------------------------------------------------- 379 (445)
Q Consensus 359 ~~i~~a~~~Ga~~~~GG~~~~----------------------------------------------------------- 379 (445)
+++++++++|+++++||....
T Consensus 319 ~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t 398 (474)
T 4h7n_A 319 DHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFA 398 (474)
T ss_dssp HHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEEC
T ss_pred HHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEe
Confidence 999999999999999986321
Q ss_pred -----------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 380 -----------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 380 -----------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+||+.... ..+..||||+|.||+|. +++|++|+++|++.|+|+++..
T Consensus 399 ~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~-~~~G~~g~~~f~~~k~v~~~~~ 464 (474)
T 4h7n_A 399 GSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG-SRVGAAGLKRFLRKQAFLIKTN 464 (474)
T ss_dssp SSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC-CSSTTHHHHTTEEEEEEEEECS
T ss_pred CCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC-CcchHHHHHHhCeEEEEEECCC
Confidence 999986432 23578999999999984 4689999999999999998754
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-79 Score=681.57 Aligned_cols=395 Identities=31% Similarity=0.403 Sum_probs=365.2
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..++||||+|+.+ +++++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999964 57899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++||+...+.+.+.......++...++.++|+|||++|+|||||+.+.+++++
T Consensus 609 eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a 688 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMAS 688 (1026)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999887766554333223456678899999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh--
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGA-- 264 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-- 264 (445)
+||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 689 ~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~ 768 (1026)
T 4f9i_A 689 AAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768 (1026)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999994 578899999999999999999999999999988
Q ss_pred ----cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCC
Q psy10608 265 ----KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAG 338 (445)
Q Consensus 265 ----~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p 338 (445)
++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|
T Consensus 769 ~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl-~V~~~i~d~f~~~L~~~~~~l~vG~p 847 (1026)
T 4f9i_A 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRV-IVLDAVYDKFIERLVSMAKATKVGPS 847 (1026)
T ss_dssp CTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred cccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceE-EecHHHHHHHHHHHHHHHHhcccCCc
Confidence 5789999999999999999999999999999999999999999999999 7777 69999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce---------------------------------------
Q psy10608 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK--------------------------------------- 379 (445)
Q Consensus 339 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~--------------------------------------- 379 (445)
.++++++||+|++.+++++.++|++++++| ++++||....
T Consensus 848 ~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~d 926 (1026)
T 4f9i_A 848 EDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFD 926 (1026)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHH
Confidence 999999999999999999999999999999 9999885210
Q ss_pred ------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 ------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||+.... ..+.+||||+|.||+|+ +++|+++|++|++.|+
T Consensus 927 eAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~~l~~f~~~k~ 1005 (1026)
T 4f9i_A 927 QAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT-KAGGPDYLLHFMDPRV 1005 (1026)
T ss_dssp HHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC-CBTSTTTGGGGEEEEE
T ss_pred HHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC-CcCCHHHHHHhceEEE
Confidence 999986543 34678999999999996 4699999999999999
Q ss_pred EEeecc
Q psy10608 423 VTQLWR 428 (445)
Q Consensus 423 v~~~~~ 428 (445)
|+....
T Consensus 1006 v~~~~~ 1011 (1026)
T 4f9i_A 1006 VTENTM 1011 (1026)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 998753
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-78 Score=638.46 Aligned_cols=389 Identities=20% Similarity=0.266 Sum_probs=346.3
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKA-YETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|.++|+++++.|++|+++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 57899999997654 479999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccC-------ccccccCCC-CceeEEEecC-CeEEEECCCCcch
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG-------ETLAGVAKD-MDIHSYRVPL-GVTAGITPFNFPA 179 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~-------~~~~~~~~~-~~~~~~~~P~-GVv~~I~p~N~P~ 179 (445)
|++++++|+|||..+++.|+..+++.++||+...+.+.+ +..+...++ ...+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999989999999999999877654432 222211112 2357889997 9999999999999
Q ss_pred hhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC-CCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHH
Q psy10608 180 MIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG-CPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGK 257 (445)
Q Consensus 180 ~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~ 257 (445)
.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|+. +.++.| +++|+|+||||+.+|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 8999999999953 333332 5799999999999999
Q ss_pred HHHHHhh--cCCCcEEEeCCCCCeeEecCCC-----CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHH
Q psy10608 258 YIYERGA--KNGKRVQSNMGAKNHGVIMSDA-----NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKK 328 (445)
Q Consensus 258 ~i~~~aa--~~~~~~~lElGGk~~~iV~~da-----Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~ 328 (445)
.|++.++ +++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|++
T Consensus 243 ~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~ 321 (534)
T 2y53_A 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRA-FVPEAALEPVLEALKA 321 (534)
T ss_dssp HHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEE-EEEGGGHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEE-EEeccHHHHHHHHHHH
Confidence 9998875 8899999999999999999999 999999999999999999999999999 7777 6999999999
Q ss_pred HHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-----------c-------------------
Q psy10608 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN-----------L------------------- 378 (445)
Q Consensus 329 ~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-----------~------------------- 378 (445)
+++++++|||.++++++|||+++++++++.++|+++ .+|+++++||.. .
T Consensus 322 ~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 400 (534)
T 2y53_A 322 KLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLH 400 (534)
T ss_dssp HHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTT
T ss_pred HHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHH
Confidence 999999999999999999999999999999999999 689999988741 0
Q ss_pred -------------------------e--------------------------------------EEEeCCCC--------
Q psy10608 379 -------------------------K--------------------------------------VGINVPIP-------- 387 (445)
Q Consensus 379 -------------------------~--------------------------------------V~iN~~~~-------- 387 (445)
+ ||||+++.
T Consensus 401 ~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~ 480 (534)
T 2y53_A 401 DVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG 480 (534)
T ss_dssp TCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS
T ss_pred hCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC
Confidence 1 99997532
Q ss_pred CCCCCCccCCCCCCccCCCCc-chHHHHHHhheeEEEEeec
Q psy10608 388 VPLSMFSFTGSRGSFLGENHF-YGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 388 ~~~~~~pfGG~k~SG~G~~~~-~g~~~l~~~~~~k~v~~~~ 427 (445)
...+.+||||+|+||+| ++ +|++|+++|++.|++....
T Consensus 481 ~~~~~~pfGG~k~SG~G--r~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 481 NVMPMSLHGGPGRAGGG--EELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp CCCTTSEECCSGGGCSC--CEESGGGGGGGGEEEEEEEEEH
T ss_pred CCCCCCCCCCcccCCCC--CCcchHHHHHHHhhhheeecCH
Confidence 12467999999999999 56 6999999999999998643
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-76 Score=612.94 Aligned_cols=367 Identities=23% Similarity=0.315 Sum_probs=320.3
Q ss_pred eEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh
Q psy10608 46 WIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE 125 (445)
Q Consensus 46 ~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 125 (445)
.+++.||.||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 7 ~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 86 (457)
T 3lns_A 7 HHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD 86 (457)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH
T ss_pred cccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHHHHHccCcccccC-ccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCC
Q psy10608 126 -GDVLRGLQVVEQCCSIPTIMQG-ETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201 (445)
Q Consensus 126 -~ev~~~~~~l~~~a~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps 201 (445)
.|+..+++.++|+++..+...+ +..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 166 (457)
T 3lns_A 87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS 166 (457)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 5999999999999876544332 22211 1124567899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeE
Q psy10608 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281 (445)
Q Consensus 202 ~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~i 281 (445)
+.+|.++.+|++++.++ +|+|+||+|+|+.+.++.|+. ++||+|+||||+++|+.|++.+++++||+++|||||||+|
T Consensus 167 ~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~i 244 (457)
T 3lns_A 167 ETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLI 244 (457)
T ss_dssp TTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEE
T ss_pred CCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCe
Confidence 99999999999999999 999999999998888999998 6899999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHH
Q psy10608 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILS 359 (445)
Q Consensus 282 V~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~ 359 (445)
|++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|++++++++ |.++ ++|||+++++++++.+
T Consensus 245 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~ 318 (457)
T 3lns_A 245 VLPDADLDQTVNQLMFGKFINSGQTXIAPDYL-YVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVS 318 (457)
T ss_dssp ECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEE-EEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCCccCCceE-EEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999 7777 6999999999999988 6665 9999999999999999
Q ss_pred HHHHHHHcCCEEEeCCccce------------------------------------------------------------
Q psy10608 360 LIQSGVDEGATLLLDGRNLK------------------------------------------------------------ 379 (445)
Q Consensus 360 ~i~~a~~~Ga~~~~GG~~~~------------------------------------------------------------ 379 (445)
+|+++. +++++||....
T Consensus 319 ~i~~a~---~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d 395 (457)
T 3lns_A 319 LLEATQ---GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395 (457)
T ss_dssp HHHHCC---SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSC
T ss_pred HHHhcC---CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCC
Confidence 999863 59999986310
Q ss_pred ---------------EEEeCCCC-CCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ---------------VGINVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ---------------V~iN~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++.. ...+.+||||+|+||+| +++|++|+++||+.|+|++
T Consensus 396 ~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 396 MDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG--EYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp HHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEEC--CBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCC--CCchHHHHHHhhCeeEEEe
Confidence 99998643 23578999999999999 6799999999999999975
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-75 Score=606.71 Aligned_cols=368 Identities=22% Similarity=0.286 Sum_probs=325.0
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccC
Q psy10608 63 KATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSI 141 (445)
Q Consensus 63 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~ 141 (445)
..+.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++ .|+..++..++|++..
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 346779999999999999999999999999999999999999999999999999999999997 4999888888877654
Q ss_pred cc-cccCcccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHc
Q psy10608 142 PT-IMQGETLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA 218 (445)
Q Consensus 142 ~~-~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 218 (445)
.. +....... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 173 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY 173 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 32 22111111 0112345788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHH
Q psy10608 219 GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGA 298 (445)
Q Consensus 219 GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~ 298 (445)
+|+|+||+|+|+.+.+..|+.| ++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||+|.|++.++++
T Consensus 174 -lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 174 -LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp -SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred -CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 9999999999987777888888 79999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q psy10608 299 AFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376 (445)
Q Consensus 299 ~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 376 (445)
+|.|+||.|++++|| +||+ +|+|+++|+++++++ +|+|.++++++|||+++++++++.++| +||++++||.
