Psyllid ID: psy10614

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70
Protein Sequence
MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNISK
Secondary Structure (PSIPRED)
ccEEEEEEccEEEEEEccccccHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mdihsyrvplgvtagitpfnfpamiplwmFPVAiacgnthvikpsvfqssfvtSTKYFKVVmshppnisk
Flexible Loop (DISEMBL)
MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVvmshppnisk
Low Complexity Region (SEG)
MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNISK
Disordered region (IsUnstruct)
****SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM********
Disordered Region (DISOPRED)
*DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI**
Disordered Region (DISEMBL)
MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNISK
Disordered Region (DISPRO)
MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHP*****
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNISK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	70	2.2.26 [Sep-21-2011]
P52713	523	Probable methylmalonate-s	yes	N/A	0.642	0.086	0.866	9e-18
Q7QC84	521	Probable methylmalonate-s	yes	N/A	0.642	0.086	0.822	1e-16
Q17M80	521	Probable methylmalonate-s	N/A	N/A	0.642	0.086	0.822	1e-16
Q54I10	528	Probable methylmalonate-s	yes	N/A	0.642	0.085	0.822	5e-16
Q02253	535	Methylmalonate-semialdehy	yes	N/A	0.642	0.084	0.755	7e-16
Q9EQ20	535	Methylmalonate-semialdehy	yes	N/A	0.642	0.084	0.755	7e-16
Q07536	537	Methylmalonate-semialdehy	yes	N/A	0.642	0.083	0.755	7e-16
Q02252	535	Methylmalonate-semialdehy	yes	N/A	0.642	0.084	0.755	8e-16
Q5KYK0	484	Methylmalonate semialdehy	yes	N/A	0.628	0.090	0.760	4e-15
Q65IX1	484	Methylmalonate semialdehy	yes	N/A	0.571	0.082	0.8	5e-15

>sp|P52713|MMSA_CAEEL Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=1 SV=1

 Score = 88.6 bits (218), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD HSYR+PLGVTAGI PFNFPAMIPLWMFPVA+A GNT VIKPS
Sbjct: 157 MDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPS 201

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.
Caenorhabditis elegans (taxid: 6239)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 7

>sp|Q7QC84|MMSA_ANOGA Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/45 (82%), Positives = 40/45 (88%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPS
Sbjct: 154 MDTYSYHLPLGVTAGIAPFNFPAMIPLWMFPVAITCGNTSIIKPS 198

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Anopheles gambiae (taxid: 7165)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q17M80|MMSA_AEDAE Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/45 (82%), Positives = 40/45 (88%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPS
Sbjct: 154 MDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPS 198

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Aedes aegypti (taxid: 7159)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q54I10|MMSA_DICDI Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/45 (82%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +DI+SY  PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPS
Sbjct: 157 VDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPS 201

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q02253|MMSA_RAT Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q9EQ20|MMSA_MOUSE Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q07536|MMSA_BOVIN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 169 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 213

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q02252|MMSA_HUMAN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211

Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q5KYK0|IOLA3_GEOKA Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Geobacillus kaustophilus (strain HTA426) GN=iolA3 PE=3 SV=2

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 2/46 (4%)

Query: 2   DIHS--YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           DI S  YR PLGV AGITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 133 DIESGMYRYPLGVVAGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 178

Converts malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.

Geobacillus kaustophilus (strain HTA426) (taxid: 235909)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q65IX1|IOLA1_BACLD Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolA1 PE=3 SV=1

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/40 (80%), Positives = 36/40 (90%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +R PLGV AGITPFNFP M+PLWMFP+AIACGNT V+KPS
Sbjct: 141 WRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLKPS 180

Converts malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.

Bacillus licheniformis (strain DSM 13 / ATCC 14580) (taxid: 279010)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
358336956	456	methylmalonate-semialdehyde dehydrogenas	0.642	0.098	0.911	3e-18
193605836	522	PREDICTED: probable methylmalonate-semia	0.642	0.086	0.911	6e-17
157812982	156	putative methylmalonate-semialdehyde deh	0.642	0.288	0.888	8e-17
443694279	522	hypothetical protein CAPTEDRAFT_157455 [	0.642	0.086	0.822	9e-17
242010445	526	methylmalonate-semialdehyde dehydrogenas	0.642	0.085	0.866	9e-17
262305431	156	methylmalonate semialdehyde dehydrogenas	0.642	0.288	0.888	2e-16
291228470	527	PREDICTED: aldehyde dehydrogenase 6A1-li	0.642	0.085	0.844	2e-16
262305439	156	methylmalonate semialdehyde dehydrogenas	0.642	0.288	0.866	3e-16
195996111	507	expressed hypothetical protein [Trichopl	0.642	0.088	0.822	3e-16
262305419	156	methylmalonate semialdehyde dehydrogenas	0.642	0.288	0.844	3e-16

>gi|358336956|dbj|GAA55402.1| methylmalonate-semialdehyde dehydrogenase [Clonorchis sinensis]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/45 (91%), Positives = 44/45 (97%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD+HSYRVPLGVTAGITPFNFPAMIPLWMFPV+IACGNT V+KPS
Sbjct: 89  MDLHSYRVPLGVTAGITPFNFPAMIPLWMFPVSIACGNTMVLKPS 133

Source: Clonorchis sinensis

Species: Clonorchis sinensis

Genus: Clonorchis

Family: Opisthorchiidae

Order: Opisthorchiida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|193605836|ref|XP_001944025.1| PREDICTED: probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Acyrthosiphon pisum]

 Score = 91.7 bits (226), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 41/45 (91%), Positives = 42/45 (93%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MDIHSYR PLGVTAGI PFNFPAMIPLWMFPVAI+CGNT VIKPS
Sbjct: 155 MDIHSYREPLGVTAGIAPFNFPAMIPLWMFPVAISCGNTFVIKPS 199

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

>gi|157812982|gb|ABV81236.1| putative methylmalonate-semialdehyde dehydrogenase [Cypridopsis vidua]

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 40/45 (88%), Positives = 43/45 (95%)

Query: 1  MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
          MDIHSYRVPLGV AGITPFNFPAMIPLWM+P+AI CGNT+VIKPS
Sbjct: 29 MDIHSYRVPLGVCAGITPFNFPAMIPLWMYPMAIVCGNTYVIKPS 73

Source: Cypridopsis vidua

Species: Cypridopsis vidua

Genus: Cypridopsis

Family: Cyprididae

Order: Podocopida

Class: Ostracoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443694279|gb|ELT95463.1| hypothetical protein CAPTEDRAFT_157455 [Capitella teleta]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/45 (82%), Positives = 42/45 (93%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD  +Y+VPLGVTAGITPFNFPAMIPLWMFP+A+ACGNT V+KPS
Sbjct: 155 MDTMTYKVPLGVTAGITPFNFPAMIPLWMFPIALACGNTSVMKPS 199

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|242010445|ref|XP_002425978.1| methylmalonate-semialdehyde dehydrogenase, putative [Pediculus humanus corporis] gi|212509969|gb|EEB13240.1| methylmalonate-semialdehyde dehydrogenase, putative [Pediculus humanus corporis]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 42/45 (93%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MDIHSYR+PLGV AGI PFNFPAMIPLWMFPVAI CGNT+V+KPS
Sbjct: 152 MDIHSYRLPLGVVAGIAPFNFPAMIPLWMFPVAIVCGNTYVMKPS 196

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|262305431|gb|ACY45308.1| methylmalonate semialdehyde dehydrogenase [Hexagenia limbata]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/45 (88%), Positives = 41/45 (91%)

Query: 1  MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
          MD HSYR PLGV AGITPFNFPAMIPLWMFPVAI CGNT+VIKPS
Sbjct: 29 MDTHSYRTPLGVCAGITPFNFPAMIPLWMFPVAIVCGNTYVIKPS 73

Source: Hexagenia limbata

Species: Hexagenia limbata

Genus: Hexagenia

Family: Ephemeridae

Order: Ephemeroptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291228470|ref|XP_002734184.1| PREDICTED: aldehyde dehydrogenase 6A1-like [Saccoglossus kowalevskii]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/45 (84%), Positives = 42/45 (93%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD++SYR+PLGVTAGITPFNFPAMIPLWMFP+A  CGNT VIKPS
Sbjct: 159 MDLYSYRIPLGVTAGITPFNFPAMIPLWMFPLATVCGNTSVIKPS 203

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|262305439|gb|ACY45312.1| methylmalonate semialdehyde dehydrogenase [Nicoletia meinerti]

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 42/45 (93%)

Query: 1  MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
          MD HSYR+PLGVTAGITPFNFPAMIPLWMFP+A+ CGNT VIKPS
Sbjct: 29 MDTHSYRIPLGVTAGITPFNFPAMIPLWMFPMALVCGNTSVIKPS 73

Source: Nicoletia meinerti

Species: Nicoletia meinerti

Genus: Nicoletia

Family: Nicoletiidae

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195996111|ref|XP_002107924.1| expressed hypothetical protein [Trichoplax adhaerens] gi|190588700|gb|EDV28722.1| expressed hypothetical protein [Trichoplax adhaerens]

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/45 (82%), Positives = 42/45 (93%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           MD ++YR+PLGVTAGITPFNFPAMIPLWMFP+A+ CGNT VIKPS
Sbjct: 140 MDTYTYRIPLGVTAGITPFNFPAMIPLWMFPMALVCGNTSVIKPS 184

Source: Trichoplax adhaerens

Species: Trichoplax adhaerens

Genus: Trichoplax

Phylum: Placozoa

Superkingdom: Eukaryota

>gi|262305419|gb|ACY45302.1| methylmalonate semialdehyde dehydrogenase [Metajapyx subterraneus]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/45 (84%), Positives = 42/45 (93%)

Query: 1  MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
          MD+HSYRVPLGV AGITPFNFPAMIPLWMFP A+ CGNT+V+KPS
Sbjct: 29 MDLHSYRVPLGVCAGITPFNFPAMIPLWMFPTAVVCGNTYVVKPS 73

Source: Metajapyx subterraneus

Species: Metajapyx subterraneus

Genus: Metajapyx

Family: Japygidae

Class: Diplura

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
WB|WBGene00000114	523	alh-8 [Caenorhabditis elegans	0.642	0.086	0.866	1.4e-16
UNIPROTKB|P52713	523	alh-8 "Probable methylmalonate	0.642	0.086	0.866	1.4e-16
UNIPROTKB|Q17M80	521	AAEL001134 "Probable methylmal	0.642	0.086	0.822	6.2e-16
DICTYBASE|DDB_G0289085	528	mmsdh "methylmalonate-semialde	0.642	0.085	0.822	1.7e-15
UNIPROTKB|F1PBE6	501	ALDH6A1 "Uncharacterized prote	0.642	0.089	0.755	3.2e-15
UNIPROTKB|J3KNU8	522	ALDH6A1 "Methylmalonate-semial	0.642	0.086	0.755	3.5e-15
UNIPROTKB|J9P2I9	533	ALDH6A1 "Uncharacterized prote	0.642	0.084	0.755	3.7e-15
UNIPROTKB|F1S3H1	534	ALDH6A1 "Uncharacterized prote	0.642	0.084	0.755	3.7e-15
UNIPROTKB|Q02252	535	ALDH6A1 "Methylmalonate-semial	0.642	0.084	0.755	3.7e-15
MGI|MGI:1915077	535	Aldh6a1 "aldehyde dehydrogenas	0.642	0.084	0.755	3.7e-15

WB|WBGene00000114 alh-8 [Caenorhabditis elegans (taxid:6239)]

 Score = 213 (80.0 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD HSYR+PLGVTAGI PFNFPAMIPLWMFPVA+A GNT VIKPS
Sbjct:   157 MDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPS 201

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|P52713 alh-8 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Caenorhabditis elegans (taxid:6239)]

 Score = 213 (80.0 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD HSYR+PLGVTAGI PFNFPAMIPLWMFPVA+A GNT VIKPS
Sbjct:   157 MDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPS 201

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISS

GO:0000062 "fatty-acyl-CoA binding" evidence=ISS

GO:0019859 "thymine metabolic process" evidence=ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=ISS

GO:0006573 "valine metabolic process" evidence=ISS

UNIPROTKB|Q17M80 AAEL001134 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Aedes aegypti (taxid:7159)]

 Score = 207 (77.9 bits), Expect = 6.2e-16, P = 6.2e-16
 Identities = 37/45 (82%), Positives = 40/45 (88%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPS
Sbjct:   154 MDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPS 198

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISS

GO:0006573 "valine metabolic process" evidence=ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=ISS

GO:0019859 "thymine metabolic process" evidence=ISS

DICTYBASE|DDB_G0289085 mmsdh "methylmalonate-semialdehyde dehydrogenase (acylating)" [Dictyostelium discoideum (taxid:44689)]

 Score = 203 (76.5 bits), Expect = 1.7e-15, P = 1.7e-15
 Identities = 37/45 (82%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             +DI+SY  PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPS
Sbjct:   157 VDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPS 201

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA;ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISS

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1PBE6 ALDH6A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 200 (75.5 bits), Expect = 3.2e-15, P = 3.2e-15
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct:   165 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 209

GO:0050873 "brown fat cell differentiation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

UNIPROTKB|J3KNU8 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 3.5e-15, P = 3.5e-15
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct:   154 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 198

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

UNIPROTKB|J9P2I9 ALDH6A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 200 (75.5 bits), Expect = 3.7e-15, P = 3.7e-15
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct:   165 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 209

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

UNIPROTKB|F1S3H1 ALDH6A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 200 (75.5 bits), Expect = 3.7e-15, P = 3.7e-15
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct:   166 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 210

GO:0050873 "brown fat cell differentiation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=IEA

UNIPROTKB|Q02252 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 3.7e-15, P = 3.7e-15
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct:   167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211

GO:0050873 "brown fat cell differentiation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA;NAS

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISS

GO:0006573 "valine metabolic process" evidence=ISS

GO:0019859 "thymine metabolic process" evidence=ISS

GO:0000062 "fatty-acyl-CoA binding" evidence=ISS

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0009083 "branched-chain amino acid catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

MGI|MGI:1915077 Aldh6a1 "aldehyde dehydrogenase family 6, subfamily A1" [Mus musculus (taxid:10090)]

 Score = 200 (75.5 bits), Expect = 3.7e-15, P = 3.7e-15
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query:     1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct:   167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211

GO:0004491 "methylmalonate-semialdehyde dehydrogenase (acylating) activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0006210 "thymine catabolic process" evidence=ISO

GO:0006573 "valine metabolic process" evidence=ISO

GO:0006574 "valine catabolic process" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016790 "thiolester hydrolase activity" evidence=ISO

GO:0018478 "malonate-semialdehyde dehydrogenase (acetylating) activity" evidence=ISO

GO:0019484 "beta-alanine catabolic process" evidence=ISO

GO:0019859 "thymine metabolic process" evidence=ISO

GO:0050873 "brown fat cell differentiation" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5KYK0	IOLA3_GEOKA	1, ., 2, ., 1, ., 1, 8	0.7608	0.6285	0.0909	yes	N/A
B7IW48	IOLA_BACC2	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0823	yes	N/A
A5YBJ3	IOLA_LACCA	1, ., 2, ., 1, ., 1, 8	0.6585	0.5857	0.0833	yes	N/A
Q81DR5	IOLA_BACCR	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0823	yes	N/A
Q7KW39	MMSA_DROME	1, ., 2, ., 1, ., 2, 7	0.7333	0.6428	0.0865	yes	N/A
Q8ES27	IOLA1_OCEIH	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0823	yes	N/A
A4IPF5	IOLA2_GEOTN	1, ., 2, ., 1, ., 1, 8	0.8	0.5714	0.0828	yes	N/A
C1KZ99	IOLA_LISMC	1, ., 2, ., 1, ., 1, 8	0.6341	0.5857	0.0840	yes	N/A
Q9EQ20	MMSA_MOUSE	1, ., 2, ., 1, ., 2, 7	0.7555	0.6428	0.0841	yes	N/A
Q29HB2	MMSA_DROPS	1, ., 2, ., 1, ., 2, 7	0.7555	0.6428	0.0865	yes	N/A
Q9KAH5	IOLA_BACHD	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0824	yes	N/A
P52713	MMSA_CAEEL	1, ., 2, ., 1, ., 2, 7	0.8666	0.6428	0.0860	yes	N/A
Q6HIK3	IOLA2_BACHK	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0821	yes	N/A
A8FDV4	IOLA_BACP2	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0823	yes	N/A
Q65IX1	IOLA1_BACLD	1, ., 2, ., 1, ., 1, 8	0.8	0.5714	0.0826	yes	N/A
A0REB5	IOLA2_BACAH	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0821	yes	N/A
Q4V1F6	IOLA3_BACCZ	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0821	yes	N/A
Q738L2	IOLA_BACC1	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0823	yes	N/A
Q7QC84	MMSA_ANOGA	1, ., 2, ., 1, ., 2, 7	0.8222	0.6428	0.0863	yes	N/A
Q02252	MMSA_HUMAN	1, ., 2, ., 1, ., 2, 7	0.7555	0.6428	0.0841	yes	N/A
Q02253	MMSA_RAT	1, ., 2, ., 1, ., 2, 7	0.7555	0.6428	0.0841	yes	N/A
A9VMS6	IOLA2_BACWK	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0828	yes	N/A
Q723T1	IOLA_LISMF	1, ., 2, ., 1, ., 1, 8	0.6341	0.5857	0.0840	yes	N/A
Q92EQ7	IOLA_LISIN	1, ., 2, ., 1, ., 1, 8	0.6341	0.5857	0.0840	yes	N/A
Q8Y9Y4	IOLA_LISMO	1, ., 2, ., 1, ., 1, 8	0.6341	0.5857	0.0840	yes	N/A
Q63B74	IOLA2_BACCZ	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0819	yes	N/A
B7H597	IOLA_BACC4	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0823	yes	N/A
Q81QB6	IOLA2_BACAN	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0821	yes	N/A
A7GPH3	IOLA_BACCN	1, ., 2, ., 1, ., 1, 8	0.8	0.5714	0.0823	yes	N/A
B8DCT8	IOLA_LISMH	1, ., 2, ., 1, ., 1, 8	0.6341	0.5857	0.0840	yes	N/A
B7HR31	IOLA_BACC7	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0823	yes	N/A
Q5WH11	IOLA2_BACSK	1, ., 2, ., 1, ., 1, 8	0.75	0.5714	0.0823	yes	N/A
P42412	IOLA_BACSU	1, ., 2, ., 1, ., 1, 8	0.6585	0.5857	0.0841	yes	N/A
B9IZZ7	IOLA_BACCQ	1, ., 2, ., 1, ., 1, 8	0.775	0.5714	0.0823	yes	N/A
Q07536	MMSA_BOVIN	1, ., 2, ., 1, ., 2, 7	0.7555	0.6428	0.0837	yes	N/A
Q54I10	MMSA_DICDI	1, ., 2, ., 1, ., 2, 7	0.8222	0.6428	0.0852	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	70
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	2e-29
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	7e-25
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	9e-19
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	1e-16
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	9e-16
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-15
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	3e-15
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	8e-15
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	6e-14
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	8e-14
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	1e-13
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	3e-13
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	2e-11
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	5e-11
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	8e-11
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	1e-10
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	2e-10
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	3e-10
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	5e-10
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	6e-10
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	6e-10
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	8e-10
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	9e-10
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-09
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	1e-09
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	2e-09
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	3e-09
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	3e-09
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	3e-09
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	4e-09
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	4e-09
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	7e-09
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	8e-09
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	1e-08
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	1e-08
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	1e-08
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	2e-08
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	2e-08
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	2e-08
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	2e-08
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	3e-08
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	3e-08
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	3e-08
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	3e-08
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	4e-08
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	8e-08
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	1e-07
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-07
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-07
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	3e-07
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	3e-07
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	3e-07
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	3e-07
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	3e-07
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	4e-07
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	4e-07
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	5e-07
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	5e-07
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	6e-07
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	6e-07
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	7e-07
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	1e-06
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	1e-06
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	1e-06
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-06
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	2e-06
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	2e-06
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	2e-06
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	2e-06
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	3e-06
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	4e-06
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	7e-06
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	7e-06
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	2e-05
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	2e-05
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	4e-05
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	5e-05
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	9e-05
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	1e-04
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	1e-04
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	1e-04
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	2e-04
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	3e-04
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	3e-04
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	6e-04
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	6e-04
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	7e-04
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	8e-04
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	0.001
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	0.002
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	0.002
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	0.002
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	0.002
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	0.003
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	0.004
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	0.004