T Consensus 252 ~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~ 324 (469)
T 3sza_A 252 KFMNSGQTCVAPDYI-LCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGT 324 (469)
T ss_dssp HHGGGGCCTTSCCEE-EECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCC
T ss_pred HHhcCCCCCCCCcEE-EEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCc
Confidence 999999999999999 7787 699999999999998 599999999999999999999999999 6999999996
Q ss_pred cce--------------------------------------------------------------------------EEE
Q psy10608 377 NLK--------------------------------------------------------------------------VGI 382 (445)
Q Consensus 377 ~~~--------------------------------------------------------------------------V~i 382 (445)
... |||
T Consensus 325 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~v 404 (469)
T 3sza_A 325 GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAA 404 (469)
T ss_dssp EETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEE
T ss_pred cCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 310 999
Q ss_pred eCCCC-CCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccccc--cccccccCCC
Q psy10608 383 NVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD--VTHSKAAVSM 441 (445)
Q Consensus 383 N~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~~--~~~~~~~~~~ 441 (445)
|++.. ...+.+||||+|+||+| +++|++|+++||+.|+|+++....+ ....+|+|.-
T Consensus 405 N~~~~~~~~~~~PfGG~k~SG~G--r~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~ 464 (469)
T 3sza_A 405 NDVIVHITLHSLPFGGVGNSGMG--SYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPA 464 (469)
T ss_dssp SCSSGGGSCTTSCBCCCGGGEEC--CBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC
T ss_pred eCCCCCCCCCCCCcCCccccccC--ccchHHHHHHhhCeeEEEECCcccccccccccCCCCc
Confidence 98652 23478999999999999 6799999999999999998754433 4567888864
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-75 Score=610.24 Aligned_cols=384 Identities=19% Similarity=0.206 Sum_probs=339.2
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEE-EeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVT-RVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKA 104 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~-~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 104 (445)
.+...++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEA 100 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 445678999999997643 89999999998 999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccc--cCccc----cc--cCCCCceeEEEecCCeEEEECCCC
Q psy10608 105 NMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM--QGETL----AG--VAKDMDIHSYRVPLGVTAGITPFN 176 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~--~~~~~~~~~~~~P~GVv~~I~p~N 176 (445)
++++|++++++|+|||..+++.|+..+++.++||++..+.. .+... +. ...+...++.++|+|||++|+|||
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 101 RAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 99999999999999999999999999999999999776542 22211 10 012345688999999999999999
Q ss_pred cchhhhH--hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHH----HHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEe
Q psy10608 177 FPAMIPL--WMFPVAIACGNTHVIKPSERDPGACMMLVDML----TQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISF 249 (445)
Q Consensus 177 ~P~~~~~--~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~f 249 (445)
||+.+.+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|+||+|+| +.+++++|+.||+|++|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9999865 99999999999999999999999999998875 568999999999999 5688999999999999999
Q ss_pred eCCHHHHHHHHHHhhcCC--CcEEEeCCCCCeeEecCCC---CHHHHHHHHHHHhhcccCCcccccceEEEecc---cch
Q psy10608 250 VGSDQAGKYIYERGAKNG--KRVQSNMGAKNHGVIMSDA---NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVE 321 (445)
Q Consensus 250 tGs~~~g~~i~~~aa~~~--~~~~lElGGk~~~iV~~da---Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~ 321 (445)
|||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|| +||+ +|+
T Consensus 261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~~i~d~ 339 (528)
T 3v4c_A 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIA-VVIEGADADR 339 (528)
T ss_dssp ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEE-EEESSHHHHH
T ss_pred ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEE-EEecccHHHH
Confidence 999999999999999999 9999999999999999999 889999999999999999999999999 6665 599
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc---------------c---e----
Q psy10608 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN---------------L---K---- 379 (445)
Q Consensus 322 f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~---------------~---~---- 379 (445)
|+++|++++++++.| +.+||++++++.+++.++++ ++||++++||.. . .
T Consensus 340 f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~~g~~~~PTvl~~~~~~~~~~~i~~ 410 (528)
T 3v4c_A 340 FTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATESSGRDASPNLFETTGAQFLADHALG 410 (528)
T ss_dssp HHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCCCTTEECCEEEEEEHHHHHHCGGGG
T ss_pred HHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCcCCceeccEEEEecCcccccChhhc
Confidence 999999999998754 57899999888888887764 479999999841 0 0
Q ss_pred ---------------------------------------------------------EEEeCCCC-C-CCCCCccCC-CC
Q psy10608 380 ---------------------------------------------------------VGINVPIP-V-PLSMFSFTG-SR 399 (445)
Q Consensus 380 ---------------------------------------------------------V~iN~~~~-~-~~~~~pfGG-~k 399 (445)
||||++.. . ..+.+|||| +|
T Consensus 411 eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~ 490 (528)
T 3v4c_A 411 EEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYP 490 (528)
T ss_dssp CCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTT
T ss_pred ccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCC
Confidence 99998543 2 347899999 99
Q ss_pred CCccCCCCcchHHHHHHhheeEEEE
Q psy10608 400 GSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 400 ~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
.||+|+++.+|++|+++|++.|++.
T Consensus 491 ~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 491 ASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp TBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCCCCCCCcHHHHHHhchhHHhh
Confidence 9999965456999999999999863
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-72 Score=590.37 Aligned_cols=375 Identities=17% Similarity=0.225 Sum_probs=331.1
Q ss_pred eCCCCCeEEeecCCCCceE-EEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q psy10608 40 ESKATDWIDLHNPATNEVV-TRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQG 118 (445)
Q Consensus 40 ~~~~~~~~~~~~P~~g~~i-~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 118 (445)
.+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|
T Consensus 2 ~~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 81 (510)
T 1ez0_A 2 NPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETA 81 (510)
T ss_dssp ---CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred CCCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 3456778999999999999 799999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHhhhHHHHHHHHHHHHHccCccc--ccCcccc----ccCC-C-CceeEEEecCCeEEEECCCCcchhhh--HhHHHH
Q psy10608 119 KTLADAEGDVLRGLQVVEQCCSIPTI--MQGETLA----GVAK-D-MDIHSYRVPLGVTAGITPFNFPAMIP--LWMFPV 188 (445)
Q Consensus 119 k~~~~a~~ev~~~~~~l~~~a~~~~~--~~~~~~~----~~~~-~-~~~~~~~~P~GVv~~I~p~N~P~~~~--~~~i~~ 188 (445)
||..+++.|+..+++.++||++..+. ..+..+. ...+ + ...++.++|+|||++|+|||||+.+. ++++++
T Consensus 82 k~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 82 LPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 99999999999999999999877653 2222221 0101 1 23578999999999999999999985 499999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHH----HHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDML----TQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
||++||+||+|||+.+|+++..|++++ .++|+|+|+||+|+| +.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 999999999999999999999999998 568999999999999 677899999999999999999999999999999
Q ss_pred hcCC--CcEEEeCCCCCeeEecCCCCHH--HHHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHhcccc
Q psy10608 264 AKNG--KRVQSNMGAKNHGVIMSDANRS--NTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 264 a~~~--~~~~lElGGk~~~iV~~daDl~--~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~l~vG 336 (445)
++++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++
T Consensus 242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~~i~d~f~~~l~~~~~~~~~- 319 (510)
T 1ez0_A 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV-FALNTPETQAFIETAQSLIRQQSP- 319 (510)
T ss_dssp HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE-EEESSHHHHHHHHHHHHHHHHCCC-
T ss_pred hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEE-EEeCCccHHHHHHHHHHHHHhcCC-
Confidence 9886 9999999999999999999999 999999999999999999999999 6666 49999999999999874
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEeCCc--c------c---------e-------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVD-EGATLLLDGR--N------L---------K------------------- 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~~~~GG~--~------~---------~------------------- 379 (445)
||++++.+.+++.++|+++++ +|+++++||. . + .
T Consensus 320 ---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~ 390 (510)
T 1ez0_A 320 ---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390 (510)
T ss_dssp ---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCCCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCCCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC
Confidence 688899999999999999994 7999999973 0 0 1
Q ss_pred ------------------------------------------EEEeCCCCC--CCCCCccCC-CCCCccCCCCcchHHHH
Q psy10608 380 ------------------------------------------VGINVPIPV--PLSMFSFTG-SRGSFLGENHFYGKQGF 414 (445)
Q Consensus 380 ------------------------------------------V~iN~~~~~--~~~~~pfGG-~k~SG~G~~~~~g~~~l 414 (445)
|+||++... ..+.+|||| +|+||+|+++++|++||
T Consensus 391 ~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl 470 (510)
T 1ez0_A 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAI 470 (510)
T ss_dssp HHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGG
T ss_pred HHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHH
Confidence 999986432 136799999 79999986556899999
Q ss_pred HHhheeEEEEe
Q psy10608 415 YFYTETKTVTQ 425 (445)
Q Consensus 415 ~~~~~~k~v~~ 425 (445)
++|++.|++.-
T Consensus 471 ~~~~~~k~~~~ 481 (510)
T 1ez0_A 471 HRWLRPVAYQA 481 (510)
T ss_dssp GGGEEEEEEES
T ss_pred HHhheEEEEcC
Confidence 99999998763
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-73 Score=624.67 Aligned_cols=362 Identities=25% Similarity=0.316 Sum_probs=334.9
Q ss_pred eeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHcc
Q psy10608 61 VPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS 140 (445)
Q Consensus 61 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~ 140 (445)
++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++..|+..+++.++||+.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccccCcc--ccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHc
Q psy10608 141 IPTIMQGET--LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA 218 (445)
Q Consensus 141 ~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 218 (445)
..+...+.. .+ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 624 ~a~~~~g~~~~~~-~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 624 QGRKLFGSETAMP-GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHHSSCEECC-CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCcccccc-CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 877665532 22 234567789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc---CCCcEEEeCCCCCeeEecCCCCHHHHHHHH
Q psy10608 219 GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK---NGKRVQSNMGAKNHGVIMSDANRSNTLNQL 295 (445)
Q Consensus 219 GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~---~~~~~~lElGGk~~~iV~~daDl~~a~~~i 295 (445)
|+|+|+||+|+|+++.++.|+.||+|++|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+
T Consensus 703 GlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~i 782 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782 (1001)
T ss_dssp TCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred CcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHH
Confidence 99999999999965559999999999999999999999999999885 489999999999999999999999999999
Q ss_pred HHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEe
Q psy10608 296 VGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLL 373 (445)
Q Consensus 296 v~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 373 (445)
++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||||++.+++++.++|++++++| ++ +
T Consensus 783 v~s~f~naGQ~C~A~~rl-lV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~ 859 (1001)
T 3haz_A 783 VTSAFRSAGQRCSALRLL-FVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-H 859 (1001)
T ss_dssp HHHHHGGGGCSTTCEEEE-EEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-E
T ss_pred HHHHHhCCCCCCCCCcee-eccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-e
Confidence 999999999999999999 7777 69999999999999999999999999999999999999999999999988 88 7
Q ss_pred CCccce--------------------------------------------------------------------------
Q psy10608 374 DGRNLK-------------------------------------------------------------------------- 379 (445)
Q Consensus 374 GG~~~~-------------------------------------------------------------------------- 379 (445)
||....
T Consensus 860 gg~~~~~G~fv~PTvl~~~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~ 939 (1001)
T 3haz_A 860 FAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGN 939 (1001)
T ss_dssp EECCCCSSSCCCCEEEECSSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred ccccCCCCcEEeeEEecCCCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeee
Confidence 764210
Q ss_pred EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||++... ..+.+||||+|.||+|+ +++|++||++|++.|+|++..