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  107 bits (270), Expect = 2e-29
 Identities = 37/45 (82%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +D +SYR PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPS
Sbjct: 128 IDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPS 172

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 94.6 bits (235), Expect = 7e-25
 Identities = 36/45 (80%), Positives = 41/45 (91%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +D++S R PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPS
Sbjct: 128 VDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPS 172

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 77.9 bits (191), Expect = 9e-19
 Identities = 33/45 (73%), Positives = 38/45 (84%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +D +S R PLGV AGI PFNFPAMIPLWMFPVA+ CGNT ++KPS
Sbjct: 241 VDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPS 285

Length = 604

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score = 71.8 bits (177), Expect = 1e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           + R PLGV   ITP+NFP ++  W    A+A GNT V+KPS
Sbjct: 122 TRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPS 162

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score = 69.2 bits (170), Expect = 9e-16
 Identities = 21/45 (46%), Positives = 26/45 (57%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
                 R PLGV   ITP+NFP ++  W    A+A GNT V+KPS
Sbjct: 88  ELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPS 132

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score = 68.5 bits (168), Expect = 1e-15
 Identities = 21/45 (46%), Positives = 25/45 (55%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
                 R PLGV   ITP+NFP  +  W    A+A GNT V+KPS
Sbjct: 125 SKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPS 169

Length = 472

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score = 67.3 bits (165), Expect = 3e-15
 Identities = 21/45 (46%), Positives = 28/45 (62%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            + +  R PLGV   ITP+NFP ++  W    A+A GNT V+KPS
Sbjct: 84  GEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPS 128

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score = 66.2 bits (162), Expect = 8e-15
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           D  + R P+GV A ITP+NFP  IP W    A+ CGNT V KP+
Sbjct: 128 DAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPA 171

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score = 63.8 bits (156), Expect = 6e-14
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +++ + R PLGV   ITP+NFP  IP W    A+A GNT V KP+
Sbjct: 127 VEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPA 171

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score = 63.4 bits (155), Expect = 8e-14
 Identities = 21/39 (53%), Positives = 24/39 (61%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             PLGV   IT FNFP  +P W   +A+ CGNT V KPS
Sbjct: 131 WNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPS 169

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 62.8 bits (153), Expect = 1e-13
 Identities = 23/41 (56%), Positives = 27/41 (65%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           R P+GV AGI P+NF  MI +W    A+A G T VIKPS F
Sbjct: 140 REPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 21/41 (51%), Positives = 26/41 (63%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           R PLGV A I P+NFP ++  W    A+  GNT V+KPS F
Sbjct: 112 RKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPF 152

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              RVPLGV   I+PFNFP ++ +     A+A GN  V+KP 
Sbjct: 93  MVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPD 134

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score = 55.3 bits (134), Expect = 5e-11
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 2/41 (4%)

Query: 6   YRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPS 45
           ++VP+GV AGI P+NFP  +I   + P A+  GNT VIKPS
Sbjct: 130 FKVPIGVVAGILPWNFPFFLIARKLAP-ALVTGNTIVIKPS 169

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 55.0 bits (133), Expect = 8e-11
 Identities = 23/41 (56%), Positives = 28/41 (68%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           S R PLGV AGITPFN+P ++       A+A GNT V+KPS
Sbjct: 115 SVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPS 155

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 54.6 bits (132), Expect = 1e-10
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV A I P+N+P M+  W    A+A GNT V+KPS
Sbjct: 116 REPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPS 154

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           D  ++  R PLGV A ITP+N P ++       A+A GNT V+KPS
Sbjct: 110 DYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPS 155

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 53.5 bits (129), Expect = 3e-10
 Identities = 21/39 (53%), Positives = 25/39 (64%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   ITPFNFPA +       AIA GN+ V+KPS
Sbjct: 121 REPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPS 159

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 5e-10
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 8   VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV 60
           +PLGV   I+P+NFP  I   M   AI  GNT ++KP+    + V + K+ +V
Sbjct: 170 IPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPA--SDTPVIAAKFVEV 220

Length = 514

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 52.7 bits (127), Expect = 6e-10
 Identities = 22/41 (53%), Positives = 25/41 (60%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           R PLGV AGI  +N+P  I  W    A+ACGN  V KPS F
Sbjct: 114 REPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPF 154

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 52.4 bits (126), Expect = 6e-10
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   I P+NFP M   W    A+A GNT V+KP+
Sbjct: 115 REPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPA 153

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score = 52.1 bits (125), Expect = 8e-10
 Identities = 19/39 (48%), Positives = 22/39 (56%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV  GI  +N+P  I  W    A+A GN  V KPS
Sbjct: 131 REPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPS 169

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 52.0 bits (125), Expect = 9e-10
 Identities = 22/43 (51%), Positives = 27/43 (62%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQS 49
           R P+GV   ITP+NFP +I     P A+A G T V+KPS F S
Sbjct: 117 REPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTS 159

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV A I P+N+P M+  W    A+A GNT V+KPS
Sbjct: 136 RDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPS 174

Length = 475

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV   + P+NFP ++  W    A+A GN+ V+KP+
Sbjct: 122 REPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 20/40 (50%), Positives = 24/40 (60%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            R P+GV A ITPFNFP  +       AIA GN  V+KP+
Sbjct: 120 IREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPA 159

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score = 50.7 bits (122), Expect = 3e-09
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
                PLGV A I+P+NFP  I   M   A+  GNT V+KP+
Sbjct: 161 RYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPA 202

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score = 50.7 bits (122), Expect = 3e-09
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   I P+NFP ++  W    A+A GNT V+KP+
Sbjct: 139 REPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPA 177

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 20/39 (51%), Positives = 25/39 (64%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   ITP+N P M+  W    A+A GNT V+KPS
Sbjct: 115 RQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPS 153

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV A ITP+NFP  + L     A+A GNT V+KP+
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPA 159

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 19/39 (48%), Positives = 23/39 (58%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV AGI  +N+P  I  W    A+A GN  + KPS
Sbjct: 140 REPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPS 178

Length = 488

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 49.6 bits (119), Expect = 7e-09
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 2   DIHSYRV--PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            + S  V  P+GV   ITP+N+P +   W    A+A GNT VIKPS
Sbjct: 125 HVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPS 170

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 49.3 bits (118), Expect = 8e-09
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV   I+P+N P ++  W    A+ACGNT V+KPS
Sbjct: 137 RKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPS 175

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 49.0 bits (117), Expect = 1e-08
 Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 2   DIHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSVF 47
           +I  ++  LGVT GI P+NFP  +I   M P A+  GNT VIKPS F
Sbjct: 64  NILLFKRALGVTTGILPWNFPFFLIARKMAP-ALLTGNTIVIKPSEF 109

Length = 409

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 48.9 bits (117), Expect = 1e-08
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             P GV   I P+N+P  +  W    A+A GNT VIKP+
Sbjct: 142 HEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPA 180

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 3   IHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPS 45
           I   + P+GV A ITP+NFP AMI   + P A+A G T V+KP+
Sbjct: 111 ILVIKQPVGVVAAITPWNFPAAMITRKIAP-ALAAGCTVVLKPA 153

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 48.5 bits (116), Expect = 2e-08
 Identities = 18/40 (45%), Positives = 25/40 (62%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           YR PLGV   I+P+NFP  + +     A+A GN  V+KP+
Sbjct: 127 YREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPA 166

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score = 48.4 bits (116), Expect = 2e-08
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              P GV   I+P+N+P + P+     A+A GN  V+KPS
Sbjct: 116 EYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPS 155

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV A I P+N P  +       A+A G T V+KPS
Sbjct: 135 REPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPS 173

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score = 48.1 bits (115), Expect = 2e-08
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)

Query: 9   PLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPS 45
           P+GV   ITP+NFP AMI   + P A+A G T V+KPS
Sbjct: 160 PVGVVGAITPWNFPLAMITRKVGP-ALAAGCTVVVKPS 196

Length = 498

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 20/39 (51%), Positives = 25/39 (64%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   I P+NFP ++  W    A+A GNT VIKPS
Sbjct: 134 REPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPS 172

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 48.0 bits (114), Expect = 3e-08
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV A I P+NFP ++  W    A+A GN+ ++KPS
Sbjct: 155 REPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPS 193

Length = 494

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQS 49
           P+GV   I P+NFP ++  W    A+A GNT V+KP+ +  
Sbjct: 147 PVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTP 187

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 47.7 bits (113), Expect = 3e-08
 Identities = 20/39 (51%), Positives = 25/39 (64%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV A I P+N+P M+  W    A+A GN  V+KPS
Sbjct: 135 RDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 173

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 47.3 bits (113), Expect = 4e-08
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           PLGV   I P+NFP ++  W    A+A GNT V+KP+
Sbjct: 136 PLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPA 172

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score = 46.6 bits (111), Expect = 8e-08
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P+GV   I P+NFP ++  W    A+ACGNT V+KP+
Sbjct: 145 PVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 44
           RVPLGV   I+PFNFP ++ +     A+A GN  V+KP
Sbjct: 108 RVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKP 145

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 46.0 bits (109), Expect = 1e-07
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           ++ RVP+G    ITP+N P M+  W    A+A GNT V+KP+ +
Sbjct: 130 YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEW 173

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score = 45.8 bits (109), Expect = 1e-07
 Identities = 19/44 (43%), Positives = 25/44 (56%)

Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
                R P+GV   ITP+NFP ++  W    A+A G T V+KPS
Sbjct: 113 KARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPS 156

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 45.2 bits (107), Expect = 3e-07
 Identities = 18/39 (46%), Positives = 24/39 (61%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           P+GV   I P+NFP ++  W    A+A GNT V+KPS  
Sbjct: 144 PIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSEL 182

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 16/39 (41%), Positives = 21/39 (53%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIK 43
           + R PLGV   I P+N P M+       A+  GNT V+K
Sbjct: 113 TVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLK 151

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score = 44.9 bits (107), Expect = 3e-07
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           + R P GVT  I P+N+P  I       A+A GN  V+KP+
Sbjct: 113 TVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPA 153

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 44.9 bits (107), Expect = 3e-07
 Identities = 19/37 (51%), Positives = 22/37 (59%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           PLGV   IT FNFP  +  W   +A+ CGN  V KPS
Sbjct: 132 PLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPS 168

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 44.8 bits (106), Expect = 3e-07
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           PLGV   I P+NFP ++  W    A+A GN  V+KP+
Sbjct: 136 PLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPA 172

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 44.8 bits (106), Expect = 4e-07
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKY 57
           R P+GV   + P+N+P M+  W     +A GNT V+KP+  Q + +T+ K+
Sbjct: 145 REPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPA--QVTPLTALKF 193

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 44.4 bits (105), Expect = 4e-07
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P+GV   I P+NFP ++  W    A+ACGNT V+KP+
Sbjct: 141 PIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPA 177

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score = 44.3 bits (105), Expect = 5e-07
 Identities = 18/39 (46%), Positives = 22/39 (56%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   ITPFNFP  +       AIA G   V+KP+
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPA 159

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 44.5 bits (105), Expect = 5e-07
 Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 2/38 (5%)

Query: 9   PLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPS 45
           P+GVTA ITP+NFP AMI     P A+A G T V+KP+
Sbjct: 146 PIGVTAAITPWNFPAAMITRKAGP-ALAAGCTMVLKPA 182

Length = 482

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 8/44 (18%)

Query: 6   YRVPLGVTAGITPFNFP---AMIPLWMFPV-AIACGNTHVIKPS 45
           Y  P GV   I P+N+P   A+ PL    + AIA GNT V+KPS
Sbjct: 97  YYEPYGVVLIIAPWNYPFQLALAPL----IGAIAAGNTAVLKPS 136

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 18/39 (46%), Positives = 24/39 (61%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           + PLGV   I P+N+P ++ L     AIA G T V+KPS
Sbjct: 106 KEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPS 144

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 43.9 bits (104), Expect = 7e-07
 Identities = 20/43 (46%), Positives = 22/43 (51%)

Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           I + R PLGV   ITPFN P          AIA  N  V+KPS
Sbjct: 114 IFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPS 156

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 43.4 bits (102), Expect = 1e-06
 Identities = 19/44 (43%), Positives = 22/44 (50%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 44
              H YR P G    I  FNFP  IPL     A+A GN  ++KP
Sbjct: 92  QQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKP 135

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R  +GV   ITP+NFP  I L     A+A GNT V+KP+
Sbjct: 139 REAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPA 177

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 43.0 bits (101), Expect = 1e-06
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSH 64
           S+ V LG    I+P+NFP  I   M    +A GNT + KP+  + + V   K F++    
Sbjct: 150 SFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPA--EDAVVVGYKVFEIFHEA 207

Query: 65  --PPNI 68
             PP +
Sbjct: 208 GFPPGV 213

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)

Query: 7   RVPLGVTAGITPFNFPA-MIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   ITP+N+P   I L + P A+A G T V+KPS
Sbjct: 128 REPIGVCGLITPWNWPLNQIVLKVAP-ALAAGCTVVLKPS 166

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 42.8 bits (101), Expect = 2e-06
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             +  + PLGV   ITP+N+P ++  W    A+A G T V+KPS
Sbjct: 144 KGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPS 187

Length = 503

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPS 45
           R P+G  + ITPFNFP  + L    V  AIA G   V+KP+
Sbjct: 121 RFPIGPVSAITPFNFP--LNLVAHKVAPAIAAGCPFVLKPA 159

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 42.5 bits (100), Expect = 2e-06
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIK 43
           P+GV   I P+NFP ++  W    A+ACGNT V+K
Sbjct: 195 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 229

Length = 538

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            + P+GV  GI P+N P ++        +A GNT V+K S
Sbjct: 95  VKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKAS 134

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 8/41 (19%)

Query: 9   PLGVTAGITPFNFP---AMIPLWMFPV-AIACGNTHVIKPS 45
           PLGV   I P+N+P   A+ PL    + AIA GNT V+KPS
Sbjct: 100 PLGVVLIIGPWNYPLQLALAPL----IGAIAAGNTVVLKPS 136

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 41.6 bits (98), Expect = 4e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 7   RVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPSVFQSSFV 52
           + P+GV A ITP+NFP AMI       A+A G T V+KP+  Q+   
Sbjct: 115 KQPVGVCAAITPWNFPAAMITRKAGA-ALAAGCTVVVKPA-EQTPLS 159

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 41.2 bits (97), Expect = 7e-06
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSV 46
           PLGV   I  +N+P  + L     AIA GNT V+KPS 
Sbjct: 109 PLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSE 146

Length = 493

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 12/48 (25%)

Query: 6   YRVPLGVTAGITPFNFP------AMIPLWMFPVAIACGNTHVIKPSVF 47
            R PLGV   I PFN+P       +IP      A+  GNT V KP+  
Sbjct: 138 RREPLGVVLAIGPFNYPLNLTVSKLIP------ALIMGNTVVFKPATQ 179

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 39.8 bits (93), Expect = 2e-05
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 8   VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            P GVT  I+P+NFP  I + M    I  GN  V+KP+
Sbjct: 166 TPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPA 203

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV   I P+N+P +  +     A+  GN  ++K S
Sbjct: 114 REPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHS 152

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            +R P GV A   PFNFP  +P      A+  GNT V KPS
Sbjct: 94  RHR-PHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPS 133

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 38.6 bits (90), Expect = 5e-05
 Identities = 18/40 (45%), Positives = 21/40 (52%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIK 43
             YR P G  A ITPFNFP  IP      A+  GN  ++K
Sbjct: 137 SGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLK 176

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 38.1 bits (89), Expect = 9e-05
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTST 55
           R P+GV   I P+N P ++ +     A+A G T V+KP+  Q++ + + 
Sbjct: 115 REPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG-QTAQINAA 162

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 17/40 (42%), Positives = 20/40 (50%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 44
           + R P GV A I  FN P M         +A GNT V+KP
Sbjct: 112 TLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKP 151

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 37.5 bits (87), Expect = 1e-04
 Identities = 15/42 (35%), Positives = 25/42 (59%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           ++ + P+GV   I P+NFP+ +       A+A G T V+KP+
Sbjct: 153 YTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPA 194

Length = 501

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPS 45
           D++ Y+ PLGV   I  +N+P  + L + P+  AIA GN  VIKPS
Sbjct: 93  DVYIYKEPLGVVLIIGAWNYP--LQLTLVPLVGAIAAGNCVVIKPS 136

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIK 43
           PLG+   IT FNFP  +  W   +A+ CGN  V K
Sbjct: 154 PLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWK 188

Length = 508

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 6/40 (15%)

Query: 9   PLGVTAGITPFNFP---AMIPLWMFPVAIACGNTHVIKPS 45
           PLGV   I P+N+P   A+ PL     A+A GN  +IKPS
Sbjct: 101 PLGVVGIIVPWNYPLYLALGPL---IAALAAGNRVMIKPS 137

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPS 45
           PLGV   I+ +NFP    L + PV  AIA GN  V+KPS
Sbjct: 101 PLGVVLVISAWNFP--FLLSLEPVIGAIAAGNAVVLKPS 137

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 35.7 bits (83), Expect = 6e-04
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P GV A   P+NFP  +P      A+  GNT V KPS
Sbjct: 134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPS 170

Length = 487

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 35.7 bits (82), Expect = 6e-04
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             GV   I+P+NFP  I       A+A GNT + KP+
Sbjct: 160 SRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPA 196

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 19/51 (37%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAI---------ACGNTHVIKPSVFQSS 50
             GV   I+P         W FP+AI         A GNT + KP+  Q+ 
Sbjct: 167 GRGVFVCISP---------WNFPLAIFTGQIAAALAAGNTVIAKPA-EQTP 207