T Consensus 940 V~VN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 940 IYVNRNMIGAVVGVQPFGGNGLSGTGP-KAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp EEESSCSCCCCTTTSCBCCCGGGBCCC-CBTSTTSGGGGEEEEEEEEEC
T ss_pred EEEeCCCcCCCCCCCCCCCcccCcCCC-CCCCHHHHHHhceeeEEEECC
Confidence 999987543 23568999999999996 468999999999999999865
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-68 Score=553.11 Aligned_cols=372 Identities=14% Similarity=0.112 Sum_probs=282.4
Q ss_pred EeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------CCC
Q psy10608 48 DLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQ-------GKT 120 (445)
Q Consensus 48 ~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 120 (445)
-++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hH----hhhHHHHHHHHHHHHHccCcccccCcccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCC
Q psy10608 121 LA----DAEGDVLRGLQVVEQCCSIPTIMQGETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGN 194 (445)
Q Consensus 121 ~~----~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN 194 (445)
+. ++..|+..+++.++||++..+...++..+.. ..+...++.++|+|||++|+||| |.+.+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 5678999999999999977665555543311 13445688999999999999888 88777 89999999999
Q ss_pred EEEEeCCCCChHHHHHHHHHHHHc----CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcE
Q psy10608 195 THVIKPSERDPGACMMLVDMLTQA----GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270 (445)
Q Consensus 195 ~VVlKps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~ 270 (445)
+||+|||+.+|.++..|++++.++ | |+|+||+|+|+.++++.|+.||+||+|+||||+.+|+.|++.++ +||+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 999999999999999999999999 9 99999999997678899999999999999999999999999887 8999
Q ss_pred EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cc-hHHHHHHHHHHh----ccccC------
Q psy10608 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AV-EWLPELKKRAEA----LKVSA------ 337 (445)
Q Consensus 271 ~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~-~f~~~l~~~~~~----l~vG~------ 337 (445)
++|||||||+||++|||+|.|++.+++++|.| ||.|++++|| +||+ +| .+++++++.+.+ +..|.
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rv-lV~~~i~d~p~~~~~i~~~~~~Ga~v~~G~~~~~~g 322 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETL-LIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYL 322 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEE-EEEGGGTTSHHHHHHHHHHHHTTCEEEECHHHHC--
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEE-EEeccccchHHHHHHHHHHHhCCCEEEeCCcccccC
Confidence 99999999999999999999999999999999 9999999999 7777 44 466776665532 11111
Q ss_pred ----CC---CCCCCCCCCCCHHHHHHHHHHHHHHHHc--C-CEEEeCCccc------------eEEEeCCCCCCCCCCcc
Q psy10608 338 ----GN---VPGTDLGPVISPQAKERILSLIQSGVDE--G-ATLLLDGRNL------------KVGINVPIPVPLSMFSF 395 (445)
Q Consensus 338 ----p~---~~~~~~Gpli~~~~~~~v~~~i~~a~~~--G-a~~~~GG~~~------------~V~iN~~~~~~~~~~pf 395 (445)
+. -.+-.+||++.-..++..++.|+.+-+. | +--++..... .|+||++... .+.+||
T Consensus 323 ~~~~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~Pf 401 (463)
T 2h5g_A 323 TFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF-SDGYRF 401 (463)
T ss_dssp -------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTT
T ss_pred ccCCCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC-CCCCCC
Confidence 10 1122678864332223333333333332 2 1223332210 1999987544 467999
Q ss_pred CCCCCCccC--CCCcchHHHHHHhheeEEEEeec
Q psy10608 396 TGSRGSFLG--ENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 396 GG~k~SG~G--~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||+|+||+| +++++|++||++|++.|+|+...
T Consensus 402 GG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 402 GLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp TSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999 54458999999999999998765
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-65 Score=530.83 Aligned_cols=358 Identities=18% Similarity=0.214 Sum_probs=309.7
Q ss_pred EeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHH
Q psy10608 60 RVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQC 138 (445)
Q Consensus 60 ~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 138 (445)
.++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..+++. +...+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 4566788999999999999999999999999999999999999999999999999999999988764 555555655443
Q ss_pred ccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHH----H
Q psy10608 139 CSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD----M 214 (445)
Q Consensus 139 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~----~ 214 (445)
....+. .+. +. ...+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++ +
T Consensus 85 ~~~~~~-~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDMKT-IGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTCCC-SEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhcccc-cce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 332211 122 11 1245667889999999999999999999999999999999999999999999999987654 5
Q ss_pred HHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCC-CCCeeEecCCCCHHHHH
Q psy10608 215 LTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMG-AKNHGVIMSDANRSNTL 292 (445)
Q Consensus 215 l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElG-Gk~~~iV~~daDl~~a~ 292 (445)
+.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+ .+++++++||+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 6889999999999999 5788999999999999999999984 55667789999 8888 99999999999999999
Q ss_pred HHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHH-------HhccccCCC-CCCCCCCCCCCHHHHHHHHHHHH
Q psy10608 293 NQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRA-------EALKVSAGN-VPGTDLGPVISPQAKERILSLIQ 362 (445)
Q Consensus 293 ~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~-------~~l~vG~p~-~~~~~~Gpli~~~~~~~v~~~i~ 362 (445)
+.+++++|+|+||.|++++|| +||+ +|+|+++|+++. +++++|+|. ++++++||+++.++++++.++++
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~ 315 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSV-VVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAG 315 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEE-EEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTT
T ss_pred HHHHHHHhcCCCCCCCCCcEE-EEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhh
Confidence 999999999999999999999 7777 699999999985 567899987 77899999999999999999999
Q ss_pred HHHHcCCEEEeCCccc---e------------------------------------------------------------
Q psy10608 363 SGVDEGATLLLDGRNL---K------------------------------------------------------------ 379 (445)
Q Consensus 363 ~a~~~Ga~~~~GG~~~---~------------------------------------------------------------ 379 (445)
+++.+|+++++||... .
T Consensus 316 ~a~~~ga~vl~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G 395 (464)
T 3k9d_A 316 LTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVS 395 (464)
T ss_dssp CCCCTTCCEEEEECCCCSTTCGGGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEE
T ss_pred hhhcCCCEEEEcCCCCCCCCCcccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEe
Confidence 9999999999998420 0
Q ss_pred -EEEeCCCCC--------CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccc
Q psy10608 380 -VGINVPIPV--------PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRE 429 (445)
Q Consensus 380 -V~iN~~~~~--------~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~ 429 (445)
|+||+++.+ ..+.+|||| +.+|.| .++|..|+++|++.|+|....++
T Consensus 396 ~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g--~~~~~~~~~~~~~~k~v~~~~~~ 451 (464)
T 3k9d_A 396 RLLVNTPGALGGIGATTNLVPALTLGC-GAVGGS--SSSDNIGPENLFNIRRIATGVLE 451 (464)
T ss_dssp EEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTC--SCCSBCCGGGSEEEEEEEECCCC
T ss_pred EEEEECCccccccccCCCCCccccccC-cCCCCC--cCCCCCCHHHheEEEEEEecCCc
Confidence 999987531 347899998 678999 55899999999999999876543
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-63 Score=509.27 Aligned_cols=353 Identities=16% Similarity=0.173 Sum_probs=281.6
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----Hhhh--------HHHHHHHH
Q psy10608 66 PAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL----ADAE--------GDVLRGLQ 133 (445)
Q Consensus 66 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 133 (445)
.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 3554 37899999
Q ss_pred HHHHHccCcccccCccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHH
Q psy10608 134 VVEQCCSIPTIMQGETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211 (445)
Q Consensus 134 ~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l 211 (445)
.+++++++.+.. ++..+. ...+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..|
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999999877543 443331 123456789999999999999998 8 68999999999999999999999999999999
Q ss_pred HHHH----HHcCCCCcceEEEeC-Ch-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCC
Q psy10608 212 VDML----TQAGCPPGVVNVIHG-AH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285 (445)
Q Consensus 212 ~~~l----~~aGlP~gvv~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 285 (445)
++++ .++|+|+|+||+|+| +. ..++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9997 799999999999998 44 4678888999999999999999999999876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc---cCCCC--------------------
Q psy10608 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV---SAGNV-------------------- 340 (445)
Q Consensus 286 aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v---G~p~~-------------------- 340 (445)
||+|.|++.+++++|.|+| .|++++|| +||+ +|+|+++|+++++++++ |||.+
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~~~~~~~~~ 336 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETL-LVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDW 336 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEE-EEEGGGHHHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCCEECCSGGG
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceE-EEeHHHHHHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcccCCCchhh
Confidence 9999999999999999999 99999999 7777 69999999999999988 76521
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHH--cC-CEEEeCCccc------------eEEEeCCCCCCCCCCccCCCCCCccC-
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVD--EG-ATLLLDGRNL------------KVGINVPIPVPLSMFSFTGSRGSFLG- 404 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~--~G-a~~~~GG~~~------------~V~iN~~~~~~~~~~pfGG~k~SG~G- 404 (445)
.+-.+||++.--.++..++.|+.+-+ .| +--++..... .|+||+++.+ .+..||||.|+||+|
T Consensus 337 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~ 415 (444)
T 4ghk_A 337 RTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRF-ADGFEFGLGAEIGISN 415 (444)
T ss_dssp TCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGG-CSTTTTTCSCCSEEEC
T ss_pred hccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCcc-CCCCCcCCcccccccC
Confidence 12346886543333333344444333 23 1122222210 1999987654 367899999999997
Q ss_pred -CCCcchHHHHHHhheeEEEEeec
Q psy10608 405 -ENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 405 -~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
+.|++|++|+++||+.|+|++..
T Consensus 416 ~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 416 DKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CcccCCChhHHHhhceEEEEEECC
Confidence 33568999999999999998765
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-62 Score=503.27 Aligned_cols=353 Identities=15% Similarity=0.148 Sum_probs=292.3
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----Hhhh--------HHHHHHHH
Q psy10608 66 PAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL----ADAE--------GDVLRGLQ 133 (445)
Q Consensus 66 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 133 (445)
.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .++. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 4553 68999999
Q ss_pred HHHHHccCcccccCcccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHH
Q psy10608 134 VVEQCCSIPTIMQGETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211 (445)
Q Consensus 134 ~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l 211 (445)
.++||+++.+. .++..+.. ..+...++.++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987765 44433311 12445688999999999999886 478999999999999999999999999999999
Q ss_pred HHHHH----HcCCCCcceEEEeC-Ch-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCC
Q psy10608 212 VDMLT----QAGCPPGVVNVIHG-AH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285 (445)
Q Consensus 212 ~~~l~----~aGlP~gvv~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 285 (445)
++++. ++|+|+|++|+|+| +. +.++.|..||+||+|+||||+++|+.|++.+ +||+++|||||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99998 68999999999998 44 4678888999999999999999999999887 5999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc---cCC------------C---CCCCCC
Q psy10608 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV---SAG------------N---VPGTDL 345 (445)
Q Consensus 286 aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v---G~p------------~---~~~~~~ 345 (445)
||+|.|++.+++++|.|+| .|++++|+ +||+ +|+|+++|.++++++++ |++ . -.+-.+
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~~~~gg~~~~~~~Ptl~~~~~~i~~eEiF 324 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKL-LVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYL 324 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEE-EEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCC
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEE-EEehhhHHHHHHHHHHHHHHcCCeeecChhhhhhCCcccCCCcchhhcccc
Confidence 9999999999999999999 99999999 7777 69999999999998876 321 0 112347
Q ss_pred CCCCCHHHHHHHHHHHHHHHHc--C-CEEEeCCccc------------eEEEeCCCCCCCCCCccCCCCCCccC--CCCc
Q psy10608 346 GPVISPQAKERILSLIQSGVDE--G-ATLLLDGRNL------------KVGINVPIPVPLSMFSFTGSRGSFLG--ENHF 408 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~--G-a~~~~GG~~~------------~V~iN~~~~~~~~~~pfGG~k~SG~G--~~~~ 408 (445)
||++.--.++..++.|+.+-+. | +--+++.... .|+||++... .+..||||.|+||+| +.++
T Consensus 325 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGg~~~SG~g~~~~~~ 403 (427)
T 1o20_A 325 DLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF-TDGGQFGFGAEIGISTQRFHA 403 (427)
T ss_dssp SSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTCSCCSCEECSSSSC
T ss_pred cceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCcc-CCCCCCCCcccccccCCcccC
Confidence 9976544344444444444332 3 1223332210 1999986543 467899999999997 3346
Q ss_pred chHHHHHHhheeEEEEeec
Q psy10608 409 YGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 409 ~g~~~l~~~~~~k~v~~~~ 427 (445)
+|++|+++|++.|+|+..+
T Consensus 404 ~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 404 RGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp CEECCTGGGEEEEEEEECS
T ss_pred CChHHHHHHhceEEEEECC
Confidence 8999999999999998765
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-63 Score=511.47 Aligned_cols=348 Identities=16% Similarity=0.140 Sum_probs=264.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----Hhhh-HHHHH-HHHHHHHHccC
Q psy10608 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL----ADAE-GDVLR-GLQVVEQCCSI 141 (445)
Q Consensus 68 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~a~~ 141 (445)
.+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .++. .|+.. ++..++|+++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8875 78888 88888888876
Q ss_pred ccccc------Ccccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHH
Q psy10608 142 PTIMQ------GETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD 213 (445)
Q Consensus 142 ~~~~~------~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~ 213 (445)
.+... ++..+.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 55443 3332211 12445688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 214 MLT----Q----AGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 214 ~l~----~----aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
++. + +|+|+|+||+|+ +. ++++.|+.||+||+|+||||+++|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 65 6889999999999999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEeccc-chHHHHHHHHHHhccc---cCCCC--------------------
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA-VEWLPELKKRAEALKV---SAGNV-------------------- 340 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~-~~f~~~l~~~~~~l~v---G~p~~-------------------- 340 (445)
|||+|.|++.+++++|.|+| .|++++|| +||++ |+|+++|.++++++++ |||.+
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rv-lV~~~id~f~~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~P 326 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETL-LINPKFSKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC 326 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEE-EECTTSTTHHHHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHT
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEE-EEECCHHHHHHHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCC
Confidence 99999999999999999999 99999999 88885 9999999999999987 87632
Q ss_pred -----------CCCCCCCCCCHHHHHHHHHHHHHHHHcC---CEEEeCCccc------------eEEEeCCCCCCCCCCc
Q psy10608 341 -----------PGTDLGPVISPQAKERILSLIQSGVDEG---ATLLLDGRNL------------KVGINVPIPVPLSMFS 394 (445)
Q Consensus 341 -----------~~~~~Gpli~~~~~~~v~~~i~~a~~~G---a~~~~GG~~~------------~V~iN~~~~~~~~~~p 394 (445)
.+-.+||++.-..++..++.|+.+-+.+ +--++..... .|+||++... .+..|
T Consensus 327 tvlv~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~p 405 (468)
T 1vlu_A 327 KTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRF-ADGFR 405 (468)
T ss_dssp TBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGG-CC---
T ss_pred ceeeCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCC
Confidence 0012333332222222222222222111 0001111100 0999986544 36789
Q ss_pred cC-----CCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 395 FT-----GSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 395 fG-----G~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|| |+|.||+| ++ |++|+++|++.|+|+...
T Consensus 406 fG~Gg~~G~~~SG~g--~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 406 YGFGAEVGISTSKIH--AR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCCCcceecCCCC--CC-cchHHHHhcceEEEEECC
Confidence 99 99999999 66 999999999999998764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=463.14 Aligned_cols=287 Identities=17% Similarity=0.203 Sum_probs=249.5
Q ss_pred eeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHH-HHH
Q psy10608 61 VPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVV-EQC 138 (445)
Q Consensus 61 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 138 (445)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. ++..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999999999999999999999999999999986 777788777 566
Q ss_pred ccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHH--
Q psy10608 139 CSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT-- 216 (445)
Q Consensus 139 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~-- 216 (445)
+.. ...+. ++ ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 81 ~~~--~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KDE--QTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TTC--CCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhc--ccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 542 11222 11 1234456889999999999999999999999999999999999999999999999998888875
Q ss_pred --HcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHH
Q psy10608 217 --QAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLN 293 (445)
Q Consensus 217 --~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~ 293 (445)
++|+|+|+||+|+| +.+.++.|+.||+|++|+||||+.+++ ++++++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 79999999999999 678899999999999999999998654 56677899999999999999999999999999
Q ss_pred HHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEE
Q psy10608 294 QLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATL 371 (445)
Q Consensus 294 ~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~ 371 (445)
.+++++|+|+||.|++++|+ +||+ +|+|+++|+++ +||++++++.+++.++|+++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAV-IVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEE-EEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG
T ss_pred HHHHHHhCCCCCccCCCcEE-EEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE
Confidence 99999999999999999999 7776 69999998875 389999999999999998655555554
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=91.16 E-value=13 Score=36.88 Aligned_cols=236 Identities=14% Similarity=0.080 Sum_probs=125.8
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-------h-------Hhh--------hHHHHHHHHHHHHHc
Q psy10608 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKT-------L-------ADA--------EGDVLRGLQVVEQCC 139 (445)
Q Consensus 82 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-------~-------~~a--------~~ev~~~~~~l~~~a 139 (445)
.|+..+..+-.+..+.+.+.++++.|+-....++...+- + ..+ +..+..+.+.++.|.
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 455555566666777788888888777666566554321 0 011 122444455555443
Q ss_pred cCcccccCccccccCCCCceeEEEecCCeEEEECCCC-cch-hhhHhHHHHHhhcCCE-EE-EeCCCCChHHHHHHHHHH
Q psy10608 140 SIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFN-FPA-MIPLWMFPVAIACGNT-HV-IKPSERDPGACMMLVDML 215 (445)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N-~P~-~~~~~~i~~ALaaGN~-VV-lKps~~~p~~~~~l~~~l 215 (445)
..... ...... ..++.....++.|+-.|++..|.- +|+ .+.++.++||-.+|+. +| .-|++..... -.+.-..
T Consensus 106 ~~Q~~-~~~~~~-~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~-p~iL~AA 182 (423)
T 4gic_A 106 ERQKL-DSWDYR-EADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMAVPAPRGELN-ALVLAAA 182 (423)
T ss_dssp HHHCC-CCEEEE-CTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEECCCGGGCCC-HHHHHHH
T ss_pred Hhccc-CCcccc-cCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEecCCCCCCcc-HHHHHHH
Confidence 21111 111111 234556677899999999999953 333 3455668999999986 33 3444321111 1122223
Q ss_pred HHcCCCCcceEEEe-CChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEec-CCCCHH
Q psy10608 216 TQAGCPPGVVNVIH-GAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIM-SDANRS 289 (445)
Q Consensus 216 ~~aGlP~gvv~vv~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~-~daDl~ 289 (445)
..+|.- .+.. |+.....+|. .-|.||+|+=.|..-+..+=..-.. ..-+=+.-|-.--+||. +++|.+
T Consensus 183 ~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g--~VgIDm~AGPSEilViAD~~a~p~ 256 (423)
T 4gic_A 183 YISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG--QVGIDMVAGPSEILVISDGRTDPD 256 (423)
T ss_dssp HHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT--TBEECCCCCCCEEEEEECSCSCHH
T ss_pred HhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC--CcCcccccccceEEEEeCCCCCHH
Confidence 445553 3333 4444445554 3678999999999876432211111 11121222333333333 358999
Q ss_pred HHHHHHHHHhhcccCCcccccceEEEecccchHHHHHHHHHHh
Q psy10608 290 NTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEA 332 (445)
Q Consensus 290 ~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~~~f~~~l~~~~~~ 332 (445)
..+..++.-+=+... +. -+ ++-.+++|.+++.+.+.+
T Consensus 257 ~vAaDLlsQAEHd~~----a~-~i-LvT~s~~la~~V~~~i~~ 293 (423)
T 4gic_A 257 WIAMDLFSQAEHDED----AQ-AI-LISPDAAHLEAVQASIER 293 (423)
T ss_dssp HHHHHHHHHHTTCTT----CE-EE-EEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCC----Ce-EE-EEeCcHHHHHHHHHHHHH
Confidence 999888876654432 22 23 565666677777666654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 445 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-89 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 0.002 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-89 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-04 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-84 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 0.002 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-71 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 0.001 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-56 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-04 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 3e-54 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 0.004 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 5e-46 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-04 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-40 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-04 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-27 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-21 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-14 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 278 bits (713), Expect = 1e-89
Identities = 104/357 (29%), Positives = 177/357 (49%), Gaps = 8/357 (2%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET---WSKT 86
TK++I+ ++ S + + NPAT E + V + +++ AV +A++A++ W
Sbjct: 14 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 73
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLAD-AEGDVLRGLQVVEQCCSIPTIM 145
R ++L +L ++I+ + LA GK ++ D+ ++ + C +
Sbjct: 74 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 133
Query: 146 QGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
QG T+ + + ++ P+GV I P+NFP ++ LW A++CGNT V+KP+E+ P
Sbjct: 134 QGRTIP-MDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTP 192
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ + ++ +AG PPGVVN++ G A I H D+ ++F GS + GK I E
Sbjct: 193 LTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 252
Query: 265 K-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-EW 322
K N KRV +G K+ ++ +DA+ N + F GQ C+A S + E+
Sbjct: 253 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 312
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
+ +RA+ + PG GP I + E+IL LI+SG EGA L G
Sbjct: 313 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 369
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 37.7 bits (87), Expect = 0.002
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 431
V +N V + F G + S G G+ GF+ YTE KTVT + +
Sbjct: 445 VWVNC-YSVVSAQCPFGGFKMS--GNGRELGEYGFHEYTEVKTVTIKISQKN 493
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 278 bits (712), Expect = 2e-89
Identities = 98/354 (27%), Positives = 170/354 (48%), Gaps = 8/354 (2%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET---WSKT 86
+++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++ W +
Sbjct: 14 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 73
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLAD-AEGDVLRGLQVVEQCCSIPTIM 145
R ++L RL ++I+ + LA T + GK D+ L+ +
Sbjct: 74 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 133
Query: 146 QGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G+T+ + D ++ P+GV I P+NFP ++ W A+A GN V+K +E+ P
Sbjct: 134 HGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 192