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 35.1 bits (81), Expect = 8e-04
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 44
           ++PLGV   I PFN+P  + +     A+  GN  V+KP
Sbjct: 156 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKP 193

Length = 496

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 34.9 bits (81), Expect = 0.001
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 12/45 (26%)

Query: 6   YRVPLGVTAGITPFNFPA------MIPLWMFPVAIACGNTHVIKP 44
            R P GV   I+P+N+P        IP      A+  GN  V+KP
Sbjct: 151 LRQPKGVVGVISPWNYPLTLAVSDAIP------ALLAGNAVVLKP 189

Length = 524

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P GV A   P+NFP  +P      A+  GNT V KPS
Sbjct: 132 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPS 168

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 34.4 bits (80), Expect = 0.002
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 10/48 (20%)

Query: 9   PLGVTAGITPFNFPAMIPLW-MFPVAIAC---GNTHVIK--PSVFQSS 50
           PLGV  GI P+NF    P W +F  A      GNT ++K   +V   +
Sbjct: 96  PLGVVLGIMPWNF----PFWQVFRFAAPNLMAGNTVLLKHASNVPGCA 139

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 34.1 bits (79), Expect = 0.002
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 6/40 (15%)

Query: 9   PLGVTAGITPFNFP---AMIPLWMFPVAIACGNTHVIKPS 45
           P GV   I+P+N+P   A  PL     AIA GNT ++KPS
Sbjct: 100 PKGVCLIISPWNYPFNLAFGPL---VSAIAAGNTAILKPS 136

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 44
           PLG    I+P+NFP  I       A+A GN+ + KP
Sbjct: 768 PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKP 803

Length = 1318

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 33.7 bits (78), Expect = 0.003
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 44
               PLG    I+P+NFP  I       A+  GNT + KP
Sbjct: 672 PGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKP 711

Length = 1208

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 33.3 bits (76), Expect = 0.004
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 3   IHSYRVPL-GVTAGITPFNFPA-MIPLWMFPVAIACGNTHVIKPS 45
           + + R PL GV + ITPFN P   +   + P AIA  N  V+KPS
Sbjct: 132 VFTQREPLLGVISAITPFNHPMNQVAHKIAP-AIATNNRMVVKPS 175

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 33.2 bits (76), Expect = 0.004
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 7/52 (13%)

Query: 9   PLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPSVFQ---SSFVTST 55
           PLGV    + +NFP  I L + P+  AIA GN  V+KPS      S+F+ + 
Sbjct: 108 PLGVVLIFSSWNFP--IGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAAN 157

Length = 484

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	70
KOG2450|consensus	501		99.87
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	99.85
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	99.84
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	99.81
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	99.81
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	99.81
KOG2451|consensus	503		99.81
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	99.81
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	99.81
PLN02766	501	coniferyl-aldehyde dehydrogenase	99.8
PLN02467	503	betaine aldehyde dehydrogenase	99.8
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	99.8
PRK10090	409	aldehyde dehydrogenase A; Provisional	99.79
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	99.79
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	99.79
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	99.79
PLN02174	484	aldehyde dehydrogenase family 3 member H1	99.79
PLN02466	538	aldehyde dehydrogenase family 2 member	99.79
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	99.79
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	99.79
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	99.79
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	99.79
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	99.78
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	99.78
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	99.78
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	99.78
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	99.78
PLN02315	508	aldehyde dehydrogenase family 7 member	99.78
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	99.78
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	99.78
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	99.78
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	99.78
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	99.78
PLN02278	498	succinic semialdehyde dehydrogenase	99.78
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	99.78
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	99.78
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	99.78
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	99.78
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	99.78
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	99.78
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	99.78
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	99.78
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	99.77
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	99.77
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	99.77
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	99.77
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	99.77
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	99.77
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	99.77
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	99.77
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	99.77
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	99.77
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	99.77
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	99.77
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	99.77
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	99.77
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	99.77
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	99.77
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	99.76
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	99.76
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	99.76
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	99.76
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	99.76
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	99.76
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	99.76
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	99.76
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	99.76
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	99.76
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	99.76
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	99.76
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	99.76
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	99.76
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	99.75
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	99.75
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	99.75
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	99.75
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	99.75
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	99.75
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	99.75
PRK11809	1318	putA trifunctional transcriptional regulator/proli	99.74
PLN02203	484	aldehyde dehydrogenase	99.74
PRK11903	521	aldehyde dehydrogenase; Provisional	99.74
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	99.74
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	99.74
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	99.74
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	99.74
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	99.74
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	99.74
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	99.74
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	99.74
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	99.74
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	99.74
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	99.74
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	99.73
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	99.73
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	99.73
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	99.73
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	99.73
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	99.73
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	99.72
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	99.72
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	99.72
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	99.72
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	99.72
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	99.72
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	99.71
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	99.71
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	99.71
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	99.71
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	99.71
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	99.7
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	99.7
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	99.7
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	99.7
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	99.69
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	99.69
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	99.69
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	99.69
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	99.68
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	99.66
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	99.64
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	99.63
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	99.62
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	99.61
KOG2456|consensus	477		99.6
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	99.58
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	99.56
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	99.44
KOG2454|consensus	583		99.35
KOG2455|consensus	561		99.24
KOG2453|consensus	507		98.71
KOG2452|consensus	881		98.49
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	97.69
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	97.12
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	93.92
PRK11809	1318	putA trifunctional transcriptional regulator/proli	82.69

>KOG2450|consensus

Probab=99.87  E-value=1.2e-22  Score=144.52  Aligned_cols=67  Identities=30%  Similarity=0.495  Sum_probs=63.2

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .++++++|+|||++|+|||||+.+..||++|||++||++|+||||++|+++.....+.-.+|+|+||
T Consensus       151 ~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GV  217 (501)
T KOG2450|consen  151 FAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGV  217 (501)
T ss_pred             EEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcce
Confidence            5789999999999999999999999999999999999999999999999987777777788999997

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=99.85  E-value=2e-21  Score=138.15  Aligned_cols=67  Identities=33%  Similarity=0.516  Sum_probs=60.5

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..+++++|+||+++|+|||||+.+.++++++||++||+||+||||.||+++.....+...+|+|+||
T Consensus       126 ~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv  192 (472)
T COG1012         126 KALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGV  192 (472)
T ss_pred             ceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCe
Confidence            4588999999999999999999999999999999999999999999999965555555567999986

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=99.84  E-value=6.2e-21  Score=136.13  Aligned_cols=66  Identities=30%  Similarity=0.362  Sum_probs=60.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+.++++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       136 ~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv  201 (489)
T cd07126         136 SSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATD  201 (489)
T ss_pred             eEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCc
Confidence            578999999999999999999999999999999999999999999999976666666667999986

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=99.81  E-value=6.3e-20  Score=129.71  Aligned_cols=66  Identities=18%  Similarity=0.146  Sum_probs=60.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+++|++++....+...+|+|+|+
T Consensus       120 ~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv  185 (462)
T PRK13968        120 AVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGV  185 (462)
T ss_pred             EEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCc
Confidence            478899999999999999999999999999999999999999999999976666666667999986

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=99.81  E-value=5.1e-20  Score=134.19  Aligned_cols=66  Identities=50%  Similarity=0.872  Sum_probs=60.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++++....+...+|+|+|+
T Consensus       243 ~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~Gv  308 (604)
T PLN02419        243 TYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGV  308 (604)
T ss_pred             ceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcce
Confidence            467899999999999999999999999999999999999999999999976666666667999986

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=99.81  E-value=7.1e-20  Score=130.22  Aligned_cols=66  Identities=30%  Similarity=0.426  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.++++++||++||+||+||||.+|+++.....+...+|+|+++
T Consensus       140 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv  205 (482)
T PRK11241        140 LIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGV  205 (482)
T ss_pred             EEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCccc
Confidence            467899999999999999999999999999999999999999999999976555555667999886

>KOG2451|consensus

Probab=99.81  E-value=6.7e-20  Score=128.25  Aligned_cols=66  Identities=30%  Similarity=0.364  Sum_probs=62.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..+.+||+||++.|+|||||..+..+|..+||++||++|+|||+.||+++++...+...+|+|+||
T Consensus       153 ~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv  218 (503)
T KOG2451|consen  153 LIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGV  218 (503)
T ss_pred             EEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcc
Confidence            467899999999999999999999999999999999999999999999988888888889999987

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.81  E-value=1e-19  Score=128.49  Aligned_cols=66  Identities=20%  Similarity=0.221  Sum_probs=59.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+++..+++++||++||+||+|||+.+|+++.....+...+|+|+|+
T Consensus       117 ~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gv  182 (457)
T PRK09406        117 AYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGC  182 (457)
T ss_pred             EEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCc
Confidence            467899999999999999999999999999999999999999999999976555555557999986

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=99.81  E-value=8.8e-20  Score=128.79  Aligned_cols=64  Identities=19%  Similarity=0.295  Sum_probs=56.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH------HhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV------VMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~------~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+||||++|+++.  .+.++      .+|+|+|+
T Consensus        89 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~--~l~~l~~~~l~~aG~P~gv  158 (439)
T cd07081          89 TLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQ--RAATLLLQAAVAAGAPENL  158 (439)
T ss_pred             eEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHH--HHHHHHHHHHHHcCCChhh
Confidence            368899999999999999999999999999999999999999999999953  44443      35999886

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=99.80  E-value=1.2e-19  Score=129.43  Aligned_cols=66  Identities=24%  Similarity=0.356  Sum_probs=59.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+|+
T Consensus       152 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gv  217 (501)
T PLN02766        152 GYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGV  217 (501)
T ss_pred             EEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCc
Confidence            467899999999999999999999999999999999999999999999976555555557999986

>PLN02467 betaine aldehyde dehydrogenase

Probab=99.80  E-value=1.7e-19  Score=128.79  Aligned_cols=66  Identities=32%  Similarity=0.504  Sum_probs=60.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|.+++....+...+|+|+|+
T Consensus       145 ~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gv  210 (503)
T PLN02467        145 GYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGV  210 (503)
T ss_pred             eEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCe
Confidence            467899999999999999999999999999999999999999999999976666666667999886

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=99.80  E-value=2.2e-19  Score=127.14  Aligned_cols=66  Identities=36%  Similarity=0.587  Sum_probs=59.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       136 ~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gv  201 (477)
T cd07113         136 AFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGV  201 (477)
T ss_pred             EEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCc
Confidence            467899999999999999999999999999999999999999999999966555555557999986

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=99.79  E-value=2.9e-19  Score=125.03  Aligned_cols=66  Identities=33%  Similarity=0.492  Sum_probs=59.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.+++....+...+|+|+++
T Consensus        65 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv  130 (409)
T PRK10090         65 ILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGV  130 (409)
T ss_pred             eEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCccc
Confidence            567899999999999999999999999999999999999999999999976666555667999886

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=99.79  E-value=2.7e-19  Score=127.32  Aligned_cols=66  Identities=27%  Similarity=0.506  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.+++....+...+|+|+|+
T Consensus       141 ~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv  206 (486)
T cd07140         141 TLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGV  206 (486)
T ss_pred             EEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCc
Confidence            467899999999999999999999999999999999999999999999976666555567999986

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=99.79  E-value=2.9e-19  Score=126.95  Aligned_cols=66  Identities=29%  Similarity=0.344  Sum_probs=59.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       128 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gv  193 (487)
T PRK09457        128 AVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGV  193 (487)
T ss_pred             eEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCe
Confidence            468899999999999999999999999999999999999999999999966555555567999986

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=99.79  E-value=3.2e-19  Score=126.22  Aligned_cols=66  Identities=29%  Similarity=0.527  Sum_probs=59.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       135 ~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gv  200 (476)
T cd07142         135 VYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGV  200 (476)
T ss_pred             EEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCccc
Confidence            467899999999999999999999999999999999999999999999976555555567999886

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=99.79  E-value=2.9e-19  Score=127.50  Aligned_cols=64  Identities=25%  Similarity=0.322  Sum_probs=56.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..  +.+++. ++|+++
T Consensus       106 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~--l~~l~~~~lp~gv  170 (484)
T PLN02174        106 AEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSAL--LAKLLEQYLDSSA  170 (484)
T ss_pred             eEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHH--HHHHHHHhCCCCE
Confidence            5789999999999999999999999999999999999999999999999544  444432 688875

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=99.79  E-value=3.4e-19  Score=128.28  Aligned_cols=66  Identities=29%  Similarity=0.534  Sum_probs=60.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|++++....+...+|+|+|+
T Consensus       189 ~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gv  254 (538)
T PLN02466        189 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGV  254 (538)
T ss_pred             EEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCccc
Confidence            468899999999999999999999999999999999999999999999976666666667999986

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=99.79  E-value=3.7e-19  Score=126.67  Aligned_cols=66  Identities=29%  Similarity=0.343  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       148 ~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gv  213 (500)
T cd07083         148 NESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGV  213 (500)
T ss_pred             EEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCc
Confidence            467899999999999999999999999999999999999999999999976666555567999886

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=99.79  E-value=4.5e-19  Score=125.77  Aligned_cols=66  Identities=29%  Similarity=0.352  Sum_probs=59.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++.+||++||+||+||||.+|+++.....+...+|+|+++
T Consensus       126 ~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gv  191 (484)
T TIGR03240       126 AVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGV  191 (484)
T ss_pred             eEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCccc
Confidence            467899999999999999999999999999999999999999999999976655555567999986

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=99.79  E-value=3e-19  Score=125.63  Aligned_cols=64  Identities=22%  Similarity=0.223  Sum_probs=56.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH------HhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV------VMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~------~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++  ..+.++      .+|+|+++
T Consensus        91 ~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~--~~l~~l~~~~~~~aGlP~gv  160 (429)
T cd07121          91 TLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVS--AYAVELINKAIAEAGGPDNL  160 (429)
T ss_pred             eEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHH--HHHHHHHHHHHHHcCCCcce
Confidence            36789999999999999999999999999999999999999999999995  444443      36899886

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=99.79  E-value=4.6e-19  Score=125.55  Aligned_cols=66  Identities=33%  Similarity=0.515  Sum_probs=59.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++.++|++||+||+|||+.+|.++.....+...+|+|+|+
T Consensus       133 ~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~  198 (481)
T TIGR03216       133 NYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGV  198 (481)
T ss_pred             eEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCc
Confidence            357899999999999999999999999999999999999999999999976666666667999886

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.78  E-value=5.2e-19  Score=124.60  Aligned_cols=66  Identities=23%  Similarity=0.304  Sum_probs=58.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       118 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv  183 (455)
T cd07148         118 AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGW  183 (455)
T ss_pred             EEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCc
Confidence            467899999999999999999999999999999999999999999999966555555556999986

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=99.78  E-value=6.4e-19  Score=123.34  Aligned_cols=66  Identities=23%  Similarity=0.304  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++.+||++||+||+|||+.+|+++..+..+...+|+|+++
T Consensus        90 ~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv  155 (429)
T cd07100          90 AYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV  155 (429)
T ss_pred             EEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence            567899999999999999999999999999999999999999999999976666666667999986

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=99.78  E-value=6.4e-19  Score=126.34  Aligned_cols=66  Identities=24%  Similarity=0.276  Sum_probs=59.1

Q ss_pred             eeeEeee-ccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc-CCCCC
Q psy10614          3 IHSYRVP-LGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS-HPPNI   68 (70)
Q Consensus         3 ~~~~~~P-~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g-~p~~v   68 (70)
                      .+++++| +||+++|+|||||+.+..+++++||++||+||+||||++|++++....+...+| +|+|+
T Consensus       137 ~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv  204 (513)
T cd07128         137 GQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGA  204 (513)
T ss_pred             ceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCc
Confidence            3577999 599999999999999999999999999999999999999999766666666778 89886

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=99.78  E-value=6.6e-19  Score=125.75  Aligned_cols=66  Identities=27%  Similarity=0.438  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+|+
T Consensus       161 ~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gv  226 (511)
T TIGR01237       161 NRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGV  226 (511)
T ss_pred             eEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCc
Confidence            467899999999999999999999999999999999999999999999976655555567999886

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=99.78  E-value=5.4e-19  Score=124.03  Aligned_cols=66  Identities=30%  Similarity=0.387  Sum_probs=59.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus        91 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~  156 (431)
T cd07095          91 AVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGV  156 (431)
T ss_pred             EEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhH
Confidence            577899999999999999999999999999999999999999999999976655555567899875

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=99.78  E-value=5.4e-19  Score=126.49  Aligned_cols=66  Identities=27%  Similarity=0.384  Sum_probs=56.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhH----HHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTS----TKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~----~~~~~~~~g~p~~v   68 (70)
                      .++.++|+||+++|+|||||+.+..++++++|++||+||+||||++|+++..    ...+...+|+|+++
T Consensus       148 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gv  217 (508)
T PLN02315        148 MMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAI  217 (508)
T ss_pred             eEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCccc
Confidence            3568999999999999999999999999999999999999999999999643    22333446899886

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=99.78  E-value=7.1e-19  Score=125.55  Aligned_cols=66  Identities=32%  Similarity=0.391  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ++++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+|+
T Consensus       160 ~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gv  225 (512)
T cd07124         160 NRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGV  225 (512)
T ss_pred             eEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCc
Confidence            578899999999999999999999999999999999999999999999976666666667999886

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=99.78  E-value=6.5e-19  Score=123.84  Aligned_cols=66  Identities=33%  Similarity=0.528  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....++++++|++||+||+|||+.+|++++....+...+|+|+++
T Consensus       114 ~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gv  179 (456)
T cd07110         114 ARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGV  179 (456)
T ss_pred             eEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCc
Confidence            467899999999999999999999999999999999999999999999976666666667999886

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=99.78  E-value=8.3e-19  Score=125.31  Aligned_cols=66  Identities=29%  Similarity=0.379  Sum_probs=59.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       165 ~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gv  230 (514)
T PRK03137        165 NRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGV  230 (514)
T ss_pred             EEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCc
Confidence            578899999999999999999999999999999999999999999999976666665667999986

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=99.78  E-value=8e-19  Score=122.83  Aligned_cols=66  Identities=24%  Similarity=0.324  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.+||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus        92 ~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv  157 (432)
T cd07105          92 AMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV  157 (432)
T ss_pred             eEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence            467899999999999999999999999999999999999999999999976666665567999986

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=99.78  E-value=7.8e-19  Score=128.86  Aligned_cols=66  Identities=24%  Similarity=0.238  Sum_probs=59.8

Q ss_pred             eeeEeeec-cEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc-CCCCC
Q psy10614          3 IHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS-HPPNI   68 (70)
Q Consensus         3 ~~~~~~P~-Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g-~p~~v   68 (70)
                      .+++++|+ ||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+| +|+|+
T Consensus       137 ~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv  204 (663)
T TIGR02278       137 GRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGS  204 (663)
T ss_pred             eEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCc
Confidence            47899997 99999999999999999999999999999999999999999766666666778 89986