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER-G 263
+ + +++ +AG PPGVVN++ G A I H D+ ++F GS + G+ I G
Sbjct: 193 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 252
Query: 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWL 323
+ N KRV +G K+ +IMSDA+ + Q A F GQ A S + +
Sbjct: 253 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 312
Query: 324 PE-LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
E RA++ V T+ GP + ++IL I +G EGA LL G
Sbjct: 313 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 39.6 bits (92), Expect = 6e-04
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 431
V +N V + F G + S G G+ G YTE KTVT + +
Sbjct: 445 VWVNC-YDVFGAQSPFGGYKMS--GSGRELGEYGLQAYTEVKTVTVKVPQKN 493
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 265 bits (677), Expect = 5e-84
Identities = 106/357 (29%), Positives = 170/357 (47%), Gaps = 3/357 (0%)
Query: 27 IATTKLYIDGKFVESKATDWID-LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSK 85
+ Y G+ ++SK + + PAT V+ ++ E++ AV SA+ AY WSK
Sbjct: 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSK 76
Query: 86 TSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
+ I R +V+ II+ +A+ GKT+ +AE D+ Q +E + +
Sbjct: 77 MAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTL 136
Query: 146 QGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G+ + ++ R PLGV AGI +N+P MI W A+ACGN V KPS P
Sbjct: 137 SGQH-IQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTP 195
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
++L ++ +AG P G+VNV+ G + + +C HP++ +SF GS GK + E AK
Sbjct: 196 VTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK 255
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCM-ALSTVIFVGEAVEWLP 324
K V +G K+ +I D N + + A F GQ C + ++L
Sbjct: 256 TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLE 315
Query: 325 ELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
E+ KR +A+ V + T +G +IS +++L + EGA +L G L
Sbjct: 316 EVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS 372
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 38.2 bits (88), Expect = 0.002
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 431
IN P+ + F G + S G G+ +Y++ KTV + D
Sbjct: 452 CYINTYSISPVEV-PFGGYKMSGFG--RENGQATVDYYSQLKTVIVEMGDVD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 231 bits (590), Expect = 1e-71
Identities = 95/351 (27%), Positives = 161/351 (45%), Gaps = 5/351 (1%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
KL I+G+ V + + ++NPAT +V+ + +A+ ++++AV +A A+ W +T+
Sbjct: 3 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPK 61
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG-E 148
R + L +L ++I+ N + AE + GK L A D + + V + +
Sbjct: 62 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121
Query: 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
+ R PLGV A I P+N+P M+ W A+A GN V+KPSE P
Sbjct: 122 AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267
+ L ++ + P GVVN++ G V + + HP +R +S GS G++I A +
Sbjct: 182 LKLAELA-KDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSI 240
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPE-L 326
KR +G K ++ DA+ + + + AGQ C A + + L E L
Sbjct: 241 KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL 300
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN 377
LK A + T+LGP+ S ER+ ++ G ++ G
Sbjct: 301 GAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 351
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 38.6 bits (89), Expect = 0.001
Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424
+N + M G + S G++ G YT + V
Sbjct: 430 TWVNTHFMLVSEM-PHGGQKLSGYGKDM--SLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 190 bits (484), Expect = 3e-56
Identities = 87/353 (24%), Positives = 163/353 (46%), Gaps = 10/353 (2%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K Y++G++ S+ + I ++ PA+ + VP + E++ ASAKKA W S I
Sbjct: 5 KNYVNGEWKLSE--NEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 62
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET- 149
R L ++ +I+ + +++ +++E K A +V+R +++ M+GE
Sbjct: 63 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 122
Query: 150 ----LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
+K R P+G+ I+PFN+P + A+ GN KP +
Sbjct: 123 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 182
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ ++L + +AG P GV N I G + ++I +H + I+F GS G+ I +
Sbjct: 183 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 242
Query: 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLP 324
+ + +G K+ +++ DA+ T ++ AFG +GQRC A+ V+ + + L
Sbjct: 243 M--RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 300
Query: 325 ELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN 377
E + D+ P+I ++ + + LI D+GAT L + +
Sbjct: 301 EKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR 353
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424
V IN F F G++ S G K T K+V
Sbjct: 428 VHINNKTQRGTDNFPFLGAKKSGAGIQG--VKYSIEAMTTVKSVV 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 186 bits (473), Expect = 3e-54
Identities = 115/364 (31%), Positives = 174/364 (47%), Gaps = 14/364 (3%)
Query: 22 QFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE 81
+F RH LYI G++V++K + L+ A +EVV KA AE E+A+ +A KA++
Sbjct: 33 EFGRHY---PLYIGGEWVDTKER-MVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK 88
Query: 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI 141
TW R ++L + +++ ++L + E GK +A DV + +E
Sbjct: 89 TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARA 148
Query: 142 PTIMQGET-LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+ D S+ VPLG I P+NFP I M +A GNT + KP
Sbjct: 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYI 259
+E + ++ +AG PPGVVN + G + V ++ +HP IR I+F GS + G I
Sbjct: 209 AEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268
Query: 260 YER------GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV 313
YE G KR G KN ++ A+ +V +A+G GQ+C A S +
Sbjct: 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL 328
Query: 314 IFV-GEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
I G L + KRAE L V DLGPV+S + + ++LS I+ G +EG +L
Sbjct: 329 ILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL 387
Query: 373 LDGR 376
R
Sbjct: 388 GGKR 391
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 37.2 bits (85), Expect = 0.004
Identities = 8/49 (16%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Query: 380 VGINVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427
+ N I + + F G + S + E K V + +
Sbjct: 469 LYFNRKITGALVGVQPFGGFKLSGTNAKT-GALDYLRLFLEMKAVAERF 516
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 164 bits (415), Expect = 5e-46
Identities = 85/351 (24%), Positives = 153/351 (43%), Gaps = 10/351 (2%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-TWSK 85
+ Y+ G++ S I++ +P + +V + E+E + K +
Sbjct: 14 VPVYPSYLAGEWGGSGQE--IEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARD 71
Query: 86 TSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
R VL + +II+ N+ AE + GK + A G+V + + +
Sbjct: 72 MPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKI 131
Query: 146 QGET----LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201
G+ + + R PLGV A ITPFN+P + + GN V+KPS
Sbjct: 132 GGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS 191
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261
DP M V L AG PP + +++ I + A+SF GS + G+ + +
Sbjct: 192 ISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK 251
Query: 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
G K+ +G + +++ DA+ +++ + AGQRC A+ V+
Sbjct: 252 VGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYG 309
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATL 371
+ + E+ KR +L+V P D+GP+ISP A + +++ I+ V++G +
Sbjct: 310 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRV 360
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 8/49 (16%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428
+ IN + + F G + S + T KT+ ++
Sbjct: 445 IYINDMPRHGIGYYPFGGRKKSGVFREG--IGYAVEAVTAYKTIVFNYK 491
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 148 bits (373), Expect = 2e-40
Identities = 63/311 (20%), Positives = 123/311 (39%), Gaps = 6/311 (1%)
Query: 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GD 127
+ V A++A+ + S+ R Q L LQ +I N+K ++ + + GK + +
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 128 VLRGLQVVEQCCS-IPTIMQGETLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184
V L+ ++ +P + E +A + D++ + PLGV I +N+P + +
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDI 244
A+A GN ++KPSE +L ++ Q + V G + + + D
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDH 181
Query: 245 RAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAG 304
+ GS GK + AK+ V +G K+ + D + ++ F +G
Sbjct: 182 I--MYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSG 239
Query: 305 QRCMALSTVIFVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSG 364
Q C+A ++ + E K++ D G +I+ + +R+ LI +
Sbjct: 240 QTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQ 299
Query: 365 VDEGATLLLDG 375
Sbjct: 300 KVAHGGTWDQS 310
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 380 VGIN-VPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESDVTHS 435
V N V + + + F G S +G ++GK+ F ++ ++ ++ H
Sbjct: 384 VTANDVIVHITVPTLPFGGVGNSGMG--AYHGKKSFETFSHRRSCLVKSLLNEEAHK 438
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 111 bits (278), Expect = 3e-27
Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 20/287 (6%)
Query: 45 DWIDLHNPATNEVV-TRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIK 103
+ N T E + P T E+ A +A K + + + R +L + + ++
Sbjct: 3 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELE 62
Query: 104 ANMKQLAENITEEQGKTLADAEGDVLRGLQVVE--------QCCSIPTIMQGETLAGVAK 155
A + E G++ R + +
Sbjct: 63 ARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLP 122
Query: 156 DMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA--IACGNTHVIKPSERDPGACMMLVD 213
DI ++ LG A NFP A +A G ++K PG ++ +
Sbjct: 123 KPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAE 182
Query: 214 MLTQA----GCPPGVVNVIHGAHDAVNFICDHP-DIRAISFVGSDQAGKYIYERGAKNGK 268
+ QA P + ++ G A+ +I+A+ F GS G+ ++ + +
Sbjct: 183 CIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPE 242
Query: 269 RVQSNMGAKNHGVIMS----DANRSNTLNQLVGAAFGAAGQRCMALS 311
+ +++ +Q V + GQ C
Sbjct: 243 PIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPG 289
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 93.2 bits (230), Expect = 3e-21
Identities = 48/407 (11%), Positives = 109/407 (26%), Gaps = 50/407 (12%)
Query: 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD 127
E+ ++A++ + + + + ++ + K++ E + K +
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 128 VLRG------------LQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF 175
L ++ E + + + V +D + + +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRV-PIGPIGIIY 120
Query: 176 NFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV 235
+ + +A+ GNT +++ + +V + +A + +
Sbjct: 121 ESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT 180
Query: 236 NF--ICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIM-SDANRSNTL 292
+ + + +R + + G + N G N + + A+ +
Sbjct: 181 DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240
Query: 293 NQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQ 352
++ A G A ++ A E+LP + + V T
Sbjct: 241 PVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVP 300
Query: 353 AKE---------RILSLIQ-SGVDEGATLLLD----------GRNLK------------- 379
A E I+++ VDE + N
Sbjct: 301 ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAA 360
Query: 380 VGINVPIPVPLSM-FSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425
V +N F F G H G G T K V
Sbjct: 361 VYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVL 407
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 73.3 bits (179), Expect = 1e-14
Identities = 42/287 (14%), Positives = 88/287 (30%), Gaps = 25/287 (8%)
Query: 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ-LAEN---ITEEQGKTLA 122
+ + +A+KA S R +L+++ + +KAN N + + LA
Sbjct: 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62
Query: 123 DAEGDVLRGL---------QVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGIT 173
D+ L Q ++ + + G+ D + Y+V V +
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLV 121
Query: 174 PFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDM--------LTQAGCPPGVV 225
F + + ++I GN ++K + + + ++ G P G V
Sbjct: 122 IFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSV 181
Query: 226 NVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285
+I D + + I + GS+ + I + V + + D
Sbjct: 182 QLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDED 238
Query: 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEA 332
A+ + A + +I + W E
Sbjct: 239 ADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEG 285
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 90.32 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.1e-87 Score=701.23 Aligned_cols=401 Identities=31% Similarity=0.480 Sum_probs=374.7
Q ss_pred ccccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHHH
Q psy10608 25 RHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKTSIITRQQVLFRLQNI 101 (445)
Q Consensus 25 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~ 101 (445)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|++.|+++|++||+ .|+.+|.++|.++|+++++.
T Consensus 9 ~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~ 88 (494)
T d1bxsa_ 9 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 355666899999999998899999999999999999999999999999999999996 69999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchh
Q psy10608 102 IKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAM 180 (445)
Q Consensus 102 l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 180 (445)
|++++++|++++++|+|||..++. .|+..+++.++|++.+.+...++..+ ...+...++.++|+|||++|+|||||+.
T Consensus 89 L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 167 (494)
T d1bxsa_ 89 IERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIP-MDGNFFTYTRSEPVGVCGQIIPWNFPLL 167 (494)
T ss_dssp HHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeec-CCCCceeEEEEccEEEEEEEeCccchhH
Confidence 999999999999999999999865 58999999999999998888777665 4456678899999999999999999999
Q ss_pred hhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHH
Q psy10608 181 IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYI 259 (445)
Q Consensus 181 ~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i 259 (445)
++++++++||++||+||+|||+.+|.++.+|+++|.++|||+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|
T Consensus 168 ~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i 247 (494)
T d1bxsa_ 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 247 (494)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999995 5678999999999999999999999999
Q ss_pred HHHhhc-CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcccc
Q psy10608 260 YERGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 260 ~~~aa~-~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG 336 (445)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|
T Consensus 248 ~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv-~V~~~~~d~f~~~l~~~~~~~~~g 326 (494)
T d1bxsa_ 248 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL-FVEESIYDEFVRRSVERAKKYVLG 326 (494)
T ss_dssp HHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEE-EEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred HHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEE-ecccchhHHHHHHHHhhhhheeee
Confidence 998885 699999999999999999999999999999999999999999999999 7777 699999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------- 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------- 379 (445)
+|.++++++|||+++++++++.++|++|+++||++++||....
T Consensus 327 ~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~ 406 (494)
T d1bxsa_ 327 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 406 (494)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECC
Confidence 9999999999999999999999999999999999999986321
Q ss_pred --------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 --------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 --------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
||||++... .+.+||||+|+||+| +++|++||++||+.|
T Consensus 407 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~~~SG~G--~~~g~~~~~~ft~~k 483 (494)
T d1bxsa_ 407 LDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVK 483 (494)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEE
T ss_pred HHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCc-CCCCCcCccccccCC--hhhHHHHHHHhcceE
Confidence 999987654 478999999999999 569999999999999
Q ss_pred EEEeecccc
Q psy10608 422 TVTQLWRES 430 (445)
Q Consensus 422 ~v~~~~~~~ 430 (445)
+|++++.+.
T Consensus 484 ~i~~~~~~~ 492 (494)
T d1bxsa_ 484 TVTIKISQK 492 (494)
T ss_dssp EEEEECSCC
T ss_pred EEEEecCCC
Confidence 999988653
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=8.8e-87 Score=695.09 Aligned_cols=400 Identities=31% Similarity=0.482 Sum_probs=374.9
Q ss_pred ccccceeecCEeeeCCCCCeE-EeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 27 IATTKLYIDGKFVESKATDWI-DLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~-~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
+....+||||+|+++.+++++ +++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|+++
T Consensus 17 ~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~ 96 (503)
T d1a4sa_ 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 455578999999998877655 6999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+++|++++++|+|||+.+++.|+..+++.++|++...+...+.... ...+...++.++|+|||++|+|||||+.+.+++
T Consensus 97 ~eela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~ 175 (503)
T d1a4sa_ 97 RDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ-LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEE-CGGGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccc-cCCCcccccccccceeeecccCCCChHHHHHHH
Confidence 9999999999999999999999999999999999888777665544 334567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+.++++.|+.||+|++|+||||+++|+.|++.+++
T Consensus 176 ~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 255 (503)
T d1a4sa_ 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK 255 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 266 ~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +++|+++|.+.++++++|+|.++.+
T Consensus 256 ~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri-~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~ 334 (503)
T d1a4sa_ 256 TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRV-FVQREIMPQFLEEVVKRTKAIVVGDPLLTET 334 (503)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcce-EEEechhhhHHHHHHHhhhhEeecccccccc
Confidence 999999999999999999999999999999999999999999999999 7776 5999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce--------------------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK-------------------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~-------------------------------------------- 379 (445)
++||++++.+++++++++++++++||++++||....
T Consensus 335 ~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 414 (503)
T d1a4sa_ 335 RMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTE 414 (503)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCH
Confidence 999999999999999999999999999999996310
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
|+||+++... +.+||||+|+||+| +++|++||++||+.|+
T Consensus 415 ~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~ 491 (503)
T d1a4sa_ 415 EEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISP-VEVPFGGYKMSGFG--RENGQATVDYYSQLKT 491 (503)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCC-TTSCBCCSGGGEEC--CBSTTGGGGGSEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC-CCCCccCcccCcCC--cchHHHHHHHhhCeEE
Confidence 9999976554 67999999999999 5699999999999999
Q ss_pred EEeeccccc
Q psy10608 423 VTQLWRESD 431 (445)
Q Consensus 423 v~~~~~~~~ 431 (445)
|++++.+.+
T Consensus 492 v~~~~~~~~ 500 (503)
T d1a4sa_ 492 VIVEMGDVD 500 (503)
T ss_dssp EEECCSCCC
T ss_pred EEEcCCCCC
Confidence 999876544
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=2.1e-86 Score=691.40 Aligned_cols=399 Identities=29% Similarity=0.410 Sum_probs=373.5
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKTSIITRQQVLFRLQNII 102 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l 102 (445)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|+++++.|
T Consensus 10 ~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l 89 (494)
T d1o04a_ 10 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLI 89 (494)
T ss_dssp CCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHH
T ss_pred ccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHH
Confidence 45667999999999998899999999999999999999999999999999999995 699999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhh
Q psy10608 103 KANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMI 181 (445)
Q Consensus 103 ~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 181 (445)
++++++|++++++|+|||..++. .|+..++..++|++.......++..+ ...+...++.++|+|||++|+|||||+.+
T Consensus 90 ~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 90 ERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEecccEEEEECCcccHHHH
Confidence 99999999999999999999986 59999999999999988888777665 34556788899999999999999999999
Q ss_pred hHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHH
Q psy10608 182 PLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIY 260 (445)
Q Consensus 182 ~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 260 (445)
.++++++||++||+||+|||+.+|.++.+|++++.++|+|+|++|+|+|+ .+.++.|+.||+|++|.||||+++|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999995 67889999999999999999999999999
Q ss_pred HHhh-cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccC
Q psy10608 261 ERGA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSA 337 (445)
Q Consensus 261 ~~aa-~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~ 337 (445)
++++ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|++.|.++++++++|+
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v-~v~~~i~d~f~~~l~~~~~~~~~g~ 327 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRT-FVQEDIYDEFVERSVARAKSRVVGN 327 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccc-cccchhhHHHHHHHHHHhhheeecC
Confidence 8775 7899999999999999999999999999999999999999999999999 7777 6999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce--------------------------------------
Q psy10608 338 GNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK-------------------------------------- 379 (445)
Q Consensus 338 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~-------------------------------------- 379 (445)
|.++++++|||+++.+++++.++|++|+++||++++||....
T Consensus 328 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~ 407 (494)
T d1o04a_ 328 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407 (494)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCH
Confidence 999999999999999999999999999999999999986321
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
|+||++... .+.+||||+|.||+| +++|.+||++||+.|+
T Consensus 408 ~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~~~SG~G--~~~g~~~~~~ft~~k~ 484 (494)
T d1o04a_ 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMSGSG--RELGEYGLQAYTEVKT 484 (494)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGGEES--CBSTGGGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcccccCC--chhHHHHHHHhcCeEE
Confidence 999986654 467999999999999 5699999999999999
Q ss_pred EEeeccc
Q psy10608 423 VTQLWRE 429 (445)
Q Consensus 423 v~~~~~~ 429 (445)
|+++++.
T Consensus 485 v~~~~p~ 491 (494)
T d1o04a_ 485 VTVKVPQ 491 (494)
T ss_dssp EEEECSC
T ss_pred EEEeCCC
Confidence 9998764
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.2e-84 Score=671.22 Aligned_cols=393 Identities=26% Similarity=0.401 Sum_probs=358.1
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
+.++||||+|+.+ ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 80 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQV 80 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Confidence 4589999999976 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 109 LAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
|+++++.|+|||+.++.. ++..+...++|++.......+...+....+...+++++|+|||++|+|||||+.+.+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a 160 (474)
T d1wnda_ 81 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA 160 (474)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHH
Confidence 999999999999999976 5666667667766655444333333234566788999999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
+||++||+||+|||+.+|.++..++++++++ +|+|++|+|+|+ .++++.|++||+|++|+||||+++|+.|.+.++++
T Consensus 161 ~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~ 239 (474)
T d1wnda_ 161 PALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS 239 (474)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcC
Confidence 9999999999999999999999999999775 999999999995 67889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|.++++++++|+|.++++.
T Consensus 240 ~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv-~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~ 318 (474)
T d1wnda_ 240 IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRI-YAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 318 (474)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEE-EEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred CCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCccccccccc-ccccccchhhhhhhHHHHHhhccCCcCCCCce
Confidence 99999999999999999999999999999999999999999999999 7777 69999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCE-EEeCCccce--------------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGAT-LLLDGRNLK-------------------------------------------- 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~-~~~GG~~~~-------------------------------------------- 379 (445)
+||+++..+.+++.+++++++++|+. ++.||....
T Consensus 319 ~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~ 398 (474)
T d1wnda_ 319 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNW 398 (474)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999985 556654311
Q ss_pred -------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 -------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 -------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||++..+ .+.+||||+|+||+| +++|++|+++||++|+|++++
T Consensus 399 an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 399 ANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp HHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCc-cCCCCcccccccccC--ccCHHHHHHHcCCEEEEEEeC
Confidence 999987665 468999999999999 679999999999999999874
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.8e-81 Score=653.03 Aligned_cols=394 Identities=30% Similarity=0.441 Sum_probs=356.6
Q ss_pred cccceeecCEeeeCCCCCeEEeecCC-CCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~-~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+++++||||+|+.+. ++++++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++
T Consensus 36 ~~~~l~I~G~~v~s~--~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~ 113 (516)
T d1uzba_ 36 RHYPLYIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp EEECEEETTEEECCS--SEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCeEEcCEEECCC--CCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999763 578899985 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccc-ccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA-GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++.|+.++++.++|++.......+.... ....+...+..++|+|||++|+|||||+.+++++
T Consensus 114 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~ 193 (516)
T d1uzba_ 114 RELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccccc
Confidence 999999999999999999999999999999999877665543222 1233556778899999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|.||||+.+|+.|++.++
T Consensus 194 ~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa 273 (516)
T d1uzba_ 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273 (516)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHT
T ss_pred ccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 4678899999999999999999999999999887
Q ss_pred ------cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcccc
Q psy10608 265 ------KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 265 ------~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG 336 (445)
.++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|++++.++++++++|
T Consensus 274 ~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri-~v~~~i~d~~~~~~~~~~~~l~~g 352 (516)
T d1uzba_ 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL-ILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp SCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCcc-ccccccccchhhHHHHHHHhcccC
Confidence 6789999999999999999999999999999999999999999999999 7777 699999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------- 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------- 379 (445)
|.++++++||+++..+++++.++|++|+++|+.++ ||....
T Consensus 353 -~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~-~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d 430 (516)
T d1uzba_ 353 -PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp -CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEE-CCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred -CCcccCccccccCHHHHHHHHHHHHHHHHCCCEEE-CCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCC
Confidence 55788999999999999999999999999997665 443211
Q ss_pred --------------------------------------EEEeCCCC-CCCCCCccCCCCCCccCCCCcchHHHHHHhhee
Q psy10608 380 --------------------------------------VGINVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTET 420 (445)
Q Consensus 380 --------------------------------------V~iN~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~ 420 (445)
|+||+++. ...+.+||||+|.||+|++ .+|.+||++||+.
T Consensus 431 ~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~-~G~~~~l~~~~~~ 509 (516)
T d1uzba_ 431 FAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK-TGALDYLRLFLEM 509 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCC-BTSHHHHHTTEEE
T ss_pred HHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcc-cchHHHHHHhCCe
Confidence 99998643 2346789999999999953 3568999999999
Q ss_pred EEEEeec
Q psy10608 421 KTVTQLW 427 (445)
Q Consensus 421 k~v~~~~ 427 (445)
|+|..+|
T Consensus 510 k~v~~r~ 516 (516)
T d1uzba_ 510 KAVAERF 516 (516)
T ss_dssp EEEEEEC
T ss_pred eeEEEcC
Confidence 9999765
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.4e-79 Score=639.22 Aligned_cols=396 Identities=24% Similarity=0.360 Sum_probs=367.6
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-TWSKTSIITRQQVLFRLQNIIKA 104 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~ 104 (445)
.++.+++||||+|+. ++++++++||+||+.+++++.++.+|+++|+++|++|++ .|+++|..+|.++|+++++.|++
T Consensus 13 ~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~ 90 (499)
T d1ky8a_ 13 GVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIER 90 (499)
T ss_dssp TEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 467789999999995 467899999999999999999999999999999988887 79999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccc----cCCCCceeEEEecCCeEEEECCCCcchh
Q psy10608 105 NMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG----VAKDMDIHSYRVPLGVTAGITPFNFPAM 180 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 180 (445)
++++|++++++|+|||..+++.|+.++++.++|++...+...+..... ...+...+++++|+|||++|+|||||+.