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=99.78  E-value=7.9e-19  Score=125.13  Aligned_cols=66  Identities=29%  Similarity=0.469  Sum_probs=58.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       154 ~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gv  219 (498)
T PLN02278        154 LLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGV  219 (498)
T ss_pred             EEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccc
Confidence            356789999999999999999999999999999999999999999999976655555567899886

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=99.78  E-value=9.1e-19  Score=123.06  Aligned_cols=66  Identities=27%  Similarity=0.344  Sum_probs=60.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+....+++++||++||+||+|||+.+|+++.....+...+|+|+|+
T Consensus       111 ~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv  176 (454)
T cd07109         111 VYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGA  176 (454)
T ss_pred             EEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccc
Confidence            578999999999999999999999999999999999999999999999976666666667999986

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=99.78  E-value=8.4e-19  Score=124.41  Aligned_cols=66  Identities=30%  Similarity=0.482  Sum_probs=59.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.++++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       136 ~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~  201 (488)
T PRK13252        136 VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGV  201 (488)
T ss_pred             EEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCccc
Confidence            467899999999999999999999999999999999999999999999976655555567999876

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=99.78  E-value=6e-19  Score=125.25  Aligned_cols=64  Identities=20%  Similarity=0.249  Sum_probs=56.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH------HhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV------VMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~------~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.++++++||++||+||+|||+.+|.++.  .+.++      .+|+|+++
T Consensus       123 ~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~--~l~~ll~~~l~eaGlP~gv  192 (465)
T PRK15398        123 TLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSL--RAIELLNEAIVAAGGPENL  192 (465)
T ss_pred             eEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHH--HHHHHHHHHHHHcCCCCCe
Confidence            467889999999999999999999999999999999999999999999954  44443      36899885

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=99.78  E-value=7.9e-19  Score=124.63  Aligned_cols=66  Identities=30%  Similarity=0.518  Sum_probs=59.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+++|+++.....+...+|+|+++
T Consensus       138 ~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~  203 (481)
T cd07143         138 TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGV  203 (481)
T ss_pred             EEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCccc
Confidence            467899999999999999999999999999999999999999999999976555555556899886

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=99.78  E-value=8.8e-19  Score=123.42  Aligned_cols=66  Identities=35%  Similarity=0.482  Sum_probs=59.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.++++.+||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       113 ~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~  178 (454)
T cd07118         113 GLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGV  178 (454)
T ss_pred             eeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccc
Confidence            467899999999999999999999999999999999999999999999976655555567899876

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=99.78  E-value=8.3e-19  Score=124.38  Aligned_cols=64  Identities=33%  Similarity=0.555  Sum_probs=56.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++..  +.+++ .++|+|+
T Consensus       131 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~--l~~l~~~~lP~gv  195 (472)
T TIGR03374       131 SMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK--LAELAKDIFPAGV  195 (472)
T ss_pred             EEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHH--HHHHHHHhCCcCe
Confidence            4789999999999999999999999999999999999999999999999544  44443 3688875

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=99.78  E-value=9.8e-19  Score=123.32  Aligned_cols=66  Identities=27%  Similarity=0.299  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       124 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~  189 (466)
T cd07138         124 SLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGV  189 (466)
T ss_pred             EEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCc
Confidence            467899999999999999999999999999999999999999999999976666666667999886

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=99.78  E-value=1e-18  Score=123.55  Aligned_cols=66  Identities=35%  Similarity=0.558  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       129 ~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gv  194 (473)
T cd07097         129 VETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGV  194 (473)
T ss_pred             EEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcc
Confidence            478899999999999999999999999999999999999999999999976666665667999885

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=99.77  E-value=1.2e-18  Score=122.89  Aligned_cols=66  Identities=29%  Similarity=0.354  Sum_probs=60.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       131 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv  196 (471)
T cd07139         131 VLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGV  196 (471)
T ss_pred             EEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCc
Confidence            467899999999999999999999999999999999999999999999977666666667999886

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=99.77  E-value=1e-18  Score=122.89  Aligned_cols=65  Identities=29%  Similarity=0.383  Sum_probs=58.9

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      +.+++|+||+++|+|||||+...+++++++|++||+||+|||+.+|++++....+...+|+|+|+
T Consensus       112 ~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv  176 (448)
T TIGR01780       112 LVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGV  176 (448)
T ss_pred             EEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccc
Confidence            56789999999999999999999999999999999999999999999976666666667999886

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=99.77  E-value=1e-18  Score=123.32  Aligned_cols=66  Identities=27%  Similarity=0.506  Sum_probs=59.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       118 ~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~  183 (462)
T cd07112         118 ALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGV  183 (462)
T ss_pred             EEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCc
Confidence            467999999999999999999999999999999999999999999999976665555567899886

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=99.77  E-value=1e-18  Score=128.31  Aligned_cols=66  Identities=24%  Similarity=0.310  Sum_probs=59.0

Q ss_pred             eeeEeeec-cEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc-CCCCC
Q psy10614          3 IHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS-HPPNI   68 (70)
Q Consensus         3 ~~~~~~P~-Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g-~p~~v   68 (70)
                      .++.++|+ ||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+| +|+|+
T Consensus       141 ~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv  208 (675)
T PRK11563        141 GRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGA  208 (675)
T ss_pred             ceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCc
Confidence            36788997 99999999999999999999999999999999999999999766666666678 89886

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=99.77  E-value=1.1e-18  Score=123.53  Aligned_cols=66  Identities=32%  Similarity=0.483  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       128 ~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv  193 (482)
T cd07119         128 SRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGV  193 (482)
T ss_pred             EEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCc
Confidence            468999999999999999999999999999999999999999999999976555555567999886

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=99.77  E-value=1.1e-18  Score=123.62  Aligned_cols=66  Identities=32%  Similarity=0.382  Sum_probs=58.9

Q ss_pred             eeeEeeec-cEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~-Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+ ||+++|+|||||+.+..+++++||++||+||+|||+++|.++.....+...+|+|+++
T Consensus       132 ~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv  198 (472)
T TIGR03250       132 VFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQM  198 (472)
T ss_pred             EEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCccc
Confidence            36789998 9999999999999999999999999999999999999999976555555567999886

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=99.77  E-value=1.2e-18  Score=122.99  Aligned_cols=66  Identities=30%  Similarity=0.477  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       127 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv  192 (467)
T TIGR01804       127 SYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGV  192 (467)
T ss_pred             EEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCc
Confidence            467899999999999999999999999999999999999999999999976665555567999886

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=99.77  E-value=1.2e-18  Score=123.49  Aligned_cols=66  Identities=29%  Similarity=0.487  Sum_probs=59.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++++||++||+||+|||+.+|+++.....+...+|+|+|+
T Consensus       138 ~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv  203 (484)
T cd07144         138 AYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGV  203 (484)
T ss_pred             EEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCc
Confidence            467899999999999999999999999999999999999999999999976666666667999886

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=99.77  E-value=1.3e-18  Score=123.04  Aligned_cols=66  Identities=56%  Similarity=0.915  Sum_probs=59.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+....+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       130 ~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gv  195 (478)
T cd07085         130 TYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGV  195 (478)
T ss_pred             eEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCc
Confidence            478999999999999999999999999999999999999999999999976666555567999886

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=99.77  E-value=1.4e-18  Score=122.54  Aligned_cols=66  Identities=32%  Similarity=0.401  Sum_probs=58.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.+||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       117 ~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~  182 (459)
T cd07089         117 RVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGV  182 (459)
T ss_pred             eEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccc
Confidence            468999999999999999999999999999999999999999999999965555555557899885

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=99.77  E-value=1.1e-18  Score=123.74  Aligned_cols=66  Identities=30%  Similarity=0.465  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       129 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gv  194 (488)
T TIGR02299       129 NYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGV  194 (488)
T ss_pred             EEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhh
Confidence            467899999999999999999999999999999999999999999999976666666667999886

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=99.77  E-value=1.5e-18  Score=122.02  Aligned_cols=66  Identities=23%  Similarity=0.314  Sum_probs=58.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+...++++.++|++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       112 ~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv  177 (454)
T cd07101         112 TTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDL  177 (454)
T ss_pred             EEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCc
Confidence            477899999999999999999999999999999999999999999999965555555557999886

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=99.77  E-value=1.6e-18  Score=122.72  Aligned_cols=66  Identities=35%  Similarity=0.580  Sum_probs=58.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh----cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM----SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~----g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|.++.....+...+    |+|+++
T Consensus       127 ~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gv  196 (478)
T cd07086         127 LMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGV  196 (478)
T ss_pred             EEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccc
Confidence            467899999999999999999999999999999999999999999999965555555556    899886

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=99.77  E-value=1.5e-18  Score=122.58  Aligned_cols=66  Identities=30%  Similarity=0.511  Sum_probs=59.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.+||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       135 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~  200 (476)
T cd07091         135 AYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGV  200 (476)
T ss_pred             EEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCc
Confidence            468999999999999999999999999999999999999999999999976655555567899885

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=99.77  E-value=1.5e-18  Score=122.96  Aligned_cols=66  Identities=30%  Similarity=0.562  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       139 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gv  204 (481)
T cd07141         139 TYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGV  204 (481)
T ss_pred             EEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccc
Confidence            467899999999999999999999999999999999999999999999976655555567999886

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=99.77  E-value=1e-18  Score=123.37  Aligned_cols=64  Identities=19%  Similarity=0.299  Sum_probs=56.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH------HhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV------VMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~------~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++++||++||+||+|||+.+|+++  ..+.++      .+|+|+++
T Consensus        89 ~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~--~~~~~~~~~~l~eaG~P~g~  158 (436)
T cd07122          89 IVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCS--IEAAKIMREAAVAAGAPEGL  158 (436)
T ss_pred             eEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHH--HHHHHHHHHHHHHcCCCchh
Confidence            46789999999999999999999999999999999999999999999995  443433      46899886

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=99.76  E-value=1.2e-18  Score=126.02  Aligned_cols=64  Identities=20%  Similarity=0.148  Sum_probs=55.1

Q ss_pred             eEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhH----HHHHHHHhcCCCCC
Q psy10614          5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTS----TKYFKVVMSHPPNI   68 (70)
Q Consensus         5 ~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~----~~~~~~~~g~p~~v   68 (70)
                      ++++|+||+++|+|||||+++..++++++|++||+||+||||.+|+++..    ...+...+|+|++|
T Consensus       189 ~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gv  256 (551)
T TIGR02288       189 FTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNL  256 (551)
T ss_pred             EEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhH
Confidence            47899999999999999999999999999999999999999999998541    22334456899886

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=99.76  E-value=2e-18  Score=122.23  Aligned_cols=64  Identities=30%  Similarity=0.614  Sum_probs=55.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++...  .+++. .+|+|+
T Consensus       130 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l--~~l~~~alP~gv  194 (479)
T cd07116         130 AYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVL--MELIGDLLPPGV  194 (479)
T ss_pred             EEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH--HHHHHHHCCcCc
Confidence            46789999999999999999999999999999999999999999999996443  34332 388775

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=99.76  E-value=2e-18  Score=122.40  Aligned_cols=64  Identities=36%  Similarity=0.584  Sum_probs=55.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++..  +.+++ .++|+|+
T Consensus       130 ~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~--l~~~~~~~lP~g~  194 (475)
T cd07117         130 SIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLE--LAKIIQDVLPKGV  194 (475)
T ss_pred             eEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHH--HHHHHHHhCCcCc
Confidence            4678999999999999999999999999999999999999999999999544  33333 2588875

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=99.76  E-value=1.9e-18  Score=121.51  Aligned_cols=66  Identities=35%  Similarity=0.531  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.+||++||+||+|||+++|.++.....+...+|+|+++
T Consensus       110 ~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~  175 (457)
T cd07090         110 AYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGV  175 (457)
T ss_pred             EEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCccc
Confidence            467899999999999999999999999999999999999999999999976666666667999986

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=99.76  E-value=2.4e-18  Score=121.03  Aligned_cols=66  Identities=35%  Similarity=0.487  Sum_probs=58.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++.++|++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       117 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~  182 (456)
T cd07145         117 AFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGV  182 (456)
T ss_pred             eEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCccc
Confidence            357899999999999999999999999999999999999999999999965555555556899886

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=99.76  E-value=2.2e-18  Score=122.02  Aligned_cols=66  Identities=56%  Similarity=0.911  Sum_probs=60.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++.+||++||+||+|||+++|++++....+...+|+|+++
T Consensus       130 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~  195 (477)
T TIGR01722       130 VYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGV  195 (477)
T ss_pred             EEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCe
Confidence            456899999999999999999999999999999999999999999999977666666678999986

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.76  E-value=2.2e-18  Score=122.79  Aligned_cols=66  Identities=29%  Similarity=0.479  Sum_probs=59.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...+++++++|++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       151 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~  216 (494)
T PRK09847        151 AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGV  216 (494)
T ss_pred             eEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCc
Confidence            467999999999999999999999999999999999999999999999976555555567999886

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=99.76  E-value=2.6e-18  Score=121.25  Aligned_cols=66  Identities=29%  Similarity=0.386  Sum_probs=57.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchh-hHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFV-TSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~-~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++ .....+...+|+|+++
T Consensus       124 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gv  190 (465)
T cd07151         124 NRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGV  190 (465)
T ss_pred             eEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccc
Confidence            46789999999999999999999999999999999999999999999985 3344445556899886

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=99.76  E-value=2.6e-18  Score=121.33  Aligned_cols=66  Identities=26%  Similarity=0.355  Sum_probs=58.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.+++++++|++||+||+|||+.+|++++....+... +|+|+++
T Consensus       111 ~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~  177 (455)
T cd07120         111 SLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGV  177 (455)
T ss_pred             EEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccc
Confidence            57899999999999999999999999999999999999999999999996655555555 5899886

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.76  E-value=2.4e-18  Score=123.29  Aligned_cols=66  Identities=23%  Similarity=0.327  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.++|++||+||+|||+.+|.++.....+...+|+|+|+
T Consensus       148 ~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gv  213 (524)
T PRK09407        148 TTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDL  213 (524)
T ss_pred             EEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCccc
Confidence            467899999999999999999999999999999999999999999999976666665667999886

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=99.76  E-value=2.7e-18  Score=122.33  Aligned_cols=65  Identities=25%  Similarity=0.423  Sum_probs=58.2

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      +++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       153 ~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~  217 (496)
T PLN00412        153 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL  217 (496)
T ss_pred             EEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCccc
Confidence            57889999999999999999999999999999999999999999999965555555567999886

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=99.76  E-value=2.8e-18  Score=121.22  Aligned_cols=66  Identities=36%  Similarity=0.593  Sum_probs=59.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.+||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       129 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gv  194 (478)
T cd07131         129 AMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGV  194 (478)
T ss_pred             EEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCc
Confidence            467899999999999999999999999999999999999999999999976666666667899886

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=99.76  E-value=3e-18  Score=120.17  Aligned_cols=66  Identities=36%  Similarity=0.487  Sum_probs=58.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....++++++|++||+||+|||+.+|.++.....+...+|+|+|+
T Consensus       113 ~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~  178 (451)
T cd07150         113 SMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGV  178 (451)
T ss_pred             eEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCc
Confidence            468899999999999999999999999999999999999999999999975555555557999875

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=99.76  E-value=3.2e-18  Score=120.01  Aligned_cols=66  Identities=30%  Similarity=0.430  Sum_probs=57.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchh-hHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFV-TSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~-~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.+||++||+||+|||+++|.++ .....+...+|+|+++
T Consensus       104 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gv  170 (443)
T cd07152         104 SLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGV  170 (443)
T ss_pred             eEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCc
Confidence            46789999999999999999999999999999999999999999999994 3344444557899886

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=99.75  E-value=3.3e-18  Score=120.24  Aligned_cols=66  Identities=30%  Similarity=0.527  Sum_probs=59.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...+++++++|++||+||+|||+++|+++.....+...+|+|+++
T Consensus       111 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~  176 (453)
T cd07115         111 NYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGV  176 (453)
T ss_pred             EEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchh
Confidence            478899999999999999999999999999999999999999999999976655555567899875

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=99.75  E-value=3.9e-18  Score=120.79  Aligned_cols=66  Identities=32%  Similarity=0.430  Sum_probs=56.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHH----HHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYF----KVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~----~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+++|.+++....+    ...+|+|+|+
T Consensus       126 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv  195 (474)
T cd07130         126 MMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAI  195 (474)
T ss_pred             EEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCc
Confidence            36779999999999999999999999999999999999999999999996443322    2356899986

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=99.75  E-value=3.8e-18  Score=121.82  Aligned_cols=64  Identities=31%  Similarity=0.371  Sum_probs=55.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.++++++||++||+||+||||.+|.++  ..+.+++. ++|+++
T Consensus       103 ~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~--~~l~~ll~~~lp~~~  167 (493)
T PTZ00381        103 SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTS--KLMAKLLTKYLDPSY  167 (493)
T ss_pred             eEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHH--HHHHHHHHHhCCcCE
Confidence            57899999999999999999999999999999999999999999999995  44444443 577764

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=99.75  E-value=3.8e-18  Score=121.08  Aligned_cols=64  Identities=30%  Similarity=0.577  Sum_probs=55.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++..  +.+++. ++|+|+
T Consensus       130 ~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~--l~~l~~~~lP~gv  194 (480)
T cd07559         130 SYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILV--LMELIGDLLPKGV  194 (480)
T ss_pred             eEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHH--HHHHHHHhCCcCe
Confidence            4678999999999999999999999999999999999999999999999644  344432 488775

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=99.75  E-value=5.4e-18  Score=119.01  Aligned_cols=66  Identities=27%  Similarity=0.309  Sum_probs=58.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++.++|++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       117 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~  182 (452)
T cd07147         117 GLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGA  182 (452)
T ss_pred             eEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCc
Confidence            357889999999999999999999999999999999999999999999965555555556899886

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=99.75  E-value=6.3e-18  Score=118.54  Aligned_cols=66  Identities=23%  Similarity=0.233  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.++|++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       110 ~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~  175 (452)
T cd07102         110 RYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGV  175 (452)
T ss_pred             EEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCc
Confidence            467899999999999999999999999999999999999999999999976666666667999886

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=99.75  E-value=5.1e-18  Score=119.31  Aligned_cols=64  Identities=30%  Similarity=0.355  Sum_probs=55.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|++++  .+.+++. ++|+++
T Consensus        95 ~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~--~l~~~~~~~~P~gv  159 (432)
T cd07137          95 AEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSA--LLAKLIPEYLDTKA  159 (432)
T ss_pred             eEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHH--HHHHHHHHhCCcCe
Confidence            467899999999999999999999999999999999999999999999954  4444432 588875

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.74  E-value=3.4e-18  Score=132.24  Aligned_cols=64  Identities=25%  Similarity=0.371  Sum_probs=58.2

Q ss_pred             eEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         5 ~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++|+||+++|+|||||+.+..+++++||++||+||+||||+||+++.....+...+|+|+++
T Consensus       764 ~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gv  827 (1318)
T PRK11809        764 DTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGV  827 (1318)
T ss_pred             ceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCe
Confidence            4789999999999999999999999999999999999999999999976666666667999886

>PLN02203 aldehyde dehydrogenase

Probab=99.74  E-value=5.6e-18  Score=120.84  Aligned_cols=64  Identities=27%  Similarity=0.275  Sum_probs=55.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .++.++|+||+++|+|||||+.+.+++++++|++||+||+|||+.+|.++.  .+.+++. ++|+++
T Consensus       102 ~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~--~l~~~~~~~lP~gv  166 (484)
T PLN02203        102 AEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSA--FLAANIPKYLDSKA  166 (484)
T ss_pred             eEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH--HHHHHHHHhCCcCE
Confidence            478999999999999999999999999999999999999999999999954  4444442 588775

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=99.74  E-value=5.5e-18  Score=121.65  Aligned_cols=65  Identities=25%  Similarity=0.237  Sum_probs=56.8

Q ss_pred             eeEeee-ccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc-CCCCC
Q psy10614          4 HSYRVP-LGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS-HPPNI   68 (70)
Q Consensus         4 ~~~~~P-~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g-~p~~v   68 (70)
                      +++++| +||+++|+|||||+.+..+++++||++||+||+|||+.+|.++.........+| +|+|+
T Consensus       142 ~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv  208 (521)
T PRK11903        142 QHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGA  208 (521)
T ss_pred             eEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCc
Confidence            557899 599999999999999999999999999999999999999999655555555667 89886

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=99.74  E-value=5.8e-18  Score=121.74  Aligned_cols=65  Identities=29%  Similarity=0.317  Sum_probs=57.9

Q ss_pred             eeeEeeec-cEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~-Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ++++++|+ ||+++|+|||||+.+..++++++| +||+||+|||+++|+++.....+...+|+|+++
T Consensus       163 ~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gv  228 (533)
T TIGR01236       163 NRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGV  228 (533)
T ss_pred             eEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCc
Confidence            46789999 999999999999999999999999 799999999999999976655555567999986

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=99.74  E-value=4.3e-18  Score=121.03  Aligned_cols=65  Identities=29%  Similarity=0.479  Sum_probs=58.4

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      +..++|+||+++|+|||||+.+.++++++||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       142 ~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gv  206 (480)
T cd07111         142 LAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGV  206 (480)
T ss_pred             cccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCccc
Confidence            45789999999999999999999999999999999999999999999976666565567999886

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=99.74  E-value=6.3e-18  Score=118.88  Aligned_cols=66  Identities=33%  Similarity=0.471  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.+||++||+||+|||+++|+++.....+...+|+|+++
T Consensus       113 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~v  178 (457)
T cd07114         113 NFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV  178 (457)
T ss_pred             EEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCc
Confidence            467999999999999999999999999999999999999999999999976666555667899885

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=99.74  E-value=7.2e-18  Score=118.84  Aligned_cols=66  Identities=33%  Similarity=0.399  Sum_probs=58.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       114 ~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~  179 (451)
T cd07146         114 IFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDM  179 (451)
T ss_pred             EEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccc
Confidence            467899999999999999999999999999999999999999999999976655555567999886

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=99.74  E-value=6.7e-18  Score=121.01  Aligned_cols=65  Identities=25%  Similarity=0.203  Sum_probs=57.9

Q ss_pred             eeeEeeec-cEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~-Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+ ||+++|+|||||+.+..++++++| +||+||+|||+++|+++.....+...+|+|+|+
T Consensus       163 ~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gv  228 (522)
T cd07123         163 NRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGV  228 (522)
T ss_pred             eEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCc
Confidence            46889998 999999999999999999999999 599999999999999976665555667999986

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=99.74  E-value=7e-18  Score=118.84  Aligned_cols=66  Identities=33%  Similarity=0.478  Sum_probs=58.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+...++++.+||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       127 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gv  192 (468)
T cd07088         127 IFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGV  192 (468)
T ss_pred             eEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccc
Confidence            467899999999999999999999999999999999999999999999966555555557899886

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.74  E-value=5.3e-18  Score=129.16  Aligned_cols=67  Identities=25%  Similarity=0.283  Sum_probs=60.2

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .++++++|+||+++|+|||||+.+..+++.++|++||+||+|||+++|+++.....+...+|+|+++
T Consensus       677 ~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gv  743 (1038)
T PRK11904        677 SNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDV  743 (1038)
T ss_pred             eeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcce
Confidence            3567899999999999999999999999999999999999999999999976666666667999886

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=99.74  E-value=7.8e-18  Score=118.50  Aligned_cols=64  Identities=30%  Similarity=0.416  Sum_probs=55.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++++||++||+||+|||+.+|.++..  +.+++ .++|+++
T Consensus       110 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~--l~~~~~~~lP~gv  174 (456)
T cd07107         110 HYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALR--LAELAREVLPPGV  174 (456)
T ss_pred             EEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHH--HHHHHHHhCCcCc
Confidence            4688999999999999999999999999999999999999999999999544  33333 2588875

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=99.74  E-value=9.2e-18  Score=117.76  Aligned_cols=66  Identities=26%  Similarity=0.341  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.+||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       113 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~  178 (453)
T cd07099         113 ATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGV  178 (453)
T ss_pred             eEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCe
Confidence            467899999999999999999999999999999999999999999999976666666667999875

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=99.74  E-value=8e-18  Score=119.05  Aligned_cols=65  Identities=29%  Similarity=0.333  Sum_probs=56.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|.++.....+...+ +|+|+
T Consensus        94 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv  158 (449)
T cd07136          94 SYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY  158 (449)
T ss_pred             eEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence            578999999999999999999999999999999999999999999999965444443333 88875

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.74  E-value=1e-17  Score=118.44  Aligned_cols=65  Identities=34%  Similarity=0.583  Sum_probs=56.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++++||++||+||+|||+.+|.++.....+...+ +|+++
T Consensus       132 ~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv  196 (475)
T PRK13473        132 SMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGV  196 (475)
T ss_pred             eEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCc
Confidence            467899999999999999999999999999999999999999999999965544444445 88776

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=99.73  E-value=1e-17  Score=119.87  Aligned_cols=66  Identities=24%  Similarity=0.243  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.++|++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       161 ~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gv  226 (518)
T cd07125         161 NGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDV  226 (518)
T ss_pred             eEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCc
Confidence            478899999999999999999999999999999999999999999999976666665567999876

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=99.73  E-value=1.3e-17  Score=116.86  Aligned_cols=66  Identities=30%  Similarity=0.408  Sum_probs=58.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+...++++.+||++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       111 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~  176 (451)
T cd07103         111 ILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGV  176 (451)
T ss_pred             eEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCccc
Confidence            467899999999999999999999999999999999999999999999966555555556899885

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=99.73  E-value=1.4e-17  Score=117.02  Aligned_cols=64  Identities=28%  Similarity=0.388  Sum_probs=55.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|.++.  .+.+++. ++|+|+
T Consensus        95 ~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~--~l~~l~~~alP~g~  159 (434)
T cd07133          95 AEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSA--LLAELLAEYFDEDE  159 (434)
T ss_pred             eEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH--HHHHHHHHhCCcCe
Confidence            478899999999999999999999999999999999999999999999954  4444442 478775

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=99.73  E-value=1.5e-17  Score=116.78  Aligned_cols=66  Identities=30%  Similarity=0.402  Sum_probs=58.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.++|++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       117 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~  182 (453)
T cd07094         117 AWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGV  182 (453)
T ss_pred             EEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence            467899999999999999999999999999999999999999999999965555555556899886

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=99.73  E-value=1.7e-17  Score=116.34  Aligned_cols=65  Identities=34%  Similarity=0.540  Sum_probs=56.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+....++++++|++||+||+|||+.+|.++.....+... |+|+++
T Consensus       112 ~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~  176 (450)
T cd07092         112 SMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGV  176 (450)
T ss_pred             eEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCccc
Confidence            46789999999999999999999999999999999999999999999996554444433 899886

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=99.73  E-value=1.8e-17  Score=115.47  Aligned_cols=66  Identities=30%  Similarity=0.404  Sum_probs=56.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcch-hhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSF-VTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~-~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.+||++||+||+|||+.+|.+ +.....+...+|+|+++
T Consensus        92 ~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gv  158 (431)
T cd07104          92 SMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGV  158 (431)
T ss_pred             eEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCccc
Confidence            4678999999999999999999999999999999999999999999987 33344444456899876

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=99.72  E-value=1.4e-17  Score=117.14  Aligned_cols=64  Identities=31%  Similarity=0.421  Sum_probs=55.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .++.++|+||+++|+|||||+...++++.++|++||+||+|||+.+|.++  ..+.+++ .|+|+|+
T Consensus       102 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~--~~l~~l~~~~lP~g~  166 (436)
T cd07135         102 PRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTA--ALLAELVPKYLDPDA  166 (436)
T ss_pred             eEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHH--HHHHHHHHHhCCcCE
Confidence            47899999999999999999999999999999999999999999999995  3444443 2788875

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=99.72  E-value=2.1e-17  Score=116.00  Aligned_cols=66  Identities=33%  Similarity=0.495  Sum_probs=59.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.+||++||+||+|||+.+|++++....+...+|+|+++
T Consensus       111 ~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~  176 (455)
T cd07093         111 NYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGV  176 (455)
T ss_pred             EEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccc
Confidence            467899999999999999999999999999999999999999999999976666665667899886

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=99.72  E-value=1.9e-17  Score=116.69  Aligned_cols=66  Identities=24%  Similarity=0.213  Sum_probs=55.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHH----HHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKY----FKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~----~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....++++++|++||+||+|||+++|++++....    +...+|+|+++
T Consensus       114 ~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gv  183 (465)
T cd07098         114 ARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDL  183 (465)
T ss_pred             eEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCe
Confidence            4678899999999999999999999999999999999999999999999543221    11346999886

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.72  E-value=2.3e-17  Score=115.51  Aligned_cols=66  Identities=32%  Similarity=0.404  Sum_probs=57.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+...++++.++|++||+||+|||+.+|.++.....+...+|+|+++
T Consensus       117 ~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gv  182 (453)
T cd07149         117 GFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGA  182 (453)
T ss_pred             EEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccc
Confidence            367899999999999999999999999999999999999999999999965555555556899876

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=99.72  E-value=1.6e-17  Score=118.66  Aligned_cols=64  Identities=27%  Similarity=0.276  Sum_probs=57.5

Q ss_pred             eEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         5 ~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..++|+||+++|+|||||+.+.+++++++|++||+||+|||+++|+++.....+...+|+|+++
T Consensus       156 ~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gv  219 (500)
T TIGR01238       156 FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGT  219 (500)
T ss_pred             eeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCc
Confidence            4689999999999999999999999999999999999999999999976665555667999886

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=99.72  E-value=2.5e-17  Score=116.00  Aligned_cols=67  Identities=34%  Similarity=0.496  Sum_probs=57.4

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..+++++|+||+++|+|||||+...+++++++|++||+||+|||+.+|.+++....+...+|+|+++
T Consensus       119 ~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gv  185 (462)
T PF00171_consen  119 RNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGV  185 (462)
T ss_dssp             EEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTS
T ss_pred             ccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccchhhcccccccccc
Confidence            3578999999999999999999999999999999999999999999999976666666667999986

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=99.71  E-value=3.4e-17  Score=115.60  Aligned_cols=66  Identities=27%  Similarity=0.341  Sum_probs=58.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....++++++|++||++|+|||+.+|.++.....+...+|+|+++
T Consensus       135 ~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~  200 (473)
T cd07082         135 AQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGV  200 (473)
T ss_pred             eEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccc
Confidence            467899999999999999999999999999999999999999999999965555554456899876

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=99.71  E-value=3.2e-17  Score=115.03  Aligned_cols=64  Identities=38%  Similarity=0.664  Sum_probs=55.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+....+++.+||++||+||+|||+++|.++.  .+.+++ .++|+++
T Consensus       108 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~--~l~~~~~~~lP~g~  172 (446)
T cd07106         108 VELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTL--KLGELAQEVLPPGV  172 (446)
T ss_pred             EEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHH--HHHHHHHHhCCcCe
Confidence            478899999999999999999999999999999999999999999999954  444444 2588775

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=99.71  E-value=3.9e-17  Score=115.08  Aligned_cols=64  Identities=30%  Similarity=0.387  Sum_probs=55.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..++++++|++||+||+|||+.+|.++.  .+.+++ .++|+++
T Consensus        94 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~--~l~~~~~~~lp~gv  158 (443)
T cd07132          94 VYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAK--LLAELIPKYLDKEC  158 (443)
T ss_pred             eEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHH--HHHHHHHHhCCcCe
Confidence            578899999999999999999999999999999999999999999999954  444443 2588775

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=99.71  E-value=4e-17  Score=116.52  Aligned_cols=66  Identities=21%  Similarity=0.325  Sum_probs=56.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHH----HHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTST----KYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~----~~~~~~~g~p~~v   68 (70)
                      .+..++|+||+++|+|||||.....+++.++|++||+||+|||+.+|.++...    ..+...+|+|+++
T Consensus        98 ~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gv  167 (488)
T TIGR02518        98 VIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGA  167 (488)
T ss_pred             eEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCccc
Confidence            46789999999999999999999999999999999999999999999996432    2222346999986

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.71  E-value=2.4e-17  Score=126.95  Aligned_cols=64  Identities=25%  Similarity=0.326  Sum_probs=58.0

Q ss_pred             eEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         5 ~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..++|+||+++|+|||||+.+..++++++|++||+||+|||+++|+++.....+...+|+|+++
T Consensus       672 ~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gv  735 (1208)
T PRK11905        672 PGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDA  735 (1208)
T ss_pred             ceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCccc
Confidence            5688999999999999999999999999999999999999999999976666666667999986

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=99.70  E-value=4.2e-17  Score=115.10  Aligned_cols=65  Identities=22%  Similarity=0.166  Sum_probs=54.2

Q ss_pred             eeEeeeccEEEEEcCCChhhhh--hhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHH----HHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMI--PLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFK----VVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~--~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~----~~~g~p~~v   68 (70)
                      +++++|+||+++|+|||||+.+  ..++++++|++||+||+|||+.+|.++.....+.    ..+|+|+++
T Consensus       100 ~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gv  170 (454)
T cd07129         100 RRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGV  170 (454)
T ss_pred             eEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhh
Confidence            5789999999999999999987  4589999999999999999999999954433322    246899876

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=99.70  E-value=6e-17  Score=114.12  Aligned_cols=66  Identities=33%  Similarity=0.471  Sum_probs=58.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcC-CCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSH-PPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~-p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.++|++||++|+|||+.+|.++.....+...+|+ |+++
T Consensus        94 ~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~  160 (442)
T cd07084          94 SHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED  160 (442)
T ss_pred             ceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence            46789999999999999999999999999999999999999999999996555555555677 8875

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=99.70  E-value=7.6e-17  Score=113.44  Aligned_cols=64  Identities=28%  Similarity=0.402  Sum_probs=54.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .++.++|+||+++|+|||||+...++++.++|++||+||+|||+.+|.++.  .+.+++. ++|+++
T Consensus       111 ~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~--~l~~~~~~~lP~~~  175 (457)
T cd07108         111 TYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVL--LLAEILAQVLPAGV  175 (457)
T ss_pred             EEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH--HHHHHHHHhCCcCc
Confidence            467899999999999999999999999999999999999999999999954  4444432 577765

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=99.70  E-value=5.9e-17  Score=112.54  Aligned_cols=65  Identities=18%  Similarity=0.135  Sum_probs=55.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh---cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM---SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~---g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+. .++++.++|++||++|+|||+.+|+++.....+....   |.|+++
T Consensus        94 ~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~  161 (397)
T cd07077          94 TYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKIL  161 (397)
T ss_pred             eEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCce
Confidence            5789999999999999999999 9999999999999999999999999964433333323   777764

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=99.69  E-value=6.3e-17  Score=119.76  Aligned_cols=63  Identities=19%  Similarity=0.164  Sum_probs=54.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+||| |+.+. +++++||++||+||+||||+||+++.....+...+ +|+++
T Consensus       399 ~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv  461 (718)
T PLN02418        399 LEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTV  461 (718)
T ss_pred             EEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccC
Confidence            467899999999999999 99998 89999999999999999999999965544444445 88885

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=99.69  E-value=5e-17  Score=121.77  Aligned_cols=64  Identities=23%  Similarity=0.290  Sum_probs=56.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH------HhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV------VMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~------~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++.+||++||+||+|||+.+|.++.  .+.++      .+|+|+++
T Consensus       102 ~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~--~~~~l~~~~l~~aG~p~g~  171 (862)
T PRK13805        102 IIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSI--AAAKIVLDAAVAAGAPKDI  171 (862)
T ss_pred             eEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHH--HHHHHHHHHHHHcCcCccc
Confidence            467899999999999999999999999999999999999999999999953  34443      36899886

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=99.69  E-value=7.8e-17  Score=116.56  Aligned_cols=65  Identities=22%  Similarity=0.179  Sum_probs=55.6

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhH----HHHHHHHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTS----TKYFKVVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~----~~~~~~~~g~p~~v   68 (70)
                      +.+++|+||+++|+|||||++..+.+++++|++||+||+|||+.+++++..    ...+...+|+|++|
T Consensus       188 ~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gv  256 (549)
T cd07127         188 TFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNL  256 (549)
T ss_pred             eeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCccc
Confidence            347899999999999999999999999999999999999999999998532    22344456999986

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=99.69  E-value=9.7e-17  Score=112.38  Aligned_cols=64  Identities=33%  Similarity=0.410  Sum_probs=55.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh-cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM-SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~-g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....+++.++|++||+||+|||+.+|+++.  .+.+++. |+|+++
T Consensus        94 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~--~l~~~~~~~~P~gv  158 (426)
T cd07087          94 AYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSA--LLAKLIPKYFDPEA  158 (426)
T ss_pred             eEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHH--HHHHHHHHhCCCCE
Confidence            477899999999999999999999999999999999999999999999954  4444443 688875

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=99.68  E-value=1.3e-16  Score=112.05  Aligned_cols=64  Identities=27%  Similarity=0.349  Sum_probs=54.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc-CCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS-HPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g-~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....++++++|++||+||+|||+.+|.++  ..+.+++.. +|+++
T Consensus        94 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~--~~~~~~~~~a~p~g~  158 (433)
T cd07134          94 SKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTS--AVIAKIIREAFDEDE  158 (433)
T ss_pred             eEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHH--HHHHHHHHHhCCcCE
Confidence            46889999999999999999999999999999999999999999999995  444444432 67664

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=99.66  E-value=1.5e-16  Score=111.32  Aligned_cols=64  Identities=17%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHH----HHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYF----KVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~----~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+||| | ...++++++||++||++|+||||.+|.++.....+    ...+|+|+|+
T Consensus        97 ~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gv  164 (398)
T TIGR00407        97 LERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGA  164 (398)
T ss_pred             EEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhH
Confidence            477899999999999997 6 56778999999999999999999999995443333    2267999876