T Consensus 91 ~~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~ 170 (499)
T d1ky8a_ 91 NLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170 (499)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccch
Confidence 999999999999999999999999999999999998877665543221 1223456889999999999999999999
Q ss_pred hhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHH
Q psy10608 181 IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIY 260 (445)
Q Consensus 181 ~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 260 (445)
++++++++||++||+||+|||+.+|.++..+++++.++|+|.++++++.|+.+.+..|+.|+.++.+.||||+.+|+.+.
T Consensus 171 ~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~ 250 (499)
T d1ky8a_ 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVV 250 (499)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEe
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCC
Q psy10608 261 ERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAG 338 (445)
Q Consensus 261 ~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p 338 (445)
+.++ .+++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|
T Consensus 251 ~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v-~V~~~v~d~f~~~l~~~~~~l~~G~p 327 (499)
T d1ky8a_ 251 KVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV-LAERPVYGKLVEEVAKRLSSLRVGDP 327 (499)
T ss_dssp HHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred eccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccc-cccchhHHHHHHHHHHHHHhCccCCC
Confidence 9775 48999999999999999999999999999999999999999999999 7787 59999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce---------------------------------------
Q psy10608 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK--------------------------------------- 379 (445)
Q Consensus 339 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~--------------------------------------- 379 (445)
.|+++++|||++.+++++++++|++|+.+||+++.||....
T Consensus 328 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~ 407 (499)
T d1ky8a_ 328 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDL 407 (499)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccccccccccccccccCCCCChhhhccccCceEEEEEcCCH
Confidence 99999999999999999999999999999999999987421
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
|+||+.+....+.+||||+|+||+| +++|.+|+++||+.|+
T Consensus 408 ~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~ 485 (499)
T d1ky8a_ 408 DQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGYAVEAVTAYKT 485 (499)
T ss_dssp HHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEES--CBSTTTTHHHHEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCC--CCCHHHHHHHhhCEEE
Confidence 9999876555578999999999999 5699999999999999
Q ss_pred EEeecc
Q psy10608 423 VTQLWR 428 (445)
Q Consensus 423 v~~~~~ 428 (445)
|+++|.
T Consensus 486 i~~~~~ 491 (499)
T d1ky8a_ 486 IVFNYK 491 (499)
T ss_dssp EEEECT
T ss_pred EEEcCC
Confidence 999875
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2e-73 Score=591.31 Aligned_cols=392 Identities=26% Similarity=0.407 Sum_probs=356.1
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
++++|||||+|+.+ +++++++||+||+.+++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|+++++
T Consensus 2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~ 79 (474)
T d1euha_ 2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKE 79 (474)
T ss_dssp CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 56799999999865 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcc-----ccccCCCCceeEEEecCCeEEEECCCCcchhhh
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET-----LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIP 182 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~-----~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 182 (445)
+|++++++|+|||..+++.|+...+..+++++.......... .+....+...+++++|+|||++|+|||||+...
T Consensus 80 ~la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~ 159 (474)
T d1euha_ 80 KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA 159 (474)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhh
Confidence 999999999999999999999999999998876544332211 111223455678899999999999999999999
Q ss_pred HhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 183 LWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 183 ~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|+ .++++.|+.||+|+.|.||||+.+++.+.+
T Consensus 160 ~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~ 239 (474)
T d1euha_ 160 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 239 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred hhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhh
Confidence 9999999999999999999999999999999999999999999999996 678899999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 262 ~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
.++ .+++++|+||+||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +++|++.++++...++.|++.
T Consensus 240 ~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i-~v~~~~~~~~~~~l~~~~~~~~~~~~~ 316 (474)
T d1euha_ 240 MAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRV-LVMESVADELVEKIREKVLALTIGNPE 316 (474)
T ss_dssp HTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEE-EEEHHHHHHHHHHHHHHHHTSCBSCGG
T ss_pred hcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCcccccccc-chhhhhhhhhhHhhhhhhhhccccCcc
Confidence 876 68999999999999999999999999999999999999999999999 7777 699999999999999999988
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------- 379 (445)
+. ..++|++.....+++...+..+...|+..+.++....
T Consensus 317 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~ 395 (474)
T d1euha_ 317 DD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 395 (474)
T ss_dssp GT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHH
T ss_pred cc-cccccccchHHHHHHHHHHHhhhcccccccccCCCCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHH
Confidence 65 4689999999999999999999999988776554210
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||+++.+..+.+||||+|+||+| +++|++|+++||++|+|+++.
T Consensus 396 ~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~~ 473 (474)
T d1euha_ 396 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG--IQGVKYSIEAMTTVKSVVFDI 473 (474)
T ss_dssp HHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccC--ccCHHHHHHHhCcEEEEEEec
Confidence 9999987666678999999999999 569999999999999999763
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.7e-69 Score=552.38 Aligned_cols=367 Identities=20% Similarity=0.262 Sum_probs=318.6
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccc-c
Q psy10608 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIM-Q 146 (445)
Q Consensus 69 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~-~ 146 (445)
|++|+++|++||+.|+.+|.++|.++|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++...... .
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999986 59999999998877543322 1
Q ss_pred Cccc--cccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcc
Q psy10608 147 GETL--AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGV 224 (445)
Q Consensus 147 ~~~~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gv 224 (445)
.... .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++++. +|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTT
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccc
Confidence 1111 11223456788999999999999999999999999999999999999999999999999999998775 89999
Q ss_pred eEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccC
Q psy10608 225 VNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAG 304 (445)
Q Consensus 225 v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~G 304 (445)
++++.|+......+. ++.++.|+||||+.+|+.|++.++++++|+++|||||||+||++|||+|.|++.+++++|.|+|
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~G 239 (446)
T d1ad3a_ 161 YLVVKGGVPETTELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSG 239 (446)
T ss_dssp EEECCCSHHHHHHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTT
T ss_pred cccccccchhhhhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCC
Confidence 999999776666555 5679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce---
Q psy10608 305 QRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK--- 379 (445)
Q Consensus 305 Q~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~--- 379 (445)
|.|++++|+ +||+ +|+|+++|.++++.+ +|+|.++++++||++++.+.+++..++++++..|+....++..+.
T Consensus 240 Q~C~a~~rv-~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~Pt 317 (446)
T d1ad3a_ 240 QTCVAPDYI-LCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSSRYIAPT 317 (446)
T ss_dssp CCTTSCCEE-EECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTSCEEECCCEETTTTEECCE
T ss_pred CccccCCcc-ccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccchhcccceeecCCCCCcCCE
Confidence 999999999 7777 699999999999887 799999999999999999999999999876655544443332110
Q ss_pred ------------------------------------------------------------------EEEeCCCC-CCCCC
Q psy10608 380 ------------------------------------------------------------------VGINVPIP-VPLSM 392 (445)
Q Consensus 380 ------------------------------------------------------------------V~iN~~~~-~~~~~ 392 (445)
|+||++.. ...+.
T Consensus 318 il~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~ 397 (446)
T d1ad3a_ 318 ILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPT 397 (446)
T ss_dssp EECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTT
T ss_pred EEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCC
Confidence 99998643 34578
Q ss_pred CccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccccc--cccccccCCC
Q psy10608 393 FSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD--VTHSKAAVSM 441 (445)
Q Consensus 393 ~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~~--~~~~~~~~~~ 441 (445)
+||||+|+||+| +++|++|+++||+.|+|++++...+ ...++|+|++
T Consensus 398 ~PfGG~k~SG~G--~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~~~ 446 (446)
T d1ad3a_ 398 LPFGGVGNSGMG--AYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSPA 446 (446)
T ss_dssp SCCCCCGGGEEC--CCSTHHHHHHTEEEEEEEECCCCCCCTTGGGSSSCCC
T ss_pred CCccccccceec--cchHHHHHHHHhceeEEEEccCCCCccccccCCCCCC
Confidence 999999999999 5699999999999999998765333 4667887763
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1e-66 Score=543.33 Aligned_cols=324 Identities=19% Similarity=0.287 Sum_probs=280.1
Q ss_pred CCeEEeecCCCCceEE-EeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChH
Q psy10608 44 TDWIDLHNPATNEVVT-RVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLA 122 (445)
Q Consensus 44 ~~~~~~~~P~~g~~i~-~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 122 (445)
+++|+++||+|||.++ .++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|++|+++|++++++|+|||..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 4689999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHccCcccccCcc-c-----c--ccCCCCceeEEEecCCeEEEECCCCcchhhh--HhHHHHHhhc
Q psy10608 123 DAEGDVLRGLQVVEQCCSIPTIMQGET-L-----A--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIP--LWMFPVAIAC 192 (445)
Q Consensus 123 ~a~~ev~~~~~~l~~~a~~~~~~~~~~-~-----~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~--~~~i~~ALaa 192 (445)
+++.|+..+++.++||++..+...+.. + + ........+..++|+|||++|+|||||+.+. .+++++||++
T Consensus 82 ~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaa 161 (504)
T d1ez0a_ 82 RLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAA 161 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHH
Confidence 999999999999999997654432211 1 0 0122345678899999999999999999654 4699999999
Q ss_pred CCEEEEeCCCCChHHHHHHH----HHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 193 GNTHVIKPSERDPGACMMLV----DMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 193 GN~VVlKps~~~p~~~~~l~----~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||+||+|||+.+|.++.++. +++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|.+.+++++
T Consensus 162 GN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~ 241 (504)
T d1ez0a_ 162 GCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241 (504)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred hccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccc
Confidence 99999999999999887665 4556789999999999994 678899999999999999999999999999999988
Q ss_pred CcE--EEeCCCCCeeEecCCCCHHHHH--HHHHHHhhcccCCcccccceEEEecc-c-chHHHHHHHHHHhccccCCCCC
Q psy10608 268 KRV--QSNMGAKNHGVIMSDANRSNTL--NQLVGAAFGAAGQRCMALSTVIFVGE-A-VEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 268 ~~~--~lElGGk~~~iV~~daDl~~a~--~~iv~~~f~~~GQ~C~a~~rvi~V~~-~-~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+++ ++|||||||+||++|||++.|+ +.++.++|.|+||.|++++|++++++ . +.|++.+.+.++. + ++
T Consensus 242 ~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~---~~ 315 (504)
T d1ez0a_ 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q---SP 315 (504)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C---CC
T ss_pred ccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c---cc
Confidence 775 4599999999999999999874 47899999999999999999955655 2 5666766665543 2 35
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 376 (445)
++.+||+++..+.+++ ++.+.++|++++.||.