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=99.64  E-value=5.6e-16  Score=114.65  Aligned_cols=62  Identities=18%  Similarity=0.177  Sum_probs=51.9

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      +.+++|+|||++|+||| |+.+ .+++++||++||++|+||||.+|.++.....+...+ +|+++
T Consensus       392 ~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~  453 (715)
T TIGR01092       392 EKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHV  453 (715)
T ss_pred             EEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCC
Confidence            46899999999999999 9988 589999999999999999999999954444433344 78764

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=99.63  E-value=2.8e-16  Score=114.09  Aligned_cols=64  Identities=27%  Similarity=0.385  Sum_probs=56.9

Q ss_pred             eEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         5 ~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..++|+|++++|+|||||+.+....++.+|++||+|+.||+|+||+.+.....+...+|+|+++
T Consensus       232 ~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~  295 (769)
T COG4230         232 LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGV  295 (769)
T ss_pred             cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhh
Confidence            3578999999999999999999999999999999999999999999975555566667888875

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=99.62  E-value=1.1e-15  Score=106.79  Aligned_cols=64  Identities=19%  Similarity=0.171  Sum_probs=52.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH----HhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV----VMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~----~~g~p~~v   68 (70)
                      .+++++|+|||++|+|| +| .+.++++++||++||+||+||||.+|+++.....+..    .+|+|+|+
T Consensus       103 ~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gv  170 (406)
T cd07079         103 IEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDA  170 (406)
T ss_pred             eeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCccc
Confidence            46789999999999997 56 6788999999999999999999999999544332221    46899886

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=99.61  E-value=1.1e-15  Score=107.13  Aligned_cols=64  Identities=19%  Similarity=0.186  Sum_probs=52.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHH----HHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYF----KVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~----~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+||| | .+.++++++||++||++|+||||++|.++.....+    ...+|+|+|+
T Consensus       109 ~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv  176 (417)
T PRK00197        109 IGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADA  176 (417)
T ss_pred             EEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhh
Confidence            578899999999999987 4 66788999999999999999999999995443222    1256899886

>KOG2456|consensus

Probab=99.60  E-value=9.4e-16  Score=107.83  Aligned_cols=58  Identities=33%  Similarity=0.418  Sum_probs=52.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM   62 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~   62 (70)
                      .+.+.+|.||+++|+|||||+.+.+..+.+|+++||+||+||||.+|.+  +..+++++.
T Consensus        98 ~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~--a~~lakllp  155 (477)
T KOG2456|consen   98 AYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNT--AKLLAKLLP  155 (477)
T ss_pred             eeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhH--HHHHHHHHH
Confidence            4778999999999999999999999999999999999999999999999  555555553

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=99.58  E-value=1e-14  Score=101.40  Aligned_cols=66  Identities=35%  Similarity=0.575  Sum_probs=58.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+...++.+.++|++||++|+|||+.+|.++.....+...+|+|+++
T Consensus        90 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~  155 (432)
T cd07078          90 AIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGV  155 (432)
T ss_pred             EEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCc
Confidence            567899999999999999999999999999999999999999999999966555555556888764

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=99.56  E-value=1.9e-14  Score=98.38  Aligned_cols=66  Identities=35%  Similarity=0.564  Sum_probs=58.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|++++|.|||||+...++.+.++|++||++|+|||+.+|.++.....+...+|.|+++
T Consensus        86 ~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~  151 (367)
T cd06534          86 AYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGV  151 (367)
T ss_pred             eEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCe
Confidence            578899999999999999999999999999999999999999999999976655555556888765

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=99.44  E-value=2.3e-13  Score=95.67  Aligned_cols=57  Identities=19%  Similarity=0.264  Sum_probs=49.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM   62 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~   62 (70)
                      .+++++|+|++++|+|||||+ +.++++..+|++||++|+|||+.+|.++  ..+++.+.
T Consensus       106 ~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~--~~l~~~l~  162 (422)
T cd07080         106 GYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTA--TALLRSLA  162 (422)
T ss_pred             CeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHH--HHHHHHHH
Confidence            467899999999999999999 7899999999999999999999999995  44444443

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>KOG2454|consensus

Probab=99.35  E-value=1.9e-12  Score=91.57  Aligned_cols=50  Identities=30%  Similarity=0.252  Sum_probs=47.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchh
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFV   52 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~   52 (70)
                      +++++||+||+.+|.|||||+...+..+..||.+||.+|+|-||++..+.
T Consensus       182 ~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~  231 (583)
T KOG2454|consen  182 SRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSG  231 (583)
T ss_pred             ceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeeh
Confidence            47899999999999999999999999999999999999999999999994

>KOG2455|consensus

Probab=99.24  E-value=6.3e-12  Score=89.59  Aligned_cols=66  Identities=27%  Similarity=0.218  Sum_probs=58.3

Q ss_pred             ceeeEeeec-cEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~-Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ++..+++|+ |.|.+|+||||.........+|+|+ ||+|+||||....++.+.+..+..++|+|+||
T Consensus       189 ~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssYii~~il~EAGlP~Gv  255 (561)
T KOG2455|consen  189 WNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSYIIYRILREAGLPPGV  255 (561)
T ss_pred             CcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHHHHHHHHHHcCCCccc
Confidence            356788898 9999999999988766677788885 99999999999999988888888899999997

>KOG2453|consensus

Probab=98.71  E-value=1.1e-08  Score=71.73  Aligned_cols=51  Identities=35%  Similarity=0.537  Sum_probs=46.4

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhH
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTS   54 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~   54 (70)
                      ...+.|+|+++.|+.+|||.+..-|.-.-+|.|||.|+|||++++|+++.+
T Consensus       148 leqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiA  198 (507)
T KOG2453|consen  148 LEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIA  198 (507)
T ss_pred             HHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHH
Confidence            346899999999999999999999999999999999999999999999533

>KOG2452|consensus

Probab=98.49  E-value=1.1e-07  Score=69.31  Aligned_cols=36  Identities=28%  Similarity=0.532  Sum_probs=32.9

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACG   37 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~G   37 (70)
                      ++.+++||+|||+.|+|||||+.+..|+.+.+|++.
T Consensus       556 l~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~  591 (881)
T KOG2452|consen  556 LTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ  591 (881)
T ss_pred             ceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999988754

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=97.69  E-value=7.2e-05  Score=58.99  Aligned_cols=45  Identities=18%  Similarity=0.089  Sum_probs=39.4

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCc
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQS   49 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp   49 (70)
                      .+..+.+|.|++++++|||   .....++..+|++||++++||+++++
T Consensus      1071 sN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~ 1115 (1208)
T PRK11905       1071 SNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLA 1115 (1208)
T ss_pred             ceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccH
Confidence            4677889999999999999   34567899999999999999999865

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=97.12  E-value=0.0014  Score=46.43  Aligned_cols=58  Identities=16%  Similarity=0.208  Sum_probs=46.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS   63 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g   63 (70)
                      .+++..|.|+++.|.|-|-|... +..+.-+|.+||..|+|.|...+..  ...+++.+..
T Consensus        81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~--~~~l~~~l~~  138 (399)
T PF05893_consen   81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFL--APALLRSLAE  138 (399)
T ss_pred             chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhH--HHHHHHHHHh
Confidence            35678999999999999999754 4567778889999999999998877  4555555543

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=93.92  E-value=0.23  Score=35.83  Aligned_cols=47  Identities=21%  Similarity=0.207  Sum_probs=34.3

Q ss_pred             eeEeeeccEEEEEc--CCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhH
Q psy10614          4 HSYRVPLGVTAGIT--PFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTS   54 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~--p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~   54 (70)
                      +-.+.|+||++.|-  --|-.    ..-..-+|.+||++|+|-+..+-.+..+
T Consensus       109 ~~~rvPLGVigvIYEsRPnVt----vdaaaLclKsGNAvILRGGsea~~Sn~a  157 (417)
T COG0014         109 YRVRVPLGVIGVIYESRPNVT----VDAAALCLKSGNAVILRGGSEAIHSNAA  157 (417)
T ss_pred             EEEEccceEEEEEEecCCccH----HHHHHHHHhcCCEEEEeCcHHHhhhHHH
Confidence            45788999999884  22332    2334557899999999999888888533

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=82.69  E-value=1.9  Score=35.22  Aligned_cols=43  Identities=9%  Similarity=0.020  Sum_probs=33.4

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF   47 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~   47 (70)
                      .+..+-.|.|.++++.+-.-   .....+..++++||.+++..++.
T Consensus      1180 ~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~ 1222 (1318)
T PRK11809       1180 RNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL 1222 (1318)
T ss_pred             cceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch
Confidence            46678889999999987322   45678889999999998875544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	70
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		2e-13
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		5e-12
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		1e-06
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-06
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-06
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-06
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		2e-06
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-06
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		3e-06
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		6e-06
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		7e-06
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		1e-05
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		1e-05
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		2e-05
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-05
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		4e-05
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		7e-05
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		1e-04
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		1e-04
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		1e-04
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		2e-04
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		2e-04
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		2e-04
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		2e-04
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		2e-04
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		2e-04
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		2e-04
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		2e-04
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-04
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-04
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		2e-04
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-04
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-04
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		3e-04
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		4e-04
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		4e-04
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		4e-04
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		8e-04

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 5   SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +YR P+GV  GI PFNFP M+P WMFP+AIA GNT ++KPS
Sbjct: 137 NYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPS 177

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +D +S R P+G+ AGITPFNFP  IP W F  AIACGN  ++KPS
Sbjct: 154 IDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPS 198

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           ++ R PLGV AGI  +N+P MI  W    A+ACGN  V KPS
Sbjct: 150 YTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +++ R PLGV AGI  +N+P  I LW    A+A GN  + KPS
Sbjct: 136 VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +++ R PLGV AGI  +N+P  I LW    A+A GN  + KPS
Sbjct: 136 VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +++ R PLGV AGI  +N+P  I LW    A+A GN  + KPS
Sbjct: 135 VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 177

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +++ R PLGV AGI  +N+P  I LW    A+A GN  + KPS
Sbjct: 135 VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 177

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +++ R PLGV AGI  +N+P  I LW    A+A GN  + KPS
Sbjct: 136 VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV A I P+N+P M+  W    A+A GN  V+KPS
Sbjct: 157 RDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 195

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSV 46
           YR+PLGV + I+PFNFP  + +     AIA GN+ V KP +
Sbjct: 140 YRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDI 180

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P+GV   I P+NFP ++ LW    A++CGNT V+KP+
Sbjct: 159 PVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P+GV   I P+NFP ++  W    A+ CGNT VIKP+
Sbjct: 157 PIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPA 193

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS 63
           ++ RVP G    ITP+N P M+  W    A+A GNT V+KP+  + S  T+TK  +++  
Sbjct: 157 YTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPA--EWSPFTATKLAEILKE 214
Query: 64  H--PPNI 68
              PP +
Sbjct: 215 ADLPPGV 221

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQS 49
           H  R P+GV   ITP+N+P ++  W    A+A G T V+KPS   S
Sbjct: 163 HLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 208

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-- 61
           H  R PLGV   I+P+N+P ++  W    A+A G T V+KPS   S  VT  ++ +V   
Sbjct: 143 HVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS--VTCLEFGEVCNE 200
Query: 62  MSHPPNI 68
           +  PP +
Sbjct: 201 VGLPPGV 207

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 26/43 (60%)
Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQS 49
           R P+GV   ITP+NFP +I     P AI  G T V+KPS F S
Sbjct: 159 REPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTS 201

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           ++ RVPLGV  GI  +N+P  I  W    A+  GN  V KPS
Sbjct: 145 YTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPS 186

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV 61
           D  S+ VPLG    I P+NFP  I   M    +A GNT + KP+  + + V   K F++ 
Sbjct: 166 DNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPA--EDAVVVGAKVFEIF 223
Query: 62  --MSHPPNI 68
                PP +
Sbjct: 224 HEAGFPPGV 232

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV 61
           D  S+ VPLG    I P+NFP  I   M    +A GNT + KP+  + + V   K F++ 
Sbjct: 166 DNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPA--EDAVVVGAKVFEIF 223
Query: 62  --MSHPPNI 68
                PP +
Sbjct: 224 HEAGFPPGV 232

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV 61
           D  S+ VPLG    I P+NFP  I   M    +A GNT + KP+  + + V   K F++ 
Sbjct: 166 DNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPA--EDAVVVGAKVFEIF 223
Query: 62  --MSHPPNI 68
                PP +
Sbjct: 224 HEAGFPPGV 232

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           H +  P GV A I P+NFP  I + M   AI  GN  V KPS
Sbjct: 661 HYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPS 702

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM 62
           P+GV   + P+N+P M+  W     +A GNT VIKP+  Q + +T+ K+ ++ +
Sbjct: 178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA--QVTPLTALKFAELTL 229

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM 62
           P+GV   + P+N+P M+  W     +A GNT VIKP+  Q + +T+ K+ ++ +
Sbjct: 178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA--QVTPLTALKFAELTL 229

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM 62
           P+GV   + P+N+P M+  W     +A GNT VIKP+  Q + +T+ K+ ++ +
Sbjct: 178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA--QVTPLTALKFAELTL 229

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM 62
           P+GV   + P+N+P M+  W     +A GNT VIKP+  Q + +T+ K+ ++ +
Sbjct: 178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA--QVTPLTALKFAELTL 229

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM 62
           P+GV   + P+N+P M+  W     +A GNT VIKP+  Q + +T+ K+ ++ +
Sbjct: 178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA--QVTPLTALKFAELTL 229

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM 62
           P+GV   + P+N+P M+  W     +A GNT VIKP+  Q + +T+ K+ ++ +
Sbjct: 178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA--QVTPLTALKFAELTL 229

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GVTA ITP+NFPA +       A+A G T +++P+
Sbjct: 166 RQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPA 204

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           +I  ++  LGVT GI P+NFP  +       A+  GNT VIKPS F
Sbjct: 135 NILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           +I  ++  LGVT GI P+NFP  +       A+  GNT VIKPS F
Sbjct: 135 NILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVF 47
           +I  ++  LGVT GI P+NFP  +       A+  GNT VIKPS F
Sbjct: 135 NILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P+GVTA ITP+NFPA +       A+A G T V+KP+
Sbjct: 145 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 9   PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           P+GVTA ITP+NFPA +       A+A G T V+KP+
Sbjct: 145 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+G+   I P+N+P     W    AI  GNT V KPS
Sbjct: 159 RDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPS 197

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSV 46
           R PLGV A ITPFN+P    +     +   GN  V+KPS+
Sbjct: 155 REPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSI 194

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSV 46
           R PLGV A ITPFN+P    +     +   GN  V+KPS+
Sbjct: 155 REPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSI 194

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSV 46
           R PLGV A ITPFN+P    +     +   GN  V+KPS+
Sbjct: 155 REPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSI 194

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           I + R P+G+   ITPFNFP  +       AIA GN  V  PS
Sbjct: 124 IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPS 166

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	70
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	3e-30
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	3e-30
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	2e-14
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	4e-14
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	4e-14
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	4e-14
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	4e-14
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-13
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	1e-13
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	7e-13
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	8e-13
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	8e-13
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	2e-12
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	3e-12
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	4e-12
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	7e-12
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	7e-12
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	8e-12
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	9e-12
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	1e-11
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	2e-11
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	2e-11
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	2e-11
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	2e-11
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	3e-11
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	3e-11
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	3e-11
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	3e-11
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	5e-11
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	2e-10
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	3e-10
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	4e-10
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	1e-09
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	2e-09
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-09
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	3e-09
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	7e-09
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-08
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	2e-08
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	2e-08
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	2e-08
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	1e-07
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	1e-07
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	2e-07
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	3e-07
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	6e-07

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  109 bits (274), Expect = 3e-30
 Identities = 27/45 (60%), Positives = 35/45 (77%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           ++  +YR P+GV  GI PFNFP M+P WMFP+AIA GNT ++KPS
Sbjct: 133 VEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPS 177

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  108 bits (273), Expect = 3e-30
 Identities = 29/45 (64%), Positives = 37/45 (82%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +D++S R P+G+ AGITPFNFP MIP+WMF  AIACGN  ++KPS
Sbjct: 154 IDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPS 198

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score = 64.5 bits (158), Expect = 2e-14
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              YRV  GV   I+P+NFP  + +     A+A GN  VIKP+
Sbjct: 142 NRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPA 184

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score = 63.7 bits (156), Expect = 4e-14
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             P+G+   IT FNFP  +  W   +A+ CGN  + K +
Sbjct: 155 WNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGA 193

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score = 63.8 bits (156), Expect = 4e-14
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
             +  P+GVT  I+P+NF   I +      I  GNT V+KP+
Sbjct: 167 RYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPA 208

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score = 63.9 bits (156), Expect = 4e-14
 Identities = 20/42 (47%), Positives = 23/42 (54%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           H +  P GV A I P+NFP  I + M   AI  GN  V KPS
Sbjct: 661 HYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPS 702

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 63.9 bits (156), Expect = 4e-14
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           H      GV   I  FNFP+         A+  G   ++KP+
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPA 187

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score = 62.6 bits (153), Expect = 1e-13
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 7   RVPLGVTAGITPFNFPAMIPLW-MFPVAIACGNTHVIKPS 45
             P GV A   P+NFP  +P   + P A+  GN  V KPS
Sbjct: 137 HKPHGVVAVFGPYNFPGHLPNGHIVP-ALLAGNCVVFKPS 175

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score = 62.6 bits (153), Expect = 1e-13
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            S+ VPLG    I P+NFP  I   M    +A GNT + KP+
Sbjct: 168 ESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPA 209

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score = 60.3 bits (147), Expect = 7e-13
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLW-MFPVAIACGNTHVIKPS 45
               R PLGV   I+PFN+P  +    + P A+  GNT V KP+
Sbjct: 146 ALVEREPLGVVLAISPFNYPVNLAAAKIAP-ALVTGNTVVFKPA 188

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score = 60.3 bits (147), Expect = 8e-13
 Identities = 18/39 (46%), Positives = 22/39 (56%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R PLGV A ITPFN+P    +     +   GN  V+KPS
Sbjct: 155 REPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPS 193

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score = 59.9 bits (146), Expect = 8e-13
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLW-MFPVAIACGNTHVIKPS 45
               R P+G+   I+PFN+P  +    + P A+  GN    KP 
Sbjct: 137 AVVRREPVGLVLAISPFNYPVNLAGSKIAP-ALIAGNVIAFKPP 179

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 3   IHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPS 45
              YR+PLGV + I+PFNFP  +    + P AIA GN+ V KP 
Sbjct: 137 NKIYRLPLGVISSISPFNFPMNLSMRSIAP-AIALGNSVVHKPD 179

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              +Y  R PLGV AGI  +N+P MI  W    A+ACGN  V KPS
Sbjct: 146 GAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score = 57.6 bits (140), Expect = 7e-12
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           D      R P+GV   ITP+NFP +I     P AI  G T V+KPS
Sbjct: 152 DRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPS 197

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score = 57.2 bits (139), Expect = 7e-12
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 12/49 (24%)