T Consensus 316 ~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~ 347 (504)
T d1ez0a_ 316 STLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQA 347 (504)
T ss_dssp BCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCC
T ss_pred ccccccchhhhhhhhh---hhhhhhhhhhcccccc
Confidence 7789999998887765 6677788999988875
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.3e-53 Score=430.13 Aligned_cols=353 Identities=14% Similarity=0.114 Sum_probs=268.1
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHH------------HHHHHHH
Q psy10608 67 AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD------------VLRGLQV 134 (445)
Q Consensus 67 ~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e------------v~~~~~~ 134 (445)
+|+++++++|++||+.|+.+|..+|.++|++++++|++|+++|++++++|+||+..++..| +..+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999886554 6678889
Q ss_pred HHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHH
Q psy10608 135 VEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDM 214 (445)
Q Consensus 135 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~ 214 (445)
+++++.......+.... ..........++|+|+++++.|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDS-WVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEE-EECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccc-cccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 99998877666554433 22334567778899999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC----cceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCC-eeEecCCCCH
Q psy10608 215 LTQAGCPP----GVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKN-HGVIMSDANR 288 (445)
Q Consensus 215 l~~aGlP~----gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~-~~iV~~daDl 288 (445)
+.+++.|. ++++.+.+ ..+....+..+ +.+.||||+..++.+.+.++++.+++++|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRL---REYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTC---TTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHhhhhhccccccccccccccchhhhhhcccc---cccCeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccch
Confidence 88775554 44666655 34444555543 3344444444555566666666788888888765 5778899999
Q ss_pred HHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC------------------CCCCCCCC
Q psy10608 289 SNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV------------------PGTDLGPV 348 (445)
Q Consensus 289 ~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~------------------~~~~~Gpl 348 (445)
+.|++.++.++|.| ||.|++++|+ +||+ +|+|+++|.+...+..++++.+ ..-.+||+
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~-~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~FgPv 314 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKL-LVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLI 314 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEE-EEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCCSSE
T ss_pred hhhhhHHHhhhhcC-Cccccccccc-chhHHHHHHHHHHHhHHHHHcCCccccchhhhhhcccceecccccCCceeeeeE
Confidence 99999999999977 9999999999 6676 7999999999988876554321 23457997
Q ss_pred CCHHHHHHHHHHHHHHHHc--C--CEEEeCCcc--------c---eEEEeCCCCCCCCCCccCCCCCCcc--CCCCcchH
Q psy10608 349 ISPQAKERILSLIQSGVDE--G--ATLLLDGRN--------L---KVGINVPIPVPLSMFSFTGSRGSFL--GENHFYGK 411 (445)
Q Consensus 349 i~~~~~~~v~~~i~~a~~~--G--a~~~~GG~~--------~---~V~iN~~~~~~~~~~pfGG~k~SG~--G~~~~~g~ 411 (445)
+.--.++.+++.|+.+-+. | +-+.+.-.. . .|+||+++.+. +..|||+.+.||+ |+.+.+|+
T Consensus 315 l~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~-~~~~~g~g~~~G~~~~~~~~~G~ 393 (414)
T d1o20a_ 315 IAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFT-DGGQFGFGAEIGISTQRFHARGP 393 (414)
T ss_dssp EEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGC-STTTTTCSCCSCEECSSSSCCEE
T ss_pred EEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCC-CCCCCCCCCceeccCCCCCCCch
Confidence 6644444455555555442 3 223322110 0 19999876543 3345555555555 43334599
Q ss_pred HHHHHhheeEEEEee
Q psy10608 412 QGFYFYTETKTVTQL 426 (445)
Q Consensus 412 ~~l~~~~~~k~v~~~ 426 (445)
+|+++||++|+|++.
T Consensus 394 ~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 394 VGLRELTTYKFVVLG 408 (414)
T ss_dssp CCTGGGEEEEEEEEC
T ss_pred hHHHHhCeEEEEEEC
Confidence 999999999999865
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.3e-42 Score=350.56 Aligned_cols=350 Identities=15% Similarity=0.140 Sum_probs=242.9
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH------HhCCChHhh------h-HHHHHHHHH
Q psy10608 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITE------EQGKTLADA------E-GDVLRGLQV 134 (445)
Q Consensus 68 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a------~-~ev~~~~~~ 134 (445)
+++++++.|++|++.|+.++.++|.++|+++++.|++|+++|+++..+ +.|++...- . ..+..+++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 467889999999999999999999999999999999999999886444 445543211 1 135566677
Q ss_pred HHHHccCcccccCcccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHH
Q psy10608 135 VEQCCSIPTIMQGETLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212 (445)
Q Consensus 135 l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~ 212 (445)
++..+.+.+... +... ....+...+..+.|+|||++| |||+| ..++++.++||++||+||+||++.++.++..++
T Consensus 84 l~~i~~~~dpvg-~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELEDPVG-KVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSCCSSS-CEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhccccce-eEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHH
Confidence 776666554432 2211 123456677889999999988 66777 677889999999999999999999999998887
Q ss_pred HHH--------HHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 213 DML--------TQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 213 ~~l--------~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
+++ .++|+|++++++++++.++++.|..|++||+|+||||...++.+.+.+. +|++.++||++|+||++
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd~ 237 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLDE 237 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEECT
T ss_pred HHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeecc
Confidence 766 4679999999999988888999999999999999999999999877653 59999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHh-c--c-------------------------
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEA-L--K------------------------- 334 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~-l--~------------------------- 334 (445)
|||+|.|++.+++++|.++|| |++.+++ +||+ ++.|...+...... . +
T Consensus 238 ~ADl~~A~~~i~~ak~~~~g~-C~a~e~l-lV~e~ia~~~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (436)
T d1vlua_ 238 DADLIKAKRISLDAKTNYPAG-CNAMETL-LINPKFSKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC 315 (436)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEE-EECTTSTTHHHHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHT
T ss_pred cccHHHHHHHHHHHhccCCCc-cccccce-eecHhhhhhhhhhHHHHHhCCcEEEeCHHHHHHhhhhhhhcccccccccc
Confidence 999999999999999999996 8899998 7777 46554433332221 1 0
Q ss_pred ----ccCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCC----EEEeCCcc----c-------eEEEeCCCCCCCCCCc
Q psy10608 335 ----VSAGNVP-GTDLGPVISPQAKERILSLIQSGVDEGA----TLLLDGRN----L-------KVGINVPIPVPLSMFS 394 (445)
Q Consensus 335 ----vG~p~~~-~~~~Gpli~~~~~~~v~~~i~~a~~~Ga----~~~~GG~~----~-------~V~iN~~~~~~~~~~p 394 (445)
.+.+.|. .-.++|+++-..++.+++.|+.+-+.|- -+++--.. + .|+||+++++. ++.+
T Consensus 316 ~~~~~~~~~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~-Dg~~ 394 (436)
T d1vlua_ 316 KTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFA-DGFR 394 (436)
T ss_dssp TBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGC-C---
T ss_pred cccCCCcccchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccC-CCCc
Confidence 1111121 2347888776666666667766554432 22221110 0 09999999874 3444
Q ss_pred cCCCCCCcc--CCCCcchHHHHHHhheeEEEEee
Q psy10608 395 FTGSRGSFL--GENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 395 fGG~k~SG~--G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||--.+-|+ ++.|.+|+.||+++|..|+++.-
T Consensus 395 ~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g 428 (436)
T d1vlua_ 395 YGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRG 428 (436)
T ss_dssp -------------------CCSGGGEEEEEEEEC
T ss_pred ccCcceeeEecCCCCCCCCcChHHhceEEEEEEC
Confidence 542223333 55467899999999999999853
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=90.32 E-value=7.3 Score=36.48 Aligned_cols=225 Identities=12% Similarity=0.117 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----h-------Hhhh--------HHHHHHHHHHHHHccCcccccCcc
Q psy10608 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKT----L-------ADAE--------GDVLRGLQVVEQCCSIPTIMQGET 149 (445)
Q Consensus 89 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~----~-------~~a~--------~ev~~~~~~l~~~a~~~~~~~~~~ 149 (445)
++-.+..+++.+.++++.|.-....++...+- + .+|. ..+..+++.++.|...... ....
T Consensus 27 ~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~-~~~~ 105 (431)
T d1k75a_ 27 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKL-PPVD 105 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCC-CCEE
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcC-CCce
Confidence 34445567777778888887777777766432 1 1111 1233444444444322111 1111
Q ss_pred ccccCCCCceeEEEecCCeEEEECCCC-cch-hhhHhHHHHHhhcCCEE--EEeCCCCChHHHHHHHHHHHHcCCCCcce
Q psy10608 150 LAGVAKDMDIHSYRVPLGVTAGITPFN-FPA-MIPLWMFPVAIACGNTH--VIKPSERDPGACMMLVDMLTQAGCPPGVV 225 (445)
Q Consensus 150 ~~~~~~~~~~~~~~~P~GVv~~I~p~N-~P~-~~~~~~i~~ALaaGN~V--VlKps~~~p~~~~~l~~~l~~aGlP~gvv 225 (445)
.. ..++......+.|+--|++..|.- +|+ .++++.++||-.+|+.= +.-|+...|.+ | -..+.+|.-
T Consensus 106 ~e-~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM~aiPAkvAGV~~Ivv~tPp~~~~~~---l-~aa~~~Gv~---- 176 (431)
T d1k75a_ 106 VE-TQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEI---L-YAAQLCGVQ---- 176 (431)
T ss_dssp EE-EETTEEEEEEEEECSEEEEECCCSSSCCHHHHHHHHHHHHHHTCSEEEEEECSSCCHHH---H-HHHHHTTCC----
T ss_pred ee-ccCCceeeeeeeehhhheeeccCCCccchHHHHHHHHHHHhcCCCceeEEeCCCCcchH---H-HHHHHcCcc----
Confidence 11 234556677889999999999964 343 33556689999999764 45666555532 2 223445543
Q ss_pred EEEe-CChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEe-CCCCCe--eEecCCCCHHHHHHHHHH
Q psy10608 226 NVIH-GAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSN-MGAKNH--GVIMSDANRSNTLNQLVG 297 (445)
Q Consensus 226 ~vv~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lE-lGGk~~--~iV~~daDl~~a~~~iv~ 297 (445)
.+.. |+.....+|. .-|+||+|+=.|+.-+..+=..-.... ..+-.. +-|.+= +|-++++|.+.++.+++.
T Consensus 177 ~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~-~~vgID~~aGPSEv~viAD~~a~p~~iAaDlla 255 (431)
T d1k75a_ 177 DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLS 255 (431)
T ss_dssp EEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHST-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHH
T ss_pred ceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccC-CccccccccCCceEEEEecCCCCHHHHHHHHHh
Confidence 3333 4444445554 367899999999986654322222211 112111 234443 333456899999999887
Q ss_pred HhhcccCCcccccceEEEecccchHHHHHHHHH
Q psy10608 298 AAFGAAGQRCMALSTVIFVGEAVEWLPELKKRA 330 (445)
Q Consensus 298 ~~f~~~GQ~C~a~~rvi~V~~~~~f~~~l~~~~ 330 (445)
-+=+...-. -+ ++..+.++.+++.+.+
T Consensus 256 QAEH~~~a~-----~i-lvt~~~~l~~~v~~~i 282 (431)
T d1k75a_ 256 QAEHGPDSQ-----VI-LLTPAADMARRVAEAV 282 (431)
T ss_dssp HHTTCTTCE-----EE-EEESCHHHHHHHHHHH
T ss_pred ccCCcccce-----eE-EEeccHHHHHHHHHHH
Confidence 766554422 23 5555445555544444
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