Query: 3   IHSYRVPLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPS 45
           I + R P+G+   ITPFNFP  +      P      AIA GN  V  PS
Sbjct: 124 IFTRREPVGIVGAITPFNFPLNLSAHKIAP------AIATGNVIVHHPS 166

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score = 57.2 bits (139), Expect = 8e-12
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 4   HSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
            +Y  RVPLGV  GI  +N+P  I  W    A+  GN  V KPS
Sbjct: 143 FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPS 186

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score = 57.1 bits (138), Expect = 9e-12
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 4   HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
                  GV   I+P+NFP  I L     A+  GN+ V KP+
Sbjct: 644 ALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPA 685

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              S   R PLGV A I P+N+P M+  W    A+A GN  V+KPS
Sbjct: 150 GHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 195

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score = 56.4 bits (137), Expect = 2e-11
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              S+  R P+GV   ITP+N+P ++  W    A+A G   ++KPS
Sbjct: 142 TFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPS 187

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score = 56.0 bits (136), Expect = 2e-11
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           D  S   + P+GV   ITP+N+P +   W    A+A G + V+KPS
Sbjct: 161 DTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPS 206

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 56.0 bits (136), Expect = 2e-11
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              S   R P+G+   I P+N+P M+  W    AI  GNT V KPS
Sbjct: 152 GHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPS 197

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score = 56.0 bits (136), Expect = 2e-11
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              +   + P+GV   + P+N+P M+  W     +A GNT VIKP+
Sbjct: 169 RNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA 214

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 55.8 bits (135), Expect = 3e-11
 Identities = 8/40 (20%), Positives = 16/40 (40%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              P+G+  GI P   P    ++   +++   N  +  P 
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPH 139

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 55.8 bits (135), Expect = 3e-11
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 3   IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +    VPLGV AG+ P   P    ++   ++I  GN+ V  P 
Sbjct: 102 VMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPH 144

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score = 55.6 bits (135), Expect = 3e-11
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           D   Y  RVP G    ITP+N P M+  W    A+A GNT V+KP+
Sbjct: 153 DWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPA 198

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score = 55.6 bits (135), Expect = 3e-11
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +  +Y    P+GV   I P+NFP ++ LW    A++CGNT V+KP+
Sbjct: 150 NFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score = 55.2 bits (134), Expect = 5e-11
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 2   DIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           D  SY    P+GV   I P+NFP ++  W    A+A GN  V+K +
Sbjct: 149 DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVA 194

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 3   IHSYRVPLGVTAGITPFNFP-AMIPLWMFPVAIACGNTHVIKPS 45
           I  ++  LGVT GI P+NFP  +I   M P A+  GNT VIKPS
Sbjct: 136 ILLFKRALGVTTGILPWNFPFFLIARKMAP-ALLTGNTIVIKPS 178

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 53.1 bits (128), Expect = 3e-10
 Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPS 45
           DI   ++ LG  A     NFP            A+A G   ++K  
Sbjct: 129 DIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 174

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score = 52.5 bits (127), Expect = 4e-10
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           R P+GV   I  +N P  + +     A+  G T V+KP+
Sbjct: 144 REPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPA 182

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           +  +GV+  ITP+NFP          A A G+  V+KPS
Sbjct: 137 KEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPS 175

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 50.6 bits (122), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 7   RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              +GV   ITP+N+P          A+  G T V+KPS
Sbjct: 159 YDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPS 197

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 50.8 bits (122), Expect = 2e-09
 Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 2   DIHSYRVPLGVTAGITPFNFPAMIPL--WMFPVAIACGNTHVIKPS 45
           +I   + P+G  A     NFP            A+A G   V+K  
Sbjct: 162 EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score = 49.9 bits (120), Expect = 3e-09
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 12/49 (24%)

Query: 3   IHSYRVPLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPS 45
           I+ ++VP GV  GIT +NFP A+      P      A+  GNT V+KP+
Sbjct: 142 IYIHKVPRGVVVGITAWNFPLALAGRKIGP------ALITGNTMVLKPT 184

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 12/49 (24%)

Query: 3   IHSYRVPLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPS 45
               + P+GV A ITP+NFP AMI            A+A G T V+KP+
Sbjct: 140 ALVLKQPIGVAAVITPWNFPSAMITRKVGA------ALAAGCTVVVKPA 182

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 12/43 (27%)

Query: 9   PLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPS 45
           P+GVTA ITP+NFP AMI     P      A+A G T V+KP+
Sbjct: 145 PIGVTAAITPWNFPAAMITRKAGP------ALAAGCTMVLKPA 181

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 12/43 (27%)

Query: 9   PLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPS 45
           P+GVTA ITP+NFP AMI     P      A+A G T +++P+
Sbjct: 168 PVGVTAAITPWNFPAAMITRKAAP------ALAAGCTMIVRPA 204

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 12/43 (27%)

Query: 9   PLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPS 45
           P+GV A ITP+NFP AMI     P      A+A G   V+KP+
Sbjct: 148 PIGVCAAITPWNFPAAMIARKVGP------ALAAGCPIVVKPA 184

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score = 47.6 bits (114), Expect = 2e-08
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 12/43 (27%)

Query: 9   PLGVTAGITPFNFP-AMI-----PLWMFPVAIACGNTHVIKPS 45
           P+GVT  I P+NFP  MI            A+A G   VIKP+
Sbjct: 147 PVGVTGLIVPWNFPIGMIAKKLSA------ALAAGCPSVIKPA 183

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
           YR   G  A I+PFNF A I   +       GN  + KPS
Sbjct: 197 YRGLEGFVAAISPFNFTA-IGGNLAGAPALMGNVVLWKPS 235

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 12/48 (25%)

Query: 9   PLGVTAGITPFNFPAMIPLWMF-----PVAIACGNTHVIKPS--VFQS 49
           PLGV   I P+NF    PLW       P  +  GN++++K +  V   
Sbjct: 126 PLGVILAIMPWNF----PLWQVLRGAVP-ILLAGNSYLLKHAPNVTGC 168

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score = 44.8 bits (107), Expect = 2e-07
 Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 12/48 (25%)

Query: 9   PLGVTAGITPFNFPAMIPLWMF-----PVAIACGNTHVIKPS--VFQS 49
             GV     P+NF    PL+       P     GN  ++K +  V  S
Sbjct: 123 STGVIMACEPWNF----PLYQVIRVFAP-NFIVGNPILLKHAHNVPGS 165

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 44.5 bits (106), Expect = 3e-07
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPS 45
           +  PLGV   I  +N+P    L + P+  AIA GN  V+KPS
Sbjct: 117 HSEPLGVVLVIGTWNYPFN--LTIQPMVGAIAAGNAVVLKPS 156

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 43.5 bits (103), Expect = 6e-07
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 4/42 (9%)

Query: 6   YRVPLGVTAGITPFNFPAMIPLWMFPV--AIACGNTHVIKPS 45
            + P GVT  I PFN+P    L + P+  AI  GNT +IKPS
Sbjct: 127 VQEPYGVTYIIGPFNYPVN--LTLTPLIGAIIGGNTCIIKPS 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	70
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.84
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	99.83
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	99.83
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	99.83
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	99.83
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	99.83
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	99.82
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	99.82
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	99.82
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	99.82
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	99.82
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	99.82
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	99.82
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	99.82
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	99.82
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	99.82
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	99.82
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	99.82
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	99.82
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	99.82
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	99.82
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	99.81
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	99.81
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	99.81
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	99.81
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	99.81
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.81
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	99.8
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	99.8
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	99.8
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	99.8
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	99.8
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	99.8
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	99.79
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	99.79
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	99.79
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	99.79
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	99.79
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	99.78
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	99.78
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.78
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	99.78
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	99.77
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	99.77
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	99.76
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	99.75
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	99.75
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	99.74
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	99.73
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	99.71
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	99.67
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	99.63

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=99.84  E-value=4.5e-21  Score=135.52  Aligned_cols=66  Identities=32%  Similarity=0.516  Sum_probs=60.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+||
T Consensus       136 ~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv  201 (490)
T 2wme_A          136 VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGV  201 (490)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTS
T ss_pred             eeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCc
Confidence            578999999999999999999999999999999999999999999999976666666667999987

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=99.83  E-value=1.2e-20  Score=134.09  Aligned_cols=66  Identities=26%  Similarity=0.427  Sum_probs=60.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+||
T Consensus       164 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gv  229 (520)
T 3ed6_A          164 SKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGT  229 (520)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTS
T ss_pred             ccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCe
Confidence            578999999999999999999999999999999999999999999999976666666667999986

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=99.83  E-value=1.4e-20  Score=133.67  Aligned_cols=66  Identities=26%  Similarity=0.455  Sum_probs=60.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       172 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gv  237 (517)
T 2o2p_A          172 TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGV  237 (517)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTS
T ss_pred             EEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCe
Confidence            478999999999999999999999999999999999999999999999976666666667999986

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=99.83  E-value=1.9e-20  Score=132.40  Aligned_cols=66  Identities=30%  Similarity=0.548  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+.++++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       145 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  210 (503)
T 3iwj_A          145 SHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGV  210 (503)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTS
T ss_pred             ceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCe
Confidence            578999999999999999999999999999999999999999999999976665555567999986

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=99.83  E-value=2.4e-20  Score=131.89  Aligned_cols=66  Identities=26%  Similarity=0.431  Sum_probs=60.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       152 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  217 (500)
T 1o04_A          152 SYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV  217 (500)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTS
T ss_pred             EEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCe
Confidence            478999999999999999999999999999999999999999999999976666666667999986

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=99.83  E-value=2.2e-20  Score=132.31  Aligned_cols=66  Identities=29%  Similarity=0.448  Sum_probs=60.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+||
T Consensus       162 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv  227 (504)
T 3ek1_A          162 LTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGV  227 (504)
T ss_dssp             EEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTT
T ss_pred             ceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCccc
Confidence            578999999999999999999999999999999999999999999999976666665667999987

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=99.82  E-value=2.7e-20  Score=131.69  Aligned_cols=66  Identities=30%  Similarity=0.552  Sum_probs=60.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       153 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  218 (501)
T 1bxs_A          153 TYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGV  218 (501)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTS
T ss_pred             eeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcce
Confidence            478999999999999999999999999999999999999999999999976666666667999986

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=99.82  E-value=1.8e-20  Score=132.11  Aligned_cols=66  Identities=29%  Similarity=0.420  Sum_probs=60.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+||
T Consensus       142 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  207 (484)
T 3ifg_A          142 IVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGV  207 (484)
T ss_dssp             EEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTS
T ss_pred             eEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCccc
Confidence            578999999999999999999999999999999999999999999999976666666667999986

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=99.82  E-value=3e-20  Score=131.41  Aligned_cols=66  Identities=35%  Similarity=0.515  Sum_probs=59.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+++
T Consensus       149 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gv  214 (503)
T 1a4s_A          149 AYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGL  214 (503)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTS
T ss_pred             eEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCe
Confidence            578999999999999999999999999999999999999999999999976665555567999986

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=99.82  E-value=3.2e-20  Score=132.03  Aligned_cols=66  Identities=35%  Similarity=0.429  Sum_probs=60.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       155 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gv  220 (528)
T 3u4j_A          155 GLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGV  220 (528)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTS
T ss_pred             eEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCe
Confidence            578999999999999999999999999999999999999999999999976666555667999986

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=99.82  E-value=2.3e-20  Score=132.24  Aligned_cols=66  Identities=30%  Similarity=0.380  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       167 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gv  232 (516)
T 1uzb_A          167 NESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV  232 (516)
T ss_dssp             EEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTS
T ss_pred             EEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCe
Confidence            478899999999999999999999999999999999999999999999976666666667999986

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=99.82  E-value=2.8e-20  Score=131.72  Aligned_cols=66  Identities=30%  Similarity=0.346  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       146 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gv  211 (505)
T 3prl_A          146 ALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGI  211 (505)
T ss_dssp             EEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTS
T ss_pred             eEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCe
Confidence            477899999999999999999999999999999999999999999999976655555557999986

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=99.82  E-value=2.9e-20  Score=131.41  Aligned_cols=66  Identities=23%  Similarity=0.197  Sum_probs=59.8

Q ss_pred             eeeE-eeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSY-RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~-~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++ ++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+||
T Consensus       154 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gv  220 (497)
T 3i44_A          154 QAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGV  220 (497)
T ss_dssp             SCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTS
T ss_pred             eEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCe
Confidence            4677 99999999999999999999999999999999999999999999976666666667999986

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=99.82  E-value=3.3e-20  Score=131.00  Aligned_cols=66  Identities=21%  Similarity=0.297  Sum_probs=59.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       140 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gv  205 (495)
T 3b4w_A          140 SIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGV  205 (495)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTS
T ss_pred             EEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCe
Confidence            478999999999999999999999999999999999999999999999976555555557999986

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=99.82  E-value=3.6e-20  Score=131.63  Aligned_cols=66  Identities=47%  Similarity=0.849  Sum_probs=59.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       156 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gv  221 (521)
T 4e4g_A          156 MYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGI  221 (521)
T ss_dssp             EEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTS
T ss_pred             eeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCe
Confidence            578999999999999999999999999999999999999999999999966555555567999986

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=99.82  E-value=4e-20  Score=130.27  Aligned_cols=66  Identities=27%  Similarity=0.365  Sum_probs=60.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+++
T Consensus       140 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  205 (487)
T 2w8n_A          140 ALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGV  205 (487)
T ss_dssp             EEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTS
T ss_pred             eEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCe
Confidence            478899999999999999999999999999999999999999999999976666666667999986

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=99.82  E-value=3.9e-20  Score=131.82  Aligned_cols=66  Identities=26%  Similarity=0.338  Sum_probs=59.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       166 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gv  231 (538)
T 3qan_A          166 NRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV  231 (538)
T ss_dssp             EEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTS
T ss_pred             eeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCe
Confidence            578999999999999999999999999999999999999999999999966555555557999986

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=99.82  E-value=4.4e-20  Score=130.31  Aligned_cols=66  Identities=30%  Similarity=0.377  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       142 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gv  207 (497)
T 3k2w_A          142 IYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV  207 (497)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTS
T ss_pred             eeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCe
Confidence            578899999999999999999999999999999999999999999999976666555667999986

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=99.82  E-value=3.3e-20  Score=130.81  Aligned_cols=67  Identities=18%  Similarity=0.222  Sum_probs=60.6

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       116 ~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  182 (484)
T 3ros_A          116 NAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGS  182 (484)
T ss_dssp             EEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTS
T ss_pred             eeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCe
Confidence            3578999999999999999999999999999999999999999999999976666666667999986

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=99.82  E-value=3.4e-20  Score=131.43  Aligned_cols=66  Identities=33%  Similarity=0.505  Sum_probs=59.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       156 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gv  221 (515)
T 2d4e_A          156 YYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGV  221 (515)
T ss_dssp             EEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTS
T ss_pred             eEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCe
Confidence            478999999999999999999999999999999999999999999999976655555567999986

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=99.82  E-value=5.2e-20  Score=130.68  Aligned_cols=66  Identities=30%  Similarity=0.458  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..+..+...+|+|+|+
T Consensus       144 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gv  209 (517)
T 3r31_A          144 AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL  209 (517)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTS
T ss_pred             ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCccc
Confidence            478999999999999999999999999999999999999999999999976666665667999986

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=99.81  E-value=5.4e-20  Score=130.07  Aligned_cols=66  Identities=30%  Similarity=0.411  Sum_probs=59.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+++
T Consensus       151 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gv  216 (501)
T 1uxt_A          151 GLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDA  216 (501)
T ss_dssp             EEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTS
T ss_pred             EEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCe
Confidence            478999999999999999999999999999999999999999999999976655555557999986

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=99.81  E-value=6.3e-20  Score=129.17  Aligned_cols=66  Identities=42%  Similarity=0.784  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       135 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  200 (486)
T 1t90_A          135 AANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV  200 (486)
T ss_dssp             EEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTS
T ss_pred             eEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCE
Confidence            467899999999999999999999999999999999999999999999976655555567999986

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=99.81  E-value=7.1e-20  Score=128.64  Aligned_cols=66  Identities=33%  Similarity=0.491  Sum_probs=59.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       136 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  201 (479)
T 2imp_A          136 ILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGV  201 (479)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTS
T ss_pred             eEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCe
Confidence            478999999999999999999999999999999999999999999999976666655667999986

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=99.81  E-value=8.4e-20  Score=128.16  Aligned_cols=65  Identities=23%  Similarity=0.274  Sum_probs=59.4

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      +++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+++
T Consensus       138 ~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gv  202 (475)
T 1euh_A          138 VVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGV  202 (475)
T ss_dssp             EEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTT
T ss_pred             EEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCe
Confidence            78999999999999999999999999999999999999999999999976666555567999986

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=99.81  E-value=1.1e-19  Score=127.77  Aligned_cols=66  Identities=30%  Similarity=0.427  Sum_probs=59.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+++
T Consensus       139 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gv  204 (481)
T 3jz4_A          139 LIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGV  204 (481)
T ss_dssp             EEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTT
T ss_pred             EEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCe
Confidence            468899999999999999999999999999999999999999999999976666555567999986

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=99.80  E-value=5.1e-20  Score=130.46  Aligned_cols=66  Identities=26%  Similarity=0.327  Sum_probs=58.4

Q ss_pred             eeeEe-eeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYR-VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~-~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .++++ +|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+|+
T Consensus       140 ~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gv  206 (506)
T 3rh9_A          140 TWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGM  206 (506)
T ss_dssp             EEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTS
T ss_pred             eeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhh
Confidence            46778 9999999999999999999999999999999999999999999965555444456899986

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=99.80  E-value=9.6e-20  Score=128.49  Aligned_cols=66  Identities=30%  Similarity=0.413  Sum_probs=59.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh----cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM----SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~----g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+    |+|+++
T Consensus       124 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gv  193 (486)
T 3pqa_A          124 IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGV  193 (486)
T ss_dssp             EEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred             eEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCe
Confidence            578999999999999999999999999999999999999999999999976555555556    899875

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=99.80  E-value=1.5e-19  Score=126.40  Aligned_cols=66  Identities=21%  Similarity=0.237  Sum_probs=59.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|+|+++
T Consensus       120 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv  185 (462)
T 3etf_A          120 AVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGV  185 (462)
T ss_dssp             EEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTT
T ss_pred             eEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCe
Confidence            578999999999999999999999999999999999999999999999965555555556999986

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=99.80  E-value=1.8e-19  Score=126.55  Aligned_cols=65  Identities=25%  Similarity=0.305  Sum_probs=56.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+|||++|+|||||+.+..+++++||++||+||+||||.+|+++.....+... ++|+++
T Consensus       114 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~-alP~gv  178 (469)
T 3sza_A          114 LYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ-YLDKDL  178 (469)
T ss_dssp             EEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH-HSCTTT
T ss_pred             ceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH-hCCcce
Confidence            57899999999999999999999999999999999999999999999995443333322 488876

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=99.80  E-value=1.8e-19  Score=127.39  Aligned_cols=65  Identities=29%  Similarity=0.474  Sum_probs=56.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+ +|+|+
T Consensus       155 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv  219 (498)
T 4f3x_A          155 SMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGV  219 (498)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTS
T ss_pred             ceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCe
Confidence            578999999999999999999999999999999999999999999999954444433334 88875

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=99.80  E-value=1.1e-19  Score=127.63  Aligned_cols=66  Identities=23%  Similarity=0.348  Sum_probs=56.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+|.|++|
T Consensus       120 ~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv  185 (474)
T 4h7n_A          120 LQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDV  185 (474)
T ss_dssp             EEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTT
T ss_pred             ceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccc
Confidence            356789999999999999999999999999999999999999999999954444433345788876

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=99.79  E-value=2.4e-19  Score=126.31  Aligned_cols=66  Identities=27%  Similarity=0.347  Sum_probs=59.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       133 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv  198 (490)
T 3ju8_A          133 AVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGV  198 (490)
T ss_dssp             EEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTT
T ss_pred             eeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCe
Confidence            356799999999999999999999999999999999999999999999976555555567999986

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=99.79  E-value=2.6e-19  Score=126.68  Aligned_cols=66  Identities=29%  Similarity=0.379  Sum_probs=59.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchh-hHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFV-TSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~-~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++ .....+...+|+|+++
T Consensus       142 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gv  208 (508)
T 3r64_A          142 NRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGV  208 (508)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTT
T ss_pred             eEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCe
Confidence            57899999999999999999999999999999999999999999999996 5555555557899886

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=99.79  E-value=2.3e-19  Score=125.91  Aligned_cols=66  Identities=24%  Similarity=0.268  Sum_probs=59.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.++++++||++||+||+|||+.+|+++.....+...+|+|+++
T Consensus       133 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gv  198 (478)
T 3ty7_A          133 DLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGV  198 (478)
T ss_dssp             EEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTT
T ss_pred             ceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCe
Confidence            578999999999999999999999999999999999999999999999976665555567999986

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=99.79  E-value=2.5e-19  Score=125.92  Aligned_cols=66  Identities=33%  Similarity=0.464  Sum_probs=59.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchh-hHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFV-TSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~-~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++ .....+...+|+|+++
T Consensus       137 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gv  203 (485)
T 4dng_A          137 NKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGV  203 (485)
T ss_dssp             EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTS
T ss_pred             EEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCe
Confidence            47899999999999999999999999999999999999999999999996 5555555667999986

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=99.79  E-value=2.6e-19  Score=126.53  Aligned_cols=64  Identities=34%  Similarity=0.591  Sum_probs=56.3

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc-CCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS-HPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g-~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++  ..+.+++.. +|+|+
T Consensus       153 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~--~~l~~l~~ealP~gv  217 (495)
T 1wnd_A          153 SMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA--LKLAELAKDIFPAGV  217 (495)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH--HHHHHHHTTTSCTTS
T ss_pred             eEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHH--HHHHHHHHHhCCcCe
Confidence            47889999999999999999999999999999999999999999999995  555555543 78775

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=99.78  E-value=2e-19  Score=127.05  Aligned_cols=64  Identities=28%  Similarity=0.444  Sum_probs=55.7

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH------hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV------MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~------~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||.+|+++..  +.+++      +|+|+|+
T Consensus       151 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~--l~~l~~~al~~aGlP~gv  220 (500)
T 2j6l_A          151 LIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA--VTKIIAKVLEDNKLPGAI  220 (500)
T ss_dssp             EEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH--HHHHHHHHHHHTTCCGGG
T ss_pred             eEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHH--HHHHHHHHHHhhcCCcCe
Confidence            3678999999999999999999999999999999999999999999999543  33332      4899875

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=99.78  E-value=5.2e-19  Score=123.66  Aligned_cols=65  Identities=31%  Similarity=0.348  Sum_probs=56.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+ +|+|+
T Consensus       124 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gv  188 (457)
T 3lns_A          124 CYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEY  188 (457)
T ss_dssp             EEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTT
T ss_pred             eEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhh
Confidence            578999999999999999999999999999999999999999999999964444333333 88876

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=99.78  E-value=3.6e-19  Score=134.23  Aligned_cols=66  Identities=33%  Similarity=0.389  Sum_probs=60.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ++++++|+||+++|+|||||+.+..+++++||++||+||+||||++|+++.....+...+|+|+||
T Consensus       660 ~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gv  725 (1026)
T 4f9i_A          660 NHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGV  725 (1026)
T ss_dssp             EEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTS
T ss_pred             ceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCe
Confidence            467899999999999999999999999999999999999999999999976666666667999987

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=99.78  E-value=3.6e-19  Score=126.45  Aligned_cols=66  Identities=23%  Similarity=0.224  Sum_probs=58.5

Q ss_pred             eeeEeeec-cEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhc-CCCCC
Q psy10614          3 IHSYRVPL-GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMS-HPPNI   68 (70)
Q Consensus         3 ~~~~~~P~-Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g-~p~~v   68 (70)
                      .++.++|+ ||+++|+|||||+.+..+++++||++||+||+||||.+|+++.....+...+| +|+|+
T Consensus       144 ~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gv  211 (534)
T 2y53_A          144 AQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGA  211 (534)
T ss_dssp             EEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTS
T ss_pred             ceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCe
Confidence            36789997 99999999999999999999999999999999999999999765555555678 79986

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=99.77  E-value=8.5e-19  Score=131.99  Aligned_cols=66  Identities=24%  Similarity=0.252  Sum_probs=59.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+||||++|+++.....+...+|+|+++
T Consensus       643 ~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gv  708 (1001)
T 3haz_A          643 NALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSA  708 (1001)
T ss_dssp             EEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTT
T ss_pred             eEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCc
Confidence            467899999999999999999999999999999999999999999999965555555557999986

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=99.77  E-value=3.1e-19  Score=126.23  Aligned_cols=64  Identities=20%  Similarity=0.199  Sum_probs=55.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhh--hHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH------hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIP--LWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV------MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~--~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~------~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.  .+++++||++||+||+||||.+|+++.  .+.+++      +|+|+|+
T Consensus       130 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~--~l~~l~~~al~~aGlP~gv  201 (510)
T 1ez0_A          130 IRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQ--IVAECIEQALKQEQLPQAI  201 (510)
T ss_dssp             EEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHH--HHHHHHHHHHHHHTCCGGG
T ss_pred             ceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHH--HHHHHHHHHHHHhCCCCCe
Confidence            468999999999999999999884  499999999999999999999999954  444443      6899875

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=99.76  E-value=6.3e-19  Score=125.09  Aligned_cols=66  Identities=20%  Similarity=0.134  Sum_probs=55.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhh--HHHHHHhhcCCEEEEecCCCCcchhhHHHHH----HHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPL--WMFPVAIACGNTHVIKPSVFQSSFVTSTKYF----KVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~--~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~----~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.+  +++++||++||+||+|||+.+|+++.....+    ...+|+|+|+
T Consensus       163 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gv  234 (528)
T 3v4c_A          163 IRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGV  234 (528)
T ss_dssp             EEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred             ceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCe
Confidence            4679999999999999999998754  8999999999999999999999995443322    1236999876

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=99.75  E-value=2.2e-18  Score=120.73  Aligned_cols=66  Identities=24%  Similarity=0.322  Sum_probs=56.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHH----HHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTK----YFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~----~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|.++....    .+...+|+|+++
T Consensus       102 ~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gv  171 (464)
T 3k9d_A          102 VMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGA  171 (464)
T ss_dssp             EEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTS
T ss_pred             eEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCe
Confidence            567899999999999999999999999999999999999999999999964422    122346899986

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=99.75  E-value=1.7e-18  Score=120.87  Aligned_cols=64  Identities=17%  Similarity=0.309  Sum_probs=56.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH------HhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV------VMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~------~~g~p~~v   68 (70)
                      .++.++|+||+++|+|||||+....+++.+||++||+||+|||+.+|.++.  .+.++      .+|+|+++
T Consensus        97 ~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~--~~~~~~~~a~~~aG~P~gv  166 (452)
T 3my7_A           97 TMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTN--DAAKLVLDAAVAAGAPKDI  166 (452)
T ss_dssp             CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHH--HHHHHHHHHHHHTTCCTTS
T ss_pred             eEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHH--HHHHHHHHHHHHcCCCcCc
Confidence            467899999999999999999999999999999999999999999999953  33333      46999986

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=99.74  E-value=2.8e-18  Score=123.00  Aligned_cols=64  Identities=31%  Similarity=0.292  Sum_probs=56.9

Q ss_pred             eeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          4 HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         4 ~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      +++++|+|||++|+|||||+....++++++| +||+||+|||+.+|+++..+..+...+|+|+||
T Consensus       195 ~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gv  258 (563)
T 4e3x_A          195 TVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNI  258 (563)
T ss_dssp             EECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTS
T ss_pred             EEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCe
Confidence            5567788999999999999999999999999 599999999999999976666666667999987

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=99.73  E-value=9.1e-18  Score=117.99  Aligned_cols=64  Identities=16%  Similarity=0.136  Sum_probs=55.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHH----H----hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKV----V----MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~----~----~g~p~~v   68 (70)
                      .+++++|+||+++|+||| | .+..+++++||++||+||+||||.+|+++.....+..    .    +|+|+|+
T Consensus       120 ~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gv  191 (468)
T 1vlu_A          120 LYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGS  191 (468)
T ss_dssp             EEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTS
T ss_pred             eEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCc
Confidence            478899999999999999 9 8899999999999999999999999999644333331    3    7999986

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=99.71  E-value=1.8e-17  Score=115.64  Aligned_cols=64  Identities=19%  Similarity=0.236  Sum_probs=54.2

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHH----HHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFK----VVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~----~~~g~p~~v   68 (70)
                      .+++++|+|||++|+||| | .+..+++++||++||+||+||||.+|+++.....+.    ..+|+|+|+
T Consensus       131 ~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gv  198 (444)
T 4ghk_A          131 VGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDT  198 (444)
T ss_dssp             EEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred             ceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCccc
Confidence            578999999999999998 8 578899999999999999999999999964443332    357899875

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=99.67  E-value=8.1e-17  Score=113.04  Aligned_cols=63  Identities=21%  Similarity=0.218  Sum_probs=51.4

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHh----cCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVM----SHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~----g~p~~v   68 (70)
                      .+++++|+||+++|+||| |+... +++++||++||+||+||||.+|+++..+..+...+    | |+|+
T Consensus       134 ~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gv  200 (463)
T 2h5g_A          134 LEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEA  200 (463)
T ss_dssp             EEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGG
T ss_pred             eEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCe
Confidence            468899999999999776 76655 79999999999999999999999965554444444    7 7764

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=99.63  E-value=3.7e-16  Score=108.58  Aligned_cols=62  Identities=18%  Similarity=0.167  Sum_probs=52.6

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH------hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV------MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~------~g~p~~v   68 (70)
                      .+++++|+||+++|+|||  ..+..+++++||++||+||+||||.+|+++  ..+.+++      +|+|+++
T Consensus       119 ~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~--~~l~~l~~~al~eaGlP~gv  186 (427)
T 1o20_A          119 IARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN--KAIVSAIREALKETEIPESS  186 (427)
T ss_dssp             EEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH--HHHHHHHHHHHTTSSSCGGG
T ss_pred             eEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH--HHHHHHHHHHHHHcCCCccc
Confidence            467899999999999987  367889999999999999999999999995  4445544      4889875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	70
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-11
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	8e-10
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-05
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	2e-04

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 53.9 bits (129), Expect = 4e-11
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              ++   P+GV   I P+NFP ++ LW    A++CGNT V+KP+
Sbjct: 144 FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 188

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 8e-10
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              ++   P+GV   I P+NFP ++  W    A+A GN  V+K +
Sbjct: 144 FFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVA 188

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score = 37.4 bits (86), Expect = 3e-05
 Identities = 22/45 (48%), Positives = 27/45 (60%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              ++ R PLGV AGI  +N+P MI  W    A+ACGN  V KPS
Sbjct: 147 AFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 2e-04
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
                 R PLGV A I P+N+P M+  W    A+A GN  V+KPS
Sbjct: 130 HTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 174

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	70
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	99.82
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	99.81
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	99.78
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	99.77
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	99.77
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	99.71
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	99.7
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	99.69
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	99.68
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	99.55
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.05

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.82  E-value=1.4e-20  Score=130.44  Aligned_cols=67  Identities=30%  Similarity=0.522  Sum_probs=60.3

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..+++++|+||+++|+|||||+.+.++++++||++||+||+||||.+|+++.....+...+|+|+||
T Consensus       145 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv  211 (494)
T d1bxsa_         145 FTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGV  211 (494)
T ss_dssp             EEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTS
T ss_pred             eeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCe
Confidence            3578899999999999999999999999999999999999999999999976665555567999986

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.81  E-value=5.5e-20  Score=127.61  Aligned_cols=67  Identities=25%  Similarity=0.402  Sum_probs=59.6

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..+++++|+||+++|+|||||+.+..++++++|++||+||+||||.+|.++.....+...+|+|+|+
T Consensus       145 ~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv  211 (494)
T d1o04a_         145 FSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV  211 (494)
T ss_dssp             EEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTS
T ss_pred             eeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCe
Confidence            3578999999999999999999999999999999999999999999999965555555557999987

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=99.78  E-value=3.6e-19  Score=123.87  Aligned_cols=67  Identities=34%  Similarity=0.485  Sum_probs=59.3

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..+++++|+||+++|+|||||+.+..+++++||++||+||+|||+.+|+++.....+...+|+|+|+
T Consensus       148 ~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv  214 (503)
T d1a4sa_         148 FAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGL  214 (503)
T ss_dssp             EEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTS
T ss_pred             ccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCe
Confidence            3678999999999999999999999999999999999999999999999965544444457999986

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=6.1e-19  Score=121.58  Aligned_cols=65  Identities=34%  Similarity=0.562  Sum_probs=57.0

Q ss_pred             ceeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          2 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         2 ~~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      ..+++++|+||+++|+|||||+.+.++++++||++||+||+|||+.+|+++  ..+.+++ .++|+|+
T Consensus       131 ~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~--~~~~~l~~~~lP~gv  196 (474)
T d1wnda_         131 TSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA--LKLAELAKDIFPAGV  196 (474)
T ss_dssp             EEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH--HHHHHHHTTTSCTTS
T ss_pred             ceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHH--HHHHHHHHHhCCCCc
Confidence            357899999999999999999999999999999999999999999999995  4445555 4688876

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.77  E-value=4.7e-19  Score=123.37  Aligned_cols=66  Identities=30%  Similarity=0.380  Sum_probs=59.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+.+.++++.++|++||+||+|||+.+|+++.....+...+|+|+||
T Consensus       167 ~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv  232 (516)
T d1uzba_         167 NESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV  232 (516)
T ss_dssp             EEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTS
T ss_pred             eeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCe
Confidence            467899999999999999999999999999999999999999999999976666665668999986

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=99.71  E-value=1.7e-17  Score=113.54  Aligned_cols=66  Identities=23%  Similarity=0.266  Sum_probs=59.8

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....++++++|++||++|+|||+.+|.+++....+...+|+|+++
T Consensus       136 ~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv  201 (474)
T d1euha_         136 AVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGV  201 (474)
T ss_dssp             EEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTT
T ss_pred             eEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCe
Confidence            467899999999999999999999999999999999999999999999976666665567999986

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=99.70  E-value=2.8e-17  Score=113.75  Aligned_cols=66  Identities=30%  Similarity=0.411  Sum_probs=58.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      .+++|+|+||+++|+|||||+.+.++++++||++||+||+|||+.++.++.....+....|.|.++
T Consensus       149 ~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~  214 (499)
T d1ky8a_         149 GLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDA  214 (499)
T ss_dssp             EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTS
T ss_pred             ceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhhhhhhcccccccccccee
Confidence            568999999999999999999999999999999999999999999999976666666667777765

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=99.69  E-value=1.1e-17  Score=116.25  Aligned_cols=66  Identities=20%  Similarity=0.141  Sum_probs=53.0

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhh--hHHHHHHhhcCCEEEEecCCCCcchhhHHH----HHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIP--LWMFPVAIACGNTHVIKPSVFQSSFVTSTK----YFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~--~~~~~~al~~GN~vv~Kps~~tp~~~~~~~----~~~~~~g~p~~v   68 (70)
                      .+.+++|+||+++|+|||||+...  .++++++|++||+||+||||.+|.++....    .+...+|+|+||
T Consensus       126 ~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv  197 (504)
T d1ez0a_         126 IRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAI  197 (504)
T ss_dssp             EEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred             eeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCc
Confidence            466888999999999999998643  469999999999999999999999954321    122245999876

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=6.4e-17  Score=110.89  Aligned_cols=64  Identities=23%  Similarity=0.346  Sum_probs=54.5

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHH-hcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVV-MSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~-~g~p~~v   68 (70)
                      .+++++|+||+++|+|||||+....++++++|++||+||+|||+.+|.++  ..+.+++ .+.|+++
T Consensus        96 ~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~--~~~~~~~~~~~~~~~  160 (446)
T d1ad3a_          96 LYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMA--DLLATLIPQYMDQNL  160 (446)
T ss_dssp             EEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHH--HHHHHHHHHHSCTTT
T ss_pred             eEEEeecceeEecccccccccccccccccccchhcccccccccceecccc--ccccccccccccccc
Confidence            46789999999999999999999999999999999999999999999995  4444444 3566554

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.55  E-value=1.7e-15  Score=102.36  Aligned_cols=66  Identities=11%  Similarity=-0.022  Sum_probs=54.1

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHHHHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYFKVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~~~~~g~p~~v   68 (70)
                      ..++++|+|+++++.|||||+.+..+++.++|++||++|+|||+.+|.++.....+...++.|.++
T Consensus       104 ~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~  169 (414)
T d1o20a_         104 LRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEI  169 (414)
T ss_dssp             CEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSS
T ss_pred             cceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhccc
Confidence            356788999999999999999999999999999999999999999999954444333334555554

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=2.1e-10  Score=78.41  Aligned_cols=64  Identities=16%  Similarity=0.132  Sum_probs=48.9

Q ss_pred             eeeEeeeccEEEEEcCCChhhhhhhHHHHHHhhcCCEEEEecCCCCcchhhHHHHH--------HHHhcCCCCC
Q psy10614          3 IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSVFQSSFVTSTKYF--------KVVMSHPPNI   68 (70)
Q Consensus         3 ~~~~~~P~Gv~~~i~p~n~P~~~~~~~~~~al~~GN~vv~Kps~~tp~~~~~~~~~--------~~~~g~p~~v   68 (70)
                      .+..+.|+||+++| ++++| .....+...+|.+||++|+||++.++.|+..+..+        ....|+|+++
T Consensus       109 ~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~  180 (436)
T d1vlua_         109 LYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGS  180 (436)
T ss_dssp             EEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTS
T ss_pred             EEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCce
Confidence            35678899999887 66777 45667888899999999999999999995443221        2345899